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Alignment for radish unigene UN14107

               1      -     51
UN14107        --> CGGAAAAAAATAATAATATTCAATTGAGAAATGTTTTGATAAGTTACAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566747       <-- ..................................................
FD548994       <-- ..................................................
FD964550       <-- ..................................................
EV552518       <-- ..................................................
FD545101       --> CGGAAAAAAATAATAATATTCAATTGAGAAATGTTTTGATAAGTTACAAA
FD967242       --> ..GAAAAAAATAATAATATTCAATTGAGAAATGTTTTGATAAGTTACAAA
EV571805       --> ..................................................
EX777646       --> ..................................................

               51     -    101
UN14107        --> AAAATAGAGACAAACACCAAATGACTAACAAGATAGATATACATCATTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566747       <-- ..................................................
FD548994       <-- ..................................................
FD964550       <-- ..................................................
EV552518       <-- ..................................................
FD545101       --> AAAATAAAGACAAACACCAAATGACTAACAAGATAAATATACATCATTTT
FD967242       --> AAAATAGAGACAAACACCAAATGACTAACAAGATAGATATACATCATTTT
EV571805       --> ..................................................
EX777646       --> ..................................................

               101    -    151
UN14107        --> GTTTATACTTTTATTCAAAGCCAAAGAAGAATAACAGAAAGCAACAAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566747       <-- ...............CAAAGCCAAAGAAGAATAACAGAA-GCAACAAAGT  Raphanus raphanistrum subsp. landra
FD548994       <-- .........................GAAGAATAACAGAAAGCAA-AAAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964550       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV552518       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD545101       --> GTTTATACTTTTATTCAAAGCCAAAGAAAAATAACAGAAAGCAA-AAAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD967242       --> GTTTATACTTTTATTCAAAGCCATAGAAGAATAACAGAAA-C-ACAAAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV571805       --> ...............CAAAGCCAAAGAAGAATAACAGAA-GCAACAAAGT  Raphanus raphanistrum subsp. landra
EX777646       --> ...............CAAAGCCAAAGAAGAATAACAGAA-GCAACAAAGT  Raphanus raphanistrum subsp. landra

               151    -    201
UN14107        --> TTGAGAGAGA--TAAAATACACAAAAAACA-AAAAAAGAAGATCCCACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566747       <-- TTGAGAGAGA--TAAAATACACAAAAAAAACAAAAAAGAAGATCCCACAT
FD548994       <-- TTGAGAGAGA--TAAAATACACAAAAAACA-AAAAAAGAAGATCCCACAT
FD964550       <-- ..................................................
EV552518       <-- ..................................................
FD545101       --> TTGAGAGAGA--TAAAATACACAAAAAACA-AAAAAAGAAGATCCCACAT
FD967242       --> TTGAGAGAGAGATAAAATACACAAAAAACA-AAAAA-GAA-ATCCCACAT
EV571805       --> TTGAGAGAGA--TAAAATACACAAAAAAAC-AAAAAAGAAGATCCCACAT
EX777646       --> TTGAGAGAGA--TAAAATACACAAAAAA-A-CAAAAAGAAGATCCCACAT

               201    -    251
UN14107        --> AAGATAATCACATAACTATCTCTGGCTTCAAGATGTTGGATTTGATCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566747       <-- A-GATAATCACATAACTATCTCTGGCTTCAAGATGTTGGATTTGATCTCC  Raphanus raphanistrum subsp. landra
FD548994       <-- AAGATAATCACATAACTATCTCTGGCTTCAAGATGTTGGATTTGATCTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964550       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV552518       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD545101       --> AAGATAATCACATAACTATCTCTGGCTTCAAGATGTTGGATTTGATCTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD967242       --> AAGATAATCACATAACTATCTCTGGCTTCAAGATGTTGGATTTGATCTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV571805       --> A-GATAATCACATAACTATCTCTGGCTTCAAGATGTTGGATTTGATCTCC  Raphanus raphanistrum subsp. landra
EX777646       --> A-GATAATCACATAACTATCTCTGGCTTCAAGATGTTGGATTTGATCTCC  Raphanus raphanistrum subsp. landra

