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Alignment for radish unigene UN14103

               1      -     51
UN14103        --> CGTCACCATGGTAACACTGGTTAATCATTAAGATGAATGATGTGGGTGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540225       <-- ..................................................
FD941829       <-- ..................................................
EY929447       <-- ..................................................
FD550794       <-- ..................................................
FD532272       <-- ..................................................
FD981572       <-- ..................................................
FY447696       <-- ..................................................
FY441624       <-- ..................................................
EV551307       <-- ..................................................
EV546428       --> CGTCACCATGGTAACACTGGTTAATCATTAAGATGAATGATGTGGGTGAC
EY925875       --> ..................................................
FD536768       --> ..................................................
FD937378       --> ..................................................
FY430641       --> ..................................................

               51     -    101
UN14103        --> ATCTGACAATCAACACAGTACTATTATTCATCTTTAAGGTATTACAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540225       <-- ....GACAATCAACACAGTACTATTATTCATCTTTAAGGTATTACAAAAA
FD941829       <-- ....GACAATCAACACAGTACTATTATTCATCTTTAAGGTATTACAAAAA
EY929447       <-- ......CAATCAACACAGTACTATTATTCATCTTTAAGGTATTACAAAAA
FD550794       <-- ......CAATCAACACAGTACTATTATTCATCTTTAAGGTATTACAAAAA
FD532272       <-- ....................................AGGTAT-ACAAAAA
FD981572       <-- .....................................GGTATTACAAAAA
FY447696       <-- ..................................................
FY441624       <-- ..................................................
EV551307       <-- ..................................................
EV546428       --> ATCTGACAATCAACACAGTACTACTATTCATCTTTAAGGTATTACAAAAA
EY925875       --> ....GACAATCAACACAGTACTATTATTCATCTTTAAGGGATTACAAAAA
FD536768       --> ....GACAATCAACACAGTACTATTATTCATCTTTAAGGTATTACAAAAA
FD937378       --> ....GACAATCAACACAGTACTATTATTCATCTTTAAGGTATTACAAAAA
FY430641       --> .....gacATCAACACAGTACTATTATTCATCTTTAAGGTATTACAAAAA

               101    -    151
UN14103        --> -TCTGTGTTTGATTTTGGTAGCAAAAGAATCATATGATGATGACACAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540225       <-- -TCTGTGTTTGATTTTGGTAGCAAAAGAATCATATGATGATGACACAGTA
FD941829       <-- -TCTGTGTTTGATTTTGGTAGCAAAAGAATCATATGATGACGACACAGTA
EY929447       <-- -TCTGTGCTTGATCTTGGTAGCAAAAGAATCATATGATGATGACACAGTA
FD550794       <-- -TCTGTGTTTGATTTTGGTAGCAAAAGAATCATATGATGACGACACAGTA
FD532272       <-- -TCTGTGTT-GA-TCTGGTAGCAAAAGAATCATATGATGATGACACAGTA
FD981572       <-- ATCTGTGTTTGATCTTGGTAGCAAAAGAATCATATGATGATGACACAGTA
FY447696       <-- ..................................................
FY441624       <-- ..................................................
EV551307       <-- ..................................................
EV546428       --> -TCTGTGTTTGATCTTGGTAGCAAAAGAATCATATGATGATGACACAGTA
EY925875       --> -TCTGTGCTTGATTTTGGTAGCAAAAAAATCATATGATGATGACACAGTA
FD536768       --> -TCTGTGTTTGATTTTGGTAGCAAAAGAATCATATGATGATGACACAGTA
FD937378       --> -TCTGTGTTTGATTTTGGTAGCAAAAGAATCATATGATGACGACACAGTA
FY430641       --> -TCTGTGTTTGATCTTGGTAGCAAAAGAATCATATGATGATGACACAGTA

