1      -     51
UN14081        --> TATATAAATAAATATTAAAAAAATAAATATAAATTTGATTATCTGTTATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937034       <-- ..................................................
EV529827       <-- ..................................................
EY928859       <-- ..................................................
FD945743       <-- ..................................................
FD537972       <-- ..................................................
FD983264       <-- ..................................................
FD961781       <-- ..................................................
FY449247       --> TATATAAATAAATATTAAAAAAATAAATATAAATTTGATTATCTGTTATT
FY452583       --> ..................................TTGATTATCTGTTATT
EX895251       --> ..................................................
EV524964       --> ..................................................
FD541756       --> ..................................................
FD966261       --> ..................................................
FD536286       --> ..................................................
FD941384       --> ..................................................
FY448896       --> ..................................................
FY447088       --> ..................................................
FY429700       --> ..................................................
FY430763       --> ..................................................
FY454219       --> ..................................................
FY446759       --> ..................................................
FY441953       --> ..................................................
FY438625       --> ..................................................
FY431749       --> ..................................................
FY450360       --> ..................................................
FY438278       --> ..................................................
FY452749       --> ..................................................
EY940472       --> ..................................................
EY933370       --> ..................................................
FD950215       --> ..................................................

               51     -    101
UN14081        --> TTCGGCTTTCTTGTGCTGTTGCCACCACAACGTTGTCTTCTCGGGGTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937034       <-- ..................................................
EV529827       <-- ..................................................
EY928859       <-- ..................................................
FD945743       <-- ..................................................
FD537972       <-- ..................................................
FD983264       <-- ..................................................
FD961781       <-- ..................................................
FY449247       --> TTCGGCTTTCTTGTGCTGTTGCCACCACAACGTTGTCTTCTCGGGGTTTA
FY452583       --> TTCGGCTTTCTTGTGCTGTTGCCACCACAACGTTGTCTTCTCGGGGTTTA
EX895251       --> ............ggGCTGTTGCCACCACAACGTTGTCTTCTCGGGGTTTA
EV524964       --> ..................ggGCCACCACAACGTTGTCTTCTCGGGGTTTA
FD541756       --> ..................ggGCCACCACAACGTTGTCTTCTCGGGGTTTA
FD966261       --> .....................ggACCACAACGTTGTCTTCTCGGGGTTTA
FD536286       --> ........................ggACAACGTTGTCTTCTCGGGGTTTA
FD941384       --> ...........................gAACGTTGTCTTCTCGGGGTTTA
FY448896       --> ...................tcggcacgaggCGTTGTCTTCTCGGGGTTTA
FY447088       --> ......................................TCTCGGGGTT-A
FY429700       --> ...........................................GGGTTTA
FY430763       --> ............................................GGTTTA
FY454219       --> ............................................GGTTTA
FY446759       --> .........................................cggcacgag
FY441953       --> ..................................................
FY438625       --> ..................................................
FY431749       --> ..................................................
FY450360       --> ..................................................
FY438278       --> ..................................................
FY452749       --> ..................................................
EY940472       --> ..................................................
EY933370       --> ..................................................
FD950215       --> ..................................................

               101    -    151
UN14081        --> AGTTTGATCTTAATGGCTTCGAATCCAGAGAAAAACCCGCTGATTCCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937034       <-- ..................................................  Raphanus sativus var. oleiformis
EV529827       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY928859       <-- ..................................................  Raphanus sativus var. oleiformis
FD945743       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD537972       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD983264       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD961781       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FY449247       --> AGTTTGATCTTAATGGCTTCGAATCCAGAGAAAAACCCGCTGATTCCTTC  Raphanus sativus cv GSK3-1
FY452583       --> AGTTTGATCTTAATGGCTTCGAATCCAGAGAAAAACCCGCTGATTCCTTC  Raphanus sativus cv GSK3-1
EX895251       --> AGTTTGATCT-AATGGCTTCGAATCCAGAGAAAAACCCGCTGATTCCTTC  Raphanus sativus cv Early Scarlet Globe
EV524964       --> AGTTTGATCT-AATGGCTTCGAATCCAGAGAAAAACCCGCTGATTCCTTC  Raphanus raphanistrum subsp. maritimus
FD541756       --> AGTTTGATCT-AATGGCTTCGAATCCAGAGAAAAACCCGCTGATTCCTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966261       --> AGTTTGATCT-AATGGCTTCGAATCCAGAGAAAAACCCGCTGATTCCTTC  Raphanus raphanistrum subsp. maritimus
FD536286       --> AGTTTGATCT-AATGGCTTCGAATCCAGAGAAAAACCCGCTGATTCCTTC  Raphanus raphanistrum subsp. maritimus
FD941384       --> AGTTTGATCT-AATGGCTTCGAATCCAGAGAAAAACCCGCTGATTCCTTC  Raphanus sativus var. oleiformis
FY448896       --> AGTTTGATCTTAATGGCTTCGAATCCAGAGAAAAACCCGCTGATTCCTTC  Raphanus sativus cv GSK3-1
FY447088       --> AGTTTGATCTTAATGGCTTCGAATCCAGAGAAAA-CCCGCTGATTCCTTC  Raphanus sativus cv GSK3-1
FY429700       --> -GTTTGATCTTAATGGCTTCGAATCCAGAGAAAAACCCGCTGATTCCTTC  Raphanus sativus cv GSK3-1
FY430763       --> -GTTTGATCTTAATGGCTTCGAATCCAGAGAAAAACCCGCTGATTCCTTC  Raphanus sativus cv GSK3-1
FY454219       --> -GTTTGATCTTAATGGCTTCGAATCCAGAGAAAAACCCGCTGATTCCTTC  Raphanus sativus cv GSK3-1
FY446759       --> gGTTTGATCTTAATGGCTTCGAATCCAGAGAAAAACCCGCTGATTCCTTC  Raphanus sativus cv GSK3-1
FY441953       --> ..TTTGATCTTA-TGGCTTCGAATCCAGAGAAAAACCCGCTGATTCCTTC  Raphanus sativus cv GSK3-1
FY438625       --> .............TGGCTTCGAATCC-GAGAAAAACCCGCTGATTCCTTC  Raphanus sativus cv GSK3-1
FY431749       --> ..................................ACCCGCTGATTCCTTC  Raphanus sativus cv GSK3-1
FY450360       --> ..................................ACCCGCTGATTCCTTC  Raphanus sativus cv GSK3-1
FY438278       --> ...................................CCCGCTGATTCCTTC  Raphanus sativus cv GSK3-1
FY452749       --> ...................................CCCGCTGATTCCTTC  Raphanus sativus cv GSK3-1
EY940472       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY933370       --> ..................................................  Raphanus sativus var. oleiformis
FD950215       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               151    -    201
UN14081        --> AGATGAGAAAACCGAATCGAAGGAGGAGAGCAAGAGTCCTAAACCGGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937034       <-- ..................................................
EV529827       <-- ..................................................
EY928859       <-- ..................................................
FD945743       <-- ..................................................
FD537972       <-- ..................................................
FD983264       <-- ..................................................
FD961781       <-- ..................................................
FY449247       --> AGATGAGAAAACCGAATCGAAGGAGGAGAGCAAGAGTCCTAAACCGGAAT
FY452583       --> AGATGAGAAAACCGAATCGAAGGAGGAGAGCAAGAGTCCTAAACCGGAAT
EX895251       --> AGATGAGAAAACCGAATCGAAGGAGGAGAGCAAGAGTCCTAAACCGGAAT
EV524964       --> AGATGAGAAAACCGAATCGAAGGAGGAGAGCAAGAGTCCTAAACCGGAAT
FD541756       --> AGATGAGAAAACCGAATCAAAGGAGGAGAGCAAGAGTCCCAAACCGGAAT
FD966261       --> AGATGAGAAAACCGAATCGAAGGAGGAGAGCAAGAGTCCTAAACCGGAAT
FD536286       --> AGATGAGAAAACCGAATCGAAGGAGGAGAGCAAGAGTCCTAAACCGGAAT
FD941384       --> AGATGAGAAAACCGAATCAAAGGAGGAGAGCAAGAGTCCCAAACCGGAAT
FY448896       --> AGATGAGAAAACCGAATCGAAGGAGGAGAGCAAGAGTCCTAAACCGGAAT
FY447088       --> AGATGAGAAAACCGAATCGAAGGAGGAGAGCAAGAGTCCTAAACCGGAAT
FY429700       --> AGATGAGAAAACCGAATCGAAGGAGGAGAGCAAGAGTCCTAAACCGGAAT
FY430763       --> AGATGAGAAAACCGAATCGAAGGAGGAGAGCAAGAGTCCTAAACCGGAAT
FY454219       --> AGATGAGAAAACCGAATCGAAGGAGGAGAGCAAGAGTCCTAAACCGGAAT
FY446759       --> AGATGAGAAAACCGAATCGAAGGAGGAGAGCAAGAGTCCTAAACCGGAAT
FY441953       --> AGATGAGAAAACCGAATCGAAGGAGGAGAGCAAGAGTCCTAAACCGGAAT
FY438625       --> AGATGAGAAAACCGAATCGAAGGAGGAGAGCAAGAGTCCTAAACCGGAAT
FY431749       --> AGATGAGAAAACCGAATCGAAGGAGGAGAGCAAGAGTCCTAAACCGGAAT
FY450360       --> AGATGAGAAAACCGAATCGAAGGAGGAGAGCAAGAGTCCTAAACCGGAAT
FY438278       --> AGATGAGAAAACCGAATCGAAGGAGGAGAGCAAGAGTCCTAAACCGGAAT
FY452749       --> AGATGAGAAAACCGAATCGAAGGAGGAGAGCAAGAGTCCTAAACCGGAAT
EY940472       --> ..................................................
EY933370       --> ..................................................
FD950215       --> ..................................................

