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Alignment for radish unigene UN14054

               1      -     51
UN14054        --> GGAAACGAGAAGACGAGAAATATCTGTTTAGAAACAGAAACAGAACAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529057       <-- ..................gATATCTGTTTAGAAACAGAAACAGAACAGAA
FD530702       <-- .................................................a
HS106947       <-- ..................................................
EX752551       <-- ..................................................
FD573366       <-- ..................................................
FD951698       <-- ..................................................
EW719889       <-- ..................................................
FD544470       <-- ..................................................
EY912811       <-- ..................................................
EX748684       --> GGAAACGAGAAGACGAGAAATATCTGTTTAGAAACAGAAACAGAA-AGAA
FD532647       --> ..................gATATCTGTTTAGAAACAGAAACAGAACAGAA
EW716017       --> ...................ggATCTCTTTAGAACCAGAAACAGAACAGAA
FD955657       --> ...........................ggAGAAACAGAA-CAGAACAGAA
EY917266       --> .................ggagaaacagaacagAACAG-AACAGAACAGAA
FD534897       --> ................................................ga
FD569104       --> ..................................................
EV535117       --> ..................................................
FD548264       --> ..................................................
FD558814       --> ..................................................
EY916212       --> ..................................................

               51     -    101
UN14054        --> CAGAGAGACACACAAAAATGTATTTTGCAGCCATAGCTTCTTCACGACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529057       <-- CAGAGAGACACACAAAAATGTATTTCGCAGCCATAGCTTCTTCACGACAT
FD530702       <-- gAGAGAGACACACAAAAATGTATTTTGCAGCCATAGCTTCTTCACGACAT
HS106947       <-- .ttttgatcgagCAAAAATGTATTTCGCAGCCATAGCTTCTTCACGACAT
EX752551       <-- ....................ttTTTCGCAGCCATAGCTTCTTCACGACAT
FD573366       <-- ..................................................
FD951698       <-- ..................................................
EW719889       <-- ..................................................
FD544470       <-- ..................................................
EY912811       <-- ..................................................
EX748684       --> CAGAGAGACACACAAAAATGTTTTTCGCAGCCATAGCTTCTTCACGACAT
FD532647       --> CAGAGAGACACACAAAAATGTATTTCGCAGCCATAGCTTCTTCACGACAT
EW716017       --> CAGAGAGACACACAAAAATGTATTTCGCAGCCATAGCTTCTTCACGACAT
FD955657       --> CAGAGAGACACACAAAAATGTATTTTGCAGCCATAGCTTCTTCACGACAT
EY917266       --> CAGAGAGACACACAAAAATGTATTTTGCAGCCATAGCTTCTTCACGACAT
FD534897       --> gAGAGAGACACACAAAAATGTATTTTGCAGCCATAGCTTCTTCACGACAT
FD569104       --> ....ggGACACACAAAAATGTATTTTGCAGCCATAGCTTCTTCACGACAT
EV535117       --> .......ggACACAAAAATGTATTTTGCAGCCATAGCTTCTTCACGACAT
FD548264       --> ..................................................
FD558814       --> ..................................................
EY916212       --> ..................................................

               101    -    151
UN14054        --> AGCTTTTTGTCAGACTCTTTCAGTTCCCGACACAGCTTCAAACCCAGACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529057       <-- AGCTTTTTGTCAGACTCTTTCAGTTCCCGACACAGCTTCAAACCCAGACA
FD530702       <-- AGCTTTTTGTCAGACTCTTTCAGTTCCCGACACAGCTTCAAACCCAGACA
HS106947       <-- AGCTTTTTGTCAGACTCTTTCAGTTACCGACACAGCTTCAAAGCCATACA
EX752551       <-- AGCTTTTTGTCAGACTCTTTCAGTTCCCGACACAGCTTCAAACCCAGACA
FD573366       <-- ...TTTTTGTCAGACTCTTTCAGTTCCCGACACAGCTTCAAACCCAGACA
FD951698       <-- ...TTTTTGTCAGACTCTTTCAGTTCCCGACACAGCTTCAAACCCAGACA
EW719889       <-- ..................................................
FD544470       <-- ..................................................
EY912811       <-- ..................................................
EX748684       --> AGCTTTTTGTCAGACTCTTTCAGTTCCCGACACAGCTTCAAACCCAGACA
FD532647       --> AGCTTTTTGTCAGACTCTTTCAGTTCCCGACACAGCTTCAAACCCAGACA
EW716017       --> AGCTTTTTGTCAGACTCTTTCAGTTCCCGACACAGCTTCAAACCCAGACA
FD955657       --> AGCTTTTTGTCAGACTCTTTCAGTTCCCGACACAGCTTCAAACCCAGACA
EY917266       --> AGCTTTTTGTCAGACTCTTTCAGTTCCCGACACAGCTTCAAACCCAGACA
FD534897       --> AGCTTTTTGTCAGACTCTTTCAGTTCCCGACACAGCTTCAAACCCAGACA
FD569104       --> AGCTTTTTGTCAGACTCTTTCAGTTCCCGACACAGCTTCAAACCCAGACA
EV535117       --> AGCTTTTTGTCAGACTCTTTCAGTTCCCGACACAGCTTCAAACCCAGACA
FD548264       --> ..................................................
