1      -     51
UN14095        --> GGTTAAGAGGCAAAATTCTTTTTGTCCGCTTTAGAGTCGTCATACAAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524480       <-- .........GCAAAATTCTCTTTGTCCGCTT-AGAGTCGTCATACAAATC
EW725300       <-- ......agaGCAAAAT-CTTTT-GTCCGCTT-AGAGTAGTCATACAAATC
FD541569       <-- ..........gcAAATTCTTTT-GTCCGCTT-AGAGTCGTCATACAAATC
FD535594       <-- .............AATTCTTTT-GTCCGCTT-AGAGTCGTCATACAAATC
EX762160       <-- ................atcTTTTGTCCGCTT-AGAGTCGTCATACAAATC
FD978738       <-- ...................................GTCGTCATACAAATC
EV526873       <-- ..................................................
EV527667       <-- ..................................................
EW731976       <-- ..................................................
EY939038       <-- ..................................................
EX764169       <-- ..................................................
EY915175       <-- ..................................................
EY922806       <-- ..................................................
EY946803       <-- ..................................................
FD533093       <-- ..................................................
FD986484       <-- ..................................................
EY914846       <-- ..................................................
FD541790       <-- ..................................................
FD549027       <-- ..................................................
FD537820       --> GGTTAAGAGGCAAAATTCTTTTTGTCCGCTTTAGAGTCGTCATACAAATC
EX766495       --> ....AAGAGGCAAAATTCTTTTTGTCCGCTTTAGAGTCGTCATACAAATC
FD529374       --> ....AAGAGGCAAAATTCTTTTTGTCCGCTTTAGAGTCGTCATACAAATC
EV529467       --> ...........AAAATTCTCTTTGTCCGCTTTAGAGTCGTCATACAAATC
FD545128       --> ........................cCCGCTTTAGAGTAGTCATACAAATC
EY918700       --> ...........................................gCAAATC
EY942826       --> ..................................................
EY935053       --> ..................................................
EX768145       --> ..................................................
FD982734       --> ..................................................
EV531856       --> ..................................................
EW729951       --> ..................................................

               51     -    101
UN14095        --> CGG-ACATGCACTGCCAAATGGGTTTATCGTCATTGTCTCATTGGGTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524480       <-- CGGGACATGCACTGCCAAATGGGTTTATCGTCATTGTCTCATTGGGTCTC  Raphanus raphanistrum subsp. maritimus
EW725300       <-- CGG-ACATGCACTGCCAAATGGGTTTATCGTCAT-GTCTCATTGGGTCTC  Raphanus sativus cv Early Scarlet Globe
FD541569       <-- GGG-ACATGCACTGCCAAGTGGGTTTATCGTCAT-GTCTCATTGGGTCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD535594       <-- CGG-ACATGCACTGCCAAATGGGTTTATCGTCATTGTCTCATTGGGTCTC  Raphanus raphanistrum subsp. maritimus
EX762160       <-- -GG-ACATGCACTGCCAAATGG-TTTATCGTCATTGTCTCATTGG-TCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD978738       <-- CGGGACATGCACTGCCAAATGGGTTTATCGTCATTGTCTCATTGGGTCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV526873       <-- .......TGCACTGCCAAATGGGTTTATCGTCATTGTCTCATTGGGTCTC  Raphanus raphanistrum subsp. maritimus
EV527667       <-- .......TGCACTGCCAAATGGGTTTATCGTCATTGTCTCATTGGGTCTC  Raphanus raphanistrum subsp. maritimus
EW731976       <-- ..........ACTGCCAAATGGGTTTATCGTCAT-GTCTCATTGGGTCTC  Raphanus sativus cv Rat-Tail Radish #3870
EY939038       <-- ..........gCTGCCAAATGG-TTTATCGTCAT-GTCTCATTGG-TCTC  Raphanus sativus cv Early Scarlet Globe
EX764169       <-- .............GCCAAATGGGTTTATCGTCAT-GTCTCATTGGGTCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915175       <-- ...............CAAATGGGTTTATCGTCATTGTCTCATTGGGTCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922806       <-- ...............CAAATGGGTTTATCGTCATTGTCTCATTGGGTCTC  Raphanus raphanistrum subsp. landra
EY946803       <-- ............................CGTCATTGTCTCATTGGGTCTC  Raphanus sativus cv Rat-Tail Radish #3870
FD533093       <-- .................................................C  Raphanus raphanistrum subsp. maritimus
FD986484       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY914846       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541790       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549027       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537820       --> GGG-ACATGCACTGCCAAGTGGGTTTATCGTCATTGTCTCATTGGGTCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766495       --> CGG-ACATGCACTGCCAAATGGGTTTATCGTCATTGTCTCATTGGGTCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD529374       --> CGG-ACATGCACTGCCAAATGGGTTTATCGTCATTGTCTCATTGGGTCTC  Raphanus raphanistrum subsp. maritimus
EV529467       --> CGG-ACATGCACTGCCAAATGGGTTTATCGTCATTGTCTCATTGGGTCTC  Raphanus raphanistrum subsp. maritimus
FD545128       --> CGG-ACATGCACTGCCAAATGGGTTTATCGTCATTGTCTCATTGGGTCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY918700       --> CGG-ACATGCACTGCCAAATGGGTTTATCGTCATTGTCTCATTGGGTCTC  Raphanus raphanistrum subsp. landra
EY942826       --> ........GCACTGCCAAATGGGTTTATCGTCATTGTCTCATTGGGTCTC  Raphanus sativus cv Rat-Tail Radish #3870
EY935053       --> ..........gCTGCCAAATGGGTTTATCGTCATTGTCTCATTGGGTCTC  Raphanus sativus cv Early Scarlet Globe
EX768145       --> .............GCCAAATGGGTTTATCGTCATTGTCTCATTGGGTCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982734       --> ..................................................  Raphanus raphanistrum subsp. landra
EV531856       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW729951       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               101    -    151
UN14095        --> CAATGAATCTCAACAGCTGAGTGTACTTATTAT---CACAAAATCACAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524480       <-- CAATGAATCTCAACAGCTGAGTGTACTTATTAT---CACAAAATCACAGC  Raphanus raphanistrum subsp. maritimus
EW725300       <-- AAATGAATCTCAACAGCTGAGTGTACTTATTAT---CACAAAATCACAGC  Raphanus sativus cv Early Scarlet Globe
FD541569       <-- CAATGAATCTCAACAGCTGAGTGTACTTATTAT---CACAAAATCACAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD535594       <-- CAATGAATCTCAACAGCTGAGTGTACTTATTAT---CACAAAATCACAGC  Raphanus raphanistrum subsp. maritimus