               201    -    251
UN14081        --> CAGCAGCAGCAGCAGCATCTGGGAGTTCACCTTCATCACCTAACCCTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937034       <-- ..................................................
EV529827       <-- ..................................................
EY928859       <-- ..................................................
FD945743       <-- ..................................................
FD537972       <-- ..................................................
FD983264       <-- ..................................................
FD961781       <-- ..................................................
FY449247       --> CAGCAGCAGCAGCAGCATCTGGGAGTTCACCTTCATCACCTAACCCTGCT
FY452583       --> CAGCAGCAGCAGCAGCATCTGGGAGTTCACCTTCATCACCTAACCCTGCT
EX895251       --> CAGCAGCAGCAGCAGCATCTGGGAGTTCACCTTCATCACCTAACCCTGCT
EV524964       --> CAGCAGCAGCAGCAGCATCTGGGAGTTCACCTTCATCACCTAACCCTGCT
FD541756       --> CAGCAGCAGCAGCAGCATCTGGGAGTTCACCTTCATCACCTAATCCTCCT
FD966261       --> CAGCAGCAGCAGCAGCATCTGGGAGTTCACCTTCATCACCTAACCCTGCT
FD536286       --> CAGCAGCAGCAGCAGCATCTGGGAGTTCACCTTCATCACCTAACCCTGCT
FD941384       --> CAGCAGCAGCAGCAGCATCTGGGATTTCACCTTCACCACCTAATCCTCCT
FY448896       --> CAGCAGCAGCAGCAGCATCTGGGAGTTCACCTTCATCACCTAACCCTGCT
FY447088       --> CAGCAGCAGCAGCAGCATCTGGGAATTCACCTTCATCACCTAACCCTGCT
FY429700       --> CAGCAGCAGCAGCAGCATCTGGGAGTTCACCTTCATCACCTAACCCTGCT
FY430763       --> CAGCAGCAGCAGCAGCATCTGGGAGTTCACCTTCATCACCTAACCCTGCT
FY454219       --> CAGCAGCAGCAGCAGCATCTGGGAGTTCACCTTCATCACCTAACCCTGCT
FY446759       --> CAGCAGCAGCAGCAGCATCTGGGAGTTCACCTTCATCACCTAACCCTGCT
FY441953       --> CAGCAGCAGCAGCAGCATCTGGGAGTTCACCTTCATCACCTAACCCTGCT
FY438625       --> CAGCAGCAGCAGCAGCATCTGGGAGTTCACCTTCATCACCTAACCCTGCT
FY431749       --> CAGCAGCAGCAGCAGCATCTGGGAGTTCACCTTCATCACCTAACCCTGCT
FY450360       --> CAGCAGCAGCAGCAGCATCTGGGAGTTCACCTTCATCACCTAACCCTGCT
FY438278       --> CAGCAGCAGCAGCAGCATCTGGGAGTTCACCTTCATCACCTAACCCTGCT
FY452749       --> CAGCAGCAGCAGCAGCATCTGGGAGTTCACCTTCATCACCTAACCCTGCT
EY940472       --> .....................GGAGTTCACCTTCATCACCTAACCCTGCT
EY933370       --> ..........................gCACCTTCATCACCTAATCCTCCT
FD950215       --> ..................................................

               251    -    301
UN14081        --> GGCTTGAATTTCAATGCTTTTGATTTCTCAAACATGGCTAGTATCCTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937034       <-- ..................................................
EV529827       <-- ..................................................
EY928859       <-- ..................................................
FD945743       <-- ..................................................
FD537972       <-- ..................................................
FD983264       <-- ..................................................
FD961781       <-- ..................................................
FY449247       --> GGCTTGAATTTCAATGCTTTTGATTTCTCAAACATGGCTAGTATCCTCAA
FY452583       --> GGCTTGAATTTCAATGCTTTTGATTTCTCAAACATGGCTAGTATCCTCAA
EX895251       --> GGCTTGAATTTCAATGCTTTTGATTTCTCAAACATGGCTAGTATCCTCAA
EV524964       --> GGCTTGAATTTCAATGCTTTTGATTTCTCAAACATGGCTAGTATCCTCAA
FD541756       --> GGCTTGAATTTCAATGCTTTTGATTTCTCAAACATGGCTAGTATCCTCAA
FD966261       --> GGCTTGAATTTCAATGCTTTTGATTTCTCAAACATGGCTAGTATCCTCAA
FD536286       --> GGCTTGAATTTCAATGCTTTTGATTTCTCAAACATGGCTAGTATCCTCAA
FD941384       --> GGCTTGAATTTCAATGCTTTTGATTTCTCAAACATGGCTAGTATCCTCAA
FY448896       --> GGCTTGAATTTCAATGCTTTTGATTTCTCAAACATGGCTAGTATCCTCAA
FY447088       --> GGCTTGAATTTCAATGCTTTTGATTTCTCAAACATGGCTAGTATCCTCAA
FY429700       --> GGCTTGAATTTCAATGCTTTTGATTTCTCAAACATGGCTAGTATCCTCAA
FY430763       --> GGCTTGAATTTCAATGCTTTTGATTTCTCAAACATGGCTAGTATCCTCAA
FY454219       --> GGCTTGAATTTCAATGCTTTTGATTTCTCAAACATGGCTAGTATCCTCAA
FY446759       --> GGCTTGAATTTCAATGCTTTTGATTTCTCAAACATGGCTAGTATCCTCAA
FY441953       --> GGCTTGAATTTCAATGCTTTTGATTTCTCAAACATGGCTAGTATCCTCAA
FY438625       --> GGCTTGAATTTCAATGCTTTTGATTTCTCAAACATGGCTAGTATCCTCAA
FY431749       --> GGCTTGAATTTCAATGCTTTTGATTTCTCAAACATGGCTAGTATCCTCAA
FY450360       --> GGCTTGAATTTCAATGCTTTTGATTTCTCAAACATGGCTAGTATCCTCAA
FY438278       --> GGCTTGAATTTCAATGCTTTTGATTTCTCAAACATGGCTAGTATCCTCAA
FY452749       --> GGCTTGAATTTCAATGCTTTTGATTTCTCAAACATGGCTAGTATCCTCAA
EY940472       --> GGCTTGAATTTCAATGCTTTTGATTTCTCAAACATGGCTAGTATCCTCAA
EY933370       --> GGCTTGAATTTCGATGCTTTTGATTTCTCAAACATGGCTAGTATCCTCAA
FD950215       --> ..................................................