FD558814       --> ..................................................
EY916212       --> ..................................................

               151    -    201
UN14054        --> CAGTAATAAGCTCACACGTCCCAATTCAATCTGTTGCAAGTCTCCACACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529057       <-- CAGTAATAAGCTCACACGTCCCAATTCAATCTGTTGCAAATCTCCACACC
FD530702       <-- CAGTAATAAGCTCACACGTCCCAATTCAATCTGTTGCAAGTCTCCACACC
HS106947       <-- CAGTAATAAGCTCACACGTCCCAATTCAATATGTTGCAAATCTCCACACC
EX752551       <-- CAGTAATAAGCTCACACGTCCCAATTCAATCTGTTGCAAATCTCCACACC
FD573366       <-- CAGTAATAAGCTCACACGTCCCAATTCAATCTGTTGCAAGTCTCCACACC
FD951698       <-- CAGTAATAAGCTCACACGTCCCAATTCAATCTGTTGCAAGTCTCCACACC
EW719889       <-- ..................................................
FD544470       <-- ..................................................
EY912811       <-- ..................................................
EX748684       --> CAGTAATAAGCTCACACGTCCCAATTCAATCTGTTGCAAATCTCCACACC
FD532647       --> CAGTAATAAGCTCACACGTCCCAATTCAATCTGTTGCAAATCTCCACACC
EW716017       --> CAGTAATAAGCACACACGTCCGAATTCAATATGTTGCAAATCTCCACACC
FD955657       --> CAGTAATAAGCTCACACGTCCCAATTCAATCTGTTGCAAGTCTCCACACC
EY917266       --> CAGTAATAAGCTCACACGTCCCAATTCAATCTGTTGCAAGTCTCCACACC
FD534897       --> CAGTAATAAGCTCACACGTCCCAATTCAATCTGTTGCAAGTCTCCACACC
FD569104       --> CAGTAATAAGCTCACACGTCCCAATTCAATCTGTTGCAAGTCTCCACACC
EV535117       --> CAGTAATAAGCTCACACGTCCCAATTCAATCTGTTGCAAGTCTCCACACC
FD548264       --> ..................................................
FD558814       --> ..................................................
EY916212       --> ..................................................

               201    -    251
UN14054        --> ACGACGACGAAACTGATTCTTCTCGGAAACATGAGAATCATCTGGCTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529057       <-- ACGACGACGAAACTGATTCTTCTCGGAAAAATGAGAATCAGCTGGCGAAA
FD530702       <-- ACGACGACGAAACTGATTCTTCCAGGAAACATGAGAATCATCTGGCTAAA
HS106947       <-- ACGACGACGAAACTGATTCTTCTCGGAAACATGAGAATCAGCTAGCTAAG
EX752551       <-- ACGACGACGAAACTGATTCTTCTCGGAAAAATGAGAATCAGCTGGCGAAA
FD573366       <-- ACGACGACGAAACTGATTCTTCCCGGAAACATGAGAATCATCTGGCTAAA
FD951698       <-- ACGACGACGAAACAGATTCTTCCCGGAAACATGAGAATCATCTGGCTAAA
EW719889       <-- ..................................................
FD544470       <-- ..................................................
EY912811       <-- ..................................................
EX748684       --> ACGACGACGAAACTGATTCTTCTCGGAAAAATGAGAATCAGCTGGCGAAA
FD532647       --> ACGACGACGAAACTGATTCTTCTCGGAAAAATGAGAATCAGCTGGCGAAA
EW716017       --> ACGACGACGAAACTGATTCTTCTCGGAAAAATGAGAATCAGCTGGCGAAA
FD955657       --> ACGACGACGAAACAGATTCTTCCCGGAAACATGAGAATCATCTGGCTAAA
EY917266       --> ACGACGACGAAACTGATTCTTCCCGGAAACATGAGAATCATCTGGCTAAA
FD534897       --> ACGACGACGAAACTGATTCTTCCAGGAAACATGAGAATCATCTGGCTAAA
FD569104       --> ACGACGACGAAACTGATTCTTCCCGGAAACATGAGAATCATCTGGCTAAA
EV535117       --> ACGACGACGAAACTGATTCTTCCCGGAAACATGAGAATCATCTGGCTAAA
FD548264       --> ..................................................
FD558814       --> ..................................................
EY916212       --> ..................................................