EX762160       <-- AAATGAATCTCAACAGCTGAGTGTACTTATTAT---CACAAAATCACAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD978738       <-- CAATGAATCTCAACAGCTGAGTGTACTTATTAT---CACAAAATCACAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV526873       <-- CAATGAATCTCAACAGCCGAGTGTACTTATTAT---CACAAAATCACAGT  Raphanus raphanistrum subsp. maritimus
EV527667       <-- CAATGAATCTCAACAGCTGAGTGTACTTATTAT---CACAAAATCACAGC  Raphanus raphanistrum subsp. maritimus
EW731976       <-- AAATGAATCTCAACAGCTGAGTGTACTTATTAT---CACAAAATCACAGC  Raphanus sativus cv Rat-Tail Radish #3870
EY939038       <-- AAATGAATCTCAACAGCTGAGTGTACTTATTAT---CACAAAATCACAGC  Raphanus sativus cv Early Scarlet Globe
EX764169       <-- CAATGAATCTCAACAGCCGAGTGTACTTATTAT---CACAAAATCACAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915175       <-- CAATGAATCTCAACAGCTGAGTGTACTTATTAT---CACAAAATCACAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922806       <-- CAATGAATCTCAACAGCCGAGTGTACTTATTAT---CACAAAATCACAGT  Raphanus raphanistrum subsp. landra
EY946803       <-- AAATGAATCTCAACAGCTGAGTGTACTTATTAT---CACAAAATCACAGC  Raphanus sativus cv Rat-Tail Radish #3870
FD533093       <-- CAATGAATCTCAACAGCCGAGTGTACTTATTAT---CACAAAATCACAGT  Raphanus raphanistrum subsp. maritimus
FD986484       <-- ....GAATCTCAACAGCTGAGTGTACTTATTATTATCACAAAATCACAGC  Raphanus raphanistrum subsp. landra
EY914846       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541790       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549027       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537820       --> CAATGAATCTCAACAGCTGAGTGTACTTATTAT---CACAAAATCACAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766495       --> AAATGAATCTCAACAGCTGAGTGTACTTATTAT---CACAAAATCACAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD529374       --> CAATGAATCTCAACAGCCGAGTGTACTTATTAT---CACAAAATCACAGT  Raphanus raphanistrum subsp. maritimus
EV529467       --> CAATGAATCTCAACAGCTGAGTGTACTTATTAT---CACAAAATCACAGC  Raphanus raphanistrum subsp. maritimus
FD545128       --> CAATGAATCTCAACAGCCGAGTGTACTTATTAT---CACAAAATCGCAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY918700       --> CAATGAATCTCAACAGCCGAGTGTACTTATTAT---CACAAAATCACAGT  Raphanus raphanistrum subsp. landra
EY942826       --> AAATGAATCTCAACAGCTGAGTGTACTTATTAT---CACAAAATCACAGC  Raphanus sativus cv Rat-Tail Radish #3870
EY935053       --> AAATGAATCTCAACAGCTGAGTGTACTTATTAT---CACAAAATCACAGC  Raphanus sativus cv Early Scarlet Globe
EX768145       --> CAATGAATCTCAACAGCCGAGTGTACTTATTAT---CACAAAATCACAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982734       --> ....GAATCTCAACAGCTGAGTGTACTTATTATTATCACAAAATCACAGC  Raphanus raphanistrum subsp. landra
EV531856       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW729951       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               151    -    201
UN14095        --> AAAAGAAAGAGAGAAAAATGAGAAAGAAAAGTGAATGTATGTTTCACAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524480       <-- AAAAGAAAGAGAGAGAAATGAGAAAGAAAAGTGAATGTATGTTTCACAGG
EW725300       <-- AAAAGAAAGAGAGAAAAATGAGAAAGAAAAGTGAATGTATGTTTCACAGG
FD541569       <-- AAAAGAAAGAGAGAAAAATGAGAAAGAAAAGTGAATGTATGTTTCACAGG
FD535594       <-- AAAAGAAAGAGAGAGAAATGAGAAAGAAAAGTGAATGTATGTTTCACAGG
EX762160       <-- AAAAGAAAGAGAGAAAAATGAGAAAGAAAAGTGAATGTATGTTTCACAGG
FD978738       <-- AAAAGAAAGAGAGAAAAATGAGAAAGAAAAGTGAATGTATGTTTCACAGG
EV526873       <-- AAAAGAAAGAGAGAAAAATGAGAAAGAAAAGTGAATGTATGTTTCACAGG
EV527667       <-- AAAAGAAAGAGAGAGAAATGAGAAAGAAAAGTGAATGTATGTTTCACAGG
EW731976       <-- AAAAGAAAGAGAGAAAAATGAGAAAGAAAAGTGAATGTATGTTTCACAGG
EY939038       <-- AAAAGAAAGAGAGAAAAATGAGAAAGAAAAGTGAATGTATGTTTCACAGG
EX764169       <-- AAAAGAAAGAGAGAAAAATGAGAAAGAAAAGTGAATGTATGTTTCACAGG
EY915175       <-- AAAAGAAAGAGAGAAAAATGAGAAAGAAAAGTGAATGTATGTTTCACAGG
EY922806       <-- AAAAGAAAGAGAGAAAAATGAGAAAGAAAAGT-AATGTATGTTTCACAGG
EY946803       <-- AAAAGAAAGAGAGAAAAATGAGAAAGAAAAGTGAATGTATGTTTCACAGG
FD533093       <-- AAAAGAAAGAGAGAAAAATGAGAAAGAAAAGTGAATGTATGTTTCACAGG
FD986484       <-- AAAAGAAAGAGAGAAAAATGAGAAAGAAAAGTGAATGTATGTTTCACAGG
EY914846       <-- ..................................................
FD541790       <-- ..................................................
FD549027       <-- ..................................................
FD537820       --> AAAAGAAAGAGAGAAAAATGAGAAAGAAAAGTGAATGTATGTTTCACAGG
EX766495       --> AAAAGAAAGAGAGAAAAATGAGAAAGAAAAGTGAATGTATGTTTCACAGG
FD529374       --> AAAAGAAAGAAAGAAAAATGAGAAAGAAAAGTGAATGTATGTTTCACAGG
EV529467       --> AAAAGAAAGAGAGAGAAATGAGAAAGAAAAGTGAATGTATGTTTCACAGG
FD545128       --> AAAAGAAAGAGAGAAAAATGAGAAAGAAAAGTGAATGTATGTTTCACAGG
EY918700       --> AAAAGAAAGAGAGAAAAATGAGAAAGAAAAGT-AATGTATGTTTCACAGG
EY942826       --> AAAAGAAAGAGAGAAAAATGAGAAAGAAAAGTGAATGTATGTTTCACAGG
EY935053       --> AAAAGAAAGAGAGAAAAATGAGAAAGAAAAGTGAATGTATGTTTCACAGG
EX768145       --> AAAAGAAAGAGAGAAAAATGAGAAAGAAAAGTGAATGTATGTTTCACAGG
FD982734       --> AAAAGAAAGAGAGAAAAATGAGAAAGAAAAGTGAATGTATGTTTCACAGG
EV531856       --> ..........................................TTCACAGG
EW729951       --> ..................................................

               201    -    251
UN14095        --> CCGAAGATACAAGAAGCAATGATCAGTATCCCCAGTAGTCGTTACGGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524480       <-- CCGAAGATACAAGAAGCAATGATCAGTATCCCCAGTAGTCGTTACGGATT
EW725300       <-- CCGAAGATACAAGAAGCAATGATCAGTATCCCCAGTAGTCGTTACGGATT
FD541569       <-- CCGAAGATACAAGAAGCAATGATCAGTATCCCAAGTAGTCGTTACGGATT
FD535594       <-- CCGAAGATACAAGAAGCAATGATCAGTATCCCCAGTAGTCGTTACGGATT
EX762160       <-- CCGAAGATATAAGAAGCAATGATCAGTATCCCCAGTAGTCGTTACGGATT
FD978738       <-- CCGAAGATACAAGAAGCAATGATCAGTATCCCCAGTAGTCGTTACGGATT
EV526873       <-- CCGAAGATACAAGAAGCAATGATCAGTATCCCCAGTAGTCGTTACGGATT
EV527667       <-- CCGAAGATACAAGAAGCAATGATCAGTATCCCCAGTAGTCGTTACGGATT
EW731976       <-- CCGAAGATACAAGAAGCAATGATCAGTATCCCCAGTAGTCGTTACGGATT
EY939038       <-- CCGAAGATACAAGAAGCAATGATCAGTATCCCCAGTAGTCGTTACGGATT
EX764169       <-- CCGAAGATACAAGAAGCAATGATCAGTATCCCCAGTAGTCGTTACGGATT
EY915175       <-- CCGAAGATACAAGAAGCAATGATCAGTATCCCCAGTAGTCGTTACGGATT
EY922806       <-- CCGAAGATACAAGAAACAATGATCAGTATCCCCAGTAGTCGTTACGGATT
EY946803       <-- CCGAAGATACAAGAAGCAATGATCAGTATCCCCAGTAGTCGTTACGGATT
FD533093       <-- CCGAAGATACAAGAAGCAATGATCAGTATCCCCGGTAGTCGTTACGGATT
FD986484       <-- CCGAAGATACAAGAAGCAATGATCAGTATCCCCAGTAGTCGTTACGGATT
EY914846       <-- .....GATACAAGAAGCAATGATCAGTATCCCCAGTAGTCGTTACGGATT
FD541790       <-- ..................................................