               301    -    351
UN14081        --> CGATCCAAGCATCAGAGAATTGGCTGAGCAGATTGCTAAAGATCCTGCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937034       <-- ..................................................  Raphanus sativus var. oleiformis
EV529827       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY928859       <-- ..................................................  Raphanus sativus var. oleiformis
FD945743       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD537972       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD983264       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD961781       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FY449247       --> CGATCCAAGCATCAGAGAATTGGCTGAGCAGATTGCTAAAGATCCTGCCT  Raphanus sativus cv GSK3-1
FY452583       --> CGATCCAAGCATCAGAGAATTGGCTGAGCAGATTGCTAAAGATCCTGCCT  Raphanus sativus cv GSK3-1
EX895251       --> CGATCCAAGCATCAGAGAATTGGCGGAACAGATTGCTAAAGATCCTGCCT  Raphanus sativus cv Early Scarlet Globe
EV524964       --> CGATCCAAGCATCAGAGAATTGGCGGAGCAGATTGCTAAAGATCCTGCCT  Raphanus raphanistrum subsp. maritimus
FD541756       --> CGATCCAAGCATCAGAGAATTGGCGGAGCAGATTGCTAAAGATCCTGCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966261       --> CGATCCAAGCA---GAGAATTGGCGGAGCAGATTGCTAAAGATCCTGCCT  Raphanus raphanistrum subsp. maritimus
FD536286       --> CGATCCAAGCATCAGAGAATTGGCGGAGCAGATTGCTAAAGATCCTGCCT  Raphanus raphanistrum subsp. maritimus
FD941384       --> CGATCCAAGCATCAGAGAATTGTCGGAGCAGATTGCTAAAGATCCTGCCT  Raphanus sativus var. oleiformis
FY448896       --> CGATCCAAGCATCAGAGAATTGGCTGAGCAGATTGCTAAAGATCCTGCCT  Raphanus sativus cv GSK3-1
FY447088       --> CGATCCAAGCATCAGAGAATTGGCTGAGCAGATTGCTAAAGATCCTGCCT  Raphanus sativus cv GSK3-1
FY429700       --> CGATCCAAGCATCAGAGAATTGGCTGAGCAGATTGCTAAAGATCCTGCCT  Raphanus sativus cv GSK3-1
FY430763       --> CGATCCAAGCATCAGAGAATTGGCTGAGCAGATTGCTAAAGATCCTGCCT  Raphanus sativus cv GSK3-1
FY454219       --> CGATCCAAGCATCAGAGAATTGGCTGAGCAGATTGCTAAAGATCCTGCCT  Raphanus sativus cv GSK3-1
FY446759       --> CGATCCAAGCATCAGAGAATTGGCTGAGCAGATTGCTAAAGATCCTGCCT  Raphanus sativus cv GSK3-1
FY441953       --> CGATCCAAGCATCAGAGAATTGGCTGAGCAGATTGCTAAAGATCCTGCCT  Raphanus sativus cv GSK3-1
FY438625       --> CGATCCAAGCATCAGAGAATTGGCTGAGCAGATTGCTAAAGATCCTGCCT  Raphanus sativus cv GSK3-1
FY431749       --> CGATCCAAGCATCAGAGAATTGGCTGAGCAGATTGCTAAAGATCCTGCCT  Raphanus sativus cv GSK3-1
FY450360       --> CGATCCAAGCATCAGAGAATTGGCTGAGCAGATTGCTAAAGATCCTGCCT  Raphanus sativus cv GSK3-1
FY438278       --> CGATCCAAGCATCAGAGAATTGGCTGAGCAGATTGCTAAAGATCCTGCCT  Raphanus sativus cv GSK3-1
FY452749       --> CGATCCAAGCATCAGAGAATTGGCTGAGCAGATTGCTAAAGATCCTGCCT  Raphanus sativus cv GSK3-1
EY940472       --> CGATCCAAGCATCAGAGAATTGGCGGAGCAGATTGCTAAAGATCCTGCCT  Raphanus sativus cv Early Scarlet Globe
EY933370       --> CGATCCAAGCATCAGAGAATTGGCGGAGCAGATTGCTAAAGATCCTGCCT  Raphanus sativus var. oleiformis
FD950215       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               351    -    401
UN14081        --> TTAACCAGTTAGCTGAGCAGCTTCAGAGATCTATCCCAAACGCAGCTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937034       <-- ..................................................  Raphanus sativus var. oleiformis
EV529827       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY928859       <-- ..................................................  Raphanus sativus var. oleiformis
FD945743       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD537972       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD983264       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD961781       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FY449247       --> TTAACCAGTTAGCTGAGCAGCTTCAGAGATCTATCCCAAACGCAGCTGAG  Raphanus sativus cv GSK3-1
FY452583       --> TTAACCAGTTAGCTGAGCAGCTTCAGAGATCTATCCCAAACGCAGCTGAG  Raphanus sativus cv GSK3-1
EX895251       --> TTAACCAGTTGGCTGAGCAGCTTCAGAGATCTATCCCAAACGCAGCTGAG  Raphanus sativus cv Early Scarlet Globe
EV524964       --> TTAACCAGTTGGCTGAGCAGCTTCAGAGATCTATCCCAAACGCAGCTGAG  Raphanus raphanistrum subsp. maritimus
FD541756       --> TTAACCAGTTGGTTGAGCAGCTTCAGAGATCTATCCCAAACGCAGCTGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966261       --> TTAACCAGTTGGCTGAGCAGCTTCAGAGATCTATCCCAAACGCAGCTGAG  Raphanus raphanistrum subsp. maritimus
FD536286       --> T-AACCAGTTGGCTGAGCAGCTTCAGAGATCTATCCCAAACGCAGCTGAG  Raphanus raphanistrum subsp. maritimus
FD941384       --> TTAACCAGTTGGCTGAGCAGCTTCAGAGATCTATCCCAAACGCAGCTGAG  Raphanus sativus var. oleiformis
FY448896       --> TTAACCAGTTAGCTGAGCAGCTTCAGAGATCTATCCCAAACGCAGCTGAG  Raphanus sativus cv GSK3-1
FY447088       --> TTAACCAGTTAGCTGAGCAGCTTCAGAGATCTATCCCAAACGCAGCTGAG  Raphanus sativus cv GSK3-1
FY429700       --> TTAACCAGTTAGCTGAGCAGCTTCAGAGATCTATCCCAAACGCAGCTGAG  Raphanus sativus cv GSK3-1
FY430763       --> TTAACCAGTTAGCTGAGCAGCTTCAGAGATCTATCCCAAACGCAGCTGAG  Raphanus sativus cv GSK3-1
FY454219       --> TTAACCAGTTAGCTGAGCAGCTTCAGAGATCTATCCCAAACGCAGCTGAG  Raphanus sativus cv GSK3-1
FY446759       --> TTAACCAGTTAGCTGAGCAGCTTCAGAGATCTATCCCAAACGCAGCTGAG  Raphanus sativus cv GSK3-1
FY441953       --> TTAACCAGTTAGCTGAGCAGCTTCAGAGATCTATCCCAAACGCAGCTGAG  Raphanus sativus cv GSK3-1
FY438625       --> TTAACCAGTTAGCTGAGCAGCTTCAGAGATCTATCCCAAACGCAGCTGAG  Raphanus sativus cv GSK3-1
FY431749       --> TTAACCAGTTAGCTGAGCAGCTTCAGAGATCTATCCCAAACGCAGCTGAG  Raphanus sativus cv GSK3-1
FY450360       --> TTAACCAGTTAGCTGAGCAGCTTCAGAGATCTATCCCAAACGCAGCTGAG  Raphanus sativus cv GSK3-1
FY438278       --> TTAACCAGTTAGCTGAGCAGCTTCAGAGATCTATCCCAAACGCAGCTGAG  Raphanus sativus cv GSK3-1
FY452749       --> TTAACCAGTTAGCTGAGCAGCTTCAGAGATCTATCCCAAACGCAGCTGAG  Raphanus sativus cv GSK3-1
EY940472       --> TTAACCAGTTGGCTGAGTAGCTTCAGAGATCTATCCCAAACGCAGCTGAG  Raphanus sativus cv Early Scarlet Globe
EY933370       --> TTAACCAGTTGGCTGAGCAGCTTCAGAGATCTATCCCAAACGCAGCTGAG  Raphanus sativus var. oleiformis
FD950215       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               401    -    451
UN14081        --> GGAGGAG---GAGGAGGTTTCCCTAATATTGATCCACAACAGTATGTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937034       <-- ................................................AG  Raphanus sativus var. oleiformis
EV529827       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY928859       <-- ..................................................  Raphanus sativus var. oleiformis
FD945743       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD537972       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD983264       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD961781       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FY449247       --> GGAGGAG---GAGGAGGTTTCCCTAATATTGATCCACAACAGTATGTCAG  Raphanus sativus cv GSK3-1
FY452583       --> GGAGGAG---GAGGAGGTTTCCCTAATATTGATCCACAACAGTATGTCAG  Raphanus sativus cv GSK3-1
EX895251       --> GGAGGAG---CAGGAGGTTTCCCTAACATTGATCCACAACAGTATGTCAG  Raphanus sativus cv Early Scarlet Globe
EV524964       --> GGAGGAG---CAGGAGGTTTCCCTAACATTGATCCACAACAGTATGTCAG  Raphanus raphanistrum subsp. maritimus
FD541756       --> GGAGGAGCAGGAGGAGGTTTCCCTAACATTGATCCACAACAGTATGTCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966261       --> GGAGGAG---CAGGAGGTTTCCCTAACATTGATCCACAACAGTATGTCAG  Raphanus raphanistrum subsp. maritimus
FD536286       --> GGAGGAG---CAGGAGGTTTCCCTAACATTGATCCACAACAGTATGTCAG  Raphanus raphanistrum subsp. maritimus
FD941384       --> GGAGGAGCAGGAGGAGGTTTCCCTAACATTGATCCACAACAGTATGTCAG  Raphanus sativus var. oleiformis
FY448896       --> GGAGGAG---GAGGAGGTTTCCCTAATATTGATCCACAACAGTATGTCAG  Raphanus sativus cv GSK3-1
FY447088       --> GGAGGAG---GAGGAGGTTTCCCTAATATTGATCCACAACAGTATGTCAG  Raphanus sativus cv GSK3-1
FY429700       --> GGAGGAG---GAGGAGGTTTCCCTAATATTGATCCACAACAGTATGTCAG  Raphanus sativus cv GSK3-1
FY430763       --> GGAGGAG---GAGGAGGTTTCCCTAATATTGATCCACAACAGTATGTCAG  Raphanus sativus cv GSK3-1
FY454219       --> GGAGGAG---GAGGAGGTTTCCCTAATATTGATCCACAACAGTATGTCAG  Raphanus sativus cv GSK3-1
FY446759       --> GGAGGAG---GAGGAGGTTTCCCTAATATTGATCCACAACAGTATGTCAG  Raphanus sativus cv GSK3-1
FY441953       --> GGAGGAG---GAGGAGGTTTCCCTAATATTGATCCACAACAGTATGTCAG  Raphanus sativus cv GSK3-1
FY438625       --> GGAGGAG---GAGGAGGTTTCCCTAATATTGATCCACAACAGTATGTCAG  Raphanus sativus cv GSK3-1
FY431749       --> GGAGGAG---GAGGAGGTTTCCCTAATATTGATCCACAACAGTATGTCAG  Raphanus sativus cv GSK3-1
FY450360       --> GGAGGAG---GAGGAGGTTTCCCTAATATTGATCCACAACAGTATGTCAG  Raphanus sativus cv GSK3-1
FY438278       --> GGAGGAG---GAGGAGGTTTCCCTAATATTGATCCACAACAGTATGTCAG  Raphanus sativus cv GSK3-1
FY452749       --> GGAGGAG---GAGGAGGTTTCCCTAATATTGATCCACAACAGTATGTCAG  Raphanus sativus cv GSK3-1
EY940472       --> GGAGGAG---CAGGAGGTTTCCCTAACATTGATCCACAACAGTATGTCAG  Raphanus sativus cv Early Scarlet Globe
EY933370       --> GGAGGAGCAGGAGGAGGTTTCCCTAACATTGATCCACAACAGTATGTCAG  Raphanus sativus var. oleiformis
FD950215       --> ..........................................gATGTCAG  Raphanus sativus cv Early Scarlet Globe

               451    -    501
UN14081        --> CACAATGGAACAGGTTATGCATAACCCCGAGTTTCAGACCATGGCTGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937034       <-- CACAATGCAACAGGTTATGCATAACCCCGAGTTTCAGACCATGGCTGAGC  Raphanus sativus var. oleiformis
EV529827       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY928859       <-- ..................................................  Raphanus sativus var. oleiformis
FD945743       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD537972       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD983264       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD961781       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FY449247       --> CACAATGGAACAGGTTATGCATAACCCCGAGTTTCAGACCATGGCTGAGC  Raphanus sativus cv GSK3-1
FY452583       --> CACAATGGAACAGGTTATGCATAACCCCGAGTTTCAGACCATGGCTGAGC  Raphanus sativus cv GSK3-1
EX895251       --> CACAATGCAACAGGTTATGCATAACCCCGAGTTTCAAACCATGGCTGAGC  Raphanus sativus cv Early Scarlet Globe
EV524964       --> CACAATGCAACAGGTTATGCATAACCCCGAGTTTCAAACCATGGCTGAGC  Raphanus raphanistrum subsp. maritimus
FD541756       --> CACAATGCAACAGGTTATGCATAACCCCGAGTTTCAGACCATGGCTGAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966261       --> CACAATGCAACAGGTTATGCATAACCCCGAGTTTCAAACCATGGCTGAGC  Raphanus raphanistrum subsp. maritimus
FD536286       --> CACAATGCAACAGGTTATGCATAACCCCGAGTTTCAAACCATGGCTGAGC  Raphanus raphanistrum subsp. maritimus
FD941384       --> CACAATGCAACAGGTTATGCATAACCCCGAGTTTCAGACCATGGCTGAGC  Raphanus sativus var. oleiformis
FY448896       --> CACAATGGAACAGGTTATGCATAACCCCGAGTTTCAGACCATGGCTGAGC  Raphanus sativus cv GSK3-1
FY447088       --> CACAATGGAACAGGTTATGCATAACCCCGAGTTTCAGACCATGGCTGAGC  Raphanus sativus cv GSK3-1
FY429700       --> CACAATGGAACAGGTTATGCATAACCCCGAGTTTCAGACCATGGCTGAGC  Raphanus sativus cv GSK3-1
FY430763       --> CACAATGGAACAGGTTATGCATAACCCCGAGTTTCAGACCATGGCTGAGC  Raphanus sativus cv GSK3-1
FY454219       --> CACAATGGAACAGGTTATGCATAACCCCGAGTTTCAGACCATGGCTGAGC  Raphanus sativus cv GSK3-1
FY446759       --> CACAATGGAACAGGTTATGCATAACCCCGAGTTTCAGACCATGGCTGAGC  Raphanus sativus cv GSK3-1
FY441953       --> CACAATGGAACAGGTTATGCATAACCCCGAGTTTCAGACCATGGCTGAGC  Raphanus sativus cv GSK3-1
FY438625       --> CACAATGGAACAGGTTATGCATAACCCCGAGTTTCAGACCATGGCTGAGC  Raphanus sativus cv GSK3-1
FY431749       --> CACAATGGAACAGGTTATGCATAACCCCGAGTTTCAGACCATGGCTGAGC  Raphanus sativus cv GSK3-1
FY450360       --> CACAATGGAACAGGTTATGCATAACCCCGAGTTTCAGACCATGGCTGAGC  Raphanus sativus cv GSK3-1
FY438278       --> CACAATGGAACAGGTTATGCATAACCCCGAGTTTCAGACCATGGCTGAGC  Raphanus sativus cv GSK3-1
FY452749       --> CACAATGGAACAGGTTATGCATAACCCCGAGTTTCAGACCATGGCTGAGC  Raphanus sativus cv GSK3-1
EY940472       --> CACAATGCAACAGGTTATGCATAACCCCGAGTTTCAAACCATGGCTGAGC  Raphanus sativus cv Early Scarlet Globe
EY933370       --> CACAATGCAACAGGTTATGCATAACCCCGAGTTTCAGACCATGGCTGAGC  Raphanus sativus var. oleiformis
FD950215       --> CACAATGCAACAGGTTATGCATAACCCCGAGTTTCAAACCATGGCTGAGC  Raphanus sativus cv Early Scarlet Globe