               251    -    301
UN14054        --> TTGGCAATAGCGACGTTAGCGGTTGGCGTTTTGGCTTTGGGATCCGTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529057       <-- ATAGCAATCGCGACGTTAGCGGTTGGCGTTTTGGCTTTGGGATCCGTTGG  Raphanus raphanistrum subsp. maritimus
FD530702       <-- TTGGCAATAGCGACGTTAGCGGTTGGCGTTTTGGCTTTGGGATCCGTTGG  Raphanus raphanistrum subsp. maritimus
HS106947       <-- TTGGCAATAGCGACGTTAGCGGTTGGCGTTTTGGCTTTGGGGTCCGTTGG  Raphanus sativus var. niger
EX752551       <-- ATAGCA--AGCGACGTTAGCGGTTGGCGTTTTGGCTTTGGGATCCGTTGG  Raphanus raphanistrum subsp. maritimus
FD573366       <-- TTGGCAATAGCAACGTTATCGGTTGGCGTTTTGGCTTTGGGATCCGTTGG  Raphanus sativus cv Early Scarlet Globe
FD951698       <-- TTGGCAATAGCAACGTTAGCGGTTGGCGTTTTGGCTTTGGGATCCGTTGG  Raphanus sativus cv Rat-Tail Radish #3870
EW719889       <-- ..................................................  Raphanus sativus var. oleiformis
FD544470       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912811       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748684       --> ATAGCAA--GCGACGTTAGCGGTTGGCGTTTTGGCTTTGGGAACCGTTGG  Raphanus raphanistrum subsp. maritimus
FD532647       --> ATAGCAATCGCGACGTTAGCGGTTGGCGTTTTGGCTTTGGGATCCGTTGG  Raphanus raphanistrum subsp. maritimus
EW716017       --> TTAGCAATTGCGACGTTAGCGGTTGGCGTTTTGGCTTTGGGATCCGTTGG  Raphanus sativus var. oleiformis
FD955657       --> TTGGCAATAGCAACGTTAGCGGTTGGCGTTTTGGCTTTGGGATCCGTTGG  Raphanus sativus cv Rat-Tail Radish #3870
EY917266       --> TTGGCAATAGCAACGTTAGCGGTTGGCGTTTTGGCTTTGGGATCCGTTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD534897       --> TTGGCAATAGCGACGTTAGCGGTTGGCGTTTTGGCTTTGGGATCCGTTGG  Raphanus raphanistrum subsp. maritimus
FD569104       --> TTGGCAATAGCAACGTTATCGGTTGGCGTTTTGGCTTTGGGATCCGTTGG  Raphanus sativus cv Early Scarlet Globe
EV535117       --> TTGGCAATAGCGACGTTAGCGGTTGGCGTTTTGGCTTTGGGATCCGTTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD548264       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD558814       --> ..................................................  Raphanus raphanistrum subsp. landra
EY916212       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               301    -    351
UN14054        --> AGATGCGTCTGCGGCTAAGAGCGGCGGAAGAATCGGTGGTCAAGCGTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529057       <-- AGATGCGTCTGCGGCTAAGAGCGGCGGGAGAATAGGCGGTCAAGCGTTTC  Raphanus raphanistrum subsp. maritimus
FD530702       <-- AGATGCGTCTGCGGCTAAGAGCGGCGGAAGAATCGGTGGTCAAGCGTTTC  Raphanus raphanistrum subsp. maritimus
HS106947       <-- AGATGCGTCTGCGGCTAAGAGCGGCGGGAGAATAGGCGGTCAAGCGTTTC  Raphanus sativus var. niger
EX752551       <-- AGATGCGTCTGCGGCTAAGAGCGGCGGGAGAATAGGCGGTCAAGCGTTTC  Raphanus raphanistrum subsp. maritimus
FD573366       <-- AGATGCGTCTGCGGCTAAGAGCGGCGGAAGAATCGGTGGTCAAGCGTTTC  Raphanus sativus cv Early Scarlet Globe
FD951698       <-- AGATGCGTTTGCGGCTAAGAGCGGCGGAAGAATCGGTGGTCAAGCGTTTC  Raphanus sativus cv Rat-Tail Radish #3870
EW719889       <-- ....GCGTTTGCGGCTAAGAGCGGCGGAAGAATTGGTGGTCAAGCGTTTC  Raphanus sativus var. oleiformis
FD544470       <-- .................gGAGCGGCGGAAGAATCGGTGGTCAAGCGTTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912811       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748684       --> AGATGCGTCTGCGGCTAAGAGCGGCGGGAGAATAGGCGGTCAAGCGTTTC  Raphanus raphanistrum subsp. maritimus
FD532647       --> AGATGCGTCTGCGGCTAAGAGCGGCGGGAGAATAGGCGGTCAAGCGTTTC  Raphanus raphanistrum subsp. maritimus
EW716017       --> AGATGCGTCTGCGGCTAAGAGCGGCGGAAGAATTGGTGGTCAAGCGTTTC  Raphanus sativus var. oleiformis
FD955657       --> AGATGCGTCTGCGGCTAAGAGCGGCGGAAGAATCGGTGGTCAAGCGTTTC  Raphanus sativus cv Rat-Tail Radish #3870