FD549027       <-- ..................................................
FD537820       --> CCGAAGATACAAGAAGCAATGATCAGTATCCCAAGTAGTCGTTACGGATT
EX766495       --> CCGAAGATATAAGAAGCAATGATCAGTATCCCCAGTAGTCGTTACGGATT
FD529374       --> CCGAAAATACAAGAAGCAATGATCAGTATCCCCGGTAGTCGTTACGGATT
EV529467       --> CCGAAGATACAAGAAGCAATGATCAGTATCCCCAGTAGTCGTTACGGATT
FD545128       --> CCGAAGATACAAGAAGCAATGATCAGTATCCCCAGTAGTCGTTACGGATT
EY918700       --> CCGAAGATACAAGAAACAATGATCAGTATCCCCAGTAGTCGTTACGGATT
EY942826       --> CCGAAGATACAAGAAGCAATGATCAGTATCCCCAGTAGTCGTTACGGATT
EY935053       --> CCGAAGATACAAGAAGCAATGATCAGTATCCCCAGTAGTCGTTACGGATT
EX768145       --> CCGAAGATACAAGAAGCAATGATCAGTATCCCCAGTAGTCGTTACGGATT
FD982734       --> CCGAAGATACAAGAAGCAATGATCAGTATCCCCAGTAGTCGTTACGGATT
EV531856       --> CCGAAAATACAAAAAGCAATGATCAGTATCCCCAGTAGTCGTTACGGATT
EW729951       --> ..GAAAATACAAAAAGCAATGATCAGTATCCCCAGTAGTCGTTACGGATT

               251    -    301
UN14095        --> TCATCATCAAACTTCTTTTTGAGTTCTGGGTGCTTCTCAAAGTACTCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524480       <-- TCATCATCAAACTTCTTTTTGAGTTCTGGGTGCTTCTCAAAGTACTCATC
EW725300       <-- TCATCATCAAACTTCTTTTTGAGTTCTGGGTGCTTCTCAAAGTACTCATC
FD541569       <-- TCATCATCAAACTTCTTTTTGAGTTCTGGGTGCTTCTCAAAGTACTCATC
FD535594       <-- TCATCATCAAACTTCTTTTTGAGTTCTGGGTGCTTCTCAAAGTACTCATC
EX762160       <-- TCATCATCAAACTTCTTTTTGAGTTCTGGGTGCTTCTCAAAGTACTCATC
FD978738       <-- TCATCATCAAACTTCTTTTTGAGTTCTGGGTGCTTCTCAAAGTACTCATC
EV526873       <-- TCATCATCAAACTTCTTTTTGAGTTCTGGGTGCTTCTCAAAGTACTCATC
EV527667       <-- TCATCATCAAACTTCTTTTTGAGTTCTGGGTGCTTCTCAAAGTACTCATC
EW731976       <-- TCATCATCAAACTTCTTTTTGAGTTCTGGGTGCTTCTCAAAGTACTCATC
EY939038       <-- TCATCATCAAACTTCTTTTTGAGTTCTGGGTGCTTCTCAAAGTACTCATC
EX764169       <-- TCATCATCAAACTTCTTTTTGAGTTCTGGGTGCTTCTCAAAGTACTCATC
EY915175       <-- TCATCATCAAACTTCTTTTTGAGTTCTGGGTGCTTCTCAAAGTACTCATC
EY922806       <-- TCATCATCAAACTTCTTTTTGAGTTCTGGGTGCTTCTCAAAGTACTCATC
EY946803       <-- TCATCATCAAACTTCTTTTTGAGTTCTGGGTGCTTCTCAAAGTACTCATC
FD533093       <-- TCATCATCAAACTTCTTTTTGAGTTCTGGGTGCTTCTCAAAGTACTCATC
FD986484       <-- TCATCATCAAACTTCTTTTTGAGTTCTGGGTGCTTCTCAAAGTACTCATC
EY914846       <-- TCATCATCAAACTTCTTTTTGAGTTCTGGGTGCTTCTCAAAGTACTCATC
FD541790       <-- ...............................GCTTCTCAAAGTACTCATC
FD549027       <-- ..................................................
FD537820       --> TCATCATCAAACTTCTTTTTGAGTTCTGGGTGCTTCTCAAAGTACTCATC
EX766495       --> TCATCATCAAACTTCTTTTTGAGTTCTGGGTGCTTCTCAAAGTACTCATC
FD529374       --> TCATCATCAAACTTCTTTTTGAGTTCTGGGTGCTTCTCAAAGTACTCATC
EV529467       --> TCATCATCAAACTTCTTTTTGAGTTCTGGGTGCTTCTCAAAGTACTCATC
FD545128       --> TCATCATCAAACTTCTTTTTGAGTTCTGGGTGCTTCTCAAAGTACTCATC
EY918700       --> TCATCATCAAACTTCTTTTTGAGTTCTGGGTGCTTCTCAAAGTACTCATC
EY942826       --> TCATCATCAAACTTCTTTTTGAGTTCTGGGTGCTTCTCAAAGTACTCATC
EY935053       --> TCATCATCAAACTTCTTTTTGAGTTCTGGGTGCTTCTCAAAGTACTCATC
EX768145       --> TCATCATCAAACTTCTTTTTGAGTTCTGGGTGCTTCTCAAAGTACTCATC
FD982734       --> TCATCATCAAACTTCTTTTTGAGTTCTGGGTGCTTCTCAAAGTACTCATC
EV531856       --> TCATCATCAAACTTCTTTTTGAGTTCTGGGGGCTTCTCAAAGTACTCATC
EW729951       --> TCATCATCAAACTTCTTTTTGAGTTCTGGGTGCTTCTCAAAGTACTCATC

               301    -    351
UN14095        --> TGCAGTCATGGTGCTGAGCTTTTTGCTAATCTCCTGGACATCAACAA-TT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524480       <-- TGCAGTCATGGTGCTGAGCTTTTTGCTTATCTCCTGGACATCAACAAATT
EW725300       <-- TGCAGTCATGGTGCTGAGCTTTTTGCTAATCTCCTGGACATCAACAA-TT
FD541569       <-- TGCAGTCATGGTGCTGAGCTTTTTGCTAATCTCCTGGACATCAACAA-TT
FD535594       <-- TGCAGTCATGGTGCTGAGCTTTTTGCTTATCTCCTGGACATCAACAA-TT
EX762160       <-- TGCAGTCATGGTGCTGAGCTTTTTGCTAATCTCCTGGACATCAACAA-TT
FD978738       <-- TGCAGTCATGGTGCTGAGCTTTTTGCTTATCTCCTGGACATCAACAA-TT
EV526873       <-- TGCAGTCATGGTGCTGAGCTTTTTGCTAATCTCCTGGACATCAACAA-TT
EV527667       <-- TGCAGTCATGGTGCTGAGCTTTTTGCTTATCTCCTGGACATCAACAA-TT
EW731976       <-- TGCAGTCATGGTGCTGAGCTTTTTGCTAATCTCCTGGACATCAACAA-TT
EY939038       <-- TGCAGTCATGGTGCTGAGCTTTTTGCTAATCTCCTGGACATCAACAA-TT
EX764169       <-- TGCAGTCATGGTGCTGAGCTTTTTGCTTATCTCCTGGACATCAACAA-TT
EY915175       <-- TGCAGTCATGGTGCTGAGCTTTTTGCTTATCTCCTGGACATCAACAA-TT
EY922806       <-- TGCAGTCATGGTGCTGAGCTTTTTGCTAATCTCCTGGACATCAACAA-TT
EY946803       <-- TGCAGTCATGGTGCTGAGCTTTTTGCTAATCTCCTGGACATCAACAA-TT
FD533093       <-- TGTAGTCATGGTGCTGAGCTTTTTGCTAATCTCCTGGACATCAACAA-CT
FD986484       <-- TGCAGTCATGGTGCTGAGCTTTTTGCTTATCTCCTGGACATCAACAA-TT
EY914846       <-- TGCAGTCATGGTGCTGAGCTTTTTGCTAATCTCCTGGACATCAACAA-TT
FD541790       <-- TGCAGTCATGGTGCTGAGCTTTTTGCTAATCTCCTGGACATCAACAA-TT
FD549027       <-- ..................................................
