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Alignment for radish unigene UN14050

               1      -     51
UN14050        --> GGGATTAACGACCATCATCGTCTCCGCGAGTTCCTCTCTGCATCATCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736489       <-- ..................................................
EX908923       <-- ..................................................
FD565648       <-- ..................................................
FD573608       <-- ..................................................
FD985200       <-- ..................................................
FD950565       <-- ..................................................
FD934701       <-- ..................................................
FD983404       <-- ..................................................
EX907561       <-- ..................................................
FD561497       --> GGGATTAACGACCATCATCGTCTCCGCGAGTTCCTCTCTGCATCATCAAG
FD954279       --> ..................................aggggGCATCATCAAG
EX887573       --> ................................................aa
EX903519       --> ..................................................
EX905156       --> ..................................................
EY912902       --> ..................................................
FD987333       --> ..................................................
FD989418       --> ..................................................
FD938288       --> ..................................................
EY938146       --> ..................................................
FD569392       --> ..................................................
FD561079       --> ..................................................
FD980534       --> ..................................................

               51     -    101
UN14050        --> AGGCCATATAATAATTAAAAAAGTCGTTCCTTTTAGGATTCCTTCTTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736489       <-- ..................................................
EX908923       <-- ..................................................
FD565648       <-- ..................................................
FD573608       <-- ..................................................
FD985200       <-- ..................................................
FD950565       <-- ..................................................
FD934701       <-- ..................................................
FD983404       <-- ..................................................
EX907561       <-- ..................................................
FD561497       --> -GGCCATATAATAATTAAAAAAGTCGTTCCTTTTATCATTCCTTCTTCTC
FD954279       --> AGGCCATATAATAATTAAAAAAGTCGTTCCTTTTATCATTCCTTCTTCTC
EX887573       --> gGGCCATATAATAATTAAAAAAGTCGTTCCTTTTATCATTCCTTCTTCTC
EX903519       --> ...................................GGATTCCTTCTTCTC
EX905156       --> ...................................GGATTCCTTCTTCTC
EY912902       --> ...................................GGATTCCTTCTTCTC
FD987333       --> ...................................GGATTCCTTCTTCTC
FD989418       --> ..................................................
FD938288       --> ..................................................
EY938146       --> ..................................................
FD569392       --> ..................................................
FD561079       --> ..................................................
FD980534       --> ..................................................

               101    -    151
UN14050        --> TCACACTTTGTCTTTCCAAATTAAAAAAAAA--TCCAAGGTGTGATCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736489       <-- ..................................................
EX908923       <-- ..................................................
FD565648       <-- ..................................................
FD573608       <-- ..................................................
FD985200       <-- ..................................................
FD950565       <-- ..................................................
FD934701       <-- ..................................................
FD983404       <-- ..................................................
EX907561       <-- ..................................................
FD561497       --> TCACACTTTGTCTTTCCAAATTAAAAAAAAA--TCCAAGGTGTGATCCTC
FD954279       --> TCACACTTTGTCTTTCCAAATTAAAAAAAAA--TCCAAGGTGTGATCCTC
EX887573       --> TCACACTTTGTCTTTCCAAATTAAAAAAAAA--TCCAAGGTGTGATCCTC
EX903519       --> TCACACTTTGTCTTTCCAAATTAAAAAAAAA--TCCAAGGTGTGATCCTC
EX905156       --> TCACACTTTGTCTTTCCAAATTAAAAAAAAA--TCCAAGGTGTGATCCTC
EY912902       --> TCACACTT-GTCTTTCCAAATTAAAAAAAAA--TCCAAGGTGTGATCCTC
FD987333       --> TCACACTT-GTCTTTCCAAATTAAAAAAAAA--TCCAAGGTGTGATCCTC
FD989418       --> ggACACTTTGTCTTTCCAAATTAAAAAAAAAAATCCAAGGTGTGATCCTC
FD938288       --> .......ggGTCTTTCCAAATTAAAAAAAAA--TCCAAGGTGTGATCCTC
EY938146       --> ..................................................
FD569392       --> ..................................................
FD561079       --> ..................................................
FD980534       --> ..................................................

               151    -    201
UN14050        --> TTCAAGGGGGAGCAGGTTCAATACATTCTTACCGATCTAAAGCACTGGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736489       <-- ..................................................
EX908923       <-- ..................................................
FD565648       <-- ..................................................
FD573608       <-- ..................................................
FD985200       <-- ..................................................
FD950565       <-- ..................................................
FD934701       <-- ..................................................
FD983404       <-- ..................................................
EX907561       <-- ..................................................
FD561497       --> TTCAAGGGGGAGCAGGTTCAATACATTCTTACCGATCTAAAGCACTGGGG
FD954279       --> TTCAAGGGGGAGCAGGTTCAATACATTCTTACCAATCTAAAGCACTGGGG
EX887573       --> TTCAAGGGGGAGCAGGTTCAATACATTCTTACCGATCTAAAGCACTGGGG
EX903519       --> TTCAAGGGGGAGCAGGTTCAATACATTCTTACCGATCTAAAGCACTGGGG
EX905156       --> TTCAAGGGGGAGCAGGTTCAATACATTCTTACCGATCTAAAGCACTGGGG
EY912902       --> TTCAAGGGGGAGCAGGTTCAATACATTCTTACCGATCTAAAGCACTGGGG
FD987333       --> TTCAAGGGGGAGCAGGTTCAATACATTCTTACCGATCTAAAGCACTGGGG
FD989418       --> TTCAAGGGGGAGCAGGTTCAATACATTCTTACCGATCTAAAGCACTGGGG
FD938288       --> TTCAAGGGGGAGCAGGTTCAATACATTCTTACCGATCTAAAGCACTGGGG
EY938146       --> ..................................................
FD569392       --> ..................................................
FD561079       --> ..................................................
FD980534       --> ..................................................

               201    -    251
UN14050        --> CACTCTTGTCGGTGAATAGAGACAGACAAAAAGGAAGAGATAATGGGGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736489       <-- ..................................................
EX908923       <-- ..................................................
FD565648       <-- ..................................................
FD573608       <-- ..................................................
FD985200       <-- ..................................................
FD950565       <-- ..................................................
FD934701       <-- ..................................................
FD983404       <-- ..................................................
EX907561       <-- ..................................................
FD561497       --> CACTCTTGTCGG-------AGACAGACAAAAAGGAAGAGATAATGGGGGT
FD954279       --> CACTCTTGTCGGTGAATAGAGACAGACAAAAAGGAAGAGATAATGGGGGT
EX887573       --> CACTCTTGTCGGTGAATAGAGACAGACAAAAAGGAAGAGATAATGGGGGT
EX903519       --> CACTCTTGTCGGTGAATAGAGACAGACAAAAAGGAAGAGATAATGGGGGT
EX905156       --> CACTCTTGTCGGTGAATAGAGACAGACAAAAAGGAAGAGATAATGGGGGT
EY912902       --> CACTCTTGTCGGTGAATAGAGA--GAC-AAAAGGAAAAGATAATGGGGGT
FD987333       --> CACTCTTGTCGGTGAATAGAGACAGACAAAA-GGAGAAGATAATGGGGGT
FD989418       --> CACTCTTGTCGGTGAATAGAGACGGACAAAA-GGAGAAGATAATGGGGGT
FD938288       --> CACTCTTGTCGGTGAATAGAGACAGACAAAAAGGAAGAGATAATGGGGGT
EY938146       --> .....cattaaGTGAATAGAGACAGACAAAAAGGAAGAGATAATGGGGGT
FD569392       --> ......................................gggAATGGGGGT
FD561079       --> ..................................................
FD980534       --> ..................................................