EY917266       --> AGATGCGTCTGCGGCTAAGAGCGGCGGAAGAATCGGTGGTCAAGCGTTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD534897       --> AGATGCGTCTGCGGCTAAGAGCGGCGGAAGAATCGGTGGTCAAGCGTTTC  Raphanus raphanistrum subsp. maritimus
FD569104       --> AGATGCGTCTGCGGCTAAGAGCGGCGGAAGAATCGGTGGTCAAGCGTTTC  Raphanus sativus cv Early Scarlet Globe
EV535117       --> AGATGCGTCTGCGGCTAAGAGCGGCGGAAGAATCGGTGGTCAAGCGTTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD548264       --> .................gGAGCGGCGGAAGAATCGGTGGTCAAGCGTTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD558814       --> ..................................................  Raphanus raphanistrum subsp. landra
EY916212       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               351    -    401
UN14054        --> GGTCTTCAGCTCCTCGGCCTCCTCCTAGAATTAACAACCGATCGAGGACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529057       <-- GGTCTTCAGCTCCTCGGCCTCCTCCTAGAATTAACAACCGATCAAGGACC
FD530702       <-- GGTCTTCAGCTCCTCGGCCTCCTCCTAGAATTAACAACCGATCGAGGACC
HS106947       <-- GGTCTTCAGCTCCTCGGCCTCCTCCTAGAATTAACAACCGATCGAGGACC
EX752551       <-- GGTCTTCAGCTCCTCGGCCTCCTCCTAGAATTAACAACCGATCAAGGACC
FD573366       <-- GATCTTCAGCTCCTCGGCCTCCTCCTAGAATTAACAACCGATCGAGGACC
FD951698       <-- GGTTTTCAGCTCCTCGGCCTCCTCCTAGAATTAACAACCGATCGAGGACC
EW719889       <-- GGTCTTCAGCTCCTCGGCCTCCTCCTAGAATTAACAACCGATCGAGGACC
FD544470       <-- GGTCTTCAGCTCCTCGGCCTCCTCCTAGAATTAACAACCGATCGAGGACC
EY912811       <-- ..................................................
EX748684       --> GGTCTTCAGCTCCTCGGCCTCCTCCTAGAATTAACAACCGATCAAGGACC
FD532647       --> GGTCTTCAGCTCCTCGGCCTCCTCCTAGAATTAACAACCGATCAAGGACC
EW716017       --> GGTCTTCAGCTCCTCGGCCTCCTCCTAGAATTAACAACCGATCGAGGACC
FD955657       --> GGTCTTCAGCTCCTCGGCCTCCTCCTAGAATTAACAACCGATCGAGGACC
EY917266       --> GGTCTTCAGCTCCTCGGCCTCCTCCTAGAATTAACAACCGATCGAGGACC
FD534897       --> GGTCTTCAGCTCCTCGGCCTCCTCCTAGAATTAACAACCGATCGAGGACC
FD569104       --> GATCTTCAGCTCCTCGGCCTCCTCCTAGAATTAACAACCGATCGAGGACC
EV535117       --> GGTCTTCTGCTCCTCGGCCTCCTCCTAGAATTAACAACCGATCGAGGACC
FD548264       --> GGTCTTCAGCTCCTCGGCCTCCTCCTAGAATTAACAACCGATCGAGGACC
FD558814       --> ..................................................
EY916212       --> ..................................................

               401    -    451
UN14054        --> AACATCTACGTGAATCCTCAGGTTGCACCACCTTTGATCGGTGGCTATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529057       <-- AACATCTACGTGAATCCTCAGGTTGCACCACCTTTGATCGGTGGCTATGG
FD530702       <-- AACATCTACGTGAATCCTCAGGTTGCACCACCTTTGATCGGTGGCTATGG
HS106947       <-- AACATCTACGTGAATCCTCAGGTTGCACCACCTTTGATCGGTGGCTATGG
EX752551       <-- AACATCTACGTGAATCCTCAGGTTGCACCACCTTTGATCGGTGGCTATGG
FD573366       <-- AACATCTACGTGAATCCTCAGGTTGCACCACCTTTGATCGGTGGCTATGG
FD951698       <-- AACATTTACGTGAATCCTCAGGTTGCACCACCTTTGATCGGTGGCTATGG
EW719889       <-- AACGTTTACGTGAATCCTCAGGTTGCACCACCTTTGATCGGTGGCTATGG
FD544470       <-- AACATCTACGTGAATCCTCAGGTTGCACCACCTTTGATCGGTGGCTATGG
EY912811       <-- ............................CACCTTTGATCGGTGGCTATGG
EX748684       --> AACATCTACGTGAATCCTCAGGTTGCACCACCTTTGATCGGTGGCTATGG
FD532647       --> AACATCTACGTGAATCCTCACGTTGCACCACCTTTGATCGGTGGCTATGG
EW716017       --> AACGTCTACGTGAATCCTCAGGTTGCACCACCTTTGATCGGTGGCTATGG
FD955657       --> AACATCTACGTGAATCCTCAGGTTGCACCACCTTTGATCGGTGGCTATGG
EY917266       --> AACATCTACGTGAATCCTCAGGTTGCACCACCTTTGATCGGTGGCTATGG
FD534897       --> AACATCTACGTGAATCCTCAGGTTGCACCACCTTTGATCGGTGGCTATGG
FD569104       --> AACATCTACGTGAATCCTCAGGTTGCACCACCTTTGATCGGTGGCTATGG
EV535117       --> AATATCTACGTGAATCCTCAGGTTGCACCACCTTTGATCGGTGGCTATGG
FD548264       --> AACATCTACGTGAATCCTCAGGTTGCACCACCTTTGATCGGTGGCTATGG
FD558814       --> ..................................................