               251    -    301
UN14107        --> TTGTGTGGCAAAACAACCCCTCCATTGGTGTATATCTCATCCCCAACATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566747       <-- TTGTGTGGCAAAACAACCCCTCCATTGGTGTATATCTCATCCCCAACATG
FD548994       <-- TTGTGTGGCAAAACAACCCCTCCATTGGTGTATATCTCATCCCCAACATG
FD964550       <-- ..................................................
EV552518       <-- ..................................................
FD545101       --> TTGTGTGGCAAAACAACCCCTCCATTGGTGTATATCTCATCCCCAACATG
FD967242       --> TTGTGTGGCAAAACAACCCCTCCATTGGTGTATATCTCATCCCCAACATG
EV571805       --> TTGTGTGGCAAAACAACCCCTCCATTGGTGTATATCTCATCCCCAACATG
EX777646       --> TTGTGTGGCAAAACAACCCCTCCATTGGTGTATATCTCATCCCCAACATG

               301    -    351
UN14107        --> AACATCTTCCCCCAAGATCGTCATGTTCTCAATCCTAGCCCACTGCCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566747       <-- AACATCTTCCCCCAAGATCGTCATGTTCTCAATCCTAGCCCACTGCCCAA
FD548994       <-- AACATCTTCCCCCAAGATCGTCATGTTCTCAATCCTAGCCCACTGCCCAA
FD964550       <-- ....................................AGCCCACTGCCCAA
EV552518       <-- ..................................................
FD545101       --> AACATCTTCCCCCAAGATCGTCATGTTCTCAATCCTAGCCCACTGCCCAA
FD967242       --> AACATCTTCCCCCAAGATCGTCATGTTCTCAATCCTAGCCCACTGCCCAA
EV571805       --> AACATCTTCCCCCAAGATCGTCATGTTCTCAATCCTAGCCCACTGCCCAA
EX777646       --> AACATCTTCCCCCAAGATCGTCATGTTCTCAATCCTAGCCCACTGCCCAA

               351    -    401
UN14107        --> CCGTTGAGTGCCACCCTACGATACTGCTCGAGACACACGCATGCTTCTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566747       <-- CCGTTGAGTGCCACCCTACGATACTGCTCGAGACACACGCATGCTTCTTA
FD548994       <-- CCGTTGAGTGCCACCCTACGATACTGCTCGAGACACACGCATGCTTCTTA
FD964550       <-- CCGTTGAGTGCCACC-TACGATACTGCTCGAGACACACGCATGCTTCTTG
EV552518       <-- ..................................................
FD545101       --> CCGTTGAGTGCCACCCTACGATACTGCTCGAGACACACGCATGCTTCTTA
FD967242       --> CCGTTGAGTGCCACCCTACGATACTGCTC.....................
EV571805       --> CCGTTGAGTGCCACCCTACGATACTGCTCGAGACACACGCATGCTTCTTA
EX777646       --> CCGTTGAGTGCCACCCTACGATACTGCTCGAGACACACACATGCTTCTTA

               401    -    451
UN14107        --> ATCCTTGCCCCACGCATGACCGTGCACCGTGAAAGCCTCACCCCTGACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566747       <-- ATCCTTGCCTCACGCATGACCGTGCATCGCGAAAGCCTC...........  Raphanus raphanistrum subsp. landra
FD548994       <-- ATCCTTGCCCCACGCATGACCGTGCACCGTGAAAGCCTCACCCCTGACTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964550       <-- ATCCTTGCCCCACGCATGACCGTGCACCGTGAAAGCCTAACCCCTGACTC  Raphanus raphanistrum subsp. maritimus
EV552518       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD545101       --> ATCCTTGCCCCACGCATGACCGTGCACCGTGAAAGCCTCACCCCTGACTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD967242       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV571805       --> ATCCTTGCCTCACGCATGACCGTGCATCGCGAAAGCCTCACCCCTGACTC  Raphanus raphanistrum subsp. landra
EX777646       --> ATCCTTGCCCCACGCATGACCGTGCACCGCGAAAGCCTCACCCCTGACTC  Raphanus raphanistrum subsp. landra

               451    -    501
UN14107        --> AACAACGCATCCTGGACCAATGGCCACGTCTGGTCCTATCAAACACCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566747       <-- ..................................................
FD548994       <-- AACAACGCATCCTGGACCAATGGCCACATCTGGTCCTATCAAACACCCTT
FD964550       <-- AACAACGCATCCTGGACCAATGGCCACGTCTGGTCCTATCAAACACCCTT
EV552518       <-- ..................................................
FD545101       --> AACAACGCATCCTGGACCAATGGCCACATCTGGTCCTATCAAACACCCTT
FD967242       --> ..................................................
EV571805       --> AACAACGCATCCCGGACCAATGGCCACGTCTGGTCCTATCAAACACCCTT
EX777646       --> AACAACGCATCCCGGACCAATGGCCACGTCTGGTCCTATCAAACACCCTT