               251    -    301
UN14050        --> TCCGTTAGTATGCCACGGGCATTCTCGTCCCGTCGTCGACGTTTCTTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736489       <-- ..................................................
EX908923       <-- ..................................................
FD565648       <-- ..................................................
FD573608       <-- ..................................................
FD985200       <-- ..................................................
FD950565       <-- ..................................................
FD934701       <-- ..................................................
FD983404       <-- ..................................................
EX907561       <-- ..................................................
FD561497       --> TCCGTTAGTATGCCACGGGCATTCTCGTCCCGTCGTCGACGTTTCTTACA
FD954279       --> TCCGTTAGTATGCCACGGGCATTCTCGTCCCGTCGTCGACGTTTCTTACA
EX887573       --> TCCGTTAGTATGCCACGGGCATTCTCGTCCCGTCGTCGACGTTTCTTGCA
EX903519       --> TCCGTTAGTATGCCACGGGCATTCTCGTCCCGTCGTCGACGTTTCTTACA
EX905156       --> TCCGTTAGTATGCCACGGGCATTCTCGTCCCGTCGTCGACGTTTCTTACA
EY912902       --> TCCGTTAGTATGCCACGGGCATTCTCGTCCCGTCGTCGACGTTTCTTACA
FD987333       --> TCCGTTAGTATGCCACGGGCATTCTCGTCCCGTCGTCGACGTTTCTTACA
FD989418       --> TCCGTTAGTATGCCACGGGCATTCTCGTCCCGTCGTCTACGTTTCTTACA
FD938288       --> TCCGTTAGTATGCCACGGGCATTCTCGTCCCGTCGTCGACGTTTCTTACA
EY938146       --> TCCGTTAGTATGCCACGGGCATTCTCGTCCCGTCGTCGACGTTTCTTACA
FD569392       --> TCCGTTAGTATGCCACGGGCATTCTCGTCCCGTCGTCGACGTTTCTTACA
FD561079       --> ..................................................
FD980534       --> ..................................................

               301    -    351
UN14050        --> GTCCGGTGACTCCAGATGGATTCTTCCTCATCAGCGCCAGCAAAGATTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736489       <-- ..................................................
EX908923       <-- ..................................................
FD565648       <-- ..................................................
FD573608       <-- ..................................................
FD985200       <-- ..................................................
FD950565       <-- ..................................................
FD934701       <-- ..................................................
FD983404       <-- ..................................................
EX907561       <-- ..................................................
FD561497       --> GTCCGGTGACTCCAGATGGATTCTTCCTCATCAGCGCCAGCAAAGATTCG
FD954279       --> GTCCGGTGACTCCAGATGGATTCTTCCTCATCAGCGCCAGCAAAGATTCG
EX887573       --> GTCCGGTGACTCCAGATGGATTCTTCCTCATCAGCGCCAGCAAAGATTCG
EX903519       --> GTCCGGTGACTCCAGATGGATTCTTCCTCATCAGCGCCAGCAAAGATTCG
EX905156       --> GTCCGGTGACTCCAGATGGATTCTTCCTCATCAGCGCCAGCAAAGATTCG
EY912902       --> GTCCTGTGACTCCAGATGGATTCTTCCTCATCAGCGCCAGCAAAGATTCT
FD987333       --> GTCCGGTGACTCCAGATGGATTCTTCCTCATCAGCGCCAGCAAAGATTCG
FD989418       --> GTCCGGTGACTCCAGATGGATTCTTCCTCATCAGCGCCAGCAAAGATTCG
FD938288       --> GTCCGGTGACTCCAGATGGATTCTTCCTCATCAGCGCCAGCAAAGATTCG
EY938146       --> GTCCGGTGACTCCAGATGGATTCTTCCTCATCAGCGCCAGCAAAGATTCG
FD569392       --> GTCCGGTGACTCCAGATGGATTCTTCCTCATCAGCGCCAGCAAAGATTCG
FD561079       --> ..................................................
FD980534       --> ..................................................

               351    -    401
UN14050        --> AACCCAATGTTGAGGAATGGGGAGACTGGTGATTGGATAGGGACTTTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736489       <-- ..................................................
EX908923       <-- ..................................................
FD565648       <-- ..................................................
FD573608       <-- ..................................................
FD985200       <-- ..................................................
FD950565       <-- ..................................................
FD934701       <-- ..................................................
FD983404       <-- ..................................................
EX907561       <-- ..................................................
FD561497       --> AACCCAATGTTGAGGAATGGGGAGACTGGTGATTGGATAGGGACTTTTGA
FD954279       --> AACCCAATGCTGAGGAATGGGGAGACTGGTGATTGGATAGGGACTTTTGA
EX887573       --> AACCCAATGTTGAGGAATGGGGAGACTGGTGATTGGATAGGGACTTTTGA
EX903519       --> AACCCAATGCTGAGGAATGGGGAGACTGGTGATTGGATAGGGACTTTTGA
EX905156       --> AACCCAATGCTGAGGAATGGGGAGACTGGTGATTGGATAGGGACTTTTGA
EY912902       --> AACCCAATGCTGAGGAATGGGGAGACTGGTGATTGGATAGGGACTTTTGA
FD987333       --> AACCCAATGTTGAGGAATGGGGAGACTGGTGATTGGATAGGGACTTTTGA
FD989418       --> AACCCAATGTTGAGGAATGGGGAGACTGGTGATTGGATAGGGACTTTTGA
FD938288       --> AACCCAATGTTGAGGAATGGGGAGACTGGTGATTGGATAGGGACTTTTGA
EY938146       --> AACCCAATGTTGAGGAATGGGGAGACTGGTGATTGGATAGGGACTTTTGA
FD569392       --> AACCCAATGCTGAGGAATGGGGAGACTGGTGATTGGATAGGGACTTTTGA
FD561079       --> ..................................................
FD980534       --> ..................................................