EY916212       --> ..................................................

               451    -    501
UN14054        --> ATATGGCTACGGCGGTTGGGGATGGTCACCGTTTTCTTACTTTGCCCCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529057       <-- ATATGGCTACGGCGGTTGGGGATGGTCACCGTTTTCTTACTTTGCCCCCG  Raphanus raphanistrum subsp. maritimus
FD530702       <-- ATATGGCTACGGCGGTTGGGGATGGTCACCGTTTTCTTACTTTGCCCCTG  Raphanus raphanistrum subsp. maritimus
HS106947       <-- ATATGGCTACGGCGGTTGGGGATGGTCACCGTTTTCTTACTTTGCCCCCG  Raphanus sativus var. niger
EX752551       <-- ATATGGCTACGGCGGTTGGGGATGGTCACCGTTTTCTTACTTTGCCCCCG  Raphanus raphanistrum subsp. maritimus
FD573366       <-- ATATGGCTACGGCGGTTGGGGATGGTCACCATTTTCTTACTTTGCCCCCG  Raphanus sativus cv Early Scarlet Globe
FD951698       <-- ATATGGCTACGGCGGTTGGGGATGGTCACCGTTTTCTTACTTTGCCCCCG  Raphanus sativus cv Rat-Tail Radish #3870
EW719889       <-- ATATGGCTACGGCGGTTGGGGATGGTCACCGTTTTCTTACTTTGCCCCCG  Raphanus sativus var. oleiformis
FD544470       <-- ATATGGCTACGGCGGTTGGGGATGGTCACCATTTTCTTACTTTGCCCCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912811       <-- ATATGGCTACGGCGGTTGGGGATGGTCACCATTTTCTTACTTTGCCCCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748684       --> ATATGGCTACGGCGGTTGGGGATGGTCACCGTTTTCTTACTTTGCCCCCG  Raphanus raphanistrum subsp. maritimus
FD532647       --> ATATGGCTACCGCGGTTGGGGATGGTCACCGTTTTCTTACTTTGCCCCCG  Raphanus raphanistrum subsp. maritimus
EW716017       --> ATATGGCTACGGCGGTTGGGGATGGTCACCGTTTTCTTACTTTGCCCCCG  Raphanus sativus var. oleiformis
FD955657       --> ATATGGCTACGGCGGTTGGGGATGGTCACCGTTTTCTTACTTTGCCCCCG  Raphanus sativus cv Rat-Tail Radish #3870
EY917266       --> ATATGGCTACGGCGGTTGGGGATGGTCACCATTTTCTTACTTTGCCCCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD534897       --> ATATGGCTACGGCGGTTGGGGATGGTCACCGTTTTCTTACTTTGCCCCTG  Raphanus raphanistrum subsp. maritimus
FD569104       --> ATATGGCTACGGCGGTTGGGGATGGTCACCATTTTCTTACTTTGCCCCCG  Raphanus sativus cv Early Scarlet Globe
EV535117       --> ATATGGCTACGGCGGTTGGGGATGGTCACCGTTTTCTTACTTTGCCCCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD548264       --> ATATGGCTACGGCGGTTGGGGATGGTCACCATTTTCTTACTTTGCCCCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD558814       --> ..................................................  Raphanus raphanistrum subsp. landra
EY916212       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               501    -    551
UN14054        --> GTCCTGCGGTAGCAGTTGGTGGCGGCGGTGGCTTCGACCTCCTCGTTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529057       <-- GTCCTGCGGTAGCAGTTGGTGGCGGCGGTGGCTTCGACCTCCTCGTTCTC
FD530702       <-- GTCCTGCGGTAGCAGTTGGTGGCGGCGGTGGCTTCGACCTCCTCGTTCTC
HS106947       <-- GTCCTGCGGTAGCAGTTGGTGGCGGCGGTGGCTTCGACCTCCTCGTTCTC
EX752551       <-- GTCCTGCGGTAGCAGTTGGTGGCGGCGGTGGCTTCGACCTCCTCGTTCTC
FD573366       <-- GTCCTGCGGTAGCAGTTGGTGGCGGCGGTGGCTTCGACCTCCTCGTTCTC
FD951698       <-- GTCCTGCGGTAGCAGTTGGTGGCGGCGGTGGCTTCGACCTCCTCGTTCTC
EW719889       <-- GTCCTGCGGTGGCAGTTGGTGGCGGCGGTGGCTTCGACCTCCTCGTTCTC
FD544470       <-- GTCCTGCGGTAGCAGTTGGTGGCGGCGGTGGCTTCGACCTCCTCGTTCTC
EY912811       <-- GTCCTGCGGTAGCAGTTGGTGGCGGCGGTGGCTTCGACCTCCTCGT-CTC
EX748684       --> GTCCTGCGGTAGCAGTTGGTGGCGGCGGTGGCTTCGACCTCCTCGTTCTC
FD532647       --> GTCCTGC...........................................