               501    -    551
UN14107        --> CCCCAATCTTAGCGGTTTCATCCACCAGAACATTCCCAACGATGTGTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566747       <-- ..................................................
FD548994       <-- CCCCAATCTTAGCGGTTTCATCCACCAGAACATTCCCAACGATGTGTGCA
FD964550       <-- CCCCAATCTTAGCGGTTTCATCCACCAGAACATTCCCAACGATGTGTGCA
EV552518       <-- ..................................................
FD545101       --> CCCCAATCTTAGCGGTTTCATCCACCAGAACATTCCCAACGATGTGTGCA
FD967242       --> ..................................................
EV571805       --> CCCCAATCTTAGCGGTTTCATCGACCAGAACATTCCCAACGATGTGTGCA
EX777646       --> CCCCAATCTTAGCGGTTTCATCGACCAGAACATTCCCAACGATGTGTGCA

               551    -    601
UN14107        --> CCAGTGGTTAGCTTGGCAGGAGATTTCTTCCTCAGAGAGTCTAAGTAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566747       <-- ..................................................
FD548994       <-- CCAGTGGTTAGCTTGGCAGGAGATTTCTTCCTCAGAGAGTCTAAGTAGAG
FD964550       <-- CCAGTGGTTAGCTTGGCAGGAGACTTCTTCCTCAGAGAGTCTAAGTAGAG
EV552518       <-- ..................................................
FD545101       --> CC................................................
FD967242       --> ..................................................
EV571805       --> CCAGTGGTCAGCTTGGCAGGAGATTTCTTCCTCAGAGAGTCTAAGTAGAG
EX777646       --> CCAGTGGTCAGCTTGGCAGGAGATTTCTTCCCCAGAGAGTCTAAGTAGAG

               601    -    651
UN14107        --> TCTCAGGCCGGTTATGTAGTCCTTGGGTTGTCCAATGTCCATCCAGAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566747       <-- ..................................................
FD548994       <-- TATCAGGCCCGTTATGTAGTCCTTGGGCTGTCCAATGTCCATCCAGAATC
FD964550       <-- TCTCAGGCCGGTTATGTAGTCCTTGGGTTGTCCAATGTCCATCCAGAATC
EV552518       <-- ..................................................
FD545101       --> ..................................................
FD967242       --> ..................................................
EV571805       --> TCTCAGGACCGTTATGTAGTCCTTGGGTTGTCCAATGTCCATCCAGAATC
EX777646       --> TCTCAGGCCCGTTATGTAGTCCTTGGGTTGTCCAATGTCCATCCAGAATC

               651    -    701
UN14107        --> CAGGTAGCACCATGGCGTAGAGCCCTTGAGCTGCTGCAATCTTGGGGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566747       <-- ..................................................
FD548994       <-- CTGGTAGAACCATGGCGTAGAGCCCTTGAGCTGCTGCAATCTTGc.....
FD964550       <-- CAGGTAGCACCATGGCGTAGAGCCCTTGAGCTGCTGCAATCTTGGGGAAG
EV552518       <-- ..................................................
FD545101       --> ..................................................
FD967242       --> ..................................................
EV571805       --> CAGGTAGCACCATGGCGTAAAGCCCTTGAGCTGCTGCAATCTTGGGGAAG
EX777646       --> CAGGTAGCACCATGGCGTAGAGCCCTTGAGCTGCTGCAATCTTGGGGAAG

               701    -    751
UN14107        --> GTCTCTTTCTCGATCGATGTTGGTCTTAGCTCAATCTT-GTCGAGAACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566747       <-- ..................................................
FD548994       <-- ..................................................
FD964550       <-- GTCTCTTTCTCGATCGATGTTGGTCTTAGCTCGATCTT-GTCGAGAACCG
EV552518       <-- ..................................................
FD545101       --> ..................................................
FD967242       --> ..................................................
EV571805       --> GTCTCTTTCTCGATCGATGTTGGTCTTAGCTCAATCTT-GTCGAGAACC.
EX777646       --> -TCTCTTTCTCGATCGATGTTGGTCTTAGCTCAATCTTTGTCGAGAAC-G