FD537820       --> TGCAGTCATGGTGCTGAGCTTTTTGCTAATCTCCTGGACATCAACAA-TT
EX766495       --> TGCAGTCATGGTGCTGAGCTTTTTGCTAATCTCCTGGACATCAACAA-TT
FD529374       --> TGTAGTCATGGGGCTGAGCTTTTTGCTAATCTCCTGGACATCAACAA-CT
EV529467       --> TGCAGTCATGGTGCTGAGCTTTTTGCTTATCTCCTGGACATCAACAA-TT
FD545128       --> TGCAGTCATGGTGCTGAGCTTTTTGCTTATCTCCTGGACATCAACAA-TT
EY918700       --> TGCAGTCATGGTGCTGAGCTTTTTGCTAATCTCCTGGACATCAACAA-TT
EY942826       --> TGCAGTCATGGTGCTGAGCTTTTTGCTAATCTCCTGGACATCAACAA-TT
EY935053       --> TGCAGTCATGGTGCTGAGCTTTTTGCTAATCTCCTGGACATCAACAA-TT
EX768145       --> TGCAGTCATGGTGCTGAGCTTTTTGCTTATCTCCTGGACATCAACAA-TT
FD982734       --> TGCAGTCATGGTGCTGAGCTTTTTGCTTATCTCCTGGACATCAACAA-TT
EV531856       --> TGCAGTCATGGGGCTGAGCTTTTTGCTTATCTCCTGGACATCAACAA-TT
EW729951       --> TGCAGTCATGGGGCTGAGCTTTTTGCTAATCTCCTGGACATCAACAA-TT

               351    -    401
UN14095        --> TCTTTCTCCAGACGTTCAGACTCCTTGAGCGATTTCTGTTCTGCTTCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524480       <-- TCTTTCTCAAGACGTTCAGACTCCTTGAGCGATTTCTGTTCTGCTTCTTT  Raphanus raphanistrum subsp. maritimus
EW725300       <-- TCTTTCTCCAGACGTTCAGACTCCCTGAGCGATTTCTGTTCTGCTTCTTT  Raphanus sativus cv Early Scarlet Globe
FD541569       <-- TCTTTCTCCAGACGTTCAGACTCCTTGAGCGATTTCTGTTCTGCTTCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD535594       <-- TCTTTCTCAAGACGTTCAGACTCCTTGAGCGATTTCTGTTCTGCTTCTTT  Raphanus raphanistrum subsp. maritimus
EX762160       <-- TCTTTCTCCAGACGTTCAGACTCCCTGAGCGATTTCTGTTCTGCTTCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD978738       <-- TCTTTCTCAAGACGTTCAGACTCCTTGAGCGATTTCTGTTCTGCTTCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV526873       <-- TCTTCCTCCAGACGTTCAGACTGCTTGAGCGATTTATGTTCTGCTTCTTT  Raphanus raphanistrum subsp. maritimus
EV527667       <-- TCTTTCTCAAGACGTTCAGACTCCTTGAGCGATTTCTGTTCTGCTTCTTT  Raphanus raphanistrum subsp. maritimus
EW731976       <-- TCTTTCTCCAGACGTTCAGACTCCCTGAGCGATTTCTGTTCTGCTTCTTT  Raphanus sativus cv Rat-Tail Radish #3870
EY939038       <-- TCTTTCTCCAGACGTTCAGACTCCCTGAGCGATTTCTGTTCTGCTTCTTT  Raphanus sativus cv Early Scarlet Globe
EX764169       <-- TCTTTCTCAAGACGTTCAGACTCCTTGAGCGATTTCTGTTCTGCTTCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915175       <-- TCTTTCTCAAGACGTTCAGACTCCTTGAGCGATTTCTGTTCTGCTTCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922806       <-- TCTTTCTCCAGACGTTCAGACTGCTTGAGCGATTTATGTTCTGCTTCTTT  Raphanus raphanistrum subsp. landra
EY946803       <-- TCTTTCTCCAGACGTTCAGACTCCCTGAGCGATTTCTGTTCTGCTTCTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD533093       <-- TCTTTCTCCAGACGTTCAGACTGCTTGAGCGATTTATGTTCTGCTTCTTT  Raphanus raphanistrum subsp. maritimus
FD986484       <-- TCTTTCTCAAGACGTTCAGACTCCTTGAGCGAGTTCTGTTCTGCTTCTTT  Raphanus raphanistrum subsp. landra
EY914846       <-- TCTTTCTCCAGACGTTCAGACTCCCTGAGCGATTTCTGTTCTGCTTCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541790       <-- TCTTTCTCCAGACGTTCCGACTCCTTGAGCGATTTCTGTTCTGCTTCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549027       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537820       --> TCTTTCTCCAGACGTTCAGACTCCTTGAGCGATTTCTGTTCTGCTTCTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766495       --> TCTTTCTCCAGACGTTCAGACTCCCTGAGCGATTTCTGTTCTGCTTCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD529374       --> TCTTTCTCCAGACGTTCAAACTGCTTGAGCGATTTATGTTCTGCTTCTTT  Raphanus raphanistrum subsp. maritimus
EV529467       --> TCTTTCTCAAGACGTTCAGACTCCTTGAGCGATTTCTGTTCTGCTTCTTT  Raphanus raphanistrum subsp. maritimus
FD545128       --> TCTTTCTCAAGACGTTCAGACTCCTTGAGCGATTTCTGTTCTGCTTCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY918700       --> TCTTTCTCCAGACGTTCAGACTGCTTGAGCGATTTATGTTCTGCTTCTTT  Raphanus raphanistrum subsp. landra
EY942826       --> TCTTTCTCCAGACGTTCAGACTCCCTGAGCGATTTCTGTTCTGCTTCTTT  Raphanus sativus cv Rat-Tail Radish #3870
EY935053       --> TCTTTCTCCAGACGTTCAGACTCCCTGAGCGATTTCTGTTCTGCTTCTTT  Raphanus sativus cv Early Scarlet Globe
EX768145       --> TCTTTCTCAAGACGTTCAGACTCCTTGAGCGATTTCTGTTCTGCTTCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982734       --> TCTTTCTCAAGACGTTCAGACTCCTTGAGCGAGTTCTGTTCTGCTTCTTT  Raphanus raphanistrum subsp. landra
EV531856       --> TCTTTCTCAAGACGTTCAAACTCCTTGAGCGATTTCTGTTCTGCTTCTTT  Raphanus raphanistrum subsp. maritimus
EW729951       --> TCTTTCTCCAAACGTTCAAACTCCCTGAGCGATTTCTGTTCTGCTTCT..  Raphanus sativus cv Early Scarlet Globe

               401    -    451
UN14095        --> CAGTTCCACCAACAAAGCATCGAACTTTGGCTTGTATTCAGGAGTAACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524480       <-- CAGTTCCACCAACAAAGCATCGAACTTTGGCTTGTATTCAGGAGTAACAG
EW725300       <-- CAGTTCCACCAACAAAGCATCGAACTTTGGCTTGTATTCAGGAGTAACAG
FD541569       <-- CAGTTCCACCAACAAAGCATCGAACTTTGGCTTGTATTCAGGAGTAACAG
FD535594       <-- CAGTTCCACCAACAAAGCATCGAACTTTGGCTTGTATTCAGGAGTAACAG
EX762160       <-- TAGTTCCACCAACAAAGCATCGAACTTTGGCTTGTATTCAGGAGTAACAG
FD978738       <-- CAGTTCCACCAACAAAGCATCGAACTTTGGCTTGTATACAGGAGTAACAG
EV526873       <-- CAGTTCCACCAACAAAGCATCGAACTCTGGCTTGTATTCAGGAGTAACAG
EV527667       <-- CAGTTCCACCAACAAAGCATCGAACTTTGGCTTGTATTCAGGAGTAACAG
EW731976       <-- CAGTTCCACCAACAAAGCATCGAACTTTGGCTTGTATTCAGGAGTAACAG
EY939038       <-- CAGTTCCACCAACAAAGCATCGAACTTTGGCTTGTATTCAGGAGTAACAG
EX764169       <-- CAGTTCCACCAACAAAGCATCGAACTTTGGCTTGTATTCAGGAGTAACAG
EY915175       <-- CAGTTCCACCAACAAAGCATCGAACTTTGGCTTGTATTCAGGAGTAACAG
EY922806       <-- CAGTTCCACCAACAAAGCATCGAACTTTGGCTTGTATTCAGGAGTAACAG
EY946803       <-- CAGTTCCACCAACAAAGCATCGAACTTTGGCTTGTATTCAGGAGTAACAG
FD533093       <-- CAGTTCCACCGACAAAGCATCGAACTTTGGCTTGTATTCAGGAGTAACAG
FD986484       <-- CAGTTCCACCAACAAAGCATCGAACTTTGGCTTGTATTCAGGAGTAACAG
EY914846       <-- CAGTTCCACCAACAAAGCATCGAACTTTGGCTTGTATTCAGGAGTAACAG
FD541790       <-- CAGTTCCACCAACAAAGCATCGAACTTTGGCTTGTATTCAGGAGTAACAG
FD549027       <-- ..................................................