EW716017       --> GTCCTGCGGTGGCAGTTGGTGGCGGCGGTGGCTTCGACCTCCTCGTTCTC
FD955657       --> GTCCTGCGGTAGCAGTTGGTGGCGGCGGTGGCTTCGACCTCCTCGTTCTC
EY917266       --> GTCCTGCGGTAGCAGTTGGTGGCGGCGGTGGCTTCGACCTCCTCGT-CTC
FD534897       --> GTCCTGCGGTAGCAGTTGGTGGCGGCGGTGGCTTCGACCTCCTCGTTCTC
FD569104       --> GTCCTGCGGTAGCAGTTGGTGGCGGCGGTGGCTTCGACCTCCTCGTTCTC
EV535117       --> GTCCTGCGGTAGCAGTTGGTGGCGGCGGTGGCTTCGACCTCCTCGTTCTC
FD548264       --> GTCCTGCGGTAGCAGTTGGTGGCGGCGGTGGCTTCGACCTCCTCGTTCTC
FD558814       --> ..................................................
EY916212       --> ..................................................

               551    -    601
UN14054        --> TTCATGTTTTTT-GGAGCCGCTTCAGCCGTGGCCAGAAACATTTTCCGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529057       <-- TTCATGTTTTTT-GGATCCGCTTCAGCCGTGGCCAGAAACATTTTCCGGT  Raphanus raphanistrum subsp. maritimus
FD530702       <-- TTCATGTTTTTT-GGAGCCGCTTCAGCCGTGGCAAGAAACGTTTTCCGGT  Raphanus raphanistrum subsp. maritimus
HS106947       <-- TTCATGTTTTTT-GGAGCCGCTTCAGCCGTGGCCAGAAACGTTTTCCGAT  Raphanus sativus var. niger
EX752551       <-- TTCATGTTTTTT-GGAGCCGCTTCAGCCGTGGCCAGAAACATTTTCCGGT  Raphanus raphanistrum subsp. maritimus
FD573366       <-- TTCATGTTTTTTTGGAGCCGCTTCAGCCGTGGCCAGAAACATTTTCCGGT  Raphanus sativus cv Early Scarlet Globe
FD951698       <-- TTCATGTTTTTT-GGAGCCGCTTCAGCCGTGGCCAGAAACATTTTCCGGT  Raphanus sativus cv Rat-Tail Radish #3870
EW719889       <-- TTCATGTTTTTT-GGAGCCGCTTCAGCCGTGGCCAGAAACGTTTTCCGAT  Raphanus sativus var. oleiformis
FD544470       <-- TTCATGTTTTTT-GGAGCCGCTTCAGCCGTGGCCAGAAACATTTTCCGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912811       <-- TTCATGTTTTTT-GGAGCCGCTTCAGCCGTGGCCAGAAACATTTTCCGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748684       --> TTCATGTTTTTT-GGAGCCGCTTCAGCCGTGGCCAGAAACATTTTCCGGT  Raphanus raphanistrum subsp. maritimus
FD532647       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW716017       --> TTCATGTTTTTT-GGAGCCGCTTCAGCCGTGGCCAGAAACGTTTTCCGAT  Raphanus sativus var. oleiformis
FD955657       --> TTCATGTTTTTT-GGAGCCGCTTCAGCCGTGGCCAGAAACATTTTCCGGT  Raphanus sativus cv Rat-Tail Radish #3870
EY917266       --> TTCATGTTTTTT-GGAGCCGCTTCAGCCGTGGCCAGAAACATTTTCCGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD534897       --> TTCATGTTTTTT-GGAGCCGCTTCAGCCGTGGCAAGAAACGTTTTCCGGT  Raphanus raphanistrum subsp. maritimus
FD569104       --> TTCATGTTTTTTTGGAGCCGCTTCAGCCGTGGCCAGAAACATTTTCCGGT  Raphanus sativus cv Early Scarlet Globe
EV535117       --> TTCATGTTTTTT-GGAGCCGCTTCAGCCGTGGCCAGAAACGTTTTCCGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD548264       --> TTCATGTTTTTT-GGAGCCGCTTCAGCCGTGGCCAGAAACATTTTCCGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD558814       --> ..................................gGAAACGTTTTCCGAT  Raphanus raphanistrum subsp. landra
EY916212       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               601    -    651