               151    -    201
UN14103        --> TATAAGTTACTACAACATACAAATAAATTTATCTGTCAAAAGTTTTTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540225       <-- TATAAGTTACTACAACATACAAATAAATTTATCTGTCAAAAGTTTTTGAG
FD941829       <-- TATAAGTTACTACAACATACAAATAAATTTATCTGTCAAAAGTTTTTGAG
EY929447       <-- TATAAGTTACTACAACATACAAATAAATTTATCTGTCAAAAGTTTTTGAG
FD550794       <-- TATAAGTTACTACAACATACAAATAAATTTATCTGTCAAAAGTTTTTGAG
FD532272       <-- TATAAGTTACTACAACATACAAATAAATTTATCTGTCAAAAGTTTT-GAG
FD981572       <-- TATAAGTTACTACAACATACAAATAAATTTATCTGTCAAAAGTTTTTGAG
FY447696       <-- ..................................................
FY441624       <-- ..................................................
EV551307       <-- ..................................................
EV546428       --> TATAAGTTACTACAACATACAAATAAATTTATCTGTCAAAAGTTTTTGAG
EY925875       --> TATAAGTTACTACAACATACAAATAAATTTATCTGTCAAAAGTTTTTGAA
FD536768       --> TATAAGTTACTACAACATACAAATAAATTTATCTGTCAAAAGTTTTTGAG
FD937378       --> TATAAGTTACTACAACATACAAATAAATTTATCTGTCAAAAGTTTTTGAG
FY430641       --> TATAAGTTACTACAACATACAAATAAATTTATCTGTCAAAAGTTTTTGAG

               201    -    251
UN14103        --> CATCTTGTCATCTGAGACTCCATCAGCTACAAGCATCGCGGTTATCTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540225       <-- CATCTTGTCATCTGAGACTCCATCAGCTACAAGCATCGCGGTTATCTCCT
FD941829       <-- CATCTTGTCATCTGAGACTCCATCAGCTACAAGCATCGCGGTTATCTCCT
EY929447       <-- CATCTTGTCATCTGAGACTCCATCAGCTACAAGCATCGCGGTTATCTCCT
FD550794       <-- CATCTTGTCATCTGAGACTCCATCAGCTACAAGCATCGCGGTTATCTCCT
FD532272       <-- CATCT-GTCATCTGAGACTCCATCAGCTACAAGCATCGCGGTTATCTC-T
FD981572       <-- CATCTTATCATCTGAGACTCCATCAGCTACAAGCATCGCGGTTATCTCCT
FY447696       <-- ..................................................
FY441624       <-- ..................................................
EV551307       <-- ..................................................
EV546428       --> CATCTTGTCATCTGAGACTCCATCAGCTACAAGCATCGCGGTTATCTCCT
EY925875       --> CATCTTGT..........................................
FD536768       --> CATCTTGTCATCTGAGACTCCATCAGCTACAAGCATCGCGGTTATCTCCT
FD937378       --> CATCTTGTCATCTGAAACTCCATCAGCTACAAGCATCGCGGTTATCTCCT
FY430641       --> CATCTTGTCATCTGAGACTCCATCAGCTACAAGCATCGCGGTTATCTCCT

               251    -    301
UN14103        --> CAGCCATTTGTCTCTGTCCGCACAGCACCACTCCTGTGGCCTCAGGTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540225       <-- CAGCCATTTGTCTCTGTCCGCACAGCACCACTCCTGTGGCCTCAGGTTTT
FD941829       <-- CAGCCATTTGTCTCTGTCCGCATAGCACCACTCCTGTGGCCTCAGGTTTT
EY929447       <-- CAGCCATCTGTCTCTGTACGCACAGCACCACTCCTGTGGCCTCAGGTTTT
FD550794       <-- CAGCCATTTGTCTCTGTCCGCATAGCACCACTCCTGTGGCCTCAGGTTTT
FD532272       <-- CAGCCATTTGTCTCTGTCCGCACAGCACCACTC-TGTGGCCTCAGGTTTT
FD981572       <-- CAGCCATTTGTCTCTGTCCGCACAGCACCACTCCTGTGGCCTCAGGTTTT
FY447696       <-- ..................................................
FY441624       <-- ..................................................
EV551307       <-- ..................................................
EV546428       --> CAGCCATTTGTCTCTGTCCGCACAGCACCACTCCTGTGGCCTCAGGTTTT
EY925875       --> ..................................................
FD536768       --> CAGCCATTTGTCTCTGTCCGCACAGCACCACTCCTGTGGCCTCAGGTTTT
FD937378       --> CAGCCATTTGTCTCTGTCCGCATAGCACCACTCCTGTGGCCTCAGGTTTT
FY430641       --> CAGCCATTTGTCTCTGTCCGCACAGCACCACTCCTGTGGCCTCAGGTTTT