               501    -    551
UN14081        --> GACTTGGTAACGCCTTAGTCAAGGATCCACAAATGTCTCCCTTTTTGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937034       <-- GACTTGGTAACGC-TTAGTCAAGGATCCACAAATGTCTCCCTTTT-GGAT
EV529827       <-- ..............................................GGAT
EY928859       <-- ..................................................
FD945743       <-- ..................................................
FD537972       <-- ..................................................
FD983264       <-- ..................................................
FD961781       <-- ..................................................
FY449247       --> GACTTGGTAACGCCTTAGTCAAGGATCCACAAATGTCTCCCTTTTTGGAT
FY452583       --> GACTTGGTAACGCCTTAGTCAAGGATCCACAAATGTCTCCCTTTTTGGAT
EX895251       --> GACTTGGTAACGCCTTAGTCAAGGATC-ACAAATGTCTCCCTTTTTGGAT
EV524964       --> GACTTGGTAACGCCTTAGTCAAGGATCCACAAATGTCTCCCTTTTTGGAT
FD541756       --> GACTTGGTAACGCCTTAGTCAAGGATCCACAAATGTCTCCCTTTTTGGAT
FD966261       --> GACTTGGTAACGCCTTAGTCAAGGATCCACAAATGTCTCCCTTTTTGGAT
FD536286       --> GACTTGGTAACGCCTTAGTCAAGGATCCACAAATGTCTCCCTTTTTGGAT
FD941384       --> GACTTGGTAACGCCTTAGTCAAGGATCCACAAATGTCTCCCTTTTTGGAT
FY448896       --> GACTTGGTAACGCCTTAGTCAAGGATCCACAAATGTCTCCCTTTTTGGAT
FY447088       --> GACTTGGTAACGCCTTAGTCAAGGATCCACAAATGTCTCCCTTTTTGGAT
FY429700       --> GACTTGGTAACGCCTTAGTCAAGGATCCACAAATGTCTCCCTTTTTGGAT
FY430763       --> GACTTGGTAACGCCTTAGTCAAGGATCCACAAATGTCTCCCTTTTTGGAT
FY454219       --> GACTTGGTAACGCCTTAGTCAAGGATCCACAAATGTCTCCCTTTTTGGAT
FY446759       --> GACTTGGTAACGCCTTAGTCAAGGATCCACAAATGTCTCCCTTTTTGGAT
FY441953       --> GACTTGGTAACGCCTTAGTCAAGGATCCACAAATGTCTCCCTTTTTGGAT
FY438625       --> GACTTGGTAACGCCTTAGTCAAGGATCCACAAATGTCTCCCTTTTTGGAT
FY431749       --> GACTTGGTAACGCCTTAGTCAAGGATCCACAAATGTCTCCCTTTTTGGAT
FY450360       --> GACTTGGTAACGCCTTAGTCAAGGATCCACAAATGTCTCCCTTTTTGGAT
FY438278       --> GACTTGGTAACGCCTTAGTCAAGGATCCACAAATGTCTCCCTTTTTGGAT
FY452749       --> GACTTGGTAACGCCTTAGTCAAGGATCCACAAATGTCTCCCTTTTTGGAT
EY940472       --> GACTTGGTAACGCCTTAGTCAAGGATCCACAAATGTCTCCCTTTTTGGAT
EY933370       --> GACTTGGTAACGCCTTAGTCAAGGATCCACAAATGTCTCCCTTTTTGGAT
FD950215       --> GACTTGGTAACGCCTTAGTCAAGGATCCACAAATGTCTCCCTTTTTGGAT

               551    -    601
UN14081        --> GCTTTCTCAAACCCTGAAACAGCTGAGAACTTTACTGAGCGTATGGCACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937034       <-- GCTTTCTCGAACCCTGAAACAGCTGAGAACTTTACTGAGCGTATGGCGCG  Raphanus sativus var. oleiformis
EV529827       <-- GCTTTCTCAAACCCTGAAACGGCTGAGAACTTTACTGAGCGTATGGCACA  Raphanus raphanistrum subsp. maritimus
EY928859       <-- .................AACAGCTGGGAACTTTACTGAGCGTATGGCGCG  Raphanus sativus var. oleiformis
FD945743       <-- .................AACGGCTGA-AACTTTACTGAGCGTATGGCACG  Raphanus sativus cv Early Scarlet Globe
FD537972       <-- ....................................GAGCGTATGGCGCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD983264       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD961781       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FY449247       --> GCTTTCTCAAACCCTGAAACAGCTGAGAACTTTACTGAGCGTATGGCACG  Raphanus sativus cv GSK3-1
FY452583       --> GCTTTCTCAAACCCTGAAACAGCTGAGAACTTTACTGAGCGTATGGCACG  Raphanus sativus cv GSK3-1
EX895251       --> GCTTTCTCAAACCCTGAAACGGCTGAGAACTTTACTGAGCGTATGGCACG  Raphanus sativus cv Early Scarlet Globe
EV524964       --> GCTTTCTCAAACCCTGAAACGGCTGAGAACTTTACTGAGCGTATGGCACA  Raphanus raphanistrum subsp. maritimus
FD541756       --> GCTTTCTCGAACCCTGAAACAGCTGAGAACTTTACTGAGCGTATGGCGCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966261       --> GCTTTCTCAAACCCTGAAACGGCTGAGAACTTTACTGAGCGTATGGCACA  Raphanus raphanistrum subsp. maritimus
FD536286       --> GCTTTCTCAAACCCTGAAACGGCTGAGAACTTTACTGAGCGTATGGCACA  Raphanus raphanistrum subsp. maritimus
FD941384       --> GCTTTCTCGAACCCTGAAACAGCTGAGAACTTTACTGAGCGTATGGCGCG  Raphanus sativus var. oleiformis
FY448896       --> GCTTTCTCAAACCCTGAAACAGCTGAGAACTTTACTGAGCGTATGGCACG  Raphanus sativus cv GSK3-1
FY447088       --> GCTTTCTCAAACCCTGAAACAGCTGAGAACTTTACTGAGCGTATGGCACG  Raphanus sativus cv GSK3-1
FY429700       --> GCTTTCTCAAACCCTGAAACAGCTGAGAACTTTACTGAGCGTATGGCACG  Raphanus sativus cv GSK3-1
FY430763       --> GCTTTCTCAAACCCTGAAACAGCTGAGAACTTTACTGAGCGTATGGCACG  Raphanus sativus cv GSK3-1
FY454219       --> GCTTTCTCAAACCCTGAAACAGCTGAGAACTTTACTGAGCGTATGGCACG  Raphanus sativus cv GSK3-1
FY446759       --> GCTTTCTCAAACCCTGAAACAGCTGAGAACTTTACTGAGCGTATGGCACG  Raphanus sativus cv GSK3-1
FY441953       --> GCTTTCTCAAACCCTGAAACAGCTGAGAACTTTACTGAGCGTATGGCACG  Raphanus sativus cv GSK3-1
FY438625       --> GCTTTCTCAAACCCTGAAACAGCTGAGAACTTTACTGAGCGTATGGCACG  Raphanus sativus cv GSK3-1
FY431749       --> GCTTTCTCAAACCCTGAAACAGCTGAGAACTTTACTGAGCGTATGGCACG  Raphanus sativus cv GSK3-1
FY450360       --> GCTTTCTCAAACCCTGAAACAGCTGAGAACTTTACTGAGCGTATGGCACG  Raphanus sativus cv GSK3-1
FY438278       --> GCTTTCTCAAACCCTGAAACAGCTGAGAACTTTACTGAGCGTATGGCACG  Raphanus sativus cv GSK3-1
FY452749       --> GCTTTCTCAAACCCTGAAACAGCTGAGAACTTTACTGAGCGTATGGCACG  Raphanus sativus cv GSK3-1
EY940472       --> GCTTTCTCAAACCCTGAAACGGCTGAGAACTTTACTGAGCGTATGGCACG  Raphanus sativus cv Early Scarlet Globe
EY933370       --> GCTTTCTCGAACCCTGAAACAGCTGGGAACTTTACTGAGCGTATGGCGCG  Raphanus sativus var. oleiformis
FD950215       --> GCTTTCTCAAACCCTGAAACGGCTGA-AACTTTACTGAGCGTATGGCACG  Raphanus sativus cv Early Scarlet Globe

