1      -     51
UN14010        --> GTAATTGCAATCTTTCAGCTTCCCAATTCTAGCGTTGTAAACACAGTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX746442       <-- ...........................................ttttttt
EX762350       <-- ............................................tttttt
EX773586       <-- ..................................................
EW715438       <-- ..................................................
EY922313       <-- ..................................................
EX769922       <-- ..................................................
FD559827       <-- ..................................................
FD533887       <-- ..................................................
EY898557       <-- ..................................................
EY894256       --> GTAATTGCAATCTTTCAGCTTCCCAATTCTAGCGTTGTAAACACAGTAAA
EX766625       --> ..................................................
EX777388       --> ..................................................
FD547886       --> ..................................................
EY918296       --> ..................................................
FD555466       --> ..................................................
EW720039       --> ..................................................
FD529946       --> ..................................................
EX750844       --> ..................................................

               51     -    101
UN14010        --> TAGCTGGATAATAATAATGCTTAAGCAGAGCATCTAAGTTGCTCGATTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX746442       <-- TAGCTGGATAATAATAATGCTTAAGCAGAGCATCTAAGTTGCTCGATTAT
EX762350       <-- ttGCTGGATAATAATAATGCTTAAGCAGAGCATCTAAGTTGCTCGATTAT
EX773586       <-- ..GCTGGATAATAATAATGCTTAAGCAGAGCATCTAAGTTGCTCGATTAT
EW715438       <-- .........gATAATAATGCTTAAGCAGAGCATCTAAGTTGCTCGATTAT
EY922313       <-- ............AATAATGCTTAAGCAGAGCATCTAAGTTGCTCGATTAT
EX769922       <-- ..................GCTTAAGCATAGCATCTAAGTTGCTCGATTAT
FD559827       <-- ................taGCTTAAGCAGAGCATCTAAGTTGCTCGATTAT
FD533887       <-- ..................................................
EY898557       <-- ..................................................
EY894256       --> TAGCCGGATAATAATAATGCTTAAGCATAGCATCTAAGTTGCTCGATTAT
EX766625       --> ..GCTGGATAATAATAATGCTTAAGCAGAGCATCTAAGTTGCTCGATTAT
EX777388       --> ..GCTGGATAATAATAATGCTTAAGCAGAGCATCTAAGTTGCTCGATTAT
FD547886       --> ..GCTGGATAATAATAATGCTTAAGCAGAGCATCTAAGTTGCTCGATTAT
EY918296       --> ............AATAATGCTTAAGCAGAGCATCTAAGTTGCTCGATTAT
FD555466       --> .................aGCTTAAGCAGAGCATCTAAGTTGCTCGATTAT
EW720039       --> ....................TTAAGCAGAGCATCTAAGTTGCTCGATTAT
FD529946       --> ..................................................
EX750844       --> ..................................................