FD537820       --> CAGTTCCACCAACAAAGCATCGAACTTTGGCTTGTATTCAGGAGTAACAG
EX766495       --> TAGTTCCACCAACAAAGCATCGAACTTTGGCTTGTATTCAGGAGTAACAG
FD529374       --> CAGTTCCACCGACAAAGCATCGAACTTTGGCTTGTATTCAGGAGTAACAG
EV529467       --> CAGTTCCACCAACAAAGCATCGAACTTTGGCTTGTATTCAGGAGTAACAG
FD545128       --> CAGTTCCACCAACAAAGCATCGAACTTTGGCTTGTATTCAGGAGTAACAG
EY918700       --> CAGTTCCACCAACAAAGCATCGAACTTTGGCTTGTATTCAGGAGTAACAG
EY942826       --> CAGTTCCACCAACAAAGCATCGAACTTTGGCTTGTATTCAGGAGTAACAG
EY935053       --> CAGTTCCACCAACAAAGCATCGAACTTTGGCTTGTATTCAGGAGTAACAG
EX768145       --> CAGTTCCACCAACAAAGCATCGAACTTTGGCTTGTATTCAGGAGTAACAG
FD982734       --> CAGTTCCACCAACAAAGCATCGAACTTTGGCTTGTATTCAGGAGTAACAG
EV531856       --> CAGTTCCACCAACAAAGCATCGAACTTTGGCTTGTATTCAGGAGTAACAG
EW729951       --> ..................................................

               451    -    501
UN14095        --> TGTCCACGAACTTGGGAATCTCAACGCTGTCATAAGCTTCCTTGTACATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524480       <-- TGTCCACGAACTTGGGAATCTCAACGCTGTCATAAGCTTCCTTGTACATG
EW725300       <-- TGTCCACGAACTTGGGAATCTCAACGCTGTCATAAGCTTCCTTGTACATG
FD541569       <-- TGTCCACGAACTTGGGAATCTCAACGCTGTCATAAGCTTCCTTGTACATG
FD535594       <-- TGTCCACGAACTTGGGAATCTCAACGCTGTCATAAGCTTCCTTGTACATG
EX762160       <-- TGTCCACGAACTTGGGAATCTCAACGCTGTCATAAGCTTCCTTGTACATG
FD978738       <-- TGTCCACGAACTTGGGAATCTCAACGCTGTCATAAGCTTCCTTGTACATA
EV526873       <-- TGTCCACGAACTTGGGAATCTCAACGCTGTCATAAGCTTCCTTGTACATG
EV527667       <-- TGTCCACGAACTTGGGAATCTCAACGCTGTCATAAGCTTCCTTGTACATG
EW731976       <-- TGTCCACGAACTTGGGAATCTCAACGCTGTCATAAGCTTCCTTGTACATG
EY939038       <-- TGTCCACGAACTTGGGAATCTCAACGCTGTCATAAGCTTCCTTGTACATG
EX764169       <-- TGTCCACGAACTTGGGAATCTCAACGCTGTCATAAGCTTCCTTGTACATG
EY915175       <-- TGTCCACGAACTTGGGAATCTCAACGCTGTCATAAGCTTCCTTGTACATA
EY922806       <-- TGTCCACGAACTTGGGAATCTCAACGCTGTCATAAGCTTCCTTGTACATG
EY946803       <-- TGTCCACGAACTTGGGAATCTCAACGCTGTCATAAGCTTCCTTGTACATG
FD533093       <-- TGTCCACGAACTTGGGAATCTCAACGCTGTCATAAGCTTCCTTGTACATG
FD986484       <-- TGTCCACGAACTTGGGAATCTCAACGCTGTCATAAGCTTCCTTGTACATG
EY914846       <-- TGTCCACGAACTTGGGAATCTCAACGCTGTCATAAGCTTCCTTGTACATG
FD541790       <-- TGTCCACGAACTTGGGAATCTCAACGCTGTCATAAGCTTCCTTGTACATG
FD549027       <-- .................ATCTCAACGCTGTCATAAGCTTCCTTGTACATG
FD537820       --> TGTCCACGAACTTGGGAATCTCAACGCTGTCATAAGCTTCCTTGTACATG
EX766495       --> TGTCCACGAACTTGGGAATCTCAACGCTGTCATAAGCTTCCTTGTACATG
FD529374       --> TGTCCACGAACTTGGGAATCTCAACGCTGTCATAAGCTTCCTTGTACATG
EV529467       --> TGTCCACGAACTTGGGAATCTCAACGCTGTCATAAGCTTCCTTGTACATG
FD545128       --> TGTCCACGAACTTGGGAATCTCAACGCTGTCATAAGCTTCCTTGTACATG
EY918700       --> TGTCCACGAACTTGGGAATCTCAACGCTGTCATAAGCTTCCTTGTACATG
EY942826       --> TGTCCACGAACTTGGGAATCTCAACGCTGTCATAAGCTTCCTTGTACATG
EY935053       --> TGTCCACGAACTTGGGAATCTCAACGCTGTCATAAGCTTCCTTGTACATG
EX768145       --> TGTCCACGAACTTGGGAATCTCAACGCTGTCATAAGCTTCCTTGTACATG
FD982734       --> TGTCCACGAACTTGGGAATCTCAACGCTGTCATAAGCTTCCTTGTACATG
EV531856       --> TGTCCACAAACTTGGGAATCTCAACGCTGTCATAAGCTTCCTTGTACATG
EW729951       --> ..................................................