               301    -    351
UN14103        --> GAAACTTGTTTAGCCCTTGCAAAGGCAGCCTGGACATATCCGGTTTCCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540225       <-- GAAACTTGTTTAGCCCTTGCAAAGGCAGCCTGGACATATCCGGTTTCCCC
FD941829       <-- GAAACTTGTTTAGCCCTTGCAAAAGCAGCCTGGACATATCCGGTTTCCCC
EY929447       <-- GAAACTTGTTTAGCCCTTGCAAAGGCAGCCTGGACATATCCGGTTTCCCC
FD550794       <-- GAAACTTGTTTAGCCCTTGCAAAAGCAGCCTGGACATATCCGGTTTCCCC
FD532272       <-- GAAACTTGTTTAGCCCTTGCAAAGGCAGCCTGGACATATCCGGTTTCCCC
FD981572       <-- GAAACTTGTTTAGCCCTTGCAAAGGCAGCCTGGACATATCCGGTTTCCCC
FY447696       <-- .............CCCTTGCAAAGGCAGCCTGGACATATCCGGTTTCCCC
FY441624       <-- ..................................................
EV551307       <-- ..................................................
EV546428       --> GAAACTTGTTTAGCCCTTGCAAAGGCAGCCTGGACATATCCGGTTTCCCC
EY925875       --> ..................................................
FD536768       --> GAAACTTGTTTAGCCCTTGCAAAGGCAGCCTGGACATATCCGGTTTCCCC
FD937378       --> GAAACTTGTTTAGCCCTTGCAAAAGCAGCCTGGACATATCCGGTTTCCCC
FY430641       --> GAAACTTGTTTAGCCCTTGCAAAGGCAGCCTGGACATATCCGGTTTCCCC

               351    -    401
UN14103        --> TGTCCACCCATCATCTGGCTGTGATAATACAGGCACAACTTTGACACCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540225       <-- TGTCCACCCATCATCTGGCTGTGATAATACAGGCACAACTTTGACACCCG
FD941829       <-- TGTCCACCCATCATCTGGCTGCGATAATACAGGCACAACTTTGACACCCG
EY929447       <-- TGTCCACCCATCATCTGGCTGTGATAATACAGGCACAACTTTGACACCCG
FD550794       <-- TGTCCACCCATCATCTGGCTGTGATAATACAGGCACAACTTTGACACCCG
FD532272       <-- TGTCCACCCATCATCTGGCTGTGATAATACAGGCACAACTTTGACACCCG
FD981572       <-- TGTCCACCCATCATCTGGCTGTGATAATACAGGCACAACTT-GACACCCG
FY447696       <-- TGTCCACCCATCATCTGGCTGTGATAATACAGGCACAACTTTGACACCCG
FY441624       <-- ..................................................
EV551307       <-- ..................................................
EV546428       --> TGTCCACCCATCGTCTGGCTGTGATAATACAGGCACAACTTTGACACCCG
EY925875       --> ..................................................
FD536768       --> TGTCCACCCATCATCTGGCTGTGATAATACAGGCACAACTTTGACACCCG
FD937378       --> TGTCCACCCATCATCTGGCTGCGATAATACAGGCACAACTTTGACACCCG
FY430641       --> TGTCCACCCATCATCTGGCTGTGATAATACAGGCACAACTTTGACACCCG