               401    -    451
UN14050        --> AGGACATAAAGGAGCAGTTTGGAGTTGCAGCCTTGATAAACATGCTATGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736489       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX908923       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD565648       <-- ..................................................  Raphanus sativus var. oleiformis
FD573608       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD985200       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD950565       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD934701       <-- ..................................................  Raphanus sativus var. oleiformis
FD983404       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX907561       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD561497       --> AGGACACAAAGGAGCTGTTTGGAGTTGCAGCCTTGATAAACATGCTATGC  Raphanus sativus var. oleiformis
FD954279       --> AGGACATAAAGGAGCAGTTTGGAGTTGCAGCCTTGATAAACATGCTATGC  Raphanus sativus cv Rat-Tail Radish #3870
EX887573       --> AGGACACAAAGGAGCTGTTTGGAGTTGCAGCCTTGATAAACATGCTATGC  Raphanus sativus var. oleiformis
EX903519       --> AGGACATAAAGGAGCAGTTTGGAGTTGCAGCCTTGATAAACATGCTATGC  Raphanus sativus cv Rat-Tail Radish #3870
EX905156       --> AGGACATAAAGGAGCAGTTTGGAGTTGCAGCCTTGATAAACATGCTATGC  Raphanus sativus cv Rat-Tail Radish #3870
EY912902       --> AGGACATAAAGGAGCAGTTTGGAGTTGCAGCCTTGATAAACATGCTATGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD987333       --> AGGACATAAAGGAGCAGTTTGGAGTTGCAGCCTTGATAAACATGCTATGC  Raphanus raphanistrum subsp. landra
FD989418       --> AGGACATAAAGGAGCAGTTTGGAGTTGCAGCCTTGATAAACATGCTATGC  Raphanus raphanistrum subsp. landra
FD938288       --> AGGACACAAAGGAGCTGTTTGGAGTTGCAGCCTTGATAAACATGCTATGC  Raphanus sativus var. oleiformis
EY938146       --> AGGACACAAAGGAGCTGTTTGGAGTTGCAGCCTTGATAAACATGCTATGC  Raphanus sativus cv Early Scarlet Globe
FD569392       --> AGGACATAAAGGAGCAGTTTGGAGTTGCAGCCTTGATAAACATGCTATGC  Raphanus sativus cv Early Scarlet Globe
FD561079       --> ..................................................  Raphanus sativus var. oleiformis
FD980534       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               451    -    501
UN14050        --> GCGCTGCCTCTGCTTCTGCTGATTTCACTGCGAAAATATGGAATGCATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736489       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX908923       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD565648       <-- ..................................................  Raphanus sativus var. oleiformis
FD573608       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD985200       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD950565       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD934701       <-- ..................................................  Raphanus sativus var. oleiformis
FD983404       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX907561       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD561497       --> GTGCTGCCTCTGCTTCTGCTGATTTCACTGCGAAAATATGGAATGCATTG  Raphanus sativus var. oleiformis
FD954279       --> GCGCTGCCTCTGCTTCTGCTGATTTCACTGCGAAAATATGGAACGCATTG  Raphanus sativus cv Rat-Tail Radish #3870
EX887573       --> GTGCTGCCTCTGCTTCTGCTGATTTCACTGCGAAAATATGGAATGCATTG  Raphanus sativus var. oleiformis
EX903519       --> GCGCTGCCTCTGCTTCTGCTGATTTCACTGCGAAAATATGGAACGCATTG  Raphanus sativus cv Rat-Tail Radish #3870
EX905156       --> GCGCTGCCTCTGCTTCTGCTGATTTCACTGCGAAAATATGGAACGCATTG  Raphanus sativus cv Rat-Tail Radish #3870
EY912902       --> GCGCTGCCTCTGCTTCTGCTGATTTCACTGCGAAAATATGGAATGCATTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD987333       --> GCGCTGCCTCTGCTTCTGCTGATTTCACTGCGAAAATATGGAATGCATTG  Raphanus raphanistrum subsp. landra
FD989418       --> GCGCTGCCTCTGCTTCTGCTGATTTCACTGCGAAAATATGGAATGCATTG  Raphanus raphanistrum subsp. landra
FD938288       --> GTGCTGCCTCTGCTTCTGCTGATTTCACTGCGAAAATATGGAATGCATTG  Raphanus sativus var. oleiformis
EY938146       --> GTGCTGCCTCTGCTTCTGCTGATTTCACTGCGAAAATATGGAATGCATTG  Raphanus sativus cv Early Scarlet Globe
FD569392       --> GCGCTGCCTCTGCTTCTGCTGATTTCACTGCGAAAATATGGAACGCATTG  Raphanus sativus cv Early Scarlet Globe
FD561079       --> ..................................................  Raphanus sativus var. oleiformis
FD980534       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               501    -    551
UN14050        --> ACTGGAGATGAATTGCACTCCTTTGAACACAAGCACATCGTTCGCGCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736489       <-- ..............................AAGCACATCGTTCGCGCATG
EX908923       <-- ..................................................
FD565648       <-- ..................................................
FD573608       <-- ..................................................
FD985200       <-- ..................................................
FD950565       <-- ..................................................
FD934701       <-- ..................................................
FD983404       <-- ..................................................
EX907561       <-- ..................................................
FD561497       --> ACTGGAGATGAATTGCACTCCTTTGAACACAAGCACATCGTTCGCGCATG
FD954279       --> ACTGGAGATGAATTGCACTCCTTTGAACACAAGCACATCGTTCGCGCATG
EX887573       --> ACTGGAGATGAATTGCACTCCTTTGAACACAAGCACATCGTTCGCGCATG
EX903519       --> ACTGGAGATGAATTGCACTCCTTTGAACACAAGCACATCGTTCGCGCATG
EX905156       --> ACTGGAGATGAATTGCACTCCTTTGAACACAAGCACATCGTTCGCGCATG
EY912902       --> ACTGGAGATGAATTGCACTCCTTTGAACACAAGCACATTGTTCGTGCATG
FD987333       --> ACTGGAGATGAATTGCACTCCTTTGAACACAAGCACATCGTTCGCGCATG
FD989418       --> ACTGGAGATGAATTGCACTCCTTTGAACACAAGCACATCGTTCGCGCATG
FD938288       --> ACTGGAGATGAATTGCACTCCTTTGAACACAAGCACATCGTTCGCGCATG
EY938146       --> ACTGGAGATGAATTGCACTCCTTTGAACACAAGCACATCGTTCGCGCATG
FD569392       --> ACTGGAGATGAATTGCACTCCTTTGAACACAAGCACATCGTTCGCGCATG
FD561079       --> ..................................................
FD980534       --> ..................................................