               751    -    801
UN14107        --> ATGGGTTTAGAAGGTAGATCCCAGCGTTGATCTTGTTGCCTACAAACAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566747       <-- ..................................................
FD548994       <-- ..................................................
FD964550       <-- ATGGGTTTAGAAGGTAGATCCCAGCGTTGATCTTGTTGCCTACAAACAGT
EV552518       <-- ...........................................AAACAGT
FD545101       --> ..................................................
FD967242       --> ..................................................
EV571805       --> ..................................................
EX777646       --> ATGGGT............................................

               801    -    851
UN14107        --> TTTGGCTTCTCCACAAACTTCTCAACTTTTCCTGTAGTTTCATCCATGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566747       <-- ..................................................
FD548994       <-- ..................................................
FD964550       <-- TTTGGCTTCTCCACAAACTTCTCAACTTTTCCTGTAGCTTCATCCATGAC
EV552518       <-- TTTGGCTTCTCCACAAACTTCTCAACTTTTCCTGTAGTTTCATCCATGAC
FD545101       --> ..................................................
FD967242       --> ..................................................
EV571805       --> ..................................................
EX777646       --> ..................................................

               851    -    901
UN14107        --> AACAACTCCATACTTGGACGGTTCATCAACCTTTGTCACCATAATGGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566747       <-- ..................................................
FD548994       <-- ..................................................
FD964550       <-- AACAACTCCATACTTGGACGGTTCATCAACCTTTGTCACCATAATGGAGG
EV552518       <-- AACAACTCCATACTTGGACGGTTCATCAACCTTTGTCACCATAATGGAGG
FD545101       --> ..................................................
FD967242       --> ..................................................
EV571805       --> ..................................................
EX777646       --> ..................................................

               901    -    951
UN14107        --> CTTCACCACCGTGAGCTTTGTGAAACTCAATCATCTCTTTGAGAGGGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566747       <-- ..................................................
FD548994       <-- ..................................................
FD964550       <-- CTTCACCACCGTGAGCTTTGTGAAACTCAATCATCTCTTTGAGAGGGTAC
EV552518       <-- CTTCACCACCGTGAGCTTTGTGAAACTCAATCATCTCTTTGAGAGGGTAC
FD545101       --> ..................................................
FD967242       --> ..................................................
EV571805       --> ..................................................
EX777646       --> ..................................................

               951    -   1001
UN14107        --> TCACTGATCACATCACTGTTGAGGACAAAGAAGGGCTCTCCAGATCCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566747       <-- ..................................................
FD548994       <-- ..................................................
FD964550       <-- TCACTGATCACATCACTGTTGAGGACAAAGAAGGGCTCGCCAGATCCATC
EV552518       <-- TCACTGATCACATCACTGTTGAGGACAAAGAAGGGCTCTCCAGATCCATC
FD545101       --> ..................................................
FD967242       --> ..................................................
EV571805       --> ..................................................
EX777646       --> ..................................................

               1001   -   1051
UN14107        --> AACCAGTTTGTCTCTAGCTAGAGCCAGAGGACCAGCCGTACCCATAGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566747       <-- ..................................................
FD548994       <-- ..................................................
FD964550       <-- AACCc.............................................
EV552518       <-- AACCAGTTTGTCTCTAGCTAGAGCCAGAGGACCAGCCGTACCCATAGGCT
FD545101       --> ..................................................
FD967242       --> ..................................................
EV571805       --> ..................................................
EX777646       --> ..................................................

               1051   -   1101
UN14107        --> CAGTCTCTTGTGAGCAAGTGATTTTGATTTCGAGCTTTGCCTCAAAGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566747       <-- ..................................................
FD548994       <-- ..................................................
FD964550       <-- ..................................................
EV552518       <-- CAGTCTCTTGTGAGCAAGTGATTTTGATTTCGAGCTTTGCCTCAAAGTCT
FD545101       --> ..................................................
FD967242       --> ..................................................
EV571805       --> ..................................................
EX777646       --> ..................................................