               401    -    451
UN14103        --> ATGATTCCCACTCTTTAAACTTTTCCTGATAAGCCATTCTTTTCAGGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540225       <-- ATGATTCCCACTCTTTAAACTTTTCCCGATAAGCCATTCTTTTCATGTTC
FD941829       <-- ATGATTCCCACTCTTc..................................
EY929447       <-- ATGATTCCCACTCTTTAAACTTTTCCTGATAAGCCATTCTTTTCAGGTTC
FD550794       <-- ATGATTCCCACTCTTTAAACTTTTCCTGATAAGCCATTCTTTTCAGGTTC
FD532272       <-- ATGATTCCCACTCTTTAAACTTTTCCTGATAAGCCATTCTTTTCAGGTTC
FD981572       <-- ATGATTCCCACTCTTTAAACTTTTCCTGATAAGCCATTCTTTTCAGGTTC
FY447696       <-- ATGATTCCCACTCTTTAAACTTTTCCTGATAAGCCATTCTTTTCAGGTTC
FY441624       <-- ATGATTCCCACTCTTTAAACTTTTCCTGATAAGCCATTCTTTTCAGGTTC
EV551307       <-- .............................TAAGCCATTCTTTTCAGGTTC
EV546428       --> ATGATTCCCACTCTTTAAACTTTTCCTGATAAGCCATTCTTTTCAGGTTC
EY925875       --> ..................................................
FD536768       --> ATGATTCCCACTCTTTAAACTTTTCCCGATAAGCCATTCTTTTCATGTTC
FD937378       --> ATGATTCCCACTCTTc..................................
FY430641       --> ATGATTCCCACTCTTTAAACTTTTCCTGATAAGCCATTCTTTTCAGGTTC

               451    -    501
UN14103        --> CGAGCTCCATAATATAGTCTTACATCGGATCTTCTATCAGCGCCAAATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540225       <-- CTAGCCCCATAATAGAGTCTTACATCAGATCTTCTATCAGCGCCAAATCC
FD941829       <-- ..................................................
EY929447       <-- CGAGCTCCATAATATAGTCTTACATCGGATCTTCTATCAGCGCCAAATCC
FD550794       <-- CTAGCTCCGTAATAGAGTCTTACATCGGATCTT--CGCAGCGCCAAATCC
FD532272       <-- CGAGCTCCATAATATAGTCTTACATCGGATCTTCTATCAGCGCCAAATCC
FD981572       <-- CGAGCTCCATAATATAGTCTTACATCGGATCTTCTATCAGCGCCAAATCC
FY447696       <-- CGAGCTCCATAATATAGTCTTACATCGGATCTTCTATCAGCGCCAAATCC
FY441624       <-- CGAGCTCCATAATATAGTCTTACATCGGATCTTCTATCAGCGCCAAATCC
EV551307       <-- CGAGCTCCATAATATAGTCTTACATCGGATCTTCTATCAGCGCCAAATCC
EV546428       --> CGAGCTCCATAATATAGTCTTACATCGGATCTTCTATCAGCGCCAAATCC
EY925875       --> ..................................................
FD536768       --> CTAGCCCCATAATAGAGTCTTACATCAGATCTTCTATCAGCGCCAAATCC
FD937378       --> ..................................................
FY430641       --> CGAGCTCCATAATATAGTCTTACATCGGATCTTCTATCAGCGCCAAATCC

               501    -    551
UN14103        --> TGTCTCAATCAGTGAGCGGATGGGACTGATTCCAGATCCAGTGGCGAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540225       <-- TGTCTCAATTAGTGAGCGGATGGGACTGATTCCAGATCCAGTGGCGAAAA
FD941829       <-- ..................................................
EY929447       <-- TGTCTCAATCAGTGAGAGGATGGGACTGATTCCAGATCCAGTGGCGAAAA
FD550794       <-- TGTCTCAATCAGTGAGCGGATGGGACTGATTCCAGATCCAGTGGCGAAAA
FD532272       <-- TGTCTCAATCAGTGAGCGGATGGGACTGATTCCAGATCCAGTGGCGAAAA
FD981572       <-- TGTCTCAATCAGTGAGCGGATGGGACTGATTCCAGATCCAGTGGCGAAAA
FY447696       <-- TGTCTCAATCAGTGAGCGGATGGGACTGATTCCAGATCCAGTGGCGAAAA
FY441624       <-- TGTCTCAATCAGTGAGCGGATGGGACTGATTCCAGATCCAGTGGCGAAAA
EV551307       <-- TGTCTCAATCAGTGAGCGGATGGGACTGATTCCAGATCCAGTGGCGAAAA
EV546428       --> TGTCTCAATCAGTGAGCGGATGGGACTGATTCCAGATCCAGTGGCGAAAA
EY925875       --> ..................................................
FD536768       --> TGTCTCAATTAGTGAGCGGATGGGACTGATTCCAGATCCAGTGGCGAAAA
FD937378       --> ..................................................
FY430641       --> TGTCTCAATCAGTGAGCGGATGGGACTGATTCCAGATCCAGTGGCGAAAA