               551    -    601
UN14050        --> TGCCTTCTCTGAGGACACTCACCTTTTGCTCACCGGTGGAATGGAGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736489       <-- TGCCTTCTCTGAGGACACTCACCTTTTGCTCACCGGTGGAATGGAGAAGA  Raphanus sativus cv Rat-Tail Radish #3870
EX908923       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD565648       <-- ..................................................  Raphanus sativus var. oleiformis
FD573608       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD985200       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD950565       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD934701       <-- ..................................................  Raphanus sativus var. oleiformis
FD983404       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX907561       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD561497       --> TGCCTTCTCCGAGGATACTCATCTTTTGCTCACTGGTGGAATGGAGAAGA  Raphanus sativus var. oleiformis
FD954279       --> TGCCTTCTCTGAGGACACTCACCTTTTGCTTACCGGTGGAATGGAGAAGA  Raphanus sativus cv Rat-Tail Radish #3870
EX887573       --> TGCCTTCTCCGAGGATACTCATCTTTTGCTCACTGGTGGAATGGAGAAGA  Raphanus sativus var. oleiformis
EX903519       --> TGCCTTCTCTGAGGACACTCACCTTTTGCTTACCGGTGGAATGGAGAAGA  Raphanus sativus cv Rat-Tail Radish #3870
EX905156       --> TGCCTTCTCTGAGGACACTCACCTTTTGCTTACCGGTGGAATGGAGAAGA  Raphanus sativus cv Rat-Tail Radish #3870
EY912902       --> TGCCTTCTCTGAGGACACTCACCTTTTGCTCACCGGTGGAATGGAGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD987333       --> TGCCTTCTCTGAGGACACTCACCTTTTGCTCACCGGTGGAATGGAGAAGA  Raphanus raphanistrum subsp. landra
FD989418       --> TGCCTTCTCTGAGGACACTCACCTTTTGCTCACCGGTGGAATGGAGAAGA  Raphanus raphanistrum subsp. landra
FD938288       --> TGCCTTCTCCGAGGATACTCATCTTTTGCTCACTGGTGGAATGGAGAAGA  Raphanus sativus var. oleiformis
EY938146       --> TGCCTTCTCCGAGGATACTCATCTTTTGCTCACTGGTGGAATGGAGAAGA  Raphanus sativus cv Early Scarlet Globe
FD569392       --> TGCCTTCTCTGAGGACACTCACCTTTTGCTTACCGGTGGAATGGAGAAGA  Raphanus sativus cv Early Scarlet Globe
FD561079       --> ..................................................  Raphanus sativus var. oleiformis
FD980534       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               601    -    651
UN14050        --> TTCTTCGGATATTCGATATGAACAGGCCAGACGCACCTCC-TAAAGAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736489       <-- TTCTTCGGATATTCGATATGAATAGGCCAGACGCACCTCC-AAAAGAAGT  Raphanus sativus cv Rat-Tail Radish #3870
EX908923       <-- .........................................TAAAGAAGT  Raphanus sativus cv Rat-Tail Radish #3870
FD565648       <-- ..........................................AAAGAAGT  Raphanus sativus var. oleiformis
FD573608       <-- ...........................................AAGAAGT  Raphanus sativus cv Early Scarlet Globe
FD985200       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD950565       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD934701       <-- ..................................................  Raphanus sativus var. oleiformis
FD983404       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX907561       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD561497       --> TTCTTCGGATATTCGATATGAATAGGCCAGACGCACCTCC-CAAAGAAGT  Raphanus sativus var. oleiformis
FD954279       --> TTCTTCGGATATTCGATATGAACAGGCCAGACGCACCTCCCTAAAGAAGT  Raphanus sativus cv Rat-Tail Radish #3870
EX887573       --> TTCTTCGGATATTCGATATGAATAGGCCAGACGCACCTCC-CAAAGAAGT  Raphanus sativus var. oleiformis
EX903519       --> TTCTTCGGATATTCGATATGAACAGGCCAGACGCACCTCC-TAAAGAAGT  Raphanus sativus cv Rat-Tail Radish #3870
EX905156       --> TTCTTCGGATATTCGATATGAACAGGCCAGACGCACCTCC-TAAAGAAGT  Raphanus sativus cv Rat-Tail Radish #3870
EY912902       --> TTCTTCGGATATTCGATATGAACAGGCCAGACGCACCTCC-TAAAGAAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD987333       --> TTCTTCGGATATTCGATATGAACAGGCCAGACGCACCTCC-TAAAGAAGT  Raphanus raphanistrum subsp. landra
FD989418       --> TTCTTCGGATATTCGATATGAACAGGCCAGACGCACCTCC-TAAAGAAGT  Raphanus raphanistrum subsp. landra
FD938288       --> TTCTTCGGATATTCGATATGAATAGGCCAGACGCACCTCC-CAAAGAAGT  Raphanus sativus var. oleiformis
EY938146       --> TTCTTCGGATATTCGATATGAATAGGCCAGACGCACCTCC-CAAAGAAGT  Raphanus sativus cv Early Scarlet Globe
FD569392       --> TTCTTCGGATATTCGATATGAACAGGCCAGACGCACCTCC-TAAAGAAGT  Raphanus sativus cv Early Scarlet Globe
FD561079       --> ..................................................  Raphanus sativus var. oleiformis
FD980534       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               651    -    701
UN14050        --> TGGAAACTCTCCTGGTTCAATCAGAACCGTAGAATGGCTTCACAGTGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736489       <-- TGGAAACTCTCCTGGTTCAATCAGAACAGTAGAATGGCTTCACAGTGATA  Raphanus sativus cv Rat-Tail Radish #3870
EX908923       <-- TGGAAACTCTCCTGGTTCAATCAGAACCGTAGAATGGCTTCACAGTGATA  Raphanus sativus cv Rat-Tail Radish #3870
FD565648       <-- TGGAAATTCTCCTGGTTCAATCAGAACCGTAGAATGGCTTCACAGTGATA  Raphanus sativus var. oleiformis
FD573608       <-- TGGAAACTCTCCTGGTTCAATCAGAACCGTAGAATGGCTTCACAGTGATA  Raphanus sativus cv Early Scarlet Globe
FD985200       <-- ...............TTCAATCAGAACCGTAGAATGGCTTCACAGTGATA  Raphanus raphanistrum subsp. landra
FD950565       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD934701       <-- ..................................................  Raphanus sativus var. oleiformis
FD983404       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX907561       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD561497       --> TGGAAATTCTCCTGGTTCAATCAGAACCGTAGAATGGCTTCACAGTGATA  Raphanus sativus var. oleiformis
FD954279       --> TGGAAACTCTCCTGGTTCAATCAGAACCGTAGAATGGCTTCACAGTGATA  Raphanus sativus cv Rat-Tail Radish #3870
EX887573       --> TGGAAATTCTCCTGGT-CAATCAGAACCGTAGA-TGGCTTCACAGTGATA  Raphanus sativus var. oleiformis
EX903519       --> TGGAAACTCTCCTGGTTCAATCAGAACCGTAGAATGGCTTCACAGTGATA  Raphanus sativus cv Rat-Tail Radish #3870
EX905156       --> TGGAAACTCTCCTGGTTCAATCAGAACCGTAGAATGGCTTCACAGTGATA  Raphanus sativus cv Rat-Tail Radish #3870
EY912902       --> TGGGAACTCTCCTGGTTCAATCAGAACCGTAGAATGGCTTCACAGTGATA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD987333       --> TGGAAACTCTCCTGGTTCAATCAGAACCGTAGAATGGCTTCACAGTGATA  Raphanus raphanistrum subsp. landra
FD989418       --> TGGAAACTCTCCTGTTTCAATCAGAACCGTAGAATGGCTTCACAGTGATA  Raphanus raphanistrum subsp. landra
FD938288       --> TGGAAATTCTCCTGGTTCAATCAGAACCGTAGAATGGCTTCACAGTGATA  Raphanus sativus var. oleiformis
EY938146       --> TGGAAATTCTCCTGGTTCAATCAGAACCGTAGAATGGCTTCACAGTGATA  Raphanus sativus cv Early Scarlet Globe
FD569392       --> TGGAAACTCTCCTGGTTCAATCAGAACCGTAGAATGGCTTCACAGTGATA  Raphanus sativus cv Early Scarlet Globe
FD561079       --> gGGAAATTCTCCTGGTTCAATCAGAACCGTAGAATGGCTTCACAGTGATA  Raphanus sativus var. oleiformis
FD980534       --> .gggAACTCTCCTGGTTCAATCAGAACCGTAGAATGGCTTCACAGTGATA  Raphanus raphanistrum subsp. raphanistrum (NY)