               101    -    151
UN14010        --> GATCACATAAAGTAGCGTTTTCCAAACCCCAACACATGCATTTTTTCTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX746442       <-- GATCACATAAAGTAGCGTTTTCCAAACCCCAACACATGCATTTCTTCTTA  Raphanus raphanistrum subsp. maritimus
EX762350       <-- GATCACATAAAGTAGCGTTTTCCAAACCC-AACACATGCATTTTTTCTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773586       <-- GATCACATAAAGTAGCGTTTTCCAAACCCCAACACATGCATTTTT-CTTA  Raphanus raphanistrum subsp. landra
EW715438       <-- GATCACATAAAGTAGCGTTTTCCAAACCCCAACACATGCATTTCTTCTTA  Raphanus sativus var. oleiformis
EY922313       <-- GATCACATAAAGTAGCGTTTTCCAAACCCCAACACATGCATTTTTTCTTA  Raphanus raphanistrum subsp. landra
EX769922       <-- GATCACATAAAGTAGCGTTTTCCAAACCTCAACACATGCATTTCTTCTTA  Raphanus raphanistrum subsp. landra
FD559827       <-- GATCACATAAAGTAGCGTTTTCCAAACCCCAACACATGCATTTTTTCTTA  Raphanus raphanistrum subsp. landra
FD533887       <-- .....................CCAAACCCCAACACATGCATTTCTTCTTA  Raphanus raphanistrum subsp. maritimus
EY898557       <-- ...............................ACACATGCATTTCTTCTTA  Raphanus raphanistrum subsp. maritimus
EY894256       --> GATCACACAAAGTAGCGTTTTCCAAACCCCAACACATGCATTTATTCTTA  Raphanus raphanistrum subsp. maritimus
EX766625       --> GATCACATAAAGTAGCGTTTTCCAAACCC-AACACATGCATTTTTTCTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777388       --> GATCACATAAAGTAGCGTTTTCCAAACCCCAACACATGCATTTTTTCTTA  Raphanus raphanistrum subsp. landra
FD547886       --> GATCACATAAAGTAGCGTTTTCCAAACCCCAACACATGCATTTTTTCTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY918296       --> GATCACATAAAGTAGCGTTTTCCAAACCCCAACACATGCATTTTTTCTTA  Raphanus raphanistrum subsp. landra
FD555466       --> GATCACATAAAGTAGCGTTTTCCAAACCCCAACACATGCATTTTTTCTTA  Raphanus raphanistrum subsp. landra
EW720039       --> GATCACATAAAGTAGCGTTTTCCAAACCCCAACACATGCATTTCTTCTTA  Raphanus sativus var. oleiformis
FD529946       --> .....................CCAAACCCCAACACATGCATTTCTTCTTA  Raphanus raphanistrum subsp. maritimus
EX750844       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               151    -    201
UN14010        --> AAATTTTAAAATATTTGGATGCAGAATAACATTAACACTTTGGCTTCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX746442       <-- AAGTTTTAAAATATTTGGATGCAGAATAACATTAACACTTTGGCTTCTCT  Raphanus raphanistrum subsp. maritimus
EX762350       <-- AAATTTTAAAATATTTGGATGCAGAATAACATTAACACTTTGGCTTCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773586       <-- AAATTTTAAAATATTTGGATGCAGAATAACATTAACACTTCGGCTTCTCT  Raphanus raphanistrum subsp. landra
EW715438       <-- AAGTTTTAAAATATTTGGATGCAGAATAACATTAACACTTTGGCTTCTCT  Raphanus sativus var. oleiformis
EY922313       <-- AAATTTTAAAATATTTGGATGCAGAATAACATTAACACTTCGGCTTCTCT  Raphanus raphanistrum subsp. landra
EX769922       <-- AAGTTTTAAAATATTTGGATGCAGAATAACATTAACACTTTGGCTTCTCT  Raphanus raphanistrum subsp. landra
FD559827       <-- AAATTTTAAAATATTTGGATGCAGAATAACATTAACACT-CGGCTTCTCT  Raphanus raphanistrum subsp. landra
FD533887       <-- AAGTTT-AAAATATTTGGATGCAGAATAACATTAACACTTTGGCTTCTCT  Raphanus raphanistrum subsp. maritimus
EY898557       <-- AAGTTTTAAAATATTTGGATGCAGAATAACATTAACACTTTGGCTTCTCT  Raphanus raphanistrum subsp. maritimus
EY894256       --> AAGTTTTAAAATATTTGGATGCAGAATAACATTAACACTTTGGCTTCTCT  Raphanus raphanistrum subsp. maritimus
EX766625       --> AAATTTTAAAATATTTGGATGCAGAATAACATTAACACTTTGGCTTCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777388       --> AAATTTTAAAATATTTGGATGCAGAATAACATTAACACTTCGGCTTCTCT  Raphanus raphanistrum subsp. landra
FD547886       --> AAATTTTAAAATATTTGGATGCAGAATAACATTAACACTTTGGCTTCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY918296       --> AAATTTTAAAATATTTGGATGCAAAATAACATTAACACTTCGGCTTCTCT  Raphanus raphanistrum subsp. landra
FD555466       --> AAATTTTAAAATATTTGGATGCAGAATAACATTAACACT-CGGCTTCTCT  Raphanus raphanistrum subsp. landra
EW720039       --> AAGTTTTAAAATATTTGGATGCAGAATAACATTAACACTTTGGCTTCTCT  Raphanus sativus var. oleiformis
FD529946       --> AAGTTTTAAAATATTTGGATGCAGAATAACATTAACACTTTGGCTTCTCT  Raphanus raphanistrum subsp. maritimus
EX750844       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               201    -    251
UN14010        --> CGACCACTCAAGTCTCTTCTTATCATCCCATGGCGTACTTCTGTGTCCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX746442       <-- CGACCACTCAAGTCTCTTCTTATCATCCCATGGCGTACTTCTGTGTCCAG
EX762350       <-- CGACCACTCGAGTCTCTTCTTATCATCCCATGGCGTACTTCTGTGTCCAG
EX773586       <-- CGACCACTCAAGTCTCTTCTTATCATCCCATGGCGTACTTCTGTGTCCAG
EW715438       <-- CGACCACTCAAGTCTCTTCTTATCATCCCATGGCGTACTTCTGTGTCCAG
EY922313       <-- CGACCACTCAAGTCTCTTCTTATCATCCCATGGCGTACTTCTGTGTCCAG
EX769922       <-- CGACCACTCAAGACTCTTCTTATCATCCCATGGCGTACTTCTGTGTCCAG
FD559827       <-- CGACCACTCAAGTCTCTTCTTATCATCCCATGGCGTACTTCTGTGTCCAG
FD533887       <-- CGACCACTCAAGTCTCTTCTTATCATCCCATGGCGTACTTCTGTGTCCAG
EY898557       <-- CGACCACTCAAGTCTCTTCTTATCATCCCATGGCGTACTTCTGTGCCCAG
EY894256       --> CGACCACTCAAGACTCTTCTTATCATCCCATGGCGTACTTCTGTGTCCAG
EX766625       --> CGACCACTCGAGTCTCTTCTTATCATCCCATGGCGTACTTCTGTGTCCAG
EX777388       --> CGACCACTCAAGTCTCTTCTTATCATCCCATGGCGTACTTCTGTGTCCAG
FD547886       --> CGACCACTCAAGTCTCTTCTTATCATCCCATGGCGTACTTCTGTGTCCAG
EY918296       --> CGACCACTCAAGTCTCTTCTTATCATCCCATGGCGTACTTCTGTGTCCAG
FD555466       --> CGACCACTCAAGTCTCTTCTTATCATCCCATGGCGTACTTCTGTGTCCAG
EW720039       --> CGACCACTCAAGTCTCTTCTTATCATCCCATGGCGTACTTCTGTGTCCAG
FD529946       --> CGACCACTCAAGTCTCTTCTTATCATCCCATGGCGTACTTCTGTGTCCAG
EX750844       --> .....................................CTTCTGTGTCCAG