               551    -    601
UN14103        --> TCAAAACCGTGGGATACTCCTCGGGAGGATCAACCTGACCCATATCGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540225       <-- TCAAAACCGTGGGATACTCCTCGGGAGGATCAACCTGTCCCATATCGAAA
FD941829       <-- ..................................................
EY929447       <-- TCAAAACCGTGGGATACTCCTCGGGAGGATCAACCTGACCCATATCGAAA
FD550794       <-- TCAAAACCGTGGGATACTCCTCGGGAGGATCAACCTGACCCATATCGAAA
FD532272       <-- TCAAAACCGTGGGATACTCCTCGGGAGGATCAACCTGACCCATATCGAAA
FD981572       <-- TCAAAACCGTGGGATACTCCTCGGGAGGATCAACCTGACCCATATCGAAA
FY447696       <-- TCAAAACCGTGGGATACTCCTCGGGAGGATCAACCTGACCCATATCGAAA
FY441624       <-- TCAAAACCGTGGGATACTCCTCGGGAGGATCAACCTGACCCATATCGAAA
EV551307       <-- TCAAAACCGTGGGATACTCCTCGGGAGGATCAACCTGACCCATATCGAAA
EV546428       --> TCAAAACCGTGGGATACTCCTCGGGAGGATCAACCTGACCCATATCGAAA
EY925875       --> ..................................................
FD536768       --> TCAAAACCGTGGGATACTCCTCGGGAGGATCAACCTGTCCCATATCGAAA
FD937378       --> ..................................................
FY430641       --> TCAAAACCGTGGGATACTCCTCGGGAGGATCAACCTGACCCATATCGAAA

               601    -    651
UN14103        --> CCATTCCCCATCACAGCGCTAAGCTCGACGGTCTCCCCTCTCTTCAACCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540225       <-- CCATTCCCCATCACAGCGCTAAGCTCGACGGTCTCCCCTCTCTTCAACCC
FD941829       <-- ..................................................
EY929447       <-- CCATTCCCCATCACAGCGCTAAGCTCGTCGGTCTCCCCTCTCTTCAACCC
FD550794       <-- CCATTCCCCATCACAGCGCTAAGCTCGACGGTCTCCCCTCTCTTCAACCC
FD532272       <-- CCATTCCCCATCACAGCGCTAAGCTCGACGGTCTCCCCTCTCTTCAACCC
FD981572       <-- CCATTCCCCATCACAGCGCTAAGCTCGACGGTCTCCCCTCTCTTCAACCC
FY447696       <-- CCATTCCCCATCACAGCGCTGAGCTCGACGGTCTCCCCTCTCTTCAACCC
FY441624       <-- CCATTCCCCATCACAGCGCTGAGCTCGACGGTCTCCCCTCTCTTCAACCC
EV551307       <-- CCATTCCCCATCACAGCGCTAAGCTCGACGGTCTCCCCTCTCTTCAACCC
EV546428       --> CCATTCCCCATCACAGCGCTAAGCTCGACGGTCTCCCCTCTCTTCAACCC
EY925875       --> ..................................................
FD536768       --> CCATTCCCCATCACAGCGCTAAGCTCGACGGTCTCCCCTCTCTTCAACCC
FD937378       --> ..................................................
FY430641       --> CCATTCCCCATCACAGCGCTGAGCTCGACGGTCTCCCCTCTCTTCAACCC