               701    -    751
UN14050        --> ATACTATCCTGAGCTCTTGCACAGATACCGGTGACATTAGGTTATGGGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736489       <-- ATACTATCCTGAGCTCTTGCACAGATACCGGTGACATTAGGTTATGGGAC
EX908923       <-- ATACTATCCTGAGTTCTTGCACAGATACCGGTGCCATTAGGTTATGGGAC
FD565648       <-- ATACTATCCTGAGCTCTTGCACAGATACCGGTGACATTAGGTTATGGGAC
FD573608       <-- ATACTATCCTGAGTTCTTGCACAGATACCGGTGACATTAGGTTATGGGAC
FD985200       <-- ATACTATCCTGAGCTCTTGCACAGATACCGGTGACATTAGGTTATGGGAC
FD950565       <-- ..................................................
FD934701       <-- ..................................................
FD983404       <-- ..................................................
EX907561       <-- ..................................................
FD561497       --> ATACTATCCTGAGCTCTTGCACAGATACCGGTGACATTAGGT-ATGGGAC
FD954279       --> ATACTATCCTGAGTTCTTGCACAGATACCGGTGACATTAG-TTATGGGAC
EX887573       --> ATACTATCCTGAGCTCTTGCACAGATACCGGTGACA..............
EX903519       --> ATACTATCCTGAGTTCTTGCACAGATACCGGTGcca..............
EX905156       --> ATACTATCCTGAGTTCTTGCACAGATACCGGTGCCAT.............
EY912902       --> ATACTATCCTGAGCTCTTGCGCAGATACCGGTGACATTGGGTTATGGGAC
FD987333       --> ATACTATCCTGAGCTCTTGCACAGATACCGGTGACATTATGTTATGGGAC
FD989418       --> ATACTATCCTGAGCTCTTGCACAGATACCGGTGACATTAGGTTATGGGAC
FD938288       --> ATACTATCCTGAGCTCTTGCACAGATACCGGTGACATTAGGTTATGGGAC
EY938146       --> ATACTATCCTGAGCTCTTGCACAGATACCGGTGACATTAGGTTATGGGAC
FD569392       --> ATACTATCCTGAGTTCTTGCACAGATACCGGTGACATTAGGTTATGGGAC
FD561079       --> ATACTATCCTGAGCTCTTGCACAGATACCGGTGACATTAGGTTATGGGAC
FD980534       --> ATACTATCCTGAGCTCTTGCACAGATACCGGTGACATTAGGTTATGGGAC

               751    -    801
UN14050        --> ATAAGAAGTGACAAGATTGTTCAAACATTAGAAACCAAGTTCCCAGTCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736489       <-- ATAAGAAGTGACAAGATTGTTCAAACATTAGAAACCAAGTTCCCAGTCAC
EX908923       <-- ATAAGAAGTGACAAGATTGTTCAAACATTAGAAACCAAGTTCCCAGTCAC
FD565648       <-- ATAAGAAGTGACAAGATTGTTCAAACACTAGAAACCAAGTTCCCAGTCAC
FD573608       <-- ATAAGAAGTGACAAGATTGTTCAAACATTAGAAACCAAGTTCCCAGTCAC
FD985200       <-- ATAAGAAGTGACAAGATTGTTCAAACATTAGAAACCAAGTTCCCAGTGAC
FD950565       <-- ..................................................
FD934701       <-- ..................................................
FD983404       <-- ..................................................
EX907561       <-- ..................................................
FD561497       --> A.................................................
FD954279       --> ATAAGAAGTGACAAG...................................
EX887573       --> ..................................................
EX903519       --> ..................................................
EX905156       --> ..................................................
EY912902       --> ATAAGAAGTGACAAGATTGTTCAAACATTAGAAACCAAGTTCCCAGTga.
FD987333       --> ATAAGAAGTGGCAAGATTGTTCAAACATTAGAAACC..............
FD989418       --> ATAAGAAGTGACAAGATTGTTCAAACATTAGAAACCAAGTTCCCAGTGAC
FD938288       --> ATAAGAAGTGACAAGATTGTTCAAACACTAGAAACCAAGTTCCCAGTCAC
EY938146       --> ATAAGAAGTGACAAGATTGTTCAAca........................
FD569392       --> ATAAGAAGTGACAAGATTGTTCAAACATTAGAAACCAAGTTCCCAGTCAC
FD561079       --> ATAAGAAGTGACAAGATTGTTCAAACACTAGAAACCAAGTTCCCAGTCAC
FD980534       --> ATAAGAAGTGACAAGATTGTTCAAACATTAGAAACCAAGTTCCCAGTGAC

               801    -    851
UN14050        --> TAGTGCTGAAGTAAGCCAGGATGGGCGATACATAACTACTGCTGATGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736489       <-- TAGTGCTGAAGTAAGCCAGGATGGGCGATACATAACTACTGCTGATGGAT
EX908923       <-- TAGTGCTGAAGTAAGCCAGGATGGGCGATACATAACTACTGCTGATGGAT
FD565648       <-- TAGTGCTGAAGTAAGCCAGGATGGGCGATACATAACTACTGCTGATGGAT
FD573608       <-- TAGTGCTGAAGTAAGCCAGGATGGGCGATACATAACTACTGCTGATGGAT
FD985200       <-- TAGTGCTGAAGTAAGCCAGGATGGGCGATACATAACTACTGCTGATGGAT
FD950565       <-- .........AGTAAGCCAGGATGGGCGATACATAACTACTGCTGATGGAT
FD934701       <-- ................................................AT
FD983404       <-- ..................................................
EX907561       <-- ..................................................
FD561497       --> ..................................................
FD954279       --> ..................................................
EX887573       --> ..................................................
EX903519       --> ..................................................
EX905156       --> ..................................................
EY912902       --> ..................................................
FD987333       --> ..................................................
FD989418       --> TAGTGCTGAAGTAAGCCAGGATGGGCGATACATA-CTACTGCTGATGGAT
FD938288       --> TAGTGCTGAAGTAAGCCAGGATGGGCGATACATAACTACTGCTGATGGAT
EY938146       --> ..................................................
FD569392       --> TAGTGCTGAAGTAAGCCAGGATGGGCGATACATAACTACTGCTGATGGAT
FD561079       --> TAGTGCTGAAGTAAGCCAGGATGGGCGATACATAACTACTGCTGATGGAT
FD980534       --> TAGTGCTGAAGTAAGCCAGGATGGGCGATACATAACTACTGCTGATGGAT