UN14054        --> CAAGAAATGAAGAAGATGACGAAGATGACTATTAGGGCTGGGAAAGAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529057       <-- CAAGAAATGAAGAAGATGACGAAGATGACTATTAGGGCTGGGAAAGAATA
FD530702       <-- CAAGAAATGAAGAAGATGACGAAGATGACTATTAGGGCTGGGAAAGAATA
HS106947       <-- CAAGAAATGAAGAAGATGACGAAGATGACTATTAGGGCTGGGAAAGAATA
EX752551       <-- CAAGAAATGAAGAAGATGACGAAGATGACTATTAGGGCTGGGAAAGAATA
FD573366       <-- CAAGAAATGAAGAAGATGACGAAGATGACTATTAGGGCTGGGAAAGAATA
FD951698       <-- CAAGAAATGAAGAAGATGACGAAGATGACTATTAGGGCTGGGAAAGAATA
EW719889       <-- CAAGAAATGAAGAAGATGACGAAGATGACTATTAGGGCTGGGAAAGAATA
FD544470       <-- CAAGAGATGAAGAAGATGACGAAGATGACTATTAGGGCTGGGAAAGAATA
EY912811       <-- CAAGAAATGAAGAAGATGACGAAGATGACTATTAGGGCTGGGAAAGAATA
EX748684       --> CAAGAAATGAAGAAGATGACGAAGATGACTATTAGG-CTGGGAAAGAATA
FD532647       --> ..................................................
EW716017       --> CAAGAAATGAAGAAGATGACGAAGATGACTATTAGGGCTGGGAA-GAATA
FD955657       --> CAAGAAATGAAGAAGATGACGAAGATGACTATTAGGGCTGGGAAAGAATA
EY917266       --> CAAGAAATGAAGAAGATGACGAAGATGACTATTAGGGCTGGGAAAGAATA
FD534897       --> CAAGAAATGAAGAAGATGACGAAGATGACTATTAGGGCTGGGAAAGAATA
FD569104       --> CAAGAAATGAAGAAGATGACGAAGATGACTATTAGGGCTGGGAAAGAATA
EV535117       --> CAAGAAACGAAGAAGATGACGAAGATGACTATTAGGGCTGGGAAAGAATA
FD548264       --> CAAGAGATGAAGAAGATGACGAAGATGACTATTAGGGCTGGGAAAGAATA
FD558814       --> CAAGAAATGAAGAAGATGACGAAGATGACTATTAGGGCTGGGAAAGAATA
EY916212       --> ..................................................

               651    -    701
UN14054        --> AAATCAGAGAGGCATGTCTTATTACAAACATAGTCGAATATACGATTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529057       <-- AAATCAGAGAGGCATGTCTTATTACAAACATGGTCGAATATACGATTTTG
FD530702       <-- AAATCAGAGAGGCATGTCTTATTACAAACATAGTCGAATATACGATTTTG
HS106947       <-- AAATCAGAGAGGCATGTCTTATTACAAACATAGTCGAATATACGATTTTG
EX752551       <-- AAATCAGAGAGGCATGTCTTATTACAAACATAGTCGAATATACGATTTTG
FD573366       <-- AAATCAGAGAGGCATGTCTTATTACAAACATAGTCGAATATACGATTTTG
FD951698       <-- AAATCAGAGAGGCATGTCTTATTACAAACATAGTCGAATATACGATTTTG
EW719889       <-- AAATCAGAGAGGCATGTCTTATTACAAACATAGTCGAATATACGATTTTG
FD544470       <-- AAATCAGAGAGGCATGTCTTATTACAAACATAGTCGAATATACGATTTTG
EY912811       <-- AAATCAGAGAGGCATGTCTTATTACAAACATAGTCGAATATACGATTTTG
EX748684       --> AAATCAGAGAG-CATGTCTTATTACAA-CATAGTCGA-TATACGATTTTG
FD532647       --> ..................................................
EW716017       --> AAATCAGAGAGGCATGTCTTATTACAAACATAGTCGAATATACGATTTTG
FD955657       --> AAATCAGAGAGGCATGTCTTATTACAAACATAGTCGAATATACGATTTTG
EY917266       --> AAATCAGAGAGGCATGTCTTATTACAAACATAGTCGAATATACGATTT-G
FD534897       --> AAATCAGAGAGGCATGTCTTATTACAAACATAGTCGAATATACGATTTTG
FD569104       --> AAATCAGAGAGGCATGTCTTATTACAAACATAGTCGAATATACGATTTTG
EV535117       --> AAATCAGAGAGGCATGTCTTATTACAAACATAGTCGAATATACGATTTTG
FD548264       --> AAATCAGAGAGGCATGTCTTATT...........................
FD558814       --> AAATCAGAGAGGCATGTCTTATTACAAACATAGTCGAATATACGATTTTG
EY916212       --> ........GAGGCATGTCTTATTACAAACATAGTCGAATATACGATTTTG

               701    -    751
UN14054        --> TGTTAAAAGTTAATGATGGAAAAGACGGTTTGTAATTTGTAAACCTTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529057       <-- TGTTAAAAGTTAATGATGG...............................
FD530702       <-- TGTTAAAAGTTAATGATGGAAAAGACGGTTTGTAATTTGTAAACCTTGAG
HS106947       <-- TGTTAAAAGTTAATGATGGAAAAGACGGTTTGTAATTTGTAAACCTTGAG
EX752551       <-- TGTTAAAAGTTAATGATGGAAAAGACGGTTTGTAATTTGTAAACCTTGAG
FD573366       <-- TGTTAAAAGTTAATGATGGAAAAGACGGTTTGTAATTTGTAAACCTTGAG
FD951698       <-- TGTTAAAAGTTAATGATGGAAAAGACGGTTTGTAATTTGTAAACCTTGAG
EW719889       <-- TGTTAAAAGTTAATGATGGA..............................
FD544470       <-- TGTTAAAAGTTAATGATGGAAAAGACGGTTTGTAATTTGTAAACCTTGAG
EY912811       <-- TGTTAAAAGTTAATGATGGAAAGGACGGTTTGTAATTTGTAAACCTTGAG
EX748684       --> T.................................................
FD532647       --> ..................................................
EW716017       --> TGTTAAAAGTTAATGATGGAAAAGACGGTTTGTAATTTGTAAACCTTGAG
FD955657       --> TGTTAAAAGTTAATGATGGAAAAGACGGTTTGTAATTTGTAAACCTTGAG
EY917266       --> TGTTAAA-G-TAATGATGGAAAGGACG-TTTGTA-TTTGTAA-CCTTGAG
FD534897       --> TGTTAAAAGTTAATGATGGAAAAGACGGTTTGTAATTTGTAA-CCTTGAG
FD569104       --> TGTTAAAAGTTAATGATGGAAAAGACGGTTTGTAATTTGTAAACCTTGAG
EV535117       --> TGTTAAAAGTTAATGATGGAAAAGACGGTTTGTAgtgtt...........
FD548264       --> ..................................................
FD558814       --> TGTTAAAAGTTAATGATGGAAAAGACGGTTTGTAATTTGTAAACCTTGAG
EY916212       --> TGTTAAAAGTTAATGATGGAAAAGACGGTTTGTAATTTGTAAACCTTGAG

               751    -    801
UN14054        --> ACAATTTACTAAAGAAAAATCTGAAAAACTTATATAGCTAAACTCAAATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529057       <-- ..................................................
FD530702       <-- ACAATTTACTAAAGAAAAATCTGAAAAACTTATATAGCc...........
HS106947       <-- ACAAGTTACTAA-GAACAATCTGAAAAACTTATATAGCTAAACTCAAATT
EX752551       <-- ACAATTTACTAAAGAAAAATCTGAAAAACTTATATAGC............
FD573366       <-- ACAATTTACTAAAGAAAAATCTGAAAAACTTATATAGCg...........
FD951698       <-- ACAATTTACT........................................
EW719889       <-- ..................................................
FD544470       <-- ACAATTTACTAAAGAAAAATCTGAAAAACTTAT.................
EY912811       <-- ACAATTTACTAAAGAAAAATCTGAAAAACTTATATAGCTAAACTCAAATT
EX748684       --> ..................................................
FD532647       --> ..................................................
EW716017       --> ACAAGTTACTAAGGAACAATCTGAAAAACTTATATAGCTAAACTCg....
FD955657       --> ACAATTTAC.........................................
EY917266       --> ACA-TTTACTAAAGAAAA-TCTGAAAA-C-TATATAGCTAA-CTCAAtt.
FD534897       --> ACAt..............................................
FD569104       --> ACAAT.............................................
EV535117       --> ..................................................
FD548264       --> ..................................................
FD558814       --> ACAATTTACTAAAGAAAAATCTGAAAAACTTATATAGCT...........
EY916212       --> ACAATTTACTAAAGAAAAATCTG...........................

               801    -    851
UN14054        --> GAAACATTCTCAGAATTTC
                   ~~~~~~~~~~~~~~~~~~~
FD529057       <-- ...................
FD530702       <-- ...................
HS106947       <-- GAAACATTCTCAGAATTTC
EX752551       <-- ...................
FD573366       <-- ...................
FD951698       <-- ...................
EW719889       <-- ...................
FD544470       <-- ...................
EY912811       <-- GAAACATTCTCAG......
EX748684       --> ...................
FD532647       --> ...................
EW716017       --> ...................
FD955657       --> ...................
EY917266       --> ...................
FD534897       --> ...................
FD569104       --> ...................
EV535117       --> ...................
FD548264       --> ...................
FD558814       --> ...................
EY916212       --> ...................