               651    -    701
UN14103        --> GCACAGAACCTCCGCCGTGGATCCAGCTATACTCTTCACCAAGAACTCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540225       <-- GCACAGAATCTCCGCCGTGGATCCAGCTATACTCTTCACCA--AACTCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD941829       <-- ..................................................  Raphanus sativus var. oleiformis
EY929447       <-- GCACAGAACCTCCGCCGTGc..............................  Raphanus sativus var. oleiformis
FD550794       <-- GCACAGAACCTCCGCCGTGc..............................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532272       <-- GCACAGAACCTCCGCCGTGGATCCAGCTATACTCTTCACCAAGAACTCGA  Raphanus raphanistrum subsp. maritimus
FD981572       <-- GCACAGAACCTCCGCCGTGGATCCAGCTATACTCTTCACCAAGAACTCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY447696       <-- GCACAGAACCTCCGCCGTGGATCCAGCTATGCTCTTCACCAGGAACTCGA  Raphanus sativus cv GSK3-1
FY441624       <-- GCACAGAACCTCCGCCGTGGATCCAGCTATGCTCTTCACCAGGAACTCGA  Raphanus sativus cv GSK3-1
EV551307       <-- GCACAGAACCTCCGCCGTGGATCCAGCTATACTCTTCACCAAGAACTCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV546428       --> GCACAGAACCTCCGCCGTGGATCCAGCTATACTCTTCACCAAGAACTCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY925875       --> ..................................................  Raphanus sativus var. oleiformis
FD536768       --> GCACAGAATCTCCGCCGTGGATCCAGCTATACTCT...............  Raphanus raphanistrum subsp. raphanistrum (MS)
FD937378       --> ..................................................  Raphanus sativus var. oleiformis
FY430641       --> GCACAGAACCTCCGCCGTGGATCCAGCTATGCTCTTCACCAGGAACTCGA  Raphanus sativus cv GSK3-1

               701    -    751
UN14103        --> AAGCTCCTCGAGACGCCGCGAGCGAAGGAGGAGAGGCGATCGCCAGGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540225       <-- AAGCGCCGCGGGAAGCCGCGAGCGAAGGAGGAGATGCGATCGCCAGGAAC
FD941829       <-- ..................................................
EY929447       <-- ..................................................
FD550794       <-- ..................................................
FD532272       <-- AAGCTCCTCGAGACGCCGCGAGCGAAGGAGGAGAGGCGATCGCCAGGAAC
FD981572       <-- AAGCTCCTCGAGACGCCGCGAGCGAAGGAGGAGAGGCGATCGCCAGGAAC
FY447696       <-- AAGCTCCTCGAGACGCCGCGAGCGAAGGAGGAGAGGCGATCGCCAGGAAC
FY441624       <-- AAGCTCCTCGAGACGCCGCGAGCGAAGGAGGAGAGGCGATCGCCAGGAAC
EV551307       <-- AAGCTCCTCGAGACGCCGCGAGCGAAGGAGGAGAGGCGATCGCCAGGAAC
EV546428       --> AAGCTC............................................
EY925875       --> ..................................................
FD536768       --> ..................................................
FD937378       --> ..................................................
FY430641       --> AAGCTCCTCGAGACGCCGCGAGCGAAGGAGGAGAGGCGATCGCCAGGAAC

               751    -    801
UN14103        --> GAAGGCTTCTCGACGTCGGGGACGCGGAGCTGGAGGTACTGGCCGGGCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540225       <-- GAAGGCTTCTCGACc...................................
FD941829       <-- ..................................................
EY929447       <-- ..................................................
FD550794       <-- ..................................................
FD532272       <-- GAAGGCTTCTCGACGTCGGGGACGCGGAGCTGGAGGTACTGCCCGGGCCT
FD981572       <-- GAAGGCTTCTCGACGTCGGGGACGCc........................
FY447696       <-- GAAGGCTTCTCGACGTCGGGGACGCGGAGCTGGAGGTACTGGCCGGGCCG
FY441624       <-- GAAGGCTTCTCGACGTCGGGGACGCGGAGCTGGAGGTACTGGCCGGGCCG
EV551307       <-- GAAGGCTTCTCGACGTCGGGGACGCGGAGCTGGAGGTACTGCCCGGACCT
EV546428       --> ..................................................
EY925875       --> ..................................................
FD536768       --> ..................................................
FD937378       --> ..................................................
FY430641       --> GAAGGCTTCTCGACGTCGGGGACGCGGAGCTGGAGGTACTGGCCGGGCCG

               801    -    851
UN14103        --> CGTGTAGGAGGCGGCGAGATCCGGGGAGCCCGAGACGTCGATGGAGACGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540225       <-- ..................................................
FD941829       <-- ..................................................
EY929447       <-- ..................................................
FD550794       <-- ..................................................
FD532272       <-- CGTGTAGGAGGCGGCGAGATCCGGGGAGCCCGAGACGT---CGGAGACGT
FD981572       <-- ..................................................
FY447696       <-- CGTGTAGGAGGCGGCGAGATCCGGGGAGCCCGAGACGTCGATGGAGACGT
FY441624       <-- CGTGTAGGAGGCGGCGAGATCCGGGGAGCCCGAGACGTCGATGGAGACGT
EV551307       <-- CGTGTAGGAGGCGGCGAGATCCGGGGAGCCCGAGACGTCGATGGAGACGT
EV546428       --> ..................................................
EY925875       --> ..................................................
FD536768       --> ..................................................
FD937378       --> ..................................................
FY430641       --> CGTGTAGGAGGCGGCGAGATCCGGGGAGCCCGAGACGTCGATGGAGACGT