               851    -    901
UN14050        --> CTAGTGTTAAGTTTTGGGACGCCACTAATTTTGGATTGGTCAAGAGCTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736489       <-- CTAGTGTTAAGTTTTGGGACGCCACTAATTTTGGATTGGTCAAGAGCTAT
EX908923       <-- CTAGTGTTAAGTTTTGGGACGCCACTAATTTTGGATTGGTCAAGAGCTAT
FD565648       <-- CTAGTGTTAAGTTTTGGGACGCCACTAATTTTGGATTGGTCAAGAGCTAT
FD573608       <-- CTAGTGTTAAGTTTTGGGACGCCACTAATTTTGGATTGGTCAAGAGCTAT
FD985200       <-- CTAGTGTTAAGTTTTGGGACGCCACTAATTTCGGATTGGTCAAGAGCTAT
FD950565       <-- CTAGTGTTAAGTTTTGGGACGCCACTAATTTTGGATTGGTCAAGAGCTAT
FD934701       <-- CTAGTGTTAAGTTTTGGGACGCCACTAATTTTGGATTGGTCAAGAGCTAT
FD983404       <-- ..................................................
EX907561       <-- ..................................................
FD561497       --> ..................................................
FD954279       --> ..................................................
EX887573       --> ..................................................
EX903519       --> ..................................................
EX905156       --> ..................................................
EY912902       --> ..................................................
FD987333       --> ..................................................
FD989418       --> CTAGTGTTAAGTTTTGGGACGCCA..........................
FD938288       --> CTAGTGTTAAGTTT-GGGACGCCACTAATTT-GGA-TGGTCA-GAGCTAT
EY938146       --> ..................................................
FD569392       --> CTAGTGTTAAGTTTTGGGACGCCACTAATTTTGGATTGGTCAAGAGCTAT
FD561079       --> CTAGTGTTAAGTTTTGGGACGCCACTAATTTTGGATTGGTCAAGAGCTAT
FD980534       --> CTAGTGTTAAGTTTTGGGACGCCACTAATTTTGGATTGGTCAAGAGCTAT

               901    -    951
UN14050        --> GAGATGCCTTGCAACGTTGAATCAGCATCCTTGGAACCGAAACAAGGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736489       <-- GAGATGCCTTGCAACGTTGAATCAGCATCATTGGAACCGAAACACGGGAA
EX908923       <-- GAGATGCCTTGCAACGTTGAATCAGCATCCTTGGAACCGAAACAAGGGAA
FD565648       <-- GAGATGCCTTGCAACGTTGAATCAGCATCCTTGGAACCGAAACAAGGGAA
FD573608       <-- GAGATGCCTTGCAACGTTGAATCAGCATCCTTGGAACCGAAACAAGGGAA
FD985200       <-- GAGATGCCTTGCAACGTTGAATCAGCATCCTTGGAACCGAAACACGGGAA
FD950565       <-- GAGATGCCTTGCAACGTTGAATCAGCATCCTTGGAACCGAAACAAGGGAA
FD934701       <-- GAGATGCCTTGCAACGTTGAATCAGCATCCTTGGAACCGAAACAAGGGAA
FD983404       <-- ..................................................
EX907561       <-- ..................................................
FD561497       --> ..................................................
FD954279       --> ..................................................
EX887573       --> ..................................................
EX903519       --> ..................................................
EX905156       --> ..................................................
EY912902       --> ..................................................
FD987333       --> ..................................................
FD989418       --> ..................................................
FD938288       --> GAGATGCCTTGCA-CGTTGAATCAGCATCCTTG.................
EY938146       --> ..................................................
FD569392       --> GAGATGCCTTGCAACGTTGAATCAGCATCCTTGGAACCGA..........
FD561079       --> GAGATGCCTTGCAACGTTGAATCAGCATCCTTGGAACCGAAACAAGGGAA
FD980534       --> GAGATGCCTTGCAACGTTGAATCAGCATCCTTGGAACCGAAACACGGGAA

               951    -   1001
UN14050        --> CACTTTCATTGCTGGAGGAGAAGACATGTGGGTCCATAGGTTTGATTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736489       <-- CACTTTCATTGCTGGAGGAGAAGACATGTGGGTCCATAGGTTTGATTTCC
EX908923       <-- CACTTTCATTGCTGGAGGAGAAGACATGTGGGTCCATAGGTTTGATTTCC
FD565648       <-- CACTTTCATTGCTGGAGGAGAAGACATGTGGGTCCATAGGTTTGATTTCC
FD573608       <-- CACTTTCATTGCTGGAGGAGAAGACATGTGGGTCCATAGGTTTGATTTCC
FD985200       <-- CACTTTCATTGCTGGAGGAGAAGACATGTGGGTCCATAGGTTTGATTTCC
FD950565       <-- CACTTTCATTGCTGGAGGAGAAGACATGTGGGTCCATAGGTTTGATTTCC
FD934701       <-- CACTTTCATTGCTGGAGGAGAAGACATGTGGGTCCATAGGTTTGATTTCC
FD983404       <-- ..................................................
EX907561       <-- ..................................................
FD561497       --> ..................................................
FD954279       --> ..................................................
EX887573       --> ..................................................
EX903519       --> ..................................................
EX905156       --> ..................................................
EY912902       --> ..................................................
FD987333       --> ..................................................
FD989418       --> ..................................................
FD938288       --> ..................................................
EY938146       --> ..................................................
FD569392       --> ..................................................
FD561079       --> CACTTTCATTGCTGGAGGAGAAGACATGTGGGTCCATAGGTTTGATTTCC
FD980534       --> CACTTTCATTGCTGGAGGAGAAGACATGTGGGTCCATAGGTTTGATTTCC

               1001   -   1051
UN14050        --> AGACTGGAGAAGAGATT-GGGTGTAACAAGGGTCACCACGGACCAGTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736489       <-- AGACTGGAGAAGAGATT-GGGTGTAACAAGGGTCACCACGGACCAGTGCA
EX908923       <-- AGACTGGAGAAGAGATT-GGGTGTAACAAGGGTCACCACGGACCAGTGCA
FD565648       <-- AGACTGGAGAAGAGATT-GGGTGTAACAAGGGTCACCACGGACCAGTGCA
FD573608       <-- AGACTGGAGAAGAGATT-GGGTGTAACAAGGGTCACCACGGACCAGTGCA
FD985200       <-- AGACTGGAGAAGAGATT-GGGTGTAACAAGGGTCACCACGGACCAGTGCA
FD950565       <-- AGACTGGAGAAGAGATT-GGGTGTAACAAGGGTCACCACGGACCAGTGCA
FD934701       <-- AGACTGGAGAAGAGATT-GGGTGTAACAAGGGTCACCACGGACCAGTGCA
FD983404       <-- ........GAAGAGATT-GGGTGTAACAAGGGTCACCACGGACCAGTGCA
EX907561       <-- ..................................................
FD561497       --> ..................................................
FD954279       --> ..................................................
EX887573       --> ..................................................
EX903519       --> ..................................................
EX905156       --> ..................................................
EY912902       --> ..................................................
FD987333       --> ..................................................
FD989418       --> ..................................................
FD938288       --> ..................................................
EY938146       --> ..................................................
FD569392       --> ..................................................
FD561079       --> AGACTGGAGAAGAGATT-GGGTGTAACAAGGGTCACCACGGACCAGTGCA
FD980534       --> AGACTGGAGAAGAGATTTGGGTGTAACAAGGGTCACCACGGACCAGTGCA