               251    -    301
UN14010        --> CTTCGTGCGGTAGACTCGTACTTGGATTTATCCGTCTTGTACATATGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX746442       <-- CTTCGTGCGGTTGACTCGTACTTGGATTTATCCGTCTTGTACATATGAGC  Raphanus raphanistrum subsp. maritimus
EX762350       <-- CTTCGTGCGGTAGACTCGTACTTGGATTTATCCGTCTTGTACATATGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773586       <-- CTTCGTGCGGTAGACTCGTACTTGGATTTATCCGTCTTGTACATATGAGC  Raphanus raphanistrum subsp. landra
EW715438       <-- CTTCGTGCGGTTGACTCGTACTTGGATTTATCCGTCTTGTACATATGAGC  Raphanus sativus var. oleiformis
EY922313       <-- CTTCGTGC..........................................  Raphanus raphanistrum subsp. landra
EX769922       <-- CTTCGTGCGGTTGACTCGTACTTGGATTTATCCGTCTTGTACATATGAGC  Raphanus raphanistrum subsp. landra
FD559827       <-- CTTCGTGCGGTAGACTCGTACTTGGATTTATCCGTCTTGTACATATGAGC  Raphanus raphanistrum subsp. landra
FD533887       <-- CTTCGTGCGGTTGACTCGTACTTGGATTTATCCGTCCTGTACATATGAGC  Raphanus raphanistrum subsp. maritimus
EY898557       <-- CTTCGTGCGGTTGACTCGTACTTGGATTTATCCGTCTTGTACATATGAGC  Raphanus raphanistrum subsp. maritimus
EY894256       --> CTTCGTGCGGTAGACTCGTACTTGGATTTATCCGTCTTGTACATATGAGC  Raphanus raphanistrum subsp. maritimus
EX766625       --> CTTCGTGCGGTAGACTCGTACTTGGATTTATCCGTCTTGTACATATGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777388       --> CTTCGTGCGGTAGACTCGTACTTGGATTTATCCGTCTTGTACATATGAGC  Raphanus raphanistrum subsp. landra
FD547886       --> CTTCGTGCGGTAGACTCGTACTTGGATTTATCCGTCTTGTACATATGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY918296       --> CTTCGTGCGGTAAACTCGTACTTGGATTTATCCGTCcc............  Raphanus raphanistrum subsp. landra
FD555466       --> CTTCGTGCGGTAGACTCGTACTTGGATTTATCCGTCTTGTACATATGAGC  Raphanus raphanistrum subsp. landra
EW720039       --> CTTCGTGCGGTTGACTCGTACTTGGATTTATCCGTCTTGTACATATGAGC  Raphanus sativus var. oleiformis
FD529946       --> CTTCGTGCGGTTGACTCGTACTTGGATTTATCCGTCCTGTACATATGAGC  Raphanus raphanistrum subsp. maritimus
EX750844       --> CTTCGTGCGGTTGACTCGTACTTGGATTTATCCGTCTTGTACATATGAAC  Raphanus raphanistrum subsp. maritimus

               301    -    351
UN14010        --> AATCTCCGGCACAAGAGGATCGTCAGGGTTAGGGTCAGTCAACAACGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX746442       <-- AATCTCCGGCACAAGAGGATCGTCAGGGTTAGGGTCAGTCAACAACGAGC  Raphanus raphanistrum subsp. maritimus
EX762350       <-- AATCTCCGGCACAAGAGGATCGTCTGGGTTCGGGTCAGTCAACAAGGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773586       <-- AATCTCCGGCACAAGAGGATCGTCAGGGTTAGGGTCAGTCAACAACGAGC  Raphanus raphanistrum subsp. landra
EW715438       <-- AATCTCCGGCACAGGAGGATCGTCTGGGTTCGGGTCAGTCAACAAGGAGC  Raphanus sativus var. oleiformis
EY922313       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX769922       <-- AATCTCCGGCACAAGAGGATCGTCAGGGTTAGGGTCAGTCAACAACGAGC  Raphanus raphanistrum subsp. landra
FD559827       <-- AATCTCCGGCACAAGAGGATCGTCAGGGTTAGGGTCAGTCAACAACGAGC  Raphanus raphanistrum subsp. landra
FD533887       <-- AATCTCCGGCACAAGAGGATCGTCAGGGTTAGGGTCAGTCAACAACGAGC  Raphanus raphanistrum subsp. maritimus
EY898557       <-- AATCTCCGGCACAAGAGGATCGTCAGGGTTAGGGTCAGTCAACAACGAGC  Raphanus raphanistrum subsp. maritimus
EY894256       --> AATCTCCGGCACAAGAGGATCGTCAGGGTTAGGGTCAGTCAACAACGAGC  Raphanus raphanistrum subsp. maritimus
EX766625       --> AATCTCCGGCACAAGAGGATCGTCTGGGTTCGGGTCAGTCAACAAGGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777388       --> AATCTCCGGCACAAGAGGATCGTCAGGGTTAGGGTCAGTCAACAACGAGC  Raphanus raphanistrum subsp. landra
FD547886       --> AATCTCCGGCACAAGAGGATCGTCTGGGTTCGGGTCAGTCAACAAGGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY918296       --> ..................................................  Raphanus raphanistrum subsp. landra
FD555466       --> AATCTCCGGCACAAGAGGATCGTCAGGGTTAGGGTCAGTCAACAACGAGC  Raphanus raphanistrum subsp. landra
EW720039       --> AATCTCCGGCACAGGAGGATCGTCTGGGTTCGGGTCAGTCAACAAGGAGC  Raphanus sativus var. oleiformis
FD529946       --> AATCTCCGGCACAAGAGGATCGTCAGGGTTAGGGTCAGTCAACAACGAGC  Raphanus raphanistrum subsp. maritimus
EX750844       --> AATCTCCGGCACAAAAGGATCGTCAGGGTTAGGGTCAGTCAACAACGAGC  Raphanus raphanistrum subsp. maritimus

               351    -    401
UN14010        --> AAATCGACAACAAAACC-TTGGATATGGTGAGAGCAGGACTCCACTGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX746442       <-- AAATCGACAACAAAACC-TTGGATATGGTGAGAGCAGGACTCCACTGTTC  Raphanus raphanistrum subsp. maritimus
EX762350       <-- AAATCGACAGCAAAACC-TTGGATATGGTAAGAGCAGGACTCCACTGTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773586       <-- AAATCGACAACAAAACC-TTGGATATGGTGAGAGCAGGACTCCACTGTTC  Raphanus raphanistrum subsp. landra
EW715438       <-- AAATCGACAGCAAAACC-TTGGATATGGTAAGAGCAGGACTCCACTGTTC  Raphanus sativus var. oleiformis
EY922313       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX769922       <-- AAATCGACAACAAAACCCTTGGATATGGTGAGAGCAGGACTCCACTGTTC  Raphanus raphanistrum subsp. landra
FD559827       <-- AAATCGACAACAAAACC-TTGGATATGGTGAGAGCAGGACTCCACTGTTC  Raphanus raphanistrum subsp. landra
FD533887       <-- AAATCGACAACAAAACC-TTGGATATGGTGAGAGCAGGACTCCACTGTTC  Raphanus raphanistrum subsp. maritimus
EY898557       <-- AAATCGACAACAAAACC-TTGGATATGGTGAGAGCAGGACTCCACTGTTC  Raphanus raphanistrum subsp. maritimus
EY894256       --> AAATCGACAACAAAACC-TTGGATATGGTGAGAGCAGGACTCCACTGTTA  Raphanus raphanistrum subsp. maritimus
EX766625       --> AAATCGACAGCAAAACC-TTGGATATGGTAAGAGCAGGACTCCACTGTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777388       --> AAATCGACAACAAAACC-TTGGATATGGTGAGAGCAGGACTCCACTGTTC  Raphanus raphanistrum subsp. landra
FD547886       --> AAATCGACAGCAAAACC-TTGGATATGGTAAGAGCAGGACTCCACTGTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY918296       --> ..................................................  Raphanus raphanistrum subsp. landra
FD555466       --> AAATCGACAACAAAACC-TTGGATATGGTGAGAGCAGGACTCCACTGTTC  Raphanus raphanistrum subsp. landra
EW720039       --> AAATCGACAGCAAAACC-TTGGATATGGTAAGAGCAGGACTCCACTGTTC  Raphanus sativus var. oleiformis
FD529946       --> AAATCGACAACAAAACC-TTGGATATGGTGAGAGCAGGACTCCACTGTTC  Raphanus raphanistrum subsp. maritimus
EX750844       --> AAATCGACAACAAAACC-TTGGATATGGTGAGAGCAGGAC..........  Raphanus raphanistrum subsp. maritimus

               401    -    451
UN14010        --> TTTCAGGATATCAAGGCAAATGCTTCCATTGCTGTTGATGTTTGGGTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX746442       <-- TTTCAGGATATCAAGGCAAATGCTTCCATTGCTGTTGATGTTTGGGTGAT
EX762350       <-- TTTCAGGATATCAAGGCAAATGCTTCCATTGCTGTTGATGTTTGGGTGGT
EX773586       <-- TTTCAGGATATCAAGGCAAATGCTTCCATTGCTGTTGATGTTTGGGTGAT
EW715438       <-- TTTCAGGATATCAAGGCAAATGCTTCCATTGCTGTTGATGTTTGGGTGAT
EY922313       <-- ..................................................
EX769922       <-- TTTCAGGATATCAAGGCAAATGCTTCCATTGCTGTTGATGTTTGGGTGAT
FD559827       <-- TTTCAGGATATCAAGGCAAATGCTTCCATTGCTGTTGATGTTTGGGTGAT
FD533887       <-- TTTCAGGATATCAAGGCAAATGCTTCCATTGCTGTTGATGTTTGGGTGAT
EY898557       <-- TTTCAGGATATCAAGGCAAATGCTTCCATTGCTGTTGATGTTTGGGTGAT
EY894256       --> TTTCAGGATATCAAGGCAAATGCTTCCATTGCTGTTGATGTTTGGGTGAT
EX766625       --> TTTCAGGATATCAAGGCAAATGCTTCCATTGCTGTTGATGTTTGGGTGGT
EX777388       --> TTTCAGGATATCAAGGCAAATGCTTCCATTGCTGTTGATGTTTGGGTGAT
FD547886       --> TTTCAGGATATCAAGGCAAATGCTTCCATTGCTGTTGATGTTTGGGTGGT
EY918296       --> ..................................................
FD555466       --> TTTCAGGATATCAAGGCAAATGCTTCCATTGCTGTTGATGTTTGGGTGAT
EW720039       --> TTTCAGGATATCAAGGCAAATGCTTCCATTGCTGTTGATGTTTGGGTGAT
FD529946       --> TTTCAGGATATCAAGGCAAATGCTTCCATTGCTGTTGATGTTTGGGTGAT
EX750844       --> ..................................................

               451    -    501
UN14010        --> AAACCCTTGTCTTAAAAGACACC-TTTGGTGGCTTGAAGGGATAATCAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX746442       <-- AAACCCTTGTCTTAAAAGACACCCTTTGGTGGCTTGAAGGGATAATCAGG
EX762350       <-- AAACCCTTGTCTTAAAAGACACC-TTTGGTGGCTTGAAGGGATAATCGGG
EX773586       <-- AAACCCTTGTCTTAAAAGACACC-TTTGGTGGCTTGAAGGGATAATCAGG
EW715438       <-- AAACCCTTGTCTTAAAAGACACC-TTTGGTGGCTTGAAGGGGTAATCAGG
EY922313       <-- ..................................................
EX769922       <-- AAACCCTTGTCTTAAAAGACACC-TTTGGTGGCTTGAAGGGATAATCAGG
FD559827       <-- AAACCCTTGTCTTAAAAGACACC-TTTGGTGGCTTGAAGGGATAATCAGG
FD533887       <-- AAACCCTTGTCTTAAAAGACACC-TTTGGTGGCTTGAAGGGATAATCAGG
EY898557       <-- AAACCCTTGTCTTAAAAGACACC-TTTGGTGGCTTGAAGGGATAATCAGG
EY894256       --> AAACCCTTGTCTTAAAAGACACC-TTTGGTGGCTTGAAGGGATAATCAGG
EX766625       --> AAACCCTTGTCTTAAAAGACACC-TTTGGTGGCTTGAAGGGATAATCGGG
EX777388       --> AAACCCTTGTCTTAAAAGACACC-TTTGGTGGCTTGAAGGGATAATCAGG
FD547886       --> AAACCCTTGTCTTAAAAGACACC-TTTGGTGGCTTGAAGGGATAATCGGG
EY918296       --> ..................................................
FD555466       --> AAACCCTTGTCTTAAAAGACACC-TTTGGTGGCTTGAAGGGATAATCAGG
EW720039       --> AAACCCTTGTCTTAAAAGACACC-TTTGGTGGCTTGAAGGGGTAATCAGG
FD529946       --> AAACCCTTGTCTTAAAAGACACC-TTTGGTGGCTTGAAGGGATAATCAGG
EX750844       --> ..................................................

               501    -    551
UN14010        --> AGGGAAGTGAATGGAAACCAAAAAGACTCCTCCGGCATAAGGACTGTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX746442       <-- AGGGAAGTGAATGGAAACCAAAAAGACTCCTCCGGCATAAGGACTGTCAG
EX762350       <-- AGGGAAGTGAATGGAAACCAAAAAGACTCCTCCGGCATAAGGACTGTCAG
EX773586       <-- AGGGAAGTGAATGGAAACCAAAAAGACTCCTCCGGCATAAGGACTGTCAG
EW715438       <-- AGGGAAGTGAATGGAAACCAAAAAGACTCCTCCGGCATAAGGACTGTCAG
EY922313       <-- ..................................................
EX769922       <-- AGGGAAGTGAATGGAAACCAAAAAGACTCCTCCGGCATAAGCACTGTCAG
FD559827       <-- AGGGAAGTGAATGGAAACCAAAAAGACTCCTCCGGCATAAGGACTGTCAG
FD533887       <-- AGGGAAGTGAATGGAAACCAAAAAGACTCCTCCGGCATAAGGACTGTCAG
EY898557       <-- AGGGAAGTGAATGGAAACCAAAAAGACTCCTCCGGCATAAGGACTGTCAG
EY894256       --> AGGGAAGTGAATGGAAACCAAAAAGACTCCTCCGGCATAAGGACTGTCAG
EX766625       --> AGGGAAGTGAATGGAAACCAAAAAGACTTCTCCGGCATAAGGACTGTCAG
EX777388       --> AGGGAAGTGAATGGAAACCAAAAAGACTCCTCCGGCATAAGGACTGTCAG
FD547886       --> AGGGAAGTGAATGGAAACCAAAAAGACTCCTCCGGCATAAGGACTGTCAG
EY918296       --> ..................................................
FD555466       --> AGGGAAGTGAATGGAAACCAAAAAGACTCCTCCGGCATAAGGACTGTCAG
EW720039       --> AGGGAAGTGAATGGAAACCAAAAAGACTCCTCCGGCATAAGGACTGTCAG
FD529946       --> AGGGAAGTGAATGGAAACCAAAAAGACTCCTCCGGCATAAGGACTGTCAG
EX750844       --> ..................................................

               551    -    601
UN14010        --> GAGGTCCCATGATAGTTGCTTGCCAATGGAACATGTCCTCAGCCACAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX746442       <-- GAGGCCCCATGATAGTTGCTTGCCAATGGAACATGTCCTCAGCCACAGGT
EX762350       <-- GAGGTCCCATGATAGTTGCTTGCCAATGGAACATGTCCTCAGCCACAGGT
EX773586       <-- GAGGTCCCATGGTAGTTGCTTGCCAATGGAACATGTCCTCAGCCACAGGT
EW715438       <-- GAGGTCCCATGATAGTTGCTTGCCAATGGAACATGTCCTCAGCCACAGGT
EY922313       <-- ..................................................
EX769922       <-- GAGGTCCCATGATAGTTGCTTGCCAATGGAACATGTCCTCAGCCACAGGT
FD559827       <-- GAGGTCCCATGATAGTTGCTTGCCAATGGAACATGTCCTCAGCCACAGGT
FD533887       <-- GAGGTCCCATGATAGTTGCTTGCCAATGGAACATGTCCTCAGCCACAGGT
EY898557       <-- GAGGTCCCATGATAGTTGCTTGCCAATGGAACATGTCCTCAGCCACAGGT
EY894256       --> GAGGTCCCATGATAGTTGCTTGCCAATGGAACATGTCCTCAGCCACAGGT
EX766625       --> GAGGTCCCATGATAGTTGCTTGCCAATGGAACATGTCCTCAGCCACAGGT
EX777388       --> GAGGTCCCATGGTAGTTGCTTGCCAATGGAACATGTCCTCAGCCACAGGT
FD547886       --> GAGGTCCCATGATAGTTGCTTGCCAATGGAACATGTCCTCAGCCACAGGT
EY918296       --> ..................................................
FD555466       --> GAGGTCCCATGATAGTTGCTTGCCAATGGAACATGTCCTCAGCCACAGGT
EW720039       --> GAGGTCCCATGATAGTTGCTTGCCAATGGAACATGTCCTCAGCCACAGGT
FD529946       --> GAGGTCCCATGATAGTTGCTTGCCAATGGAACATGTC.............
EX750844       --> ..................................................

               601    -    651
UN14010        --> CCTGCGCTGCAGTTAGAAGGAGGATCCTTCTGCAAATCCTTGAGCTCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX746442       <-- CCTGCGCTGCAGTTAGAAGGAGGATCCTTCTGCAAATCCTTGAGCTCTTT
EX762350       <-- CCTGCGCTGCAGTTAGAAGGAGGATCCTTCTGCAAATCCTTGAGCTCTTT
EX773586       <-- CCTGCGCTGCAGTTAGAAGGAGGATCCTTCTGCAAATCCTTGAGCTCTTT
EW715438       <-- CCTGCGCTGCAGTTAGAAGGAGGATCCTTCTGCAAATCCTTGAGCTCTTT
EY922313       <-- ..................................................
EX769922       <-- CCTGCGCTGCAGTTAGAAGGAGGATCCTTCTGCAAATCCTTGAGCTCTTT
FD559827       <-- CCTGCGCTGCAGTTAGAAGGAGGATCCTTCTGCAAATCCTTGAGCTCTTT
FD533887       <-- CCTGCGCTGCAGTTAGAAGGAGGATCCTTCTGCAAATCCTTGAGCTCTTT
EY898557       <-- CCTGCGCTGCAGTTAGAAGGAGGATCCTTCTGCAAATCCTTGAGCTCTTT
EY894256       --> CC................................................
EX766625       --> CCTGCGCTGCAGTTAGAAGGAGGATCCTTCTGCAAATCCTTGAGCTCTTT
EX777388       --> CCTGCGCTGCAGTTAGAAGGAGGATCCTTCTGCAAATCCTTGAGCTCTTT
FD547886       --> CCTGCGCTGCAGTTAGAAGGAGGATCCTTCTGCAAATCCTTGAGCTCTTT
EY918296       --> ..................................................
FD555466       --> CCTGCGCTGCAGTTAGAAGGAGGATCCTTCTGCAAATCCTTGAGCTCTTT
EW720039       --> CCTGCGCTGCAGTTAGAAGGAGGATCCTTCTGCAAATCCTTGAGCTCTTT
FD529946       --> ..................................................
EX750844       --> ..................................................

               651    -    701
UN14010        --> CAAAATCCTCTTCGAAGCCATGTGCTCAACCGAGAAAAAAAGAAGCGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX746442       <-- CAAAATCCTCTTCGAAGCCATGTGCTCAACCGAGAAAAAAAGAAGCGATC
EX762350       <-- CAAAATCCTCTTCGAAGCCAT-AGCTGAACCGAGAAAAAA-GAAGCGATC
EX773586       <-- CAAAATCCTCTTCGAAGCCATGTGCTCAACCGAGAAAAAAAGAAGCGATC
EW715438       <-- CAAAATCCTCTTCGAAGCCATGTGCTCAACCGAGAAAAAAAGAAGCGATC
EY922313       <-- ..................................................
EX769922       <-- CAAAATCCTCTTCGAAGCCATGTGCTCAACCGAGAAAAAAAGAAGCGATC
FD559827       <-- CAAAATCCTCTTCGAAGCCATGTGCTCAACCGAGAAAAAAAGAAGCGATC
FD533887       <-- CAAAATCCTCTTCGAAGCCATGTGCTCAACCGAGAAAAAAAGAAGCGATC
EY898557       <-- CAAAATCCTCTTCGAAGCCATGTGCTCAACCGAGAAAAAAAGAAGCGATC
EY894256       --> ..................................................
EX766625       --> CAAAATCCTCTTCGAAGCCAT-AGCTGAACCGAGAAAAAA..........
EX777388       --> CAAAATCCTCTTCGAAGCCATGTGCTCAACCGAGAAAAAAAGAAGCGATC
FD547886       --> CAAAATCCTCTTCGAAGCCAT-AGCTGAACCGAGAAAAAA-GAAGCGATC
EY918296       --> ..................................................
FD555466       --> CAAAATCCTCTTCGAAGCCATGTGCTCAACCGAGAAAAAAA.........
EW720039       --> CAAAATCCTCTTCGAAGCCATGTGCTCAACCGAGAAAAAAAGAAGCGATC
FD529946       --> ..................................................
EX750844       --> ..................................................

               701    -    751
UN14010        --> AGAAAGCGAGAAGACG-ATG---CGGTGCAAAAGAGAGAAAAAACGAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX746442       <-- AGAAAGCGAGAAGACG-ATG---CGGTGCAAAAGAGAGAAAAAA......
EX762350       <-- AGAAAGCGAGAAGACG-ATGATGCGGTGCAAAAGAGAG--AGAACGAATG
EX773586       <-- AGAAAGCGAGAAGACG-ATG---CGGTGCAAAAGAGAGAAAAAA......
EW715438       <-- AGAAAGCGAGAAGACGGATG---CGGTGCAAAAGAGAGGAA--ACGAATG
EY922313       <-- ..................................................
EX769922       <-- AGAAAGCGAGAAGACG-ATG---CGGTGCAAAAGAGAGAAAAAA......
FD559827       <-- AGAAAGCGAGAAGACG-ATG---CGGTGCAAAAGAGAGAAAAAA......
FD533887       <-- AGAAAGCGAGAAGACG-ATG---CGGTGCAAAAGAGAGAAAAAACGAATG
EY898557       <-- AGAAAGCGAGAAGACG-ATG---CGGTGCAAAAGAGAGAAAAAA......
EY894256       --> ..................................................
EX766625       --> ..................................................
EX777388       --> AGAAAGCGAGAAGACG-ATG---CGGTGCAAAAGAGAGAAAAA.......
FD547886       --> AGAAAGCGAGAAGACG-ATGATGCGGTGCAAAAGAGAGA--GAACGAATG
EY918296       --> ..................................................
FD555466       --> ..................................................
EW720039       --> AGAAAGCGAGAAGACGGATG---CGGTGCAAAAGAGAGGAAAcgaatg..
FD529946       --> ..................................................
EX750844       --> ..................................................

               751    -    801
UN14010        --> AGATCCTCGCTCCTCTCCTACTTACCTTTTTCTTTATAGAGTCAGAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX746442       <-- ..................................................
EX762350       <-- AGATCCTCc.........................................
EX773586       <-- ..................................................
EW715438       <-- AGATCCTCGCTCCTCTCCTACTTACCTTTTTCTTTATAGAGTCAGAGAGA
EY922313       <-- ..................................................
EX769922       <-- ..................................................
FD559827       <-- ..................................................
FD533887       <-- AGATCCTCGCTCCTCTCCTACTTACCTTTTTCTTTATAGAGTCAGAGAGA
EY898557       <-- ..................................................
EY894256       --> ..................................................
EX766625       --> ..................................................
EX777388       --> ..................................................
FD547886       --> AGATCCTCGCTCCTCTCCTcc.............................
EY918296       --> ..................................................
FD555466       --> ..................................................
EW720039       --> ..................................................
FD529946       --> ..................................................
EX750844       --> ..................................................

               801    -    851
UN14010        --> ATGTATTCGAGACGGCAAGTCGAAAGCTTCTGATTCATCCAGCGGCTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX746442       <-- ..................................................
EX762350       <-- ..................................................
EX773586       <-- ..................................................
EW715438       <-- ATGTATTCGAGACGGCAAGTCGAAAGCTTCTGATTCcc............
EY922313       <-- ..................................................
EX769922       <-- ..................................................
FD559827       <-- ..................................................
FD533887       <-- ATGTATTCGAGACGGCAAGTCGAAAGCTTCTGATTCATCCAGCGGCTTTC
EY898557       <-- ..................................................
EY894256       --> ..................................................
EX766625       --> ..................................................
EX777388       --> ..................................................
FD547886       --> ..................................................
EY918296       --> ..................................................
FD555466       --> ..................................................
EW720039       --> ..................................................
FD529946       --> ..................................................
EX750844       --> ..................................................

               851    -    901
UN14010        --> CGCCC
                   ~~~~~
EX746442       <-- .....
EX762350       <-- .....
EX773586       <-- .....
EW715438       <-- .....
EY922313       <-- .....
EX769922       <-- .....
FD559827       <-- .....
FD533887       <-- CGCCC
EY898557       <-- .....
EY894256       --> .....
EX766625       --> .....
EX777388       --> .....
FD547886       --> .....
EY918296       --> .....
FD555466       --> .....
EW720039       --> .....
FD529946       --> .....
EX750844       --> .....