               601    -    651
UN14081        --> GTTGAAAGAAGATCCAGAGTTGAAACCTATACTTGATGAGATTGATGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937034       <-- GTTGAAAGAAGATCCGGAGTTGAAACCTATACTTGATGAGATTGATGCTG  Raphanus sativus var. oleiformis
EV529827       <-- GTTGAAAGAAGATCCAGAGTTGAAACCTATACTTGATGAGATTGATGCTG  Raphanus raphanistrum subsp. maritimus
EY928859       <-- GTTGAAAGAAGATCCGGAGTTGAAACCTATACTTGATGAGATTGATGCTG  Raphanus sativus var. oleiformis
FD945743       <-- GTTGAAAGAAGATCCAGAGTTGAAACCTATACTTGATGAGATTGATGCTG  Raphanus sativus cv Early Scarlet Globe
FD537972       <-- GTTGAAAGAAGATCCGGAGTTGAAACCTATACTTGATGAGATTGATGCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD983264       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD961781       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FY449247       --> GTTGAAAGAAGATCCAGAGTTGAAACCTATACTTGATGAGATTGATGCTG  Raphanus sativus cv GSK3-1
FY452583       --> GTTGAAAGAAGATCCAGAGTTGAAACCTATACTTGATGAGATTGATGCTG  Raphanus sativus cv GSK3-1
EX895251       --> GTTGAAAGAAGATCCAGAGTTGAAACCTATACTTGATGAGATTGATGCTG  Raphanus sativus cv Early Scarlet Globe
EV524964       --> GTTGAAAGAAGATCCAGAGTTGAAACCTATACTTGATGAGATTGATGCTG  Raphanus raphanistrum subsp. maritimus
FD541756       --> GTTGAAAGAAGATCCGGAGTTGAAACCTATACTTGATGAGATTGATGCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966261       --> GTTGAAAGAAGATCCAGAGTTGAAACCTATACTTGATGAGATTGATGCTG  Raphanus raphanistrum subsp. maritimus
FD536286       --> GTTGAAAGAAGATCCAGAGTTGAAACCTATACTTGATGAGATTGATGCTG  Raphanus raphanistrum subsp. maritimus
FD941384       --> GTTGAAAGAAGATCCGGAGTTGAAACCTATACTTGATGAGATTGATGCTG  Raphanus sativus var. oleiformis
FY448896       --> GTTGAAAGAAGATCCAGAGTTGAAACCTATACTTGATGAGATTGATGCTG  Raphanus sativus cv GSK3-1
FY447088       --> GTTGAAAGAAGATCCAGAGTTGAAACCTATACTTGATGAGATTGATGCTG  Raphanus sativus cv GSK3-1
FY429700       --> GTTGAAAGAAGATCCAGAGTTGAAACCTATACTTGATGAGATTGATGCTG  Raphanus sativus cv GSK3-1
FY430763       --> GTTGAAAGAAGATCCAGAGTTGAAACCTATACTTGATGAGATTGATGCTG  Raphanus sativus cv GSK3-1
FY454219       --> GTTGAAAGAAGATCCAGAGTTGAAACCTATACTTGATGAGATTGATGCTG  Raphanus sativus cv GSK3-1
FY446759       --> GTTGAAAGAAGATCCAGAGTTGAAACCTATACTTGATGAGATTGATGCTG  Raphanus sativus cv GSK3-1
FY441953       --> GTTGAAAGAAGATCCAGAGTTGAAACCTATACTTGATGAGATTGATGCTG  Raphanus sativus cv GSK3-1
FY438625       --> GTTGAAAGAAGATCCAGAGTTGAAACCTATACTTGATGAGATTGATGCTG  Raphanus sativus cv GSK3-1
FY431749       --> GTTGAAAGAAGATCCAGAGTTGAAACCTATACTTGATGAGATTGATGCTG  Raphanus sativus cv GSK3-1
FY450360       --> GTTGAAAGAAGATCCAGAGTTGAAACCTATACTTGATGAGATTGATGCTG  Raphanus sativus cv GSK3-1
FY438278       --> GTTGAAAGAAGATCCAGAGTTGAAACCTATACTTGATGAGATTGATGCTG  Raphanus sativus cv GSK3-1
FY452749       --> GTTGAAAGAAGATCCAGAGTTGAAACCTATACTTGATGAGATTGATGCTG  Raphanus sativus cv GSK3-1
EY940472       --> GTTGAAAGAAGATCCAGAGTTGAAACCTATACTTGATGAGATTGATGCTG  Raphanus sativus cv Early Scarlet Globe
EY933370       --> GTTGAAAGAAGATCCGGAGTTGAAACCTATACTTGATGAGATTGATGCTG  Raphanus sativus var. oleiformis
FD950215       --> GTTGAAAGAAGATCCAGAGTTGAAACCTATACTTGATGAGATTGATGCTG  Raphanus sativus cv Early Scarlet Globe

               651    -    701
UN14081        --> GTGGTCCTTCTGCCATGATGAAGTACTGGAATGATAAAGATGTGCTGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937034       <-- GTGGTCCTTCTGCCATGATGAAGTACTGGAATGATAAAGATGTGCTGAAA
EV529827       <-- GTGGTCCTTCTGCCATGATGAAGTACTGGAATGATAAAGATGTGCTGAAA
EY928859       <-- GTGGTCCTTCTGTCATGATGAAGTACTGGAATGATAAAGATGTGCTGAAA
FD945743       <-- GTGGTCCTTCTGCCATGATGAAGTACTGGAATGATAAAGATGTGCTGAAA
FD537972       <-- GTGGTCCTTCTGCCATGATGAAGTACTGGAATGATAAAGATGTGCTGAAA
FD983264       <-- ..................................................
FD961781       <-- ..................................................
FY449247       --> GTGGTCCTTCTGCCATGATGAAGTACTGGAATGATAAAGATGTGCTGAAA
FY452583       --> GTGGTCCTTCTGCCATGATGAAGTACTGGAATGATAAAGATGTGCTGAAA
EX895251       --> GTGGTCCTTCTGCCATGATGAAGTACTGGAATGATAAAGATGTGCTGAAA
EV524964       --> GTGGTCCTTCTGCCATGATGAAGTACTGGAATGATAAAGATGTGCTGAAA
FD541756       --> GTGGTCCTTCTGCCATGATGAAGTACTGGAATGATAAAGATGTGCTGAAA
FD966261       --> GTGGTCCTTCTGCCATGATGAAGTACTGGAATGATAAAGATGTGCTGAAA
FD536286       --> GTGGTCCTTCTGCCATGATGAAGTACTGGAATGATAAAGATGTGCTGAAA
FD941384       --> GTGGTCCTTCTGCCATGATGAAGTACTGGAATGATAAAGATGTGCTGAAA
FY448896       --> GTGGTCCTTCTGCCATGATGAAGTACTGGAATGATAAAGATGTGCTGAAA
FY447088       --> GTGGTCCTTCTGCCATGATGAAGTACTGGAATGATAAAGATGTGCTGAAA
FY429700       --> GTGGTCCTTCTGCCATGATGAAGTACTGGAATGATAAAGATGTGCTGAAA
FY430763       --> GTGGTCCTTCTGCCATGATGAAGTACTGGAATGATAAAGATGTGCTGAAA
FY454219       --> GTGGTCCTTCTGCCATGATGAAGTACTGGAATGATAAAGATGTGCTGAAA
FY446759       --> GTGGTCCTTCTGCCATGATGAAGTACTGGAATGATAAAGATGTGCTGAAA
FY441953       --> GTGGTCCTTCTGCCATGATGAAGTACTGGAATGATAAAGATGTGCTGAAA
FY438625       --> GTGGTCCTTCTGCCATGATGAAGTACTGGAATGATAAAGATGTGCTGAAA
FY431749       --> GTGGTCCTTCTGCCATGATGAAGTACTGGAATGATAAAGATGTGCTGAAA
FY450360       --> GTGGTCCTTCTGCCATGATGAAGTACTGGAATGATAAAGATGTGCTGAAA
FY438278       --> GTGGTCCTTCTGCCATGATGAAGTACTGGAATGATAAAGATGTGCTGAAA
FY452749       --> GTGGTCCTTCTGCCATGATGAAGTACTGGAATGATAAAGATGTGCTGAAA
EY940472       --> GTGGTCCTTCTGCCATGATGAAGTACTGGAATGATAAAGATGTGCTGAAA
EY933370       --> GTGGTCCTTCTGTCATGATGAAGTACTGGAATGATAAAGATGTGCTGAAA
FD950215       --> GTGGTCCTTCTGCCATGATGAAGTACTGGAATGATAAAGATGTGCTGAAA

               701    -    751
UN14081        --> AAGCTTGGTGAAGCAATGGGTATGCCTGTTGCTGGCTTGCCTGACCAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937034       <-- AAGCTTGGTGAAGCAATGGGTATGCCTGTTGCTGGCTTGCCTGACCAAAC  Raphanus sativus var. oleiformis
EV529827       <-- AAGCTTGGTGAAGCAATGGGTATGCCTGTTGCTGGCTTGCCTGACCAGAC  Raphanus raphanistrum subsp. maritimus
EY928859       <-- AAGCTTGGTGAAGCAATGGGTATGCCTGTTGCTGGCTTGCCTGACCAAAC  Raphanus sativus var. oleiformis
FD945743       <-- AAGCTTGGTGAAGCAATGGGTATGCCTGTTGCTGGCTTGCCTGACCAGAC  Raphanus sativus cv Early Scarlet Globe
FD537972       <-- AAGCTTGGTGAAGCAATGGGTATGCCTGTTGCTGGCTTGCCTGACCAAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD983264       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD961781       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FY449247       --> AAGCTTGGTGAAGCAATGGGTATGCCTGTTGCTGGCTTGCCTGACCAGAC  Raphanus sativus cv GSK3-1
FY452583       --> AAGCTTGGTGAAGCAATGGGTATGCCTGTTGCTGGCTTGCCTGACCAGAC  Raphanus sativus cv GSK3-1
EX895251       --> AAGCTTGGTGAAGCAATGGGTATGCCTGTTGCTGGCTTGCCTGACCAGAC  Raphanus sativus cv Early Scarlet Globe
EV524964       --> AAGCTTGGTGAAGCAATGGGTATGCCTGTTGCTGGCTTGCCTGACCAGAC  Raphanus raphanistrum subsp. maritimus
FD541756       --> AAGCTTGGTGAAGCAATGGGTATGCCTGTTGCTGGCTTGCCTGACCAAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966261       --> AAGCTTGATGAAGCAATGGGTATGCCTGTTGCTGGCTTGCCTGACCAGAC  Raphanus raphanistrum subsp. maritimus
FD536286       --> AAGCTTGGTGAAGCAATGGGTATGTCTGTTGCTGGCTTGCC.........  Raphanus raphanistrum subsp. maritimus
FD941384       --> AAGCTTGGTGAAGCAATGGGTATGCCTGTTGCTGGCTTGCCTG.......  Raphanus sativus var. oleiformis
FY448896       --> AAGCTTGGTGAAGCAATGGGTATGCCTGTTGCTGGCTTGCCTGACCAGAC  Raphanus sativus cv GSK3-1
FY447088       --> AAGCTTGGTGAAGCAATGGGTATGCCTGTTGCTGGCTTGCCTGACCAGAC  Raphanus sativus cv GSK3-1
FY429700       --> AAGCTTGGTGAAGCAATGGGTATGCCTGTTGCTGGCTTGCCTGACCAGAC  Raphanus sativus cv GSK3-1
FY430763       --> AAGCTTGGTGAAGCAATGGGTATGCCTGTTGCTGGCTTGCCTGACCAGAC  Raphanus sativus cv GSK3-1
FY454219       --> AAGCTTGGTGAAGCAATGGGTATGCCTGTTGCTGGCTTGCCTGACCAGAC  Raphanus sativus cv GSK3-1
FY446759       --> AAGCTTGGTGAAGCAATGGGTATGCCTGTTGCTGGCTTGCCTGACCAGAC  Raphanus sativus cv GSK3-1
FY441953       --> AAGCTTGGTGAAGCAATGGGTATGCCTGTTGCTGGCTTGCCTGACCAGAC  Raphanus sativus cv GSK3-1
FY438625       --> AAGCTTGGTGAAGCAATGGGTATGCCTGTTGCTGGCTTGCCTGACCAGAC  Raphanus sativus cv GSK3-1
FY431749       --> AAGCTTGGTGAAGCAATGGGTATGCCTGTTGCTGGCTTGCCTGACCAGAC  Raphanus sativus cv GSK3-1
FY450360       --> AAGCTTGGTGAAGCAATGGGTATGCCTGTTGCTGGCTTGCCTGACCAGAC  Raphanus sativus cv GSK3-1
FY438278       --> AAGCTTGGTGAAGCAATGGGTATGCCTGTTGCTGGCTTGCCTGACCAGAC  Raphanus sativus cv GSK3-1
FY452749       --> AAGCTTGGTGAAGCAATGGGTATGCCTGTTGCTGGCTTGCCTGACCAGAC  Raphanus sativus cv GSK3-1
EY940472       --> AAGCTTGGTGAAGCAATGGGTATGCCTGTTGCTGGCTTGCCTGACCAGAC  Raphanus sativus cv Early Scarlet Globe
EY933370       --> AAGCTTGGTGAAGCAATGGGTATGCCTGTTGCTGGCTTGCCTGACCAAAC  Raphanus sativus var. oleiformis
FD950215       --> AAGCTTGGTGAAGCAATGGGTATGCCTGTTGCTGGCTTGCCTGACCAGAC  Raphanus sativus cv Early Scarlet Globe