               1051   -   1101
UN14050        --> CTGCGTGAGGTATTCGCCAGGTGGGGAGTCATACACGTCAGGATCAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736489       <-- CTGCGTGAGGTATTCGCCAGGTGGGGAGTCATACACGTCAGGATCAGAAG
EX908923       <-- CTGCGTGAGGTATTCGCCAGGTGGGGAGTCATACACGTCAGGATCAGAAG
FD565648       <-- CTGCGTGAGGTATTCGCCAGGTGGGGAGTCATACACGTCAGGATCAGAAG
FD573608       <-- CTGCGTGAGGTATTCGCCAGGTGGGGAGTCATACACGTCAGGATCAGAAG
FD985200       <-- CTGCGTGAGGTATTCGCCAGGTGGGGAGTCATACACGTCAGGATCAGAGG
FD950565       <-- CTGCGTGAGGTATTCGCCAGGTGGGGAGTCATACACGTCAGGATCAGAAG
FD934701       <-- CTGCGTGAGGTATTCGCCAGGTGGGGAGTCATACACGTCAGGATCAGAAG
FD983404       <-- CTGCGTGAGGTATTCGCCAGGTGGGGAGTCATACACGTCAGGATCAGAAG
EX907561       <-- ..................................................
FD561497       --> ..................................................
FD954279       --> ..................................................
EX887573       --> ..................................................
EX903519       --> ..................................................
EX905156       --> ..................................................
EY912902       --> ..................................................
FD987333       --> ..................................................
FD989418       --> ..................................................
FD938288       --> ..................................................
EY938146       --> ..................................................
FD569392       --> ..................................................
FD561079       --> CTGCGTGAGGTATTCGCCAGGTGGGGAGTCATACACGTCGGGATCAGAAG
FD980534       --> CTGCGTGAGGTATTCGCCAGGTGGGGAGTCATACACGTCAGGATCAGAAG

               1101   -   1151
UN14050        --> ACGGGACGGTCAGAATATGGGAGGTTGTTGGTTCAGTGAACCAGGAGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736489       <-- ACGGGACGGTCAGAATATGGGAGGTTGTTGGTTCAGTGAACCAGGAGGAG
EX908923       <-- ACGGGACGGTCAGAATATGGGAGGTTGTTGGTTCAGTGAACCAGGAGGAG
FD565648       <-- ACGGGACGGTCAGAATATGGGAGGTTGTTGATTCAGTGAACCAGGAGGAG
FD573608       <-- ACGGGACGGTCAGAATATGGGAGGTTGTTGGTTCAGTGAACCAGGAGGAG
FD985200       <-- ACGGGACGGTCAGAATATGGGAGGTTGTTGGTTCAGTGAACCAGGAGGAG
FD950565       <-- ACGGGACGGTCAGAATATGGGAGGTTGTTGGTTCAGTGAACCAGGAGGAG
FD934701       <-- ACGGGACGGTCAGAATATGGGAGGTTGTTGGTTCAGTGAACCAGGAGGAG
FD983404       <-- ACGGGACGGTCAGAATATGGGAGGTTGTTGGTTCAGTGAACCAGGAGGAG
EX907561       <-- ..................................................
FD561497       --> ..................................................
FD954279       --> ..................................................
EX887573       --> ..................................................
EX903519       --> ..................................................
EX905156       --> ..................................................
EY912902       --> ..................................................
FD987333       --> ..................................................
FD989418       --> ..................................................
FD938288       --> ..................................................
EY938146       --> ..................................................
FD569392       --> ..................................................
FD561079       --> ACGGGACGGTCAGAATATGGGAGGTTGTTGGTTCAGTGAACCAGGAGGAG
FD980534       --> ACGGGACGGTCAGAATATGGGAGGTTGTTGGTTCAGTGAACCAGGAGGAG

               1151   -   1201
UN14050        --> AAGGAGAGCGATCAGAGCGGTAACGTGAAGCTTGTGGCAGAGGAGGTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736489       <-- AAGGAGAGCGTTCAGAGCGGTAACGTGAAGCTTGTGGCAGAGGAGGTTGT
EX908923       <-- AAGGAGAGCGATCAGAGCGGTAACGTGAAGCTTGCGGCAGAGGAGGTTGT
FD565648       <-- AAGGAGAGCGATCAGAGCGGTAACGTGAAGCTTGTGGCAGAGGAGGTTGT
FD573608       <-- AAGGAGAGCGATCAGAGCGGTAACGTGAAGCTTGTGGCAGAGGAGGTTGT
FD985200       <-- AAGGAGAGCGATCAGAGCGGTAACGTGAAGCTTGTGGCAGAGGAGGTTGT
FD950565       <-- AAGGAGAGCGATCAGAGCGGTAACGTGAAGCTTGTGGCAGAGGAGGTTGT
FD934701       <-- AAGGAGAGCGATCAGAGCGGTAACGTGAAGCTTGTGGCAGAGGAGGTTGT
FD983404       <-- AAGGAGAGCGATCAGAGCGGTAACGTGAAGCTTGTGGCAGAGGAGGTTGT
EX907561       <-- ..................................................
FD561497       --> ..................................................
FD954279       --> ..................................................
EX887573       --> ..................................................
EX903519       --> ..................................................
EX905156       --> ..................................................
EY912902       --> ..................................................
FD987333       --> ..................................................
FD989418       --> ..................................................
FD938288       --> ..................................................
EY938146       --> ..................................................
FD569392       --> ..................................................
FD561079       --> AAGGAGAGCGATCAGAGCGGTAACGTGAAGCTTGTGGC............
FD980534       --> AAGGAGAGCGATCAGAGCGGTAACGTGAAGCTTGTGGCAGAGGAGGTTGT

