RadishBase

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Alignment for radish unigene UN14132

               1      -     51
UN14132        --> GGATCCACATTATACCATTCACCAATCTCTAGCCAATAGTCACACACAC-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY428390       <-- ..................................................
FY428176       <-- ..................................................
FY432668       <-- ..................................................
FY431135       <-- ..................................................
FD538276       <-- ..................................................
FD968067       <-- ..................................................
EY914431       --> GGATCCACATTATACCATTCACCAATCTCTAGCCAATAGTCACACACAT-
EY906457       --> ......ggatagTACCATTCACCAATCTCTAGTCAATAGTCACACACAC-
FD971847       --> ......ggatagTACCATTCACCAATCTCTAGCCAATAGTCACACACAC-
EY948743       --> ...........ggACCATTCACCAATCTCTAGCCAATAGTCACACACAC-
FD542285       --> .............agCATTCACCAATCTCTAGCCAATAGTCACACACACA
EX756618       --> .............gggATTCACCAATCTCTAGCCAATAGTCACACACAC-
FD548524       --> ..............ggATTCACCAATCTCTAGCCAATAGTCACACACAT-
EX756836       --> .....................ggAATCTCTAGCCAATAGTCACACACACA
FD542139       --> .....................ggAATCTCTAGCCAATAGTCACACACAC-
FD549298       --> ..........................ggCTAGCCAATAGTCACACACAT-
FY435805       --> .....................................AGTCACACACAC-
EY908294       --> ................................gggtcacaCACACACAC-
FD972100       --> .......................................ggACACACAC-
FD972171       --> .......................................ggACACACAC-
FY437462       --> ............................................CACAC-
EW734095       --> ..................................................
FD540168       --> ..................................................
EY898782       --> ..................................................
EX906030       --> ..................................................

               51     -    101
UN14132        --> ---TCACAATGGCCACCG---TCGCTAACTTCTCAGCCAAACCAATCACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY428390       <-- ..................................................
FY428176       <-- ..................................................
FY432668       <-- ..................................................
FY431135       <-- ..................................................
FD538276       <-- ..................................................
FD968067       <-- ..................................................
EY914431       --> ---TCACAATGGCCACCG---TCGCAAACTTCTCAGCCAAACCAATCACC
EY906457       --> ---TCACAATGGCCACCG---TCGCTAACTTCTCAACCAAACCAATCACC
FD971847       --> ---TCACAATGGCCACCG---TCGCTAACTTCTCAGCCAAACCAATCACC
EY948743       --> ---TCACAATGGCCACCG---TCGCTAACTTCTCAGCCAAACCAATCACC
FD542285       --> CACTCACAATGGCCACCGCCGTCGCTAACTTCTCAGCCAAACCAATCACC
EX756618       --> ---TCACAATGGCCACCG---TCGCTAACTTCTCAGCCAAACCAATCACC
FD548524       --> ---TCACAATGGCCACCG---TCGCAAACTTCTCAGCCAAACCAATCACC
EX756836       --> CACTCACAATGGCCACCGCCGTCGCTAACTTCTCAGCCAAACCAATCACC
FD542139       --> ---TCACAATGGCCACCG---TCGCTAACTTCTCAGCCAAACCAATCACC
FD549298       --> ---TCACAATGGCCACCG---TCGCAAACTTCTCAGCCAAACCAATCACC
FY435805       --> ---TCACAATGGCCACCG---TCGCTAACTTCTCAGCCAAACCAATCACC
EY908294       --> ---TCACAATGGCCACCGCCGTCGCTAACTTCTCAGCCAAACCAATCACC
FD972100       --> ---TCACAATGGCCACCG---TCGCTAACTTCTCAGCCAAACCAATCACC
FD972171       --> ---TCACAATGGCCACCG---TCGCTAACTTCTCAGCCAAACCAGTCACC
FY437462       --> ---TCACAATGGCCACCG---TCGCTAACTTCTCAGCCAAACCAATCACC
EW734095       --> .........gGGCCACCG---TCGCTAACTTCTCAGCTAAACCAATCACC
FD540168       --> ..................................................
EY898782       --> ..................................................
EX906030       --> ..................................................

               101    -    151
UN14132        --> ACCGTGATTCCACGGCTGTCATCCGCCGTTGCCTCCACCTCCTCCTTCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY428390       <-- ..................................................  Raphanus sativus cv GSK3-1
FY428176       <-- ..................................................  Raphanus sativus cv GSK3-1
FY432668       <-- ..................................................  Raphanus sativus cv GSK3-1
FY431135       <-- ..................................................  Raphanus sativus cv GSK3-1
FD538276       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968067       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY914431       --> ACCGTGATTCCACGGCTGTCATCCGCCGTTGCCTCCACCTCCTCCTTCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906457       --> ACCGTGATTCCACGGCTGTCATCCGCCGTTGCCTCCACCTCCTCCTTCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971847       --> ACCGTGATTCCACGGCTGTCATCCGCCGTTGCCTCCACCTCCTCCTTCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY948743       --> ACCGTGATTCCACGGCTGTCATCCGCCATTGCCTCCACCTCCTCCTTCGT  Raphanus sativus cv Rat-Tail Radish #3870
FD542285       --> ACCGTGATTCCACGGCTGTCATCCGCCGTTGCCTCCACCTCCTCCTTCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX756618       --> ACCGTGATTCCACGGCTGTCATCCGCCGTTGCCTCCACCTCCTCCTTCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD548524       --> ACCGTGATTCCACGGCTGTCATCCGCCGTTGCCTCCACCTCCTCCTTCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX756836       --> ACCGTGATTCCACGGCTGTCATCCGCCGTTGCCTCCACCTCCTCCTTCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542139       --> ACCGTGATTCCACGGCTGTCATCCGCCGTTGCCTCCACCTCCTCCTTCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549298       --> ACCGTGATTCCACGGCTGTCATCCGCCGTTGCCTCCACCTCCTCCTTCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY435805       --> ACCGTGATTCCACGGCTGTCATCCGCCATTGCCTCCACCTCCTCCTTCGT  Raphanus sativus cv GSK3-1
EY908294       --> ACCGTGATTCCACGGCTGTCATCCGCCGTTGCCTCCACCTCCTCCTTCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972100       --> ACCGTGATTCCACGGCTGTCATCCGCCGTTGCCTCCACCTCCTCCTTCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972171       --> ACCGTGATTCCACGGCTGTCATCCGCCGTTGCCTCCACCTCCTCCTTCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY437462       --> ACCGTGATTCCACGGCTGTCATCCGCCATTGCCTCCACCTCCTCCTTCGT  Raphanus sativus cv GSK3-1
EW734095       --> ACCGTGATTCCACGGCTGTCATCCGCCATTGCCTCCACCTCCTCCTTCGT  Raphanus sativus cv Rat-Tail Radish #3870
FD540168       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY898782       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX906030       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               151    -    201
UN14132        --> ATTCTTCGACCCCAAACCCAACTCACTGATCCTAAAACAGAGCTGGGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY428390       <-- .................................................A
FY428176       <-- ..................................................
FY432668       <-- ..................................................
FY431135       <-- ..................................................
FD538276       <-- ..................................................
FD968067       <-- ..................................................
EY914431       --> ATTCTTCGACCCCAAACCCAACTCACTGATCCTAAAACAGAGCTGGGTTA
EY906457       --> ATTCATCGACCCCAAACCCAACTCACTGATCCTAAAACAGAGCTGGGTTA
FD971847       --> ATTCATCGACCCCAAACCCAACTCACTGATCCTAAAACAGAGCTGGGTTA
EY948743       --> ATTCTTCGACCCCAAACCCAACTCACTGATCCTAAAACAGAGCTGGGTTA
FD542285       --> ATTCTTCGACCCCAAACCCAACTCACTGATCCTAAAACAGAGCTGGGTTA
EX756618       --> ATTCATCGACCCCAAACCCAACTCACTGATCCTAAAACAGAGCTGGGTTA
FD548524       --> ATTCTTCGACCCCAAACCCAACTCACTGATCCTAAAACAGAGCTGGGTTA
EX756836       --> ATTCTTCGACCCCAAACCCAACTCACTGATCCTAAAACAGAGCTGGGTTA
FD542139       --> ATTCATCGACCCCAAACCCAACTCACTGATCCTAAAACAGAGCTGGGTTA
FD549298       --> ATTCTTCGACCCCAAACCCAACTCACTGATCCTAAAACAGAGCTGGGTTA
FY435805       --> ATTCTTCGACCCCAAACCCAACTCACTGATCCTAAAACAGAGCTGGGTTA
EY908294       --> ATTCTTCGACCCCAAACCCAACTCACTGATCCTAAAACAGAGCTGGGTTA
FD972100       --> ATTCATCGACCCCAAACCCAACTCACTGATCCTAAAACAGAGCTGGGTTA
FD972171       --> ATTCATCGACCCCAAACCCAACTCACTGATCCTAAAACAGAGCTGGGTTA
FY437462       --> ATTCTTCGACCCCAAACCCAACTCACTGATCCTAAAACAGAGCTGGGTTA
EW734095       --> ATTCTTCGACCCCAAACCCAACTCACTGATCCTAAAACAGAGCTGGGTTA
FD540168       --> ..................................................
EY898782       --> ..................................................
EX906030       --> ..................................................

               201    -    251
UN14132        --> AAAATCCCTCGAAAAGAAGATTCTCAGCCGTGAAGGTCAAGGCCAGTGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY428390       <-- AAAATCCCTCGAAAAGAAGATTCTCAGCCGTGAAGGTCAAGGCCAGTGCG
FY428176       <-- ...............................GAAGGTCAAGGCCAGTGCG
FY432668       <-- .............................................GTGCG
FY431135       <-- ..................................................
FD538276       <-- ..................................................
FD968067       <-- ..................................................
EY914431       --> AAAATCCCTCGAAAAGAAGATTCTCAGCCGTGAAGGTCAAGGCCAGTGCG
EY906457       --> AAAATCCCTCGAAAAGAAGATTCTCAGCCGTGAAGGTCAAGGCCAGTGCG
FD971847       --> AAAA..............................................
EY948743       --> AAAATCCCTCGAAAAGAAGATTCTCAGCCGTGAAGGTCAAGGCCAGTGCG
FD542285       --> AAACTCCCTCGAAAAGAAGATTCTCAGCCGTGAAGGTCAAGGCCAGTGCG
EX756618       --> AAAATCCCTCGAAAAGAAGATTCTCAGCCGTGAAGGTCAAGGCCAGTGCG
FD548524       --> AAAATCCCTCGAAAAGAAGATTCTCAGCCGTGAAGGTCAAGGCCAGTGCG
EX756836       --> AAACTCCCTCGