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Alignment for radish unigene UN14018

               1      -     51
UN14018        --> GGAAGGGAGGAAAACATAGCAAAACAGCATAAGAGAAACCAAATCAAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544566       <-- ..................................................
EV544102       <-- ..................................................
FD546127       <-- ..................................................
FD539734       <-- ..................................................
EW720913       <-- ..................................................
EV542983       <-- ..................................................
EX900337       <-- ..................................................
FD555020       <-- ..................................................
FD937271       <-- ..................................................
FD573621       <-- ..................................................
FD935285       <-- ..................................................
FD974857       <-- ..................................................
FD973444       --> GGAAGGGAATAAAACATAGCAAAACAGCATAAGAGAAACCAAATCAAAAG
FD544044       --> ........GGAAAACATAGCAAAACAGCATAAGAGAAACCAAATCAAAAG
FD550151       --> ........GGAAAACATAGCAAAACAGCATAAGAGAAACCAAATCAAAAG
EX896402       --> .......ggaAAAACATAGCAAAACAGCATAAGAGAAACCAAATCAAGAG
FD939077       --> ....gggaatAAAACATAGCAAAACAGCATAAGAGAAACCAAATCAAAAG
FD941683       --> .......ggaAAAACATAGCAAAACAGCATAAGAGAAACCAAATCAAAAG
EV539110       --> .............ggATAGCAAAACAGCATAAGAGAAACCAAATCAAAAG
EV548431       --> .............ggATAGCAAAACAGCATAAGAGAAACCAAATCAAAAG
EV548997       --> .............ggATAGCAAAACAGCATAAGAGAAACCAAATCAAAAG
EW733788       --> .............ggATAGCAAAACAGCATAAGAGAAACCAAAT-AAAAG
FD569407       --> .............ggATAGCAAAACAGCATAAGAGAAACCAAATCAAAAG
FD958168       --> ..................aCAAAACAGCATAAGAGAAACCAAATCAAAAG
FY442214       --> ..................................................
FD559289       --> ..................................................

               51     -    101
UN14018        --> AAGAAAAAAAAAGAGTGAAGATGTCTTCAGATCACTCACCTTCTTCATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544566       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544102       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD546127       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539734       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW720913       <-- ..................................................  Raphanus sativus var. oleiformis
EV542983       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900337       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD555020       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD937271       <-- ..................................................  Raphanus sativus var. oleiformis
FD573621       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD935285       <-- ..................................................  Raphanus sativus var. oleiformis
FD974857       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD973444       --> AAGAAAAAAAAAGAGTGAAGATGTCTTCAGATCACTCACCTTCTTCATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544044       --> AAGAAAAAAAAAGAGTGAAGATGTCTTCAGATCACTCACCTTCTTCATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD550151       --> AAGAAAAAAAAAGAGTGAAGATGTCTTCAGATCACTCACCTTCTTCATCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896402       --> AA--AAAAAAAAGAGTAAAGATGTCTTCAGATCACTCACCTTCTTCATCT  Raphanus sativus cv Early Scarlet Globe
FD939077       --> AGAAAAAAAAAAGAGTAAAGATGTCTTCAGATCACTCACCTTCTTCATCT  Raphanus sativus var. oleiformis
FD941683       --> A-GAAAAAAAAAGAGTAAAGATGTCTTCAGATCACTCACCTTCTTCATCT  Raphanus sativus var. oleiformis
EV539110       --> AAGAAAAAAAAAGAGTGAAGATGTCTTCAGATCACTCACCTTCTTCATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548431       --> AAGAAAAAAAAAGAGTGAAGATGTCTTCAGATCACTCACCTTCTTCATCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548997       --> AAGAAAAAAAAAGAGTGAAGATGTCTTCAGATCACTCACCTTCTTCATCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW733788       --> AAGAAAAAAAAAGAGTGAAGATGTCTTCAGATCACTCACCTTCTTCATCT  Raphanus sativus cv Rat-Tail Radish #3870
FD569407       --> AGAAAAAAAAAAGAGTAAAGATGTCTTCAGATCACTCACCTTCTTCATCT  Raphanus sativus cv Early Scarlet Globe
FD958168       --> AGAAAAAAAAAAGAGTAAAGATGTCTTCAGATCACTCACCTTTTTCATCT  Raphanus sativus cv Rat-Tail Radish #3870
FY442214       --> gAGAAAAAAAAAGAGTAAAGATGTCTTCAGATCACTCACCTTCTTCATCT  Raphanus sativus cv GSK3-1
FD559289       --> ..................................................  Raphanus raphanistrum subsp. landra

               101    -    151
UN14018        --> CAAGCCTTCCAAGAACACTCCATCAACAGCTTCCTCTCAAGAAAATTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544566       <-- ........CCAAGAACACTCCATCAACAGCTTCCTCTCAAGAAAATTGCT
EV544102       <-- ..................................................
FD546127       <-- ..................................................
FD539734       <-- ..................................................
EW720913       <-- ..................................................
EV542983       <-- ..................................................
EX900337       <-- ..................................................
FD555020       <-- ..................................................
FD937271       <-- ..................................................
FD573621       <-- ..................................................
FD935285       <-- ..................................................
FD974857       <-- ..................................................
FD973444       --> CAAGCCTTCCAAGAACACTCCATCAACAGCTTCCTCTCAAGAAAATTGCT
FD544044       --> CAAGCCTTCCAAGAACACTCCATCAACAGCCTCCTCTCAAGAAAATTGCT
FD550151       --> CAAGCCTTCCAAGAACACTCCATCAACAGCTTCCTCTCAAGAAAATTGCT
EX896402       --> CAAGCCTTCCAAGAAC-CTCCATCAACAGCTTACTCTCAAGAAAATTGCT
FD939077       --> CAAGCCTTCCAAGAACACTCCATCAACAGCTTCCTCTCAAGAAAATTGCT
FD941683       --> CAAGCCTTCCAAGAACACTCCATCAACAGCTTCCTCTCAAGAAAATTGCT
EV539110       --> CAAGCCTTCCAAGAACACTCCATCAACAGCTTCCTCTCAAGAAAATTGCT
EV548431       --> CAAGCCTTCCAAGAACACTCCATCAACAGCTTCCTCTCAAGAAAATTGCT
EV548997       --> CAAGCCTTCCAAGAACACTCCATCAACAGCTTCCTCTCAAGAAAATTGCT
EW733788       --> CAAGCCTTCCAAGAACACTCCATCAACAGCTTCCTCTCAAGAAAATTGCT
FD569407       --> CAAGCCTTCCAAGAACACTCCATCAACAGCTTCCTCTCAAGAAAATTGCT
FD958168       --> CAAGCCTTCCAAGAACACTCCATCAACAGCTTCCTCTCAAGAAAATTGCT
FY442214       --> CAAGCCTTCCAAGAACACTCCATCAACAGCTTACTCTCAAGAAAATTGCT
FD559289       --> ..................................................

               151    -    201
UN14018        --> TCAGCAGCTTCCTTTTCATCACAACATACAACAGCAACAAGCTCAAGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544566       <-- TCAGCAGCTTCCTTTTCATCACAACATACAACAGCAACAAGCTCAAGTAC
EV544102       <-- ..AGCAGCTTCCTTTTCATCACAACATACAACAGCAACAAGCTCAAGTAC
FD546127       <-- ................CATCACA-CATACA-CAGCA-C-AGCTC-AGTA-
FD539734       <-- ..................................................
EW720913       <-- ..................................................
EV542983       <-- ..................................................
EX900337       <-- ..................................................
FD555020       <-- ..................................................
FD937271       <-- ..................................................
FD573621       <-- ..................................................
FD935285       <-- ..................................................
FD974857       <-- ..................................................
FD973444       --> TCAGCAGCTTCCTTTTCATCACAACATACAACAGCAACAAGCTCAAGTAC
FD544044       --> TCAGCAGCTTCCTTTTCATCACAACATACAACAGCAACAAGCTCAAGTAC
FD550151       --> TCAGCAGCTTCCTTTTCATCACAACATACAACAGCAACAAGCTCAAGTAC
EX896402       --> TCAGCAGCTTCCTTTTCATCACAACATACAACAGCAACAAGCTCAAGTAC
FD939077       --> TCAGCAGCTTCCTTTTCATCACAACATACAACAGCAACAAGCTCAAGTAC
FD941683       --> TCAGCAGCTTCCTTTTCATCACAACATACAACAGCAACAAGCTCAAGTAC
EV539110       --> TCAGCAGCTTCCTTTTCATCACAACATACAACAGCAACAAGCTCAAGTAC
EV548431       --> TCAGCAGCTTCCTTTTCATCACAACATACAACAGCAACAAGCTCAAGTAC
EV548997       --> TCAGCAGCTTCCTTTTCATCACAACATACAACAGCAACAAGCTCAAGTAC
EW733788       --> TCAGCAGCTTCCTTTTCATCACAACATACAACAGCAACAAGCTCAAGTAC
FD569407       --> TCAGCAGCTTCCTTTTCATCACAACATACAACAGCAACAAGCTCAAGTAC
FD958168       --> TCAGCAGCTTCCTTTTCATCACAACATACAACAGCAACAAGCTCAAGTAC
FY442214       --> TCAGCAGCTTCCTTTTCATCACAACATACAACAGCAACAAGCTCAAGTAC
FD559289       --> ..................................................

               201    -    251
UN14018        --> CTGACAAGAACAACTTGAGCGGCAACATTCTCTTGCTTCTCTCTATCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544566       <-- CTGACAAGAACAACTTGAGCGGCAACATTCTCTTGCTTCTCTCTATCCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544102       <-- CTGACAAGAACAACTTGAGCGGCAACATTCTCTTGCTTCTCTCTATCCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD546127       <-- CTGACAAGAACAACTTGAGCGGCA-CA-TCTCTTGCT-CTCTCTATC-TT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539734       <-- ....CAAGAACAACTTGAGCGGCAACATTCTCTTGCTTCTCTCTATCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW720913       <-- ..................................................  Raphanus sativus var. oleiformis
EV542983       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900337       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD555020       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD937271       <-- ..................................................  Raphanus sativus var. oleiformis
FD573621       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD935285       <-- ..................................................  Raphanus sativus var. oleiformis
FD974857       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD973444       --> CTGACAAGAACAACTTGAGCGGCAACATTCTCTTGCTTCTCTCTATCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544044       --> CTGACAAGAACAACTTGAGCGGCAACATTCTCTTGCTTCTCTCTATCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD550151       --> CTGACAAGAACAACTTGAGCGGCAACATTCTCTTGCTTCTCTCTATCCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896402       --> CTGACAAGAACAACTTGAGCGGCAACATTCTCCTGCTTCTCTCTATCCTT  Raphanus sativus cv Early Scarlet Globe
FD939077       --> CTGACAAGAACAACTTGAGCGGCAACATTCTCCTGCTTCTCTCTATCCTT  Raphanus sativus var. oleiformis
FD941683       --> CTGACAAGAACAACTTGAGCGGCAACATTCTCCTGCTTCTCTCTATCCTT  Raphanus sativus var. oleiformis
EV539110       --> CTGACAAGAACAACTTGAGCGGCAACATTCTCTTGCTTCTCTCTATCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548431       --> CTGACAAGAACAACTTGAGCGGCAACATTCTCTTGCTTCTCTCTATCCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548997       --> CTGACAAGAACAACTTGAGCGGCAACATTCTCTTGCTTCTCTCTATCCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW733788       --> CTGACAAGAACAACTTGAGCGGCAACATTCTCTTGCTTCTCTCTATCCTT  Raphanus sativus cv Rat-Tail Radish #3870
FD569407       --> CTGACAAGAACAACTTGAGCGGCAACATTCTCCTGCTTCTCTCTATCCTT  Raphanus sativus cv Early Scarlet Globe
FD958168       --> CTGACAAGAACAACTTGAGCGGCAACATTCTCCTGCTTCTCTCTATCATT  Raphanus sativus cv Rat-Tail Radish #3870
FY442214       --> CTGACAAGAACAACTTGAGCGGCAACATTCTCCTGCTTCTCTCTATCCTT  Raphanus sativus cv GSK3-1
FD559289       --> .....................................gCTCTCAATCCTT  Raphanus raphanistrum subsp. landra

               251    -    301
UN14018        --> GTCTGCGGTATCATCTGCTCACTAGGGTTGCATTACATAATCCGTTGCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544566       <-- GTCTGCGGTATCATCTGCTCACTAGGGTTGCATTACATAATCCGTTGCGC
EV544102       <-- GTCTGCGGTATCATCTGCTCACTAGGGTTGCATTACATAATCCGTTGCGC
FD546127       <-- GTCTGCGGTATCATCTGCTCACTAGGGTTGCATTACATAATCCGTTGCGC
FD539734       <-- GTCTGCGGTATCATCTGCTCACTAGGGTTGCATTACATAATCCGTTGCGC
EW720913       <-- ..CTGCGGTATCATCTGCTCACTAGGGTTGCATTACATAATCCGTTGCGC
EV542983       <-- ...TGCGGTATCATCTGCTCACTAGGGTTGCATTACATAATCCGTTGCGC
EX900337       <-- .....CGGTATCATCTGCTCACTAGGGTTACATTACATAATCCGTTGCGC
FD555020       <-- ..................................................
FD937271       <-- ..................................................
FD573621       <-- ..................................................
FD935285       <-- ..................................................
FD974857       <-- ..................................................
FD973444       --> GTCTGCGGTACCATCTGCTCACTAGGGTTGCATTACATAATCCGTTGCGC
FD544044       --> GTCTGCGGTATCATCTGCTCACTAGGGTTGCATTACATAATCCGTTGCGC
FD550151       --> GTCTGCGGTATCATCTGCTCACTAGGGTTGCATTACATAATCCGTTGCGC
EX896402       --> GTCTGCGGTATCATCTGCTCACTAGGGTTACATTACATAATCCGTTGCGC
FD939077       --> GTCTGCGGTATCATCTGCTCACTAGGGTTGCATTACATAATCCGTTGCGC
FD941683       --> GTCTGCGGTATCATCTGCTCACTAGGGTTGCATTACATAATCCGTTGCGC
EV539110       --> GTCTGCGGTATCATCTGCTCACTAGGGTTGCATTACATAATCCGTTGCGC
EV548431       --> GTCTGCGGTATCATCTGCTCACTAGGGTTGCATTACATAATCCGTTGCGC
EV548997       --> GTCTGCGGTATCATCTGCTCACTAGGGTTGCATTACATAATCCGTTGCGC
EW733788       --> GTCTGCGGTATCATCTGCTCACTAGGGTTGCATTACATAATCCGTTGCGC
FD569407       --> GTCTGCGGTATCATCTGCTCACTAGGGTTGCATTACATAATCCGTTGCGC
FD958168       --> GTCTGCGGTATCATCTGCTCACTAGGGTTGCATTACACAATCCGTTGCGC
FY442214       --> GTCTGCGGTATCATCTGCTCACTAGGGTTGCATTACATAATCCGTTGCGC
FD559289       --> GTCTGCGGTATCATCTGCTCACTAGGGTTGCATTACATAATCCGTTGCGC

               301    -    351
UN14018        --> ATTTAGACGTTCCTCGAGTTTCATGATCTCTGATCCCATCCCAATCCCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544566       <-- ATTTAGACGTTCCTCGAGTTTCATGATCTCTGATCCCATCCCAATCCCGT
EV544102       <-- ATTTAGACGTTCCTCGAGTTTCATGATCTCTGATCCCATCCCAATCCCGT
FD546127       <-- ATT-AGACGTTCCTCGAGTTTCATGATCTCTGATCCCATCCCAATCCCGT
FD539734       <-- ATTTAGACGTTCCTCGAGTTTCATGATCTCTGATCCCATCCCAATCCCGT
EW720913       <-- ATTTAGACGTTCCTCGAGTTTCATGATCTCTGATCCCATCCCAATCCCGT
EV542983       <-- ATTTAGACGTTCCTCGAGTTTCATGATCTCTGATCCCATCCCAATCCCGT
EX900337       <-- ATTTAGACGTTCCTCGAGTTTCATGATCTCTGATCCCATCCCAATCCCGT
FD555020       <-- .................................TCCCATCCCAATCCCGT
FD937271       <-- ..................................................
FD573621       <-- ..................................................
FD935285       <-- ..................................................
FD974857       <-- ..................................................
FD973444       --> ATTTAGACGTTCCTCGAGTTTCATGATCTCTGATCCCATCCCAATCCCGT
FD544044       --> ATTTAGACGTTCCTCGAGTTTCATGATCTCTGATCCCATCCCAATCCCGT
FD550151       --> ATTTAGACGTTCCTCGAGTTTCATGATCTCTGATCCCATCCCAATCCCGT
EX896402       --> ATTTAGACGTTCCTCGAGTTTCATGATCTCTGATCCCATCCCAATCCCGT
FD939077       --> ATTTAGACGTTCCTCGAGTTTCATGATCTCTGATCCCATCCCAATCCCGT
FD941683       --> ATTTAGACGTTCCTCGAGTTTCATGATCTCTGATCCCATCCCAATCCCGT
EV539110       --> ATTTAGACGTTCCTCGAGTTTCATGATCTCTGATCCCATCCCAATCCCGT
EV548431       --> ATTTAGACGTTCCTCGAGTTTCATGATCTCTGATCCCATCCCAATCCCGT
EV548997       --> ATTTAGACGTTCCTCGAGTTTCATGATCTCTGATCCCATCCCAATCCCGT
EW733788       --> ATTTAGACGTTCCTCGAGTTTCATGATCTCTGATCCCATCCCAATCCCGT
FD569407       --> ATTTAGACGTTCCTCGAGTTTCATGATCTCTGATCCCATCCCAATCCCGT
FD958168       --> ATTTAGACGTTCCTCGAGTTTCATGATCTCTGATCCCATCCCAATCCCGT
FY442214       --> ATTTAGACGTTCCTCGAGTTTCATGATCTCTGATCCCATCCCAATCCCGT
FD559289       --> ATTTAGACGTTCCTCGAGTTTCATGATCTCTGATCCCATCCCAATCCCGT

               351    -    401
UN14018        --> CCACACCACGAGGCTCAGCAGCAAACAAAGGCATCAAGAAGAAAGTTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544566       <-- CCACACCACGAGGCTCAGCAGCAAACAAAGGCATCAAGAAGAAAGTTCTC
EV544102       <-- CCACACCACGAGGCTCAGCAGCAAACAAATGCATCAAGAAGAAAGTTCTC
FD546127       <-- CCACACCACGAGGCTCAGCAGCAAACAAAGGCATCAAGAAGAAAGTTCTC
FD539734       <-- CCACACCATGAGGCTCAGCAGCAAACAAAGGCATCAAGAAGAAAGTTCTC
EW720913       <-- CCACACCACGAGGCTCAGCAGCAAACAAAGGCATCAGGAAGAAGGTTCTC
EV542983       <-- CCACACCACGAGGCTCAGCAGCAAACAAAGGCATCAAGAAGAAAGTTCTC
EX900337       <-- CCACACCACGAGGCTCAGCAGCAAACAAAGGCATCAAGATGAAAGTTCTC
FD555020       <-- CCACACCACGAGGCTCAGCAGCTAACAAAGGCATCAAGAAGAAAGTTCTC
FD937271       <-- ..................................................
FD573621       <-- ..................................................
FD935285       <-- ..................................................
FD974857       <-- ..................................................
FD973444       --> CCACACCACGAGGCTCAGCAGCAAACAAAGGCATCAAGAAGAAAGTTCTC
FD544044       --> CCACACCATGAGGCTCAGCAGCAAACAAAGGCATCAAGAAGAAAGTTCTC
FD550151       --> CCACACCACGAGGCTCAGCAGCAAACAAAGGCATCAAGAAGAAAGTTCTC
EX896402       --> CCACACCACGAGGCTCAGCAGCAAACAAAGGCATCAAGATGAAAGTTCTC
FD939077       --> CCACACCACGAGGCTCAGCAGCAAACAAAGGCATCAAGAAGAAAGTTCTC
FD941683       --> CCACACCACGAGGCTCAGCAGCAAACAAAGGCATCAAGAAGAAAGTTCTC
EV539110       --> CCACACCACGAGGCTCAGCAGCAAACAAAGGCATCAAGAAGAAAGTTCTC
EV548431       --> CCACACCACGAGGCTCAGCAGCAAACAAATGCATCAAGAAGAAAGTTCTC
EV548997       --> CCACACCACGAGGCTCAGCAGCAAACAAAGGCATCAAGAAGAAAGTTCTC
EW733788       --> CCACACCACGAGGCTCAGCAGCAAACAAAGGCATCAAGAAGAAAGTTCTC
FD569407       --> CCACACCACGAGGCTCAGCAGCAAACAAAGGCATCAAGAAGAAAGTTCTC
FD958168       --> CCACACCACGAGGCTCAGCAGCAAACAAAGGCATCAAGAAGAAAGTTCTC
FY442214       --> CCACACCACGAGGCTCAGCAGCAAACAAAGGCATCAAGAAGAAAGTTCTC
FD559289       --> CCACACCACGAGGCTCAGCAGCTAACAAAGGCATCAAGAAGAAAGTTCTC

               401    -    451
UN14018        --> AAGATGTTCCCGGTAGTGACTTACTCACCTGAGATGAACTTGTCAGGGG-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544566       <-- AAGATGTTCCCGGTAGTGACTTACTCACCTGAGATGAACTTGTCAGGGG-
EV544102       <-- AAGATGTTCCCGGTAGTGACTTACTCACCTGAGATGAACTTGTCAGGGG-
FD546127       <-- AAGATGTTCCCGGTAGTGACTTACTCACCTGAGATGAACTTGTCAGGGG-
FD539734       <-- AAGATGTTCCCGGTAGTGACTTACTCACCTGAGATGAACTTGTCAGGGG-
EW720913       <-- AAGATGTTCCCGGTAGTGACTTACTCACCTGAGATGAACTTGTCAGGGG-
EV542983       <-- AAGATGTTCCCGGTAGTGACTTACTCACCTGAGATGAACTTGTCAGGGG-
EX900337       <-- AAGATGTTCCCGGTAGTGACTTACTCACCTGAGATGAACTTGTCAGGGG-
FD555020       <-- AAGATGTTCCCGGTAGTGACTTACTCACCTGAGATGAACTTGTCAGGGG-
FD937271       <-- ..................................................
FD573621       <-- ..................................................
FD935285       <-- ..................................................
FD974857       <-- ..................................................
FD973444       --> AAGATGTTCCCGGTAGTGACTTACTCACCTGAGATGAACTTGTCAGGGG-
FD544044       --> AAGATGTTCCCGGTAGTGACTTACTCACCTGAGATGAACTTGTCAGGGG-
FD550151       --> AAGATGTTCCCGGTAGTGACTTACTCACCTGAGATGAACTTGTCAGGGG-
EX896402       --> AAGATGTTCCCGGTAGTGACTTACTCACCTGAGATGAACTTGTCAGGGG-
FD939077       --> AAGATGTTCCCGGTAGTGACTTACTCACCTGAGATGAACTTGTCAGGGGG
FD941683       --> AAGATGTTCCCGGTAGTGACTTACTCACCTGAGATGAACTTGTCAGGGG-
EV539110       --> AAGATGTTCCCGGTAGTGACTTACTCACCTGAGATGAACTTGTCAGGGG-
EV548431       --> AAGATGTTCCCGGTAGTGACTTACTCACCTGAGATGAACTTGTCAGGGG-
EV548997       --> AAGATGTTCCCGGTAGTGACTTACTCACCTGAGATGAACTTGTCAGGGG-
EW733788       --> AAGATGTTCCCGGTAGTGACTTACTCACCTGAGATGAACTTGTCAGGGG-
FD569407       --> AAGATGTTCCCGGTAGTGACTTACTCACCTGAGGTGAACTTGTCAGGGG-
FD958168       --> AAGATGTTCCCGGTAGTGACTTACTCACCTGAGATGAACTTGTCAGGGG-
FY442214       --> AAGATGTTCCCGGTAGTGACTTACTCACCTGAGATGAACTTGTCAGGGG-
FD559289       --> AAGATGTTCCCGGTAGTGACTTACTCACCTGAGATGAACTTGTCAGGGG-

               451    -    501
UN14018        --> TTGGCGAAGAGTGTGTCATTTGCTTGTCTGATTTCGTAGCTGGAGAACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544566       <-- TTGGCGAAGAGTGTGTCATTTGCTTGTCTGATTTCGTAGCTGGAGAACAG
EV544102       <-- TTGGCGAAGAGTGTGTCATTTGCTTGTCTGATTTCGTAGCTGGAGAACAG
FD546127       <-- TTGGCGAAGAGTGTGTCATTTGCTTGTCTGATTTCGTAGCTGGAGAACAG
FD539734       <-- TTGGCGAAGAGTGTGTCATTTGCTTGTCTGATTTCGTAGCTGGAGAACAG
EW720913       <-- TTGGCGAAGGGTGTGTCATTTGCTTGTCTGATTTCGTAGCTGGAGAACAG
EV542983       <-- TTGGCGAAGAGTGTGTCATTTGCTTGTCTGATTTCGTAGCTGGAGAACAG
EX900337       <-- TTGGCGAAGAGTGTGTCATTTGCTTGTCTGATTTCGTAGCTGGAGAACAG
FD555020       <-- TTGGCGAAGAGTGTGTCATTTGCTTGTCTGATTTCGTAGCTGGAGAACAG
FD937271       <-- ........................TGTCTGATTTCGTAGCTGGAGAACAG
FD573621       <-- ....................................TAGCTGGAGAACAG
FD935285       <-- ..................................................
FD974857       <-- ..................................................
FD973444       --> TTGGCGAAGAGTGTGTCATTTGCTTGTCTGATTTCGTAGCTGGAGAACAG
FD544044       --> TTGGCGAAGAGTGTGTCATTTGCTTGTCTGATTTCGTAGCTGGAGAACAG
FD550151       --> TTGGCGAAGAGTGTGTCATTTGCTTGTCTGATTTCGTAGCTGGAGAACAG
EX896402       --> TTGGCGAAGAGTGTGTCATTTGCTTGTCTGATTTCGTAGCTGGAGAACAG
FD939077       --> TTGGCGAAGAGTGTGTCATTTGCTTGTCTGATTTCGTAGCTGGAGAACAG
FD941683       --> TTGGCGAAGAGTGTGTCATTTGCTTGTCTGATTTCGTAGCTGGAGAACAG
EV539110       --> TTGGCGAAGAGTGTGTCATTTGCTTGTCTGATTTCGTAGCTGGAGAACAG
EV548431       --> TTGGCGAAGAGTGTGTCATTTGCTTGTCTGATTTCGTAGCTGGAGAACAG
EV548997       --> TTGGCGAAGAGTGTGTCATTTGCTTGTCTGATTTCGTAGCTGGAGAACAG
EW733788       --> TTGGCGAAGAGTGTGTCATTTGCTTGTCTGATTTCGTAGCTGGAGAACAG
FD569407       --> TTGGCGAAGAGTGTGTCATTTGCTTGTCTGATTTCGTAGCTGGAGAACAG
FD958168       --> TTGGCGAAGAGTGTGTCATTTGCTTGTCTGATTTCGTAGCTGGAGAACAG
FY442214       --> TTGGCGAAGAGTGTGTCATTTGCTTGTCTGATTTCGTAGCTGGAGAACAG
FD559289       --> TTGGCGAAGAGTGTGTCATTTGCTTGTCTGATTTCGTAGCTGGAGAACAG

               501    -    551
UN14018        --> ATACGGCTGCTTCCAAAGTGTAACCATGGGTTCCACGTTCGTTGTATCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544566       <-- ATACGGCTGCTTCCAAAGTGTAACCATGGGTTCCACGTTCGTTGTATCGA
EV544102       <-- ATACGGCTGCTTCCAAAGTGTAACCATGGGTTCCACGTTCGTTGTATCGA
FD546127       <-- ATACGGCTGCTTCCAAAGTGTAACCATGGGTTCCACGTTCGTTGTATCGA
FD539734       <-- ATACGGCTGCTTCCAAAGTGTAACCATGGGTTCCACGTTCGTTGTATCGA
EW720913       <-- ATACGGCTGCTTCCAAAGTGTAACCATGGGTTCCACGTTCGTTGTATCGA
EV542983       <-- ATACGGCTGCTTCCAAAGTGTAACCATGGGTTCCACGTTCGTTGTATCGA
EX900337       <-- ATACGGCTGCTTCCAAAGTGTAACCATGGGTTCCACGTTCGTTGTATCGA
FD555020       <-- ATACGGCTGCTTCCAAAGTGTAACCATGGGTTCCACGTTCGTTGTATCGA
FD937271       <-- ATACGGGTGCTTCCAAAGTGTAACCATGGGTTCCACGTTCGTTGTATCGA
FD573621       <-- ATACGGCTGCTTCCAAAGTGTAACCATGGGTTCCACGTTCGTTGTATCGA
FD935285       <-- ..................................................
FD974857       <-- ..................................................
FD973444       --> ATACGGCTGCTTCCAAAGTGTAACCATGGGTTCCACGTTCGTTGTATCGA
FD544044       --> ATACGGCTGCTTCCAAAGTGTAACCATGGGTTCCACGTTCGTTGTATCGA
FD550151       --> ATACGGCTGCTTCCAAAGTGTAACCATGGGTTCCACGTTCGTTGTATCGA
EX896402       --> ATACGGCTGCTTCCAAAGTGTAACCATGGGTTCCACGTTCGTTGTATCGA
FD939077       --> ATACGGCTGCTTCCAAAGTGTAACCATGGGTTCCACGTTCGTTGTATCGA
FD941683       --> ATACGGCTGCTTCCAAAGTGTAACCATGGGTTCCACGTTCGTTGTATCGA
EV539110       --> ATACGGCTGCTTCCAAAGTGTAACCATGGGTTCCACGTTCGTTGTATCGA
EV548431       --> ATACGGCTGCTTCCAAAGTGTAACCATGGGTTCCACGTTCGTTGTATCGA
EV548997       --> ATACGGCTGCTTCCAAAGTGTAACCATGGGTTCCACGTTCGTTGTATCGA
EW733788       --> ATACGGCTGCTTCCAAAGTGTAACCATGGGTTCCACGTTCGTTGTATCGA
FD569407       --> ATACGGCTGCTTCCAAAGTGTAACCATGGGTTCCACGTTCGTTGTATCGA
FD958168       --> ATACGGCTGCTTCCAAAGTGTAACCATGGGTTCCACGTTCGTTGTATCGA
FY442214       --> ATACGGCTGCTTCCAAAGTGTAACCATGGGTTCCACGTTCGTTGTATCGA
FD559289       --> ATACGGCTGCTTCCAAAGTGTAACCATGGGTTCCACGTTCGTTGTATCGA

               551    -    601
UN14018        --> CAAGTGGCTTACACAACATATGACTTGTCCTAAATGTAGACACTGTCTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544566       <-- CAAGTGGCTTACACAACATATGACTTGTCCTAAATGTAGACACTGTCTGG
EV544102       <-- CAAGTGGCTTACACAACATATGACTTGTCCTAAATGTAGACACTGTCTGG
FD546127       <-- CAAGTGGCTTACACAACATATGACTTGTCCTAAATGTAGACACTGTCTGG
FD539734       <-- CAAGTGGCTTACACAACATATGACTTGTCCTAAATGTAGACACTGTCTGG
EW720913       <-- CAAGTGGCTTACACAACATATGACTTGTCCTAAATGTAGACACTGTCTGG
EV542983       <-- CAAGTGGCTTACACAACATATGACTTGTCCTAAATGTAGACACTGTCTGG
EX900337       <-- CAAGTGGCTTACACAACATATGACTTGTCCTAAATGTAGACACTGTCTGG
FD555020       <-- CAAGTGGCTTACACAACATATGACTTGTCCTAAATGTAGACACTGTCTGG
FD937271       <-- CAAGTGGCTTACACAACATATGACTTGTCCTAAATGTAGACACTGTTTGG
FD573621       <-- CAAGTGGCTTACACAACATATGACTTGTCCTAAATGTAGACACTGTTTGG
FD935285       <-- ..................................................
FD974857       <-- ..................................................
FD973444       --> CAAGTGGCTTACACAACATATGACTTGTCCTAAATGTAGACACTGTCTGG
FD544044       --> CAAGTGGCTTACACAACATATGACTTGTCCTAAATGTAGACACTGTCTGG
FD550151       --> CAAGTGGCTTACACAACATATGACTTGTCCTAAATGTAGACACTGTCTGG
EX896402       --> CAAGTGGCTTACACAACATATGACTTGTCCTAAATGTAGACACTGTCTGG
FD939077       --> CAAGTGGCTTACACAACATATGACTTGTCCTAAATGTAGACACTGTCTGG
FD941683       --> CAAGTGGCTTACACAACATATGACTTGTCCTAAATGTAGACACTGTCTGG
EV539110       --> CAAGTGGCTTACACAACATATGACTTGTCCTAAATGTAGACACTGTCTGG
EV548431       --> CAAGTGGCTTACACAACATATGACTTGTCCTAAATGTAGACACTGTCTGG
EV548997       --> CAAGTGGCTTACACAACATATGACTTGTCCTAAATGTAGACACTGTCTGG
EW733788       --> CAAGTGGCTTACACAACATATGACTTGTCCTAAATGTAGACACTGTCTGG
FD569407       --> CAAGTGGCTTACACAACATATGACTTGTCCTAAATGTAGACACTGTCTGG
FD958168       --> CAAGTGGCTTACACAACATATGACTTGTCCTAAATGTAGACACTGTCTGG
FY442214       --> CAAGTGGCTTACACAACATATGACTTGTCCTAAATGTAGACACTGTCTGG
FD559289       --> CAAGTGGCTTACACAACATATGACTTGTCCTAAATGTAGACACTGTCTGG

               601    -    651
UN14018        --> TTGAGACATGTCAAAAGATATTAGGAGATTGCGATGAAGCTGATGAGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544566       <-- TTGAGACATGTCAAAAGATATTAGGAGATTGCGATGAAGCTGATGAGGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544102       <-- TTGAGACATGTCAAAAGATATTAGGAGATTGCGATGAAGCTGATGAGGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD546127       <-- TTGAGACATGTCAAAAGATATTAGGAGATTGCGATGAAGCTGATGAGGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD539734       <-- TTGAGACATGTCAAAAGATCTTAGGAGATTGCGATGAAGCTGATGAGGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW720913       <-- TTGAGACATGTCAAAAGATATTAGGAGATTGCGATGAAGCTGATGAGGTT  Raphanus sativus var. oleiformis
EV542983       <-- TTGAGACATGTCAAAAGATCTTAGGAGATTGCGATGAAGCTGATGAGGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX900337       <-- TTGAGACATGTCAAAAGATATTAGGAGATTGCGATGAAGCTGATGAGGTT  Raphanus sativus cv Early Scarlet Globe
FD555020       <-- TTGAGACATGTCAAAAGATATTAGGAGATTGCGATGAAGCTGATGAGGTT  Raphanus raphanistrum subsp. landra
FD937271       <-- TTGAGACATGTCAAAAGATATTAGGAGATTGCGATGAAGCTGATGAGGTT  Raphanus sativus var. oleiformis
FD573621       <-- TTGAGACATGTCAAAAGATATTAGGAGATTGCGATGAAGCTGATGAGGTT  Raphanus sativus cv Early Scarlet Globe
FD935285       <-- .TGAGACATGTCAAAAGATATTAGGAGATTGCGATGAAGCTGATGAGGTT  Raphanus sativus var. oleiformis
FD974857       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD973444       --> TTGAGACATGTCAAAAGATCTTAGGAGATTGCGATGAAGCTGATGAG-TT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544044       --> TTGAGACATGTCAAAAGATCTTAGGAGATTGCGATGAAGCTGATGAGGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD550151       --> TTGAGACATGTCAAAAGATATTAG-AGATTGCGATGAAGCTGATGAGttg  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896402       --> TTGAGACATGTCAAAAGATATTAGGAGATTGCGATGAAGCTGATGAGGTT  Raphanus sativus cv Early Scarlet Globe
FD939077       --> TTGAGACATG........................................  Raphanus sativus var. oleiformis
FD941683       --> TTGAGACATGTCAAAAGATATTAGGAGATTGCGATGAAGCTGATGAGGTT  Raphanus sativus var. oleiformis
EV539110       --> TTGAGACATGTCAAAAGATCTTAGGAGATTGCGATGAAGCTGATGAGGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV548431       --> TTGAGACATGTCAAAAGATATTAGGAGATTGCGATGAAGCTGATGAGGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548997       --> TTGAGACATGTCAAAAGATATTAGGAGATTGCGATGAAGCTGATGAGGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW733788       --> TTGAGACATGTCAAAAGATATTAGGAGATTGCGATGAAGCTGATGAGGTT  Raphanus sativus cv Rat-Tail Radish #3870
FD569407       --> TTGAGACATGTCAAAAGATATTAGGAGATTGCGATGAAGCTGATGAGGTT  Raphanus sativus cv Early Scarlet Globe
FD958168       --> TTGAGACATGTCAAAAGATATTAG-AGATTGCGATGAAGCTGA.......  Raphanus sativus cv Rat-Tail Radish #3870
FY442214       --> TTGAGACATGTCAAAAGATATTAGGAGATTGCGATGAAGCTGATGAGGTT  Raphanus sativus cv GSK3-1
FD559289       --> TTGAGACATGTCAAAAGATATTAGGAGATTGCGATGAAGCTGATGAGGTT  Raphanus raphanistrum subsp. landra

               651    -    701
UN14018        --> GAAGCAACACCAA-GGGAGAGCATAGAGGTGAGAATTGATCCTGTAGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544566       <-- GAAGCAACACCAA-GGGAGAGCATAGAGGTGAGAATTGATCCTGTAGAAC
EV544102       <-- GAAGCAACACCAA-GGGAGAGCATAGAGGTGAGAATTGATCCTGTAGAAC
FD546127       <-- GAAGCAACACCAA-GGGAGAGCATAGAGGTGAGAATTGATCCTGTAGAAC
FD539734       <-- GAAGCAACACCAA-GGGAGAGCATAGAGGTGAGAATTGCTCCTGTAGAAC
EW720913       <-- GAATCAACACCGA-GGGAGAGCATAGAGGTGAGAATTGATCCTGTAGAAC
EV542983       <-- GAAGCAACACCAA-GGGAGAGCATAGAGGTGAGAATTGCTCCTGTAGAAC
EX900337       <-- GAAGCAACACCAA-GGGAGAGCATAGAGGTGAGAATTGATCCTGTAGAAC
FD555020       <-- GAAGCAACACCAA-GGGAGAGCATAGAGGTGAGAATTGATCCTGTAGAAC
FD937271       <-- GAAGCAACACCAA-GAGAGAGCATAGAGGTGAGAATTGATCCTGTAGAAC
FD573621       <-- GAAGCAACACCAA-GGGAGAGCATAGAGGTGAGAATTGATCCTGTAGAAC
FD935285       <-- GAAGCAACACCAA-GGGAGAGCATAGAGGTGAGAATTGATCCTGTAGAAC
FD974857       <-- ..................................................
FD973444       --> GAAGCAACACCAA-GGGAGAGCATAGAGGTGAGAttgctctgt.......
FD544044       --> GAAGCAACACCAA-GGGAGAGCATAGAGGTGAGAATTGCTCCTGTAGAAC
FD550151       --> a.................................................
EX896402       --> GAAGCAACACCAAAGGGAGAGCATAGAGGTGAGAATTGATCCTGTAGAAC
FD939077       --> ..................................................
FD941683       --> GAAGCAACACCAA-GAGAGAGCATAGAGGTGAGAATTGATCCTGT.....
EV539110       --> GAAGCAACACCAA-GGGAGAGCATAGAGGTGAGAATTGCTCCTGTAGAAC
EV548431       --> GAAGCAACACCAAAGGGAGAGCATAGAGGTGAGAATTGATCCTGTAGAAC
EV548997       --> GAAGCAACACCAA-GGGAGAGCATAGAGGTGAGAATTGATCCTGTAGAAC
EW733788       --> GAAGCAACACCAA-GGGAGAGCATAGAGGTGAGAATTGATCCTGTAGA-C
FD569407       --> GAAGCAACACCAA-GGGAGAGCA...........................
FD958168       --> ..................................................
FY442214       --> GAAGCAACACCAA-GGGAGAGCATAGAGGTGAGAATTGATCCTGTAGAAC
FD559289       --> GAAGCAACACCAA-GGGAGAGCATAGAGGTGAGAATTGATCCTGTAGAAC

               701    -    751
UN14018        --> CTGAAGCAAGAGTCAGCACTTTTAGAGAAAGCAGCTAGAGAGTATGTGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544566       <-- CTGAAGCAAGAGTCAGCACTTTTAGAGAAAGCAGCTAGAGAGTATGTGCG
EV544102       <-- CTGAAGCAAGAGTCAGCACTTTTAGAGAAAGCAGCTAGAGAGTATGTGCG
FD546127       <-- CTGAAGCAAGAGTCAGCACTTTTAGAGAAAGCAGCTCGAGAGTATGTGCG
FD539734       <-- CTGAAGCAAGAGTCAGCACTTTTAGAGAAAGCAGCTAGAGAGTATGTGCC
EW720913       <-- CTGAAGCAAGAGTCAGCACTTTTAGAGAAAGCAGCTAGAGAGTATGTGCG
EV542983       <-- CTGAAGCAAGAGTCAACACTTTTAGAGAAAGCAGCTAGAGAGTATGTGCC
EX900337       <-- CTGAAGCAAGAGTCAGCACTTTTAGAGAAAGCAGCTAGAGAGTATGTGCG
FD555020       <-- CTGAAGCAAGAGTCAGCACTTTTAGAGAAAGCAGCTAGAGAGTATGTGCG
FD937271       <-- CTGAAGCAAGAGTCAGCACTTTTAGAGAAAGCAGCTAGAGAGTATGTGCG
FD573621       <-- CTGAAGCAAGAGTCAGCACTTTTAGAGAAAGCAGCTAGAGAGTATGTGGG
FD935285       <-- CTGAAGCAAGAGTCAGCACTTTTAGAGAAAGCAGCTAGAGAGTATGTGGG
FD974857       <-- ..................................................
FD973444       --> ..................................................
FD544044       --> CTGAAGCAAGAGTCAGCACTTTTAGAGAAAGCAGCTAGAGAGTATGTGCC
FD550151       --> ..................................................
EX896402       --> CTGAAGCAAGAGTCAGCACTTTTAGAGAAAGCAGCTAGAGAGTATGTGCG
FD939077       --> ..................................................
FD941683       --> ..................................................
EV539110       --> CTGAAGCAAGAGTCAACACTTTTAGAGAAAGCAGCTAGAGAGTATGTGCC
EV548431       --> CTGAAGCAAGAGTCAGCACTTTTAGAGAAAGCAGCTAGAGAGTATGTGCG
EV548997       --> CTGAAGCAAGAGTCAGCACTTTTAGAGAAAGCAGCTAGAGAGTATGTGCG
EW733788       --> CTGAAGCAAGAGTCAGCACTTTTAGAGA-CGCAGCTAGAGAGTATGTGCG
FD569407       --> ..................................................
FD958168       --> ..................................................
FY442214       --> CTGAAGCAAGAGTCAGCACTTTTAGAGAAAGCAGCTAGAGAGTATGTGCG
FD559289       --> CTGAAGCAAGAGTCAGCACTTTTAGAGAAAGCAGCTAGAGAGTATGTGCG

               751    -    801
UN14018        --> AATAAACAACTAGATTTCAAGATTTTAGTTCGTCAACAACATTGGAACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544566       <-- AATAAACAACTAGATTTCAAGATTTTAGTTCGTCAACAACATTGGAACAG
EV544102       <-- AATAAACAACTAGATTTCAAGATTTTAGTTCGTCAACAACATTGGAACAG
FD546127       <-- AATAAACAACTAGATTTCAAGATTTTAGTTCGTCAACAACATTGGAACAG
FD539734       <-- AATAAACAACTAGATTTCAAGATTTTAGTTCTTCAACAAGATTGGAATAC
EW720913       <-- AATAAACAACTAGATTTCAAGATTTTAGTTCGTCAACAACATTGGAACAG
EV542983       <-- AATAAACAACTAGATTTCAAGATTTTAGTTTTTCAACAAGATTGGAATAC
EX900337       <-- AATAAACAACTAGATTTCAAGATTTCAGTTCGTCAACAACATTGGAACAG
FD555020       <-- AATAAACAACTAGATTTCAAGATTTTAGTTCGTCAACAACATTGGAACAG
FD937271       <-- AATAAACAACTAGATTTCAAGATTTTAGTTCGTCAACAACATTGGAACAG
FD573621       <-- AATAAAC...........................................
FD935285       <-- AATAAACAACTAGATTTCAAGATTTTAGTTCGTCAACAACATTGGAACAG
FD974857       <-- ............GATTTCAAGATTTTAGTTCGTCAACAACATTGGAACAG
FD973444       --> ..................................................
FD544044       --> AATAAACAACTAGATTTCAAGATTTTAG......................
FD550151       --> ..................................................
EX896402       --> AATAAACA-CTAGATTTCA-GATTTCAGTTCGTCA-C-ACATTGGAACAG
FD939077       --> ..................................................
FD941683       --> ..................................................
EV539110       --> AATAAACAACTAGATTTCAAGATTTTAGTTCTTCAACA-GATTGGAATAC
EV548431       --> AATAAACAACTAGATTTCAAGA............................
EV548997       --> AATAAACAACTAGATTTCAAGATTTTAGTTCGTCAACAACATTGGAACAG
EW733788       --> A.................................................
FD569407       --> ..................................................
FD958168       --> ..................................................
FY442214       --> AATAAACAACTAGATTTCAAGATTTTAGTTCGTCAACAACATTGGAACAG
FD559289       --> AATAAACAACTAGATTTCAAGATTTTAGTTCGTCAACAACATTGGAACAG

               801    -    851
UN14018        --> AGTTT-ATGTCTCTAGCCAGTAGGATTCCAAAATCAAACACAATGGAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544566       <-- AGTTT-ATGTCTCTAGCCAGTAGGATTCCAAAATCAAACACAATGGAGCC
EV544102       <-- AGTTT-ATGTCTCTAGCCAGTAGGATTCCAAAATCAAACACA-TGGAGCC
FD546127       <-- AGTTT-ATGTCTCTAGCCAGTAGGATTCCAAAATCAAACACAATGGAGCC
FD539734       <-- AGTTTTATGTCCCTAGACAGTAGGATTCAAAAATCAAACACAATGGAGCT
EW720913       <-- AGTTT-ATGTCTCTAGCCAGTAGGATTCCAAAATCAAACACAATGGAGCC
EV542983       <-- AGTTTTATGTCCCTAGACAGTAGGATTCAAAAATCAAACACAATGGAGCT
EX900337       <-- AGTTT-ATGTCTCTAGCCAGTAGGATTCCAAAATCAAACACAATGGAGCC
FD555020       <-- AGTTT-ATGTCTCTAGCCAGTAGGATTCCAAAATCAAACACAATGGAGCC
FD937271       <-- AGTTT-ATGTCTCTAGCCAGTAGGATTCCAAAATCAAACACAATGGAGCC
FD573621       <-- ..................................................
FD935285       <-- AGTTT-ATGTCTCTAGCCAGTAGGATTCCAAAATCAAACACAATGGAGCC
FD974857       <-- AGTTT-ATGTCTCTAGCCAGTAGGATTCCAAAATCAAACACAATGGAGCC
FD973444       --> ..................................................
FD544044       --> ..................................................
FD550151       --> ..................................................
EX896402       --> AGTT--ATGTCTCTAGCCAGT.............................
FD939077       --> ..................................................
FD941683       --> ..................................................
EV539110       --> AGTTTTATGTCCCTAGACAGTAG-ATT-CAAAATCAAACACA-T-GAG-C
EV548431       --> ..................................................
EV548997       --> AGTTT-ATGTCTC.....................................
EW733788       --> ..................................................
FD569407       --> ..................................................
FD958168       --> ..................................................
FY442214       --> AGTTT-ATGTCTCTAGCCAGTAGGATTCCAAAATCAAACACAATGGAGC.
FD559289       --> AGTTT-ATGTCTCTAGCCAGTAGGATTCCAAAATCAAACACAATGGAGCC

               851    -    901
UN14018        --> TTTTTGTTTATTTTT-ATTTTGCCCTGAAGCTCAAAATGTAAAGAGAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544566       <-- TTTTTGTTTATTTTT-ATTTTGCCCTGAAGCTCAAAATGTAAAGAGAATA
EV544102       <-- TTTTTGTTTATTTTT-ATTTTGCCCTGAAGCTCAAAATGTAAAGAGAATA
FD546127       <-- TTTTTGTTTATTTTT-ATTTTGCCCTGAAGCTCAAAATGTAAAGAGAATA
FD539734       <-- TTTTTGTTTGTTTTT-CTTTTGCCCTGAAGCTCAAAATGTAAAGAGAATT
EW720913       <-- TTTTTGTTTATTTTT-ATTTTGCCCTGAAGCTCAAAATGTAAAGAGAATA
EV542983       <-- TTTTTGTTTGTTTTT-CTTTTGCCCTtttatcat................
EX900337       <-- TTTTTGTTTATTTTT-ATTTTGCCCTGAAGCTCAAAATGTAAAGAGAATA
FD555020       <-- TTTTTGTTTATTTTTTATTTTGCCCTGAAGCTCAAAATGTAAAGAGAATA
FD937271       <-- TTTTTGTTTATTTTT-ATTTTGCCCTGAAGCTCAAAATGTAAAGAGAATA
FD573621       <-- ..................................................
FD935285       <-- TTTTTGTTTATTTTT-ATTTTGCCCTGAAGCTCAAAATGTAAAGAGAATA
FD974857       <-- TTTTTGTTTATTTTT-ATTTTGCCCTGAAGCTCAAAATGTAAAGAGAATA
FD973444       --> ..................................................
FD544044       --> ..................................................
FD550151       --> ..................................................
EX896402       --> ..................................................
FD939077       --> ..................................................
FD941683       --> ..................................................
EV539110       --> TTTTTGTTTGTTTTT-CTTT-GCCCTtttatca.................
EV548431       --> ..................................................
EV548997       --> ..................................................
EW733788       --> ..................................................
FD569407       --> ..................................................
FD958168       --> ..................................................
FY442214       --> ..................................................
FD559289       --> TTTTTGTTTATTTTTTATTTTGCCCTGAAGCTCAAAATGTAAAGAGAATA

               901    -    951
UN14018        --> TATCTTAAGCTTTTCATGGCATCATAAGTTCATCAGATTTTTCTGTGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544566       <-- TATCTTAAGCTTTTCATGGCATCAT.........................
EV544102       <-- TATCTTAAGCTTTTCATGGCATCATAAGTTCATCgg..............
FD546127       <-- TATCTTAAGCTTTTCATGGCATCATAAGTTCATCAGATTTTTCTGTGTTA
FD539734       <-- TATCTTAAGCTTTTCATGGCATCATAACTTCATCAt..............
EW720913       <-- TATCTTAAGCTTTTCATGGCATCATAAGTTCATCAGATTTTTCTGTGTTA
EV542983       <-- ..................................................
EX900337       <-- TATCTTAAGCTTTTCATGGCATCATAgg......................
FD555020       <-- TATCTTAAGCTTTTCATGGCATCATAAGTTCATC................
FD937271       <-- TATCTTAAGCTTTTCATGGCATCATAAGTTCATCAG..............
FD573621       <-- ..................................................
FD935285       <-- TATCTTAAGCTTTTCATGGCATCATAAGTTCATCAGATTTTTCTGTGTTA
FD974857       <-- TATCTTAAGCTTTTCATGGCATCATAAGTTCATC................
FD973444       --> ..................................................
FD544044       --> ..................................................
FD550151       --> ..................................................
EX896402       --> ..................................................
FD939077       --> ..................................................
FD941683       --> ..................................................
EV539110       --> ..................................................
EV548431       --> ..................................................
EV548997       --> ..................................................
EW733788       --> ..................................................
FD569407       --> ..................................................
FD958168       --> ..................................................
FY442214       --> ..................................................
FD559289       --> TATCTTAAGCTTTTCATGGCATCATAAGTTCATC................

               951    -   1001
UN14018        --> TGGAGGTGGTATATGAGCTATTTACAAATAGAAATACATGTACTCATATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544566       <-- ..................................................
EV544102       <-- ..................................................
FD546127       <-- TGGAGGTGGTATATGAGCTATTTACAAATAGAAATACATGTACTCATATC
FD539734       <-- ..................................................
EW720913       <-- TGGAGGTGGTATATGAGCTATTTACAAATAGAAATACATGTACTCATATC
EV542983       <-- ..................................................
EX900337       <-- ..................................................
FD555020       <-- ..................................................
FD937271       <-- ..................................................
FD573621       <-- ..................................................
FD935285       <-- TGGAGGTGGTATATGAGCTATTTACAAATAGAAATACATGTACTCATATC
FD974857       <-- ..................................................
FD973444       --> ..................................................
FD544044       --> ..................................................
FD550151       --> ..................................................
EX896402       --> ..................................................
FD939077       --> ..................................................
FD941683       --> ..................................................
EV539110       --> ..................................................
EV548431       --> ..................................................
EV548997       --> ..................................................
EW733788       --> ..................................................
FD569407       --> ..................................................
FD958168       --> ..................................................
FY442214       --> ..................................................
FD559289       --> ..................................................

               1001   -   1051
UN14018        --> CAAAGCTAATAATAGAAACCGTCATCTGGAAGGAAAGTTTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544566       <-- ...........................................
EV544102       <-- ...........................................
FD546127       <-- CAAAGCTAATAATAGAAACCGTCATCTcg..............
FD539734       <-- ...........................................
EW720913       <-- CAAAGCTAATAATAGAAACCGTCATCTGGAAGGAAAGTTTGAT
EV542983       <-- ...........................................
EX900337       <-- ...........................................
FD555020       <-- ...........................................
FD937271       <-- ...........................................
FD573621       <-- ...........................................
FD935285       <-- CAAAGCTAATAATAGAAACCGTCATCTGG..............
FD974857       <-- ...........................................
FD973444       --> ...........................................
FD544044       --> ...........................................
FD550151       --> ...........................................
EX896402       --> ...........................................
FD939077       --> ...........................................
FD941683       --> ...........................................
EV539110       --> ...........................................
EV548431       --> ...........................................
EV548997       --> ...........................................
EW733788       --> ...........................................
FD569407       --> ...........................................
FD958168       --> ...........................................
FY442214       --> ...........................................
FD559289       --> ...........................................