               1101   -   1151
UN14107        --> TTCAAGAAGTTAAGCATCACCTCTGGTTGGTAATTGATGGCCAAAACCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566747       <-- ..................................................
FD548994       <-- ..................................................
FD964550       <-- ..................................................
EV552518       <-- TTCAAGAAGTTAAGCATCACCTCTGGTTGGTAATTGATGGCCAAAACCAC
FD545101       --> ..................................................
FD967242       --> ..................................................
EV571805       --> ..................................................
EX777646       --> ..................................................

               1151   -   1201
UN14107        --> TTCGTCAACTCCAACTGCCTTGAGTGCCTCTATCTGATGAAGGATCATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566747       <-- ..................................................
FD548994       <-- ..................................................
FD964550       <-- ..................................................
EV552518       <-- TTCGTCAACTCCAACTGCCTTGAGTGCCTCTATCTGATGAAGGATCATGG
FD545101       --> ..................................................
FD967242       --> ..................................................
EV571805       --> ..................................................
EX777646       --> ..................................................

               1201   -   1251
UN14107        --> GTTTGTTAGCAAAGTCAACAAGGGGCTTTGGGAAACTGAGAGTCAACGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566747       <-- ..................................................
FD548994       <-- ..................................................
FD964550       <-- ..................................................
EV552518       <-- GTTTGTTAGCAAAGTCAACAAGGGGCTTTGGGAAACTGAGAGTCAACGGT
FD545101       --> ..................................................
FD967242       --> ..................................................
EV571805       --> ..................................................
EX777646       --> ..................................................

               1251   -   1301
UN14107        --> CTCAAGCGAGTCCCGAACCCACCGACAAGAATGAGAGCCTTCATCTTCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566747       <-- ..................................................
FD548994       <-- ..................................................
FD964550       <-- ..................................................
EV552518       <-- CTCAAGCGAGTCCCGAACCCACCGACAAGAATGAGAGCCTTCATCTTCTA
FD545101       --> ..................................................
FD967242       --> ..................................................
EV571805       --> ..................................................
EX777646       --> ..................................................

               1301   -   1351
UN14107        --> GGACTCAAACTACACTCTTTCAATTCCTTTTGCCTGAAATTCAGTTGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566747       <-- ..................................................
FD548994       <-- ..................................................
FD964550       <-- ..................................................
EV552518       <-- GGACTCAAACTACACTCTTTCAATTCCTTTTGCCTGAAATTCAGTTGCTT
FD545101       --> ..................................................
FD967242       --> ..................................................
EV571805       --> ..................................................
EX777646       --> ..................................................

               1351   -   1401
UN14107        --> GATTAGACAATTCAACACAAACCCCAACAGCTGTCAAAAATGTTTGAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566747       <-- ..................................................
FD548994       <-- ..................................................
FD964550       <-- ..................................................
EV552518       <-- GATTAGACAATTCAACACAAACCCCAACAGCTGTCAAAAATGTTTGAATC
FD545101       --> ..................................................
FD967242       --> ..................................................
EV571805       --> ..................................................
EX777646       --> ..................................................

               1401   -   1451
UN14107        --> ACGTCATTAACATAATCAAAAATCTCAGCTTAAATCCAGATCGGTCACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566747       <-- ..................................................
FD548994       <-- ..................................................
FD964550       <-- ..................................................
EV552518       <-- ACGTCATTAACATAATCAAAAATCTCAGCTTAAATCCAGATCGGTCACCA
FD545101       --> ..................................................
FD967242       --> ..................................................
EV571805       --> ..................................................
EX777646       --> ..................................................

               1451   -   1501
UN14107        --> GTATATTCAAGATTTAAACCCAAATAAATGAATCCGCAAAAACCCACAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566747       <-- ..................................................
FD548994       <-- ..................................................
FD964550       <-- ..................................................
EV552518       <-- GTATATTCAAGATTTAAACCCAAATAAATGAATCCGCAAAAACCCACAAG
FD545101       --> ..................................................
FD967242       --> ..................................................
EV571805       --> ..................................................
EX777646       --> ..................................................

               1501   -   1551
UN14107        --> AATTCAAATCAAACTCAAAGAAAGGACATGCAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV566747       <-- ...................................
FD548994       <-- ...................................
FD964550       <-- ...................................
EV552518       <-- AATTCAAATCAAACTCAAAGAAAGGACATGCAACC
FD545101       --> ...................................
FD967242       --> ...................................
EV571805       --> ...................................
EX777646       --> ...................................