               501    -    551
UN14095        --> TCAACAATGCCAGACCCAATACCCTTTCTGTAGAAATCCCAATCAATGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524480       <-- TCAACAATGCCAGACCCAATACCCTTTCTGTAGAAATCCCAATCAATGGG
EW725300       <-- TCAACAATGCCAGACCCAATACCCTTTCTGTAGAAATCCCAATCAATGGG
FD541569       <-- TCAACAATGCCAGACCCAATACCCTTTCTGTACATATCCCAATCAATGGG
FD535594       <-- TCAACAATGCCAGACCCAATACCCTCTCTGTAGAAATCCCAATCAATGGG
EX762160       <-- TCAACAATGCCAGACCCAATACCCTTTCTGTAGAAATCCCAATCAATGGG
FD978738       <-- TCAACAATGCCAGAGCCAATACCCTTTCCGTAGAAATCCCAATCAATGGG
EV526873       <-- TCGACAATGCCAGACCCAATACCCTTTCTGTAGAAATCCCAATCAATGGG
EV527667       <-- TCAACAATGCCAGACCCAATACCCTTTCTGTAGAAATCCCAATCAATGGG
EW731976       <-- TCAACAATGCCAGACCCAATACCCTTTCTGTAGAAATCCCAATCAATGGG
EY939038       <-- TCAACAATGCCGGACCCAATACCCTTTCTGTAGAAATCCCAATCAATGGG
EX764169       <-- TCAACAATGCCAGGCCCAATACCCTTTCTGTAGAAATCCCAATCAATGGG
EY915175       <-- TCAACAATGCCAGAGCCAATACCCTTTCTGTAGAAATCCCAATCAATGGG
EY922806       <-- TCAACAATGCCAGAGCCAATACCCTT-CTGTAGAAATCCCAATCAATGGG
EY946803       <-- TCAACAATGCCAGACCCAATACCCTTTCTGTAGAAATCCCAATCAATGGG
FD533093       <-- TCAACAATGCCAGACCCAATACCCTTTCTGTAGAAATCCCAATCAATGGG
FD986484       <-- TCAACAATGCCAGACCCAATACCCTTTCTGTAGAAATCCCAATCAATGGG
EY914846       <-- TCAACAATGCCAGACCCAATACCCTTTCTGTAGAAATCCCAATCAATGGG
FD541790       <-- TCAACAATGCCAGACCCAATACCCTTTCTGTACATATCCCAATCAATGGG
FD549027       <-- TCAACAATGCCAGACCCAATACCCTTTCTGTAGAAATCCCAATCAATGGG
FD537820       --> TCAACAATGCCAGACCCAATACCCTTTCTGTACATATCCCAATCAATGGG
EX766495       --> TCAACAATGCCAGACCCAATACCCTTTCTGTAGAAATCCCAATCAATGGG
FD529374       --> TCAACAATGCCAGACCCAATACCCTTTCTGTAGAAATCCCAATCAATGGG
EV529467       --> TCAACAATGCCAGACCCAATACCCTTTCTGTAGAAATCCCAATCAATGGG
FD545128       --> TCAACAATGCCAGACCCAATACCCTTTCTGTAGAAATCCCAATCAATGGG
EY918700       --> TCAACAATGCCAGAGCCAATACCCTT-CTGTAGAAATCCCAATCAATGGG
EY942826       --> TCAACAATGCCAGACCCAATACCCTTTCTGTAGAAATCCCAATCAATGGG
EY935053       --> TCAACAATGCCGGACCCAATACCCTTTCTGTAGAAATCCCAATCAATGGG
EX768145       --> TCAACAATGCCAGGCCCAATACCCTTTCTGTAGAAATCCCAATCAATGGG
FD982734       --> TCAACAATGCCAGACCCAATACCCTTTCTGTAGAAATCCCAATCAATGGG
EV531856       --> TCAACAATGCCAAACCCAATACCCTTTCTGTAAAAATCCCAATCAATGGG
EW729951       --> ..................................................

               551    -    601
UN14095        --> TTCAGGCTCCTGACTGAACTTGGTCTGGAGCTGAGTGTTAACCTCATCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524480       <-- TTCAGGCTCCTGACTGAACTTGGTCTGGAGCTAAGTGTTAACCTCATCGA  Raphanus raphanistrum subsp. maritimus
EW725300       <-- TTCCGGCTCCTGACTGAACTTGGTCTGGAGCTGAGTGTTAACCTCATCGA  Raphanus sativus cv Early Scarlet Globe
FD541569       <-- TTCAGGCTCCTGGCTGAACTTGGTCTGGAGCTGAGCGTTAACCTCATCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD535594       <-- TTCAGGCTCCTGACTGAACTTGGTCTGGAGCTGAGTGTTAACCTCATCGA  Raphanus raphanistrum subsp. maritimus
EX762160       <-- TTCCGGCTCCTGACTGAACTTGGTCTGGAGCTGAGTGTTAACCTCATCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD978738       <-- TTCAGGCTCCTGACTGAACTTGGTCTGGAGCTGAGTGTTAACCTCATCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV526873       <-- TTCAGGCTCCTGACTGAACTTGGTCTGGAGCTGAGTGTTAACCTCATCGA  Raphanus raphanistrum subsp. maritimus
EV527667       <-- TTCAGGCTCCTGACTGAACTTGGTCTGGAGCTGAGTGTTAACCTCAACGA  Raphanus raphanistrum subsp. maritimus
EW731976       <-- TTCCGGCTCCTGACTGAACTTGGTCTGGAGCTGAGTGTTAACCTCATCGA  Raphanus sativus cv Rat-Tail Radish #3870
EY939038       <-- TTCCGGCTCCTGACTGAACTTGGTCTGGAGCTGAGTGTTAACCTCATCGA  Raphanus sativus cv Early Scarlet Globe
EX764169       <-- TTTGGGCTCCTGACTGAACTTGGTCTGGAGCTGAGTGTTAACCTCATCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915175       <-- TTCAGGCTCCTGACTGAACTTGGTCTGGAGCTGAGTGTTAACCTCATCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922806       <-- TTCAGGCTCCTGACTGAACTTGGTCTGGAGCTGAGTGTTAACCTCATCGA  Raphanus raphanistrum subsp. landra
EY946803       <-- TTCCGGCTCCTGACTGAACTTGGTCTGGAGCTGAGTGTTAACCTCATCGA  Raphanus sativus cv Rat-Tail Radish #3870
FD533093       <-- TTCAGGCTCCTGACTGAACTTGGTCTGGAGCTGAGTGTTAACCTCATCGA  Raphanus raphanistrum subsp. maritimus
FD986484       <-- TTCAGGCTCCTGACTGAACTTGGTCTGGAGCTGAGTGTTAACCTCATCGA  Raphanus raphanistrum subsp. landra
EY914846       <-- TTCCGGCTCCTGACTGAACTTGGTCTGGAGCTGAGTGTTAACCTCATCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541790       <-- TCCAGGCTCCTGGCTGAACTTGGTCTGGAGCTGAGTGTTAACCTCATCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549027       <-- TTCAGGCTCCTGACTGAACTTGGTCTGGAGCTGAGTGTTAACCTCATCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537820       --> TTCAGGCTCCTGGCTGAACTTGGTCTGGAGCTGAGCGTTAACCTCATCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766495       --> TTCCGGCTCCTGACTGAACTTGGTCTGGAGCTGAGTGTTAACCTCATCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD529374       --> TTCAGGCTCCTGACTGAACTTGGTCTGGAGCT..................  Raphanus raphanistrum subsp. maritimus
EV529467       --> TTCAGGCTCCTGACTGAACTTGGTCTGGAGCTGAGTGTTAACCTCATCGA  Raphanus raphanistrum subsp. maritimus
FD545128       --> TTCAGGCTCCTGACTGAACTTGGTCTGGAGCTGAGTGTTAACCTCATCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY918700       --> TTCAGGCTCCTGACTGAACTTGGTCTGGAGCTGAGTGTTAACCTCATCGA  Raphanus raphanistrum subsp. landra
EY942826       --> TTCCGGCTCCTGACTGAACTTGGTCTGGAGCTGAGTGTTAACCTCATCGA  Raphanus sativus cv Rat-Tail Radish #3870
EY935053       --> TTCCGGCTCCTGACTGAACTTGGTCTGGAGCTGAGTGTTAACCTCATCGA  Raphanus sativus cv Early Scarlet Globe
EX768145       --> TTTGGGCTCCTGACTGAACTTGGTCTGGAGCTGAGTGTTAACCTCATCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982734       --> TTCAGGCTCCTGACTGAACTTGGTCTGGAGCTGAGTGTTAACCTCATCGA  Raphanus raphanistrum subsp. landra
EV531856       --> TTCAGGCTCCTGACTGAACTTGGTCTGGAGCTGAGTGTTAACCTCAACGA  Raphanus raphanistrum subsp. maritimus