               751    -    801
UN14081        --> GCCTTCAGCTGAACCCGAGGTGGCTGAAGAAGAAGAAGAAGAGTCTATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937034       <-- TCCTTCAGCTGAACCCGAGGTGGCTGAAGAAGAAGAAGAAGAGTCTATTG  Raphanus sativus var. oleiformis
EV529827       <-- TCCTTCAGCTGAACCCGAGGTGGCTGAAGAAGAAGAAGAAGAGTCTATTG  Raphanus raphanistrum subsp. maritimus
EY928859       <-- TCCTTCAGCTGAACCCGAGGTGGCTGAAGAAGAAGAAGAAGAGTCTATTG  Raphanus sativus var. oleiformis
FD945743       <-- TCCTTCAGCTGAACCCGAGGTGGCTGAAGAAGAAGAAGAAGAGTCTATTG  Raphanus sativus cv Early Scarlet Globe
FD537972       <-- TCCTTCAGCTGAACCCGAGGTGGCTGAAGAAGAAGAAGAAGAGTCTATTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD983264       <-- .....................................GAAGAGTCTATTG  Raphanus raphanistrum subsp. landra
FD961781       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FY449247       --> GCCTTCAGCTGAACCCGAGGTGGCTGAAGAAGAAGAAGAAGAGTCTATTG  Raphanus sativus cv GSK3-1
FY452583       --> GCCTTCAGCTGAACCCGAGGTGGCTGAAGAAGAAGAAGAAGAGTCTATTG  Raphanus sativus cv GSK3-1
EX895251       --> TCCTTCAGCTGAACCCGAGtggc...........................  Raphanus sativus cv Early Scarlet Globe
EV524964       --> TCCTTCAGCTGAACCCGAG-TGGCTGAAGAAGAAGAAGAAGAGTCTATTG  Raphanus raphanistrum subsp. maritimus
FD541756       --> TCCTTCAGCTGAACCCGAGGTGGCTGAAGAAGAAGAAGAAGAGTCTATTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966261       --> TCCTTCAGCTGA......................................  Raphanus raphanistrum subsp. maritimus
FD536286       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD941384       --> ..................................................  Raphanus sativus var. oleiformis
FY448896       --> GCCTTCAGCTGAACCCGAAGTGGCTGAA......................  Raphanus sativus cv GSK3-1
FY447088       --> GCCTTCAGCTG.......................................  Raphanus sativus cv GSK3-1
FY429700       --> GCCTTCAGCTGAACCCGAGGTGGCTGAAGAAGAAGAAGAAGAGTCTATTG  Raphanus sativus cv GSK3-1
FY430763       --> GCCTTCAGCTGAACCCGAGGTGGCTGAAGAAGAAGAAGAAGAGTCTATTG  Raphanus sativus cv GSK3-1
FY454219       --> GCCTTCAGCTGAACCCGAGGTGGCTGAAGAAGAAGAAGAAGAGTCTATTG  Raphanus sativus cv GSK3-1
FY446759       --> GCCTTCAGCTGAACCCGAGGTGGCTGAAGAAGAAGAAGAAGAGTCTATTG  Raphanus sativus cv GSK3-1
FY441953       --> GCCTTCAGCTGAACCCGAGGTGGCTGAAGAAGAAGAAGAAGAGTCTATTG  Raphanus sativus cv GSK3-1
FY438625       --> GCCTTCAGCTGAACCCGAGGTGGCTGAAGAAGAAGAAGAAGAGTCTATTG  Raphanus sativus cv GSK3-1
FY431749       --> GCCTTCAGCTGAACCCGAGGTGGCTGAAGAAGAAGAAGAAGAGTCTATTG  Raphanus sativus cv GSK3-1
FY450360       --> GCCTTCAGCTGAACCCGAGGTGGCTGAAGAAGAAGAAGAAGAGTCTATTG  Raphanus sativus cv GSK3-1
FY438278       --> GCCTTCAGCTGAACCCGAGGTGGCTGAAGAAGAAGAAGAAGAGTCTATTG  Raphanus sativus cv GSK3-1
FY452749       --> GCCTTCAGCTGAACCCGAGGTGGCTGAAGAAGAAGAAGAAGAGTCTATTG  Raphanus sativus cv GSK3-1
EY940472       --> TCCTTCAGCTGAACCCGAGGTGGCTGAAGAAGAAGAAGAAGAGTCTATTG  Raphanus sativus cv Early Scarlet Globe
EY933370       --> TCCTTCAGCTGAACCCGAGGTGGCTGAAGAAGAAGAAGAAGAGTCTATTG  Raphanus sativus var. oleiformis
FD950215       --> TCCTTCAGCTGAACCCGAGGTGGCTGAAGAAGAAGAAGAAGAGTCTATTG  Raphanus sativus cv Early Scarlet Globe

               801    -    851
UN14081        --> TTCATCAAACGGCCAGTCTTGGTGATGTTGAGGGTTTGAAAACCGCTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937034       <-- TTCATCAAACGGCCAGTCTTGGTGATGTTGAGGGTTTGAAAACCGCTTTG
EV529827       <-- TTCATCAAACGGCCAGTCTTGGTGATGTTGAGGGTTTGAAAACCGCTTTG
EY928859       <-- TTCATCAAGCGGCCAGTCTTGGTGATGCTGAGGGTTTGAAAACCGCTTTG
FD945743       <-- TTCATCAAACGGCCAGTCTTGGTGATGTTGAGGGTTTGAAAACCGCTTTG
FD537972       <-- TTCATCAAACGGCCAGTCTTGGTGATGTTGAGGGTTTGAAAACCGCTTTG
FD983264       <-- TTCATCAAACGGCCAGTCTTGGTGATGTTGAGGGTTTGAAAACCGCTTTG
FD961781       <-- ..................................................
FY449247       --> TTCATCAAACGGCCAGTCTTGGTGATGTTGA...................
FY452583       --> TTCATCAAACGGCCAGTCTTGGTGATGTTGAGGGTTTGAAAACCGCTTTG
EX895251       --> ..................................................
EV524964       --> TTCATCAAACGGCCAGTCTTGGTGATGTTGAGGGTTTGAAAACCGCTTTG
FD541756       --> TTCATCAAACGGCCAGTCTTGGTGATGTT.....................
FD966261       --> ..................................................
FD536286       --> ..................................................
FD941384       --> ..................................................
FY448896       --> ..................................................
FY447088       --> ..................................................
FY429700       --> TTCATCAAACGGCCAGTCTTGGTGATGTTGAGGGTTTGAAAACCGCTTTG
FY430763       --> TTCATCAAACGGCCAGTCTTGGTGATGTTGAGGGTTTGAAAACCGCTTTG
FY454219       --> TTCATCAAACGGCCAGTCTTGGTGATGTTGAGGGTTTGAAAACCGCTTTG
FY446759       --> TTCATCAAACGGCCAGTCTTGGTG..........................
FY441953       --> TTCATCAAACGGCCAGTCTTGGTGATGTTGAGGGTTTGAAAACCGCTTTG
FY438625       --> TTCATCAAACGGCCAGTCTTGGTGATGTTGAGGGTTTGAAAACCGCTTTG
FY431749       --> TTCATCAAACGGCCAGTCTTGGTGATGTTGAGGGTTTGAAAACCGCTTTG
FY450360       --> TTCATCAAACGGCCAGTCTTGGTGATGTTGAGGGTTTGAAAACCGCTTTG
FY438278       --> TTCATCAAACGGCCAGTCTTGGTGATGTTGAGGGTTTGAAAACCGCTTTG
FY452749       --> TTCATCAAACGGCCAGTCTTGGTGATGTTGAGGGTTTGAAAACCGCTTTG
EY940472       --> TTCATCAAACGGCCAGTCTTGGTGATGTTGAGGGTTTGAAAACCGCTTTG
EY933370       --> TTCATCAAGCGGCCAGTCTTGGTGATGc......................
FD950215       --> TTCATCAAACGGCCAGTCTTGGTGATGTTGAGGGTTTGAAAACCGCTTTG

               851    -    901
UN14081        --> GAATCTGGTGGTAACAAAGATGAAGAAGATTCTGAAGGAAGGACAGCACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937034       <-- GAATCTGGTGGTAACAAAGATGAAGAAGATTCTGAAGGAAGGACAGCACT
EV529827       <-- GAATCTGGTGGTAACAAAGATGAAGAAGATTTTGAAGG--AGACAGCACT
EY928859       <-- GAATCTGGTGGTAACAAAGATGAAGAAGATTCTGAAGGAAGGACAGCACT
FD945743       <-- GAATCTGGTGGTAACAAAGATGAAGAAGATTTTGAAGGAAGGACAGCACT
FD537972       <-- GAATCTGGTGGTAACAAAGATGAAGAAGATTCTGAAGGAAGGACAGCACT
FD983264       <-- GAATCTGGTGGTAACAAAGATGAAGAAGATTCTGAAGGAAGGACAGCACT
FD961781       <-- ..................................................
FY449247       --> ..................................................
FY452583       --> GAATCTG...........................................
EX895251       --> ..................................................
EV524964       --> GAATCTGGTGGTAACAAAGATGAAGA-GATTCTGAAG--A-GACAGCACT
FD541756       --> ..................................................
FD966261       --> ..................................................
FD536286       --> ..................................................
FD941384       --> ..................................................
FY448896       --> ..................................................
FY447088       --> ..................................................
FY429700       --> GAATCTGGTGGTAACAAAGATGAAGAAGATTCTGAAGGAAGGACAGCACT
FY430763       --> GAATCTGGTGGTAACAAAGATGAAGAAGATTCTGAAGGAAGGACAGCACT
FY454219       --> GAATCTGGTGGTAACAAAGATGAAGAAGATTCTGAAGGAAGGACAGCACT
FY446759       --> ..................................................
FY441953       --> GAATCTGGTGGTAACAAAGATGAAGAAGATTCTGAAGGAAGGACAGCACT
FY438625       --> GAATCTGGTGGTAACAAAGATGAAGAAGATTCTGAAGGAAGGACAGCACT
FY431749       --> GAATCTGGTGGTAACAAAGATGAAGAAGATTCTGAAGGAAGGACAGCACT
FY450360       --> GAATCTGGTGGTAACAAAGATGAAGAAGATTCTGAAGGAAGGACAGCACT
FY438278       --> GAATCTGGTGGTAACAAAGATGAAGAAGATTCTGAAGGAAGGACAGCACT
FY452749       --> GAATCTGGTGGTAACAAAGATGAAGAAGATTCTGAAGGAAGGACAGCACT
EY940472       --> GAATCTGGTGGTAACAAA................................
EY933370       --> ..................................................
FD950215       --> GAATCTGGTGGTAACAAAGATGAAGAAGATTCTGAAGGAAGGACAGCACT

               901    -    951
UN14081        --> GCATTTTGCGTGTGGATACGGCGAGTTAAAATGTGCTCAAGTTCTTATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937034       <-- GCATTTTGCGTGTGGATACGGCGAGTTGAAATGTGCTCAAGTTCTTATCG  Raphanus sativus var. oleiformis
EV529827       <-- GCATTTTGCGTGTTGATACGGCGAGTTGAAATGTGCTCAAGTTCTTATCG  Raphanus raphanistrum subsp. maritimus
EY928859       <-- GCATTTTGCGTGTGGATACGGCGAGTTGAAATGTGCTCAAGTTCTTATCG  Raphanus sativus var. oleiformis
FD945743       <-- GCATTTTGCGTGTGGATACGGCGAGTTGAAATGTGCTCAAGTTTTCATCG  Raphanus sativus cv Early Scarlet Globe
FD537972       <-- GCATTTTGCGTGTGGATACGGCGAGTTGAAATGTGCTCAAGTTCTTATCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD983264       <-- GCATTTTGCGTGTGGATACGGCGAGTTGAAATGTGCTCAAGTTCTTATCG  Raphanus raphanistrum subsp. landra
FD961781       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FY449247       --> ..................................................  Raphanus sativus cv GSK3-1
FY452583       --> ..................................................  Raphanus sativus cv GSK3-1
EX895251       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV524964       --> GCATTTTGCGTGTTGATACG-CGAGTGAAA-TGTGCTC............  Raphanus raphanistrum subsp. maritimus
FD541756       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966261       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD536286       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD941384       --> ..................................................  Raphanus sativus var. oleiformis
FY448896       --> ..................................................  Raphanus sativus cv GSK3-1
FY447088       --> ..................................................  Raphanus sativus cv GSK3-1
FY429700       --> GCATTTTGCGTGTGGATACGGCGAGTTAAAATGTGCTCAAGTTCTTATCG  Raphanus sativus cv GSK3-1
FY430763       --> GCATTTTGCGTGTGGATACGGCGAGTTAAAATGTGCTCAAGTTCTTATCG  Raphanus sativus cv GSK3-1
FY454219       --> GCATTTTGCGTGTGGATACGGCGAGTTAAAATGTGCTCAAGTTCTTATCG  Raphanus sativus cv GSK3-1
FY446759       --> ..................................................  Raphanus sativus cv GSK3-1
FY441953       --> GCATTTTGCGTGTGGATACGGCGAGTTAAAATGTGCTCAAGTTCTTATCG  Raphanus sativus cv GSK3-1
FY438625       --> GCATTTTGCGTGTGGATACGGCGAGTTAAAATGTGCTCAAGTTCTTATCG  Raphanus sativus cv GSK3-1
FY431749       --> GCATTTTGCGTGTGGATACGGCGAGTTAAAATGTGCTCAAGTTCTTATCG  Raphanus sativus cv GSK3-1
FY450360       --> GCATTTTGCGTGTGGATACGGCGAGTTAAAATGTGCTCAAGTTCTTATCG  Raphanus sativus cv GSK3-1
FY438278       --> GCATTTTGCGTGTGGATACGGCGAGTTAAAATGTGCTCAAGTTCTTATCG  Raphanus sativus cv GSK3-1
FY452749       --> GCATTTTGCGTGTGGATACGGCGAGTTAAAATGTGCTCAAGTTCTTATCG  Raphanus sativus cv GSK3-1
EY940472       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY933370       --> ..................................................  Raphanus sativus var. oleiformis
FD950215       --> GCATTTTGCGTGTGGATACGGCGAGTTGAAATGTGCTCAAGTTCTCATCG  Raphanus sativus cv Early Scarlet Globe

               951    -   1001
UN14081        --> ATGCTGGAGCAAGTGTTAACGCTGTTGACAAAAACAAGAACACACCTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937034       <-- ATGCTGGAGCAAGTGTTAACGCTGTTGACAAAAACAAGAACACACCTCTG
EV529827       <-- ATGCTGGAGCAAGTGTTAACGCTGTTGACAAAAACAAGAACACACCTCTG
EY928859       <-- ATGCTGGAGCAAGTGTTAACGCTGTTGACAAAAACAAGAACACACCTCTG
FD945743       <-- ATGCTGGAGCAAGTGTTAACGCTGTTGACAAAAACAAGAACACACCTTTG
FD537972       <-- ATGCTGGAGCAAGTGTTAACGCTGTTGACAAAAACAAGAACACACCTCTG
FD983264       <-- ATGCTGGAGCAAGTGTTAACGCTGTTGACAAAAACAAGAACACACCTCTG
FD961781       <-- ...............................AAACAAGAACACACCTCTG
FY449247       --> ..................................................
FY452583       --> ..................................................
EX895251       --> ..................................................
EV524964       --> ..................................................
FD541756       --> ..................................................
FD966261       --> ..................................................
FD536286       --> ..................................................
FD941384       --> ..................................................
FY448896       --> ..................................................
FY447088       --> ..................................................
FY429700       --> ATGCTGGA..........................................
FY430763       --> ATGCTGGAGCAAGTGTTAACGCTGT.........................
FY454219       --> ATGCTGGAGCAAGTGTTAACG.............................
FY446759       --> ..................................................
FY441953       --> ATGCTGGAGCAAGTGTTAACG.............................
FY438625       --> ATGCTGGAGCAAGTGTTAACGCTGTTGACAAAAACAAGAACACACCTCTG
FY431749       --> ATGCTGGAGCAAGTGTTAA...............................
FY450360       --> ATGCTGGAGCAAGTG...................................
FY438278       --> ATGCTGGAGCAAGTGTTAACGCTGT.........................
FY452749       --> ATGCTGGAGCAAGTGTTAACGCTGTTGACAAAAACA-GAACACACCTCTG
EY940472       --> ..................................................
EY933370       --> ..................................................
FD950215       --> ATGCTGGAGCAAGTGTTAACGCTGTTGACAAAAACAAGAACACACCTCTG

               1001   -   1051
UN14081        --> CATTACGCTGCTGGTTACGGGAGGAAAGAGTGTGTTAGCCTTCTCCTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937034       <-- CATTACGCTGCTGGTTATGGGAGGAAAGAGTGTGTTAGCCTTCTCCTTGA
EV529827       <-- CATTACGCTGCTGGTTACGGGAGGAAAGAGTGTGTTAGCCTTCTCCTTGA
EY928859       <-- CATTACGCTGCTGGTTATGGGAGGAAAGAGTGTGTTAGCCTTCTCCTTGA
FD945743       <-- CATTACGCTGCTGGTTACGGGAGGAAAGAGTGTGTTAGCCTTCTCCTTGA
FD537972       <-- CATTACGCTGCTGGTTACGGGAGGAAAGAGTGTGTTAGCCTTCTCCTTGA
FD983264       <-- CATTACGCTGCTGGTTACGGGAGGAAAGAGTGTGTTAGCCTTCTCCTTGA
FD961781       <-- CATTACGCTGCTGGTTACGGGAGGAAAGAGTGTGTTAGCTTTCTCCTTGA
FY449247       --> ..................................................
FY452583       --> ..................................................
EX895251       --> ..................................................
EV524964       --> ..................................................
FD541756       --> ..................................................
FD966261       --> ..................................................
FD536286       --> ..................................................
FD941384       --> ..................................................
FY448896       --> ..................................................
FY447088       --> ..................................................
FY429700       --> ..................................................
FY430763       --> ..................................................
FY454219       --> ..................................................
FY446759       --> ..................................................
FY441953       --> ..................................................
FY438625       --> CATT..............................................
FY431749       --> ..................................................
FY450360       --> ..................................................
FY438278       --> ..................................................
FY452749       --> CATTACGCTGCTGG....................................
EY940472       --> ..................................................
EY933370       --> ..................................................
FD950215       --> CATTACGCTGCTGGTTACGGGAGGAAAGAGTGTGTTAGCCTTCTCCTTGA

               1051   -   1101
UN14081        --> GAATGGTGCAGCAGTGACTCTGCAAAACCTAGACGAGAAGACACCCATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937034       <-- GAATGGTGCAGCAGTGACTCTGCAAAACCTAGACGAGAAAACACCCATTG
EV529827       <-- GAATGGTGCAGCAGTGACTCTGCAAAACCTAGACGAGAAGACACCCATTG
EY928859       <-- GAATGGTGCAGCAGTGACTCTGCAAAACCTAGACGAGAAAACACCCATTG
FD945743       <-- GAATGGTGCAGCAGCGACTCTGCAAAACCTAGACGAGAAGACACCCATTG
FD537972       <-- GAATGGTGCAGCAGTGACTCTGCAAAACCTAGACGAGAAGACACCCATTG
FD983264       <-- GAATGGTGCAGCAGTGACTCTGCAAAACCTAGACGAGAAGACACCCATTG
FD961781       <-- GAATGGTGCAGCAGTGACTTTGCAAAACCTAGACGAGAAGACACCCATTG
FY449247       --> ..................................................
FY452583       --> ..................................................
EX895251       --> ..................................................
EV524964       --> ..................................................
FD541756       --> ..................................................
FD966261       --> ..................................................
FD536286       --> ..................................................
FD941384       --> ..................................................
FY448896       --> ..................................................
FY447088       --> ..................................................
FY429700       --> ..................................................
FY430763       --> ..................................................
FY454219       --> ..................................................
FY446759       --> ..................................................
FY441953       --> ..................................................
FY438625       --> ..................................................
FY431749       --> ..................................................
FY450360       --> ..................................................
FY438278       --> ..................................................
FY452749       --> ..................................................
EY940472       --> ..................................................
EY933370       --> ..................................................
FD950215       --> GAATGGTGCAGCAGCGACTCTGCAAAACCTAGACGAGAAGACACCCATTG

               1101   -   1151
UN14081        --> ATGTGGCTAAGCTCAACAACCAGCTCGAGGTGGTGAAGCTGCTCGAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937034       <-- ATGTGGCTAAGCTCAACAACCAGCTCGAGGTGGTGAAGCTGCTCGAAAAA
EV529827       <-- ATGTGTCTAAGCTCAACAACCAGCTCGAGGTGGTGAAGCTGCTCGAAAAA
EY928859       <-- ATGTGGCTAAGCTCAACAACCAGCTCGAGGTGGTGTAGCTGCTCGAAAAA
FD945743       <-- ATGTGGCTAAGCTCAACAACCAGCTCGAGGTGGTGAAGCTGCTCGAAAAA
FD537972       <-- ATGTGGCTAAGCTCAACAACCAGCTCGAGGTGGTGAAGCTGCTCGAAAAA
FD983264       <-- ATGTGGCTAAGCTCAACAACCAGCTCGAGGTGGTGAAGCTGCTCGAAAAA
FD961781       <-- ATGTGGCTAAGCTCAACAACCAGCTCGAGGTGGTGAAGCTGCTCGAAAAA
FY449247       --> ..................................................
FY452583       --> ..................................................
EX895251       --> ..................................................
EV524964       --> ..................................................
FD541756       --> ..................................................
FD966261       --> ..................................................
FD536286       --> ..................................................
FD941384       --> ..................................................
FY448896       --> ..................................................
FY447088       --> ..................................................
FY429700       --> ..................................................
FY430763       --> ..................................................
FY454219       --> ..................................................
FY446759       --> ..................................................
FY441953       --> ..................................................
FY438625       --> ..................................................
FY431749       --> ..................................................
FY450360       --> ..................................................
FY438278       --> ..................................................
FY452749       --> ..................................................
EY940472       --> ..................................................
EY933370       --> ..................................................
FD950215       --> ATGTGGCTAAGCTCAACAACCAGCTCGAGGTGGTGAAGCTGCTCGAAAAA

               1151   -   1201
UN14081        --> GATGCTTTCCTTTGAGCGTGTGTCAAAAGAAGCTCTAAGATCATAATTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937034       <-- GATGCTTTCCTTTGAGTGTGTGTCAAAAGAAGCTCTAAGATCATAATTGT
EV529827       <-- GATGCTTTCCTTTGAGCGTGTGTCAAAAGAAGCTCTAAGATCATAATTGT
EY928859       <-- GATGCTTTCCTTTGAGTGTGTGTCAAAAGAAGCTCTAAGATCGTAATTGT
FD945743       <-- GATGCTTTCCTTTGAGCGTGTGTCAAAAGAAGCTCTAAGATCATAATTGT
FD537972       <-- GATGCTTTCCTTTGAGCGTGTGTCAAAAGAAGCTCTAAGATCATAATTGT
FD983264       <-- GATGCTTTCCTTTGAGCGTGTGTCAAAAGAAGCTCTAAGATCATAATTGT
FD961781       <-- GATGCTTTCCTTTGAGCGTGTGTCAAAAGAAGCTCTAAGATCATAATTGT
FY449247       --> ..................................................
FY452583       --> ..................................................
EX895251       --> ..................................................
EV524964       --> ..................................................
FD541756       --> ..................................................
FD966261       --> ..................................................
FD536286       --> ..................................................
FD941384       --> ..................................................
FY448896       --> ..................................................
FY447088       --> ..................................................
FY429700       --> ..................................................
FY430763       --> ..................................................
FY454219       --> ..................................................
FY446759       --> ..................................................
FY441953       --> ..................................................
FY438625       --> ..................................................
FY431749       --> ..................................................
FY450360       --> ..................................................
FY438278       --> ..................................................
FY452749       --> ..................................................
EY940472       --> ..................................................
EY933370       --> ..................................................
FD950215       --> ..................................................

               1201   -   1251
UN14081        --> CTTTGAATGATTTGTCTTGTGTTGGTGTCTCGAAGATGTTGACAGACTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937034       <-- CTTTGAATGATTTGTCTTGTATT-TTATCTCGAAGATGTTGACAGACTTT  Raphanus sativus var. oleiformis
EV529827       <-- CTTTGAATGATTTGTCTTGTGTTGGTGTCTCGAAGATGTTGACAGACTTT  Raphanus raphanistrum subsp. maritimus
EY928859       <-- CTTTGAATGATTTGTCTTGTATT-TTATCTCGAAGATGTTGACAGACTTT  Raphanus sativus var. oleiformis
FD945743       <-- CTTTGAATGATTTGTCTTGTGTTGGTGTCTCGAAGATGTTGACAGACTTT  Raphanus sativus cv Early Scarlet Globe
FD537972       <-- CTTTGAATGATTTGTCTTGTGTT-TTATCTCGAAGATGTTGACAGACTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD983264       <-- CTTTGAATGATTTGTCTTGTGTTGGTGTCTCGAAGATGTTGACAGACTTT  Raphanus raphanistrum subsp. landra
FD961781       <-- CTTTGAATGATTTGTCTTGTGTTGGTGTCTCGAAGATGTTGACAGACTTT  Raphanus raphanistrum subsp. maritimus
FY449247       --> ..................................................  Raphanus sativus cv GSK3-1
FY452583       --> ..................................................  Raphanus sativus cv GSK3-1
EX895251       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV524964       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD541756       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966261       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD536286       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD941384       --> ..................................................  Raphanus sativus var. oleiformis
FY448896       --> ..................................................  Raphanus sativus cv GSK3-1
FY447088       --> ..................................................  Raphanus sativus cv GSK3-1
FY429700       --> ..................................................  Raphanus sativus cv GSK3-1
FY430763       --> ..................................................  Raphanus sativus cv GSK3-1
FY454219       --> ..................................................  Raphanus sativus cv GSK3-1
FY446759       --> ..................................................  Raphanus sativus cv GSK3-1
FY441953       --> ..................................................  Raphanus sativus cv GSK3-1
FY438625       --> ..................................................  Raphanus sativus cv GSK3-1
FY431749       --> ..................................................  Raphanus sativus cv GSK3-1
FY450360       --> ..................................................  Raphanus sativus cv GSK3-1
FY438278       --> ..................................................  Raphanus sativus cv GSK3-1
FY452749       --> ..................................................  Raphanus sativus cv GSK3-1
EY940472       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY933370       --> ..................................................  Raphanus sativus var. oleiformis
FD950215       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               1251   -   1301
UN14081        --> TCGTATGACCTCTTTCAGTTACATTTGTGTTTTATTAGTCTCAAATTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937034       <-- TCGTATGACCTCTTTCAGTTACATTTGTGTTTTATTAGTCTCAAATTTGT
EV529827       <-- TCGTATGACCTCTTTCAGTTACATTTGTGTTTTATTAGTCTCAAATTTGT
EY928859       <-- TCGTATGACCTCTTTCAGTTACATTTGTGTTTTATTAGTCTCAAATTTGT
FD945743       <-- TCGTATGACCTCTTTCAGTTACATTTGTGTTTTATTAGTCTCAAATTTGT
FD537972       <-- TCGTATGACCTCTTTCAGTTACATTTGTGTTTTATTAGTCTCAAATTTGT
FD983264       <-- TCGTATGACCTCTTTCAGTTACATTTGTGTTTTATTAGTCTCAAATTTGT
FD961781       <-- TCGTATGACCTCTTTCAGTTACATTTGTGTTTTATTAGTCTCAAATTTGT
FY449247       --> ..................................................
FY452583       --> ..................................................
EX895251       --> ..................................................
EV524964       --> ..................................................
FD541756       --> ..................................................
FD966261       --> ..................................................
FD536286       --> ..................................................
FD941384       --> ..................................................
FY448896       --> ..................................................
FY447088       --> ..................................................
FY429700       --> ..................................................
FY430763       --> ..................................................
FY454219       --> ..................................................
FY446759       --> ..................................................
FY441953       --> ..................................................
FY438625       --> ..................................................
FY431749       --> ..................................................
FY450360       --> ..................................................
FY438278       --> ..................................................
FY452749       --> ..................................................
EY940472       --> ..................................................
EY933370       --> ..................................................
FD950215       --> ..................................................

               1301   -   1351
UN14081        --> GATGTTTTTGATTTTCATTTAAAGTCAATAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937034       <-- G................................
EV529827       <-- GATGTTTTTGATTTTCATTTAAAGTCAATAAAG
EY928859       <-- GATGTTTTTGATTTTCATTTAAAGTC.......
FD945743       <-- GATG.............................
FD537972       <-- GATGTTTTTGATTTTCATTTAAAGTC.......
FD983264       <-- GATGTTTTTGATTTTCATTTAAAGTC.......
FD961781       <-- GATGTTTTTGATTTTCATTTAAAGTC.......
FY449247       --> .................................
FY452583       --> .................................
EX895251       --> .................................
EV524964       --> .................................
FD541756       --> .................................
FD966261       --> .................................
FD536286       --> .................................
FD941384       --> .................................
FY448896       --> .................................
FY447088       --> .................................
FY429700       --> .................................
FY430763       --> .................................
FY454219       --> .................................
FY446759       --> .................................
FY441953       --> .................................
FY438625       --> .................................
FY431749       --> .................................
FY450360       --> .................................
FY438278       --> .................................
FY452749       --> .................................
EY940472       --> .................................
EY933370       --> .................................
FD950215       --> .................................