               1201   -   1251
UN14050        --> GCGTAAAGCTGAAAGTTTGCGTATCAGTGAGAAAGCTGCAGAAGCCAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736489       <-- GCGTAAAGCTGAAAGTCTGCGTATCGGTGAGAAAGCTGCCGAAGCCAAAT
EX908923       <-- GCGTAAAGCTGAAAGTCTGCGTATCAGTGAGAAAGCTGCAGAAGCCAAAT
FD565648       <-- GCGTAAAGCTGAAAGTCTGCGTATCAGTGAGAAAGCTGCAGAAGCCAAAT
FD573608       <-- GCGTAAAGCTGAAAGTTTGCGTATCAGTGAGAAAGCTGCAGAAGCCAAAT
FD985200       <-- GCGTAAAGCTGAAAGTTTGCGTATCAGTGAGAAAGCTGCAGAAGCCAAAT
FD950565       <-- GCGTAAAGCTGAAAGTTTGCGTATCAGTGAGAAAGCTGCAGAAGCCAAAT
FD934701       <-- GCGTAAAGCTGAAAGTTTGCGTATCAGTGAGAAAGCTGCAGAAGCCAAAT
FD983404       <-- GCGTAAAGCTGAAAGTTTGCGTATCAGTGAGAAAGCTGCAGAAGCCAAAT
EX907561       <-- ..................................................
FD561497       --> ..................................................
FD954279       --> ..................................................
EX887573       --> ..................................................
EX903519       --> ..................................................
EX905156       --> ..................................................
EY912902       --> ..................................................
FD987333       --> ..................................................
FD989418       --> ..................................................
FD938288       --> ..................................................
EY938146       --> ..................................................
FD569392       --> ..................................................
FD561079       --> ..................................................
FD980534       --> GCGTAAAGCTGAAAGTCTGCGTATCAGTGAGAAAGCTGCAGAAGCCAAAT

               1251   -   1301
UN14050        --> GAA--------TACGTATTTAGCTTTTGTGA-TATAACTAATAGTTGCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736489       <-- GA................................................
EX908923       <-- GAA--------TACGTATTTAGCTTTTGTGA-TATAACTAATAGTTGCAG
FD565648       <-- GAA--------TACGTATTTAGCTTTTGTGA-TATAACTAATAGTTGCAG
FD573608       <-- GAA--------TACGTATGTAGCTTTTGTGA-TATAACTAATAGTTGCAG
FD985200       <-- GAA--------TACGTATTTAGCTTTTGTGA-TATAACTAGTAGTTGCAG
FD950565       <-- GAA--------TACGTATTTAGCTTTTGTGA-TATAACTAATAGTTGCAG
FD934701       <-- GAA--------TACGTATTTAGCTTTTGTGA-TATAACTAATAGTTGCAG
FD983404       <-- GAA--------TACGTATTTAGCTTTTGTGA-TATAACTAATAGTTGCAG
EX907561       <-- ...............TATTTAGCTTTTGTGA-TATAATTAATAGTTGCAG
FD561497       --> ..................................................
FD954279       --> ..................................................
EX887573       --> ..................................................
EX903519       --> ..................................................
EX905156       --> ..................................................
EY912902       --> ..................................................
FD987333       --> ..................................................
FD989418       --> ..................................................
FD938288       --> ..................................................
EY938146       --> ..................................................
FD569392       --> ..................................................
FD561079       --> ..................................................
FD980534       --> GAAACATTGTTTACGTATTTAGCTTTTATGATTATAACTAATAGTTGCAG

               1301   -   1351
UN14050        --> AAGAGAATGATCCCTTCCAGTTTATCTTTTTTTTT-TT--GGCTTACAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736489       <-- ..................................................
EX908923       <-- AAGAGAATGATCCCTTCCAGTTTATCTTTTTTTTT-TTTTGGCTTACAAG
FD565648       <-- AAGAGAATGATCCCTTCCAGTTTATCTTTTTTTT---T--GGCTTACAAG
FD573608       <-- AAGAGAATGATCCCTTCCAGTTTATCTTTTTTTTT-TT-TGGCTTACAAG
FD985200       <-- AAGAGAATGATCCCTTCCAGTTT---ATTTTTTTT-TT--GGCTTACAAG
FD950565       <-- AAGAGAATGATCCCTTCCAGTTTATCTTTTTTTTT-T---GGCTTACAAG
FD934701       <-- AAGAGAATGATCCCTTCCAGTTTATCTTTTTTTTT-TT--GGCTTACAAG
FD983404       <-- AAGAGAATGATCCCTTCCAGTTT---ATTTTTTTT-TT--GGCTTACAAG
EX907561       <-- AAGAGAATGATCCCTTCCAGTTTATCTTTTTTTTT-TTTTGGCTTACAAG
FD561497       --> ..................................................
FD954279       --> ..................................................
EX887573       --> ..................................................
EX903519       --> ..................................................
EX905156       --> ..................................................
EY912902       --> ..................................................
FD987333       --> ..................................................
FD989418       --> ..................................................
FD938288       --> ..................................................
EY938146       --> ..................................................
FD569392       --> ..................................................
FD561079       --> ..................................................
FD980534       --> AAGAGAATGATCCCTTC-AGTTTATCTTTTTTTTTCTT--GGCTTACAAG

               1351   -   1401
UN14050        --> TTTGACCTGTTTTATCTTTTTTTTTTT-CCTTCCAATAAATAAATATGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736489       <-- ..................................................
EX908923       <-- TTTGACCTGTTTTATCTTTTTTTTTTT-CCTTCCAATAAATAAATATGAA
FD565648       <-- TTTGACCTGTTTTATCTTTTTTTT--T-CCTTCCAATAAATAAATATGAA
FD573608       <-- TTTGACCTGTTTTATCTTTTTTTTTccttcc...................
FD985200       <-- TTTGACCTGTTTTATCTTTTTTTTTT--CCTTCCAATAAATAAATATGAA
FD950565       <-- TTTGACCTGTTTTATCTTTTTTTTTTTTCCTTCCAATAAATAAATATGAA
FD934701       <-- TTTGACCTGTTTTATCTTTTTTTTTccttcc...................
FD983404       <-- TTTGACCTGTTTTATCTTTTTTTTTT--CCTTCCAATAAATAAATATGAA
EX907561       <-- TTTGACCTGTTTTATCTTTTTTTTTTT-CCTTCCAATAAATAAATATGAA
FD561497       --> ..................................................
FD954279       --> ..................................................
EX887573       --> ..................................................
EX903519       --> ..................................................
EX905156       --> ..................................................
EY912902       --> ..................................................
FD987333       --> ..................................................
FD989418       --> ..................................................
FD938288       --> ..................................................
EY938146       --> ..................................................
FD569392       --> ..................................................
FD561079       --> ..................................................
FD980534       --> TTTGACCTGTTTTATCT.................................

               1401   -   1451
UN14050        --> CACTTCCTCTCCCATCAATACTCATCACTTTCTCTCTACTTATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736489       <-- ............................................
EX908923       <-- CACTTCCTCTCC................................
FD565648       <-- CACTTCCTCTCCC...............................
FD573608       <-- ............................................
FD985200       <-- CACTTCCTCTCCCATCAATACTCATCACTTTCTCTCTACTTATG
FD950565       <-- CACTTCCTCTCCC...............................
FD934701       <-- ............................................
FD983404       <-- CACTTCCTCTCCC...............................
EX907561       <-- CACTTCCTCTCC................................
FD561497       --> ............................................
FD954279       --> ............................................
EX887573       --> ............................................
EX903519       --> ............................................
EX905156       --> ............................................
EY912902       --> ............................................
FD987333       --> ............................................
FD989418       --> ............................................
FD938288       --> ............................................
EY938146       --> ............................................
FD569392       --> ............................................
FD561079       --> ............................................
FD980534       --> ............................................