               851    -    901
UN14103        --> GGAAGAGCGATTCGGCGGCGGATTCGATCAGAGAGAGTGGAGCCGGGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540225       <-- ..................................................
FD941829       <-- ..................................................
EY929447       <-- ..................................................
FD550794       <-- ..................................................
FD532272       <-- GGAAGAGCGATTCGGCGGCGGATTCGATCAGAGAGAGTGGAGCCGGGGTC
FD981572       <-- ..................................................
FY447696       <-- GGAAGAGCGATTCGGCGGCGGATTCGATCAGAGAGAGTGGAGCCGGGGTC
FY441624       <-- GGAAGAGCGATTCGGCGGCGGATTCGATCAGAGAGAGTGGAGCCGGGGTC
EV551307       <-- GGAAGAGCGATTCGGCGGCGGATTCGATCAGAGAGAGTGGAGCCGGGGTC
EV546428       --> ..................................................
EY925875       --> ..................................................
FD536768       --> ..................................................
FD937378       --> ..................................................
FY430641       --> GGAAGAGCGATTCGGCGGCGGA............................

               901    -    951
UN14103        --> CAGAGGGCGGCGTCCTGGCGAACAGCCGCGGCGGTGACGACGGAGGCGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540225       <-- ..................................................
FD941829       <-- ..................................................
EY929447       <-- ..................................................
FD550794       <-- ..................................................
FD532272       <-- CAGAGGGCGGCGTCCTGGCGAAC...........................
FD981572       <-- ..................................................
FY447696       <-- CAGAGGGCGGCGTCCTGGCGAACAGCCGCGGCGGTGACGACGGAGGCGAC
FY441624       <-- CAGAGGGCGGCGTCCTGGCGAACAGCCGCGGCGGTGACGACGGAGGCGAC
EV551307       <-- CAGAGGGCGGCGTCCTGGCGAACCGCCGCGGCGGTGACGACGGAGGCGAC
EV546428       --> ..................................................
EY925875       --> ..................................................
FD536768       --> ..................................................
FD937378       --> ..................................................
FY430641       --> ..................................................

               951    -   1001
UN14103        --> GCGGTTGTTGCTGCGGGAGGAGGAGAAGCGGAGGCGGCGTGCGAGGGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540225       <-- ..................................................
FD941829       <-- ..................................................
EY929447       <-- ..................................................
FD550794       <-- ..................................................
FD532272       <-- ..................................................
FD981572       <-- ..................................................
FY447696       <-- GCGGTTGTTGCTGCGGGAGGAGGAGAAGCGGAGGCGGCGTGCGAGGGGGA
FY441624       <-- GCGGTTGTTGCTGCGGGAGGAGGAGAAGCGGAGGCGGCGTGCGAGGGGGA
EV551307       <-- GCGGTTGTTGGTGCGGGAGGAGGAGAAGCGGAGGTTGCGTGAGAGGGGGA
EV546428       --> ..................................................
EY925875       --> ..................................................
FD536768       --> ..................................................
FD937378       --> ..................................................
FY430641       --> ..................................................

               1001   -   1051
UN14103        --> GGCGGCGCAGGATAGACATGGAGGAGAGGGGGTGGCTAAACTGCGCATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540225       <-- ..................................................
FD941829       <-- ..................................................
EY929447       <-- ..................................................
FD550794       <-- ..................................................
FD532272       <-- ..................................................
FD981572       <-- ..................................................
FY447696       <-- GGCGGCGCAGGATAGACATGGAGGAGAGGGGGTGGCTAAACTGCGCATGG
FY441624       <-- GGCGGCGCAGGATAGACATGGAGGAGAGGGGGTGGCTAAACTGCGCATGG
EV551307       <-- GGCGGCGCAGGATAGACATGGAGGAGAGGGGGTGGCTAAACTGCGCATGG
EV546428       --> ..................................................
EY925875       --> ..................................................
FD536768       --> ..................................................
FD937378       --> ..................................................
FY430641       --> ..................................................