EW729951       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               601    -    651
UN14095        --> AAGCACGACGGAGGTTAGAGAACTCTCTTCGAGCCTCGTCGGTTACAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524480       <-- AAGCACGACGGAGGTTAGAGAACTCTCTTCGAGCCTCGTCGGTTACAAGA  Raphanus raphanistrum subsp. maritimus
EW725300       <-- AAGCACGGCGGAGGTTAGAGAACTCTCTTCGAGCCTCGTCGGTTACAAGA  Raphanus sativus cv Early Scarlet Globe
FD541569       <-- AAGCACGACGGAGGTTAGAGAACTCTCTTCGAGCCTCGTCGGTCACAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD535594       <-- AAGCACGACGGAGGTTAGAGAACTCTCTTCGAGCCTCGTCGGTTACAAGA  Raphanus raphanistrum subsp. maritimus
EX762160       <-- AAGCACGGCGGAGGTTAG--AACTCTCTTCGAGCCTCGTCGGTTACAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD978738       <-- AAGCACGACGGAGGTTAGAGAACTCTCTTCGAGCCTCATCGGTGACAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV526873       <-- AAGCACGACGGAGGTTAGAGAACTCTCTTCGAGCCTCGTCGGTTACAAGA  Raphanus raphanistrum subsp. maritimus
EV527667       <-- AAGCACGACGGAGGTTAGAGAACTCTCTTCGAGCCTCGTCGGTTACAAGA  Raphanus raphanistrum subsp. maritimus
EW731976       <-- AAGCACGGCGGAGGTTAGAGAACTCTCTTCGAGCCTCGTCGGTTACAAGA  Raphanus sativus cv Rat-Tail Radish #3870
EY939038       <-- AAGCACGGCGGAGGTTAGAGGACTCTCTTCGAGCCTCGTCGGTTACAAGA  Raphanus sativus cv Early Scarlet Globe
EX764169       <-- AAGCACGACGGAGGTTAGAGAACTCTCTTCGAGCCTCGTCGGTTACAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915175       <-- AAGCACGACGGAGGTTAGAGAACTCTCTTCGAGCCTCATCGGTGACAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922806       <-- AAGCACGACGGAGGTTAGAGAACTCTCTTCGAGCCTCGTCGGTTACAAGA  Raphanus raphanistrum subsp. landra
EY946803       <-- AAGCACGGCGGAGGTTAGAGAACTCTCTTCGAGCCTCGTCGGTTACAAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD533093       <-- AAGCACGACGGAGGTTAGAGAACTCTCTTCGAGCCTCGTCGGTTACAAGA  Raphanus raphanistrum subsp. maritimus
FD986484       <-- AAGCACGACGGAGGTTAGAGAACTCTCTTCGAGCCTCGTCGGTc......  Raphanus raphanistrum subsp. landra
EY914846       <-- AAGCACGGCGGAGGTTAGAGAACTCTCTTCGAGCCTCGTCGGTTACAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541790       <-- AAGCACGACGGAGGTTAGAGAACTCTCTTCGAGCCTCGTCGGTCACAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549027       <-- AAGCACGACGGAGGTTAGAGAACTCTCTTCGAGCCTCGTCGGTTACAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537820       --> AAGCACGACGGAGGTTAGAGAACTCTCTTCGAGCCTC.............  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766495       --> AAGCACGGCGGAGGTTAGA--ACTCTCTTCGAGCCTCGTCGGTTACAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD529374       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV529467       --> AAGCACGACGGAGGTTAGAGAACTCTCTTCGAGCCTCGTCGGTTACAAGA  Raphanus raphanistrum subsp. maritimus
FD545128       --> AAGCACGACGGAGGTTAGAGAACTCTCTTCGAGCCTCGTCGGTTACAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY918700       --> AAGCACGACGGAGGTTAGAGAACTCTCTTCGAGCCTCGTCGGTTACAAGA  Raphanus raphanistrum subsp. landra
EY942826       --> AAGCACGGCGGAAGTTAGAGAACTCTCTTCGAGCCTCGTCGGTTACAAGA  Raphanus sativus cv Rat-Tail Radish #3870
EY935053       --> AAGCACGGCGGAGGTTAGAGGACTCTCTTCGAGCCTCGTCGGTTACAAGA  Raphanus sativus cv Early Scarlet Globe
EX768145       --> AAGCACGACGGAGGTTAGAGAACTCTCTTCGAGCCTCGTCGGTTACAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982734       --> AAGCACGACGGAGGTTAGAGAACTCTCTTCGAGCCTCGTCGGTc......  Raphanus raphanistrum subsp. landra
EV531856       --> AAGCACGAC.........................................  Raphanus raphanistrum subsp. maritimus
EW729951       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               651    -    701
UN14095        --> ACCTTCGCCATCCCTTCCCAATCTATTGTCCTCGACGCTTTGAATGCCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524480       <-- ACCTTCGCCATCCCTTCCCAATCTATTGTCCTCGACGCTTTGAATGCCAC
EW725300       <-- ACCTTCGCCATCCCTTCCCAATCTATTGTCCTCGACGCTTTGAATGCCAC
FD541569       <-- ACCTTCGCCATCCCTTCCCAATCTATTGTCCTCGACGCTTTGAATGCCAC
FD535594       <-- ACCTTCGCCATCCCTTCCCAATCTATTGTCCTCGACGCTTTGAATGCCAC
EX762160       <-- ACCTTCGCCATCCCTTCCCAATCTATTGTCCTCGACGCTTTGAATGCCAC
FD978738       <-- ACCTTCGCCATCCCTTCCCAATCTATCGTCCTTGAAGCTTTGAACGCCAC
EV526873       <-- ACCTTCGCCATCCCTTCCCAATCTATTGTCCTCGACGCTTTGAATGCCAC
EV527667       <-- ACCTTCGCCATCCCTTCCCAATCTATTGTCCTCGACGCTTTGAATGCCAC
EW731976       <-- ACCTTCGCCATCCCTTCCCAATCTATTGTCCTCGACGCTTTGAATGCCAC
EY939038       <-- ACCTTCGCCATCCCTTCCCAATCTATTGTCCTCGACGCTTTGAATGCCAC
EX764169       <-- ACCTTCGCCATCCCTTCCCAATCTATTGTCCTCGACGCTTTGAATGCCAC
EY915175       <-- ACCTTCGCCATCCCTTCCCAATCTATCGTCCTTGAAGCTTTGAACGCCAC
EY922806       <-- ACCTTCGCCATCCCTTCCCAATCTATTGTCCTCGACGCTTTGAATGCCAC
EY946803       <-- ACCTTCGCCATCCCTTCCCAATCTATTGTCCTCGACGCTTTGAATGCCAC
FD533093       <-- ACCTTCGCCATCCCTTCCCAATCTATTGTCCTCGACGCTTTGAATGCCAC
FD986484       <-- ..................................................
EY914846       <-- ACCTTCGCCATCCCTTCCCAATCTATTGTCCTCGACGCTTTGAATGCCAC
FD541790       <-- ACCTTCGCCATCCCTTCCCAATCTATTGTCCTCGACGCTTTGAATGCCAC
FD549027       <-- ACCTTCGCCATCCCTTCCCAATCTATTGTCCTCGACGCTTTGAATGCCAC
FD537820       --> ..................................................
EX766495       --> ACCTTCGCCATCCCTTCCCAATCTATTGTCCTCGACGCTTTGAATGCCAC
FD529374       --> ..................................................
EV529467       --> ACCTTCGCCATCCCTTCCCAATCTATTGTCCTCGACGCTTTGAATGCCAC
FD545128       --> ACCTTCGCCATCCCTTCCCAATCTATTGTCCTCGACGCTTTGAATGCCAC
EY918700       --> ACCTTCGCCATCCCTTCCCAATCTATTGTCCTCGACGCTTTGAATGCCAC
EY942826       --> ACCTTCGCCATCCCTTCCCAATCTATTGTCCTCGACGCTTTGAATGCCAC
EY935053       --> ACCTTCGCCATCCCTTCCCAATCTATTGTCCTCGACGCTTTGAATGCCAC
EX768145       --> ACCTTCGCCATCCCTTCCCAATCTATTGTCCTCGACGCTTTGAATGCCAC
FD982734       --> ..................................................