               1051   -   1101
UN14103        --> GTGGTGGTGGTGATGGAAGGGGAGAATGAGAGAGTGGACATGGTGGAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540225       <-- ..................................................
FD941829       <-- ..................................................
EY929447       <-- ..................................................
FD550794       <-- ..................................................
FD532272       <-- ..................................................
FD981572       <-- ..................................................
FY447696       <-- GTGGTGGTGGTGATGGAAGGGGAGAATGAGAGAGTGGACATGGTGGAGGA
FY441624       <-- GTGGTGGTGGTGATGGAAGGGGAGAATGAGAGAGTGGACATGGTGGAGGA
EV551307       <-- GTGGTGGTTGTGATGGAAGGGGAGAATGAGAGAGTGGACATGGTGGAAGA
EV546428       --> ..................................................
EY925875       --> ..................................................
FD536768       --> ..................................................
FD937378       --> ..................................................
FY430641       --> ..................................................

               1101   -   1151
UN14103        --> GTTTTGTCTTTTT--GGGCTTATTTGACCGTTCCGGCGGTAGAAAATGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540225       <-- ..................................................
FD941829       <-- ..................................................
EY929447       <-- ..................................................
FD550794       <-- ..................................................
FD532272       <-- ..................................................
FD981572       <-- ..................................................
FY447696       <-- GTTTTGTCTTTTT--GGGCTTATTTGACCGT-CCGGCGGTAGAAAATGcg
FY441624       <-- GTTTTGTCTTTTT--GGGCTTATTTGACCGTTCCGGCGGTAGAAAATGGC
EV551307       <-- GTTTTGTTTTTTTTTGGGCTTATTTGACTGTTCCGGCGGTAGAAAATGGC
EV546428       --> ..................................................
EY925875       --> ..................................................
FD536768       --> ..................................................
FD937378       --> ..................................................
FY430641       --> ..................................................

               1151   -   1201
UN14103        --> GGCCCGATTTGTTCGGTGGCACGAGGAGTGTCTTTTTTTCTTTCTAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540225       <-- ..................................................
FD941829       <-- ..................................................
EY929447       <-- ..................................................
FD550794       <-- ..................................................
FD532272       <-- ..................................................
FD981572       <-- ..................................................
FY447696       <-- cc................................................
FY441624       <-- GGCCCGATTTGTTCGGTGGCACGAGGAGTGTCTTTTTTTCTTTCTAAACA
EV551307       <-- GGCCCcc...........................................
EV546428       --> ..................................................
EY925875       --> ..................................................
FD536768       --> ..................................................
FD937378       --> ..................................................
FY430641       --> ..................................................

               1201   -   1251
UN14103        --> CCTAAATTTGGATGAGGTCGTATGTTATGCCACGTGGACGCTCAAGATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD540225       <-- ..................................................
FD941829       <-- ..................................................
EY929447       <-- ..................................................
FD550794       <-- ..................................................
FD532272       <-- ..................................................
FD981572       <-- ..................................................
FY447696       <-- ..................................................
FY441624       <-- CCTAAATTTGGATGAGGTCGTATGTTATGCCACGTGGACGCTCAAGATAT
EV551307       <-- ..................................................
EV546428       --> ..................................................
EY925875       --> ..................................................
FD536768       --> ..................................................
FD937378       --> ..................................................
FY430641       --> ..................................................

               1251   -   1301
UN14103        --> GGTTTGCTATCCTCTTCTTT
                   ~~~~~~~~~~~~~~~~~~~~
FD540225       <-- ....................
FD941829       <-- ....................
EY929447       <-- ....................
FD550794       <-- ....................
FD532272       <-- ....................
FD981572       <-- ....................
FY447696       <-- ....................
FY441624       <-- GGTTTGCTATCCTCTTCTTT
EV551307       <-- ....................
EV546428       --> ....................
EY925875       --> ....................
FD536768       --> ....................
FD937378       --> ....................
FY430641       --> ....................