EV531856       --> ..................................................
EW729951       --> ..................................................

               701    -    751
UN14095        --> ATCCGCTATTTTCTTACCGGCTCCGCTCATTTTTTT-T-C--ACCCTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524480       <-- ATCCGCTATTTTCTTACCGGCTCCGCTCATTTTTTT-T-CTCACCCTGAT  Raphanus raphanistrum subsp. maritimus
EW725300       <-- ATCCGCTATTTTCTTACCGGCTCCGCTCATTTTTTT-T-C--ACCCTGAT  Raphanus sativus cv Early Scarlet Globe
FD541569       <-- ATCCGCGATTTTCTTACCGGCTCCGCTCATTTTTTTAT-C--ACCCTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD535594       <-- ATCCGCTATTTTCTTACCGGCTCCGCTCATTTTTTT-T-CTCACCCTGAT  Raphanus raphanistrum subsp. maritimus
EX762160       <-- ATCCGCTATTT-CTTACCGGCTCCGCTCATTTTTTT-T-C--ACCCTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD978738       <-- ATCCGCGATTTTCTTACCGGCTCCACTCATTTTAGT-T-C--ACCCTGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV526873       <-- ATCCGCTATTTTCTTACCGGCTCCGCTCATTTTTTT-T-C--ACCCTGAT  Raphanus raphanistrum subsp. maritimus
EV527667       <-- ATCCGCTATTTTCTTACCGGCTCCGCTCATTTTTTT-T-CTCACCCTGAT  Raphanus raphanistrum subsp. maritimus
EW731976       <-- ATCCGCTATTTTCTTACCGGCTCCGCTCATTTTTTT-T-C--ACCCTGAT  Raphanus sativus cv Rat-Tail Radish #3870
EY939038       <-- ATCCGCTATTTTCTCACCGGCTCCGCTCATTTTTTT-T-C--ACCCTGAT  Raphanus sativus cv Early Scarlet Globe
EX764169       <-- ATCCGCTATTTTCTTACCGGCTCCGCTCATTTTTTT-T-CTCACCCTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915175       <-- ATCCGCGATTTTCTTACCGGCTCCGCTCATTTTAGT-T-C--ACCCTGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922806       <-- ATCCGCTATTTTCTTACCGGCTCCGCTCATTTTTTT-T-Ccc........  Raphanus raphanistrum subsp. landra
EY946803       <-- ATCCGCTATTTTCTTACCGGCTCCGCTCATTTTTTT-T-C--ACCCTGAT  Raphanus sativus cv Rat-Tail Radish #3870
FD533093       <-- ATCCGCTATTTTCTTACCGGCTCCGCTCATTTTTTT-T-C--ACCCTGAT  Raphanus raphanistrum subsp. maritimus
FD986484       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY914846       <-- ATCCGCTATCTTCTTACCGGCTCCGCTCATTTTTTT-T-C--ACCCTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541790       <-- ATCCGCGATTTTCTTACCGGCCCCGCTCATTTTTTT-TTC--ACCCTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549027       <-- ATCCGCTATTTTCTTACCGGCTCCGCTCATTTTTTT-T-CTCACCCTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537820       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766495       --> ATCCGCTATTT-CTTACCGGCTCCGCTCAT....................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD529374       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV529467       --> ATCCGCTATTTTCTTACCGGCT............................  Raphanus raphanistrum subsp. maritimus
FD545128       --> ATCCGCTATTTTCTT...................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY918700       --> ATCCGCTATTTTCTTACCGGCTCCGCTCATTTTTTT-T-Ccc........  Raphanus raphanistrum subsp. landra
EY942826       --> ATCCGCTATTTTCTTACCGGCTCCGCTCATTTTTTT-T-C--ACCCTGAT  Raphanus sativus cv Rat-Tail Radish #3870
EY935053       --> ATCCGCTATTTTCTCACCGGCTCCGCTCATTTTTTT-T-C--ACCCTGAT  Raphanus sativus cv Early Scarlet Globe
EX768145       --> ATCCGCTATTTTCTTACCGGCTCCGCTCATTTTTTT-T-CTCACCCTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982734       --> ..................................................  Raphanus raphanistrum subsp. landra
EV531856       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW729951       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               751    -    801
UN14095        --> GAAATGC-GCGAAGAGGAGGAGGAAGACGAAGATGTAAAACGTCGTCCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524480       <-- GAAAT.............................................  Raphanus raphanistrum subsp. maritimus
EW725300       <-- GAAAatcc..........................................  Raphanus sativus cv Early Scarlet Globe
FD541569       <-- AAAATGC---GAAGAGGAGGAGGAAGAAGAAGATGTAAAACGTCGTCCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD535594       <-- Gcc...............................................  Raphanus raphanistrum subsp. maritimus
EX762160       <-- GAAATGCTGCGAAGAGGAGGAGGAAGACGAAGATGTAAAACGTCGTCCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD978738       <-- GAAATGCttgcgatcc..................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV526873       <-- GAAATGCTGCGAAGAGGAGGAGGAAGAAGAAGATGTAAA-CGTCGTCCGA  Raphanus raphanistrum subsp. maritimus
EV527667       <-- GAAATGC---GAAGAGGAGGAGGAAGAAGAAGATGTAAA-CGTCGTCCc.  Raphanus raphanistrum subsp. maritimus
EW731976       <-- GAAATGCTGCGAAGAGGAGGAGGAAGACcc....................  Raphanus sativus cv Rat-Tail Radish #3870
EY939038       <-- GAAATGCTGCGAAGAGGAGGAGGAAGACGAAGATGTAAAACGTCGTCCGA  Raphanus sativus cv Early Scarlet Globe
EX764169       <-- GAAATGC-Gaagaggaagaagatgtaaaccc...................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915175       <-- GAAGTGCttgcgatcc..................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922806       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY946803       <-- GAAATGCtgccc......................................  Raphanus sativus cv Rat-Tail Radish #3870
FD533093       <-- GAAATGCTGCGAAGAGGAGGAGGcc.........................  Raphanus raphanistrum subsp. maritimus
FD986484       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY914846       <-- GAAATGCtgc........................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541790       <-- c.................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549027       <-- GAAATG............................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537820       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766495       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD529374       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV529467       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD545128       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY918700       --> ..................................................  Raphanus raphanistrum subsp. landra
EY942826       --> GAAATGCtgccc......................................  Raphanus sativus cv Rat-Tail Radish #3870
EY935053       --> GAAATGCTGCGAAGAGGAGGAGGAAGACGAAGATGTAAAACGTCGTCCGA  Raphanus sativus cv Early Scarlet Globe
EX768145       --> GAAATGC-Gaagaggaagaagatgtaaaccc...................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982734       --> ..................................................  Raphanus raphanistrum subsp. landra
EV531856       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW729951       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               801    -    851
UN14095        --> TCCGACCAATGAAGGGGACC
                   ~~~~~~~~~~~~~~~~~~~~
EV524480       <-- ....................
EW725300       <-- ....................
FD541569       <-- TCCGACCAATGAAGGGGACC
FD535594       <-- ....................
EX762160       <-- TCCGACCAATGAAGGGGcc.
FD978738       <-- ....................
EV526873       <-- TCCGACCAATGAAGGGGcc.
EV527667       <-- ....................
EW731976       <-- ....................
EY939038       <-- TCCGACCAATGAAGGGGcc.
EX764169       <-- ....................
EY915175       <-- ....................
EY922806       <-- ....................
EY946803       <-- ....................
FD533093       <-- ....................
FD986484       <-- ....................
EY914846       <-- ....................
FD541790       <-- ....................
FD549027       <-- ....................
FD537820       --> ....................
EX766495       --> ....................
FD529374       --> ....................
EV529467       --> ....................
FD545128       --> ....................
EY918700       --> ....................
EY942826       --> ....................
EY935053       --> TCCGACCAATGAAGGGcc..
EX768145       --> ....................
FD982734       --> ....................
EV531856       --> ....................
EW729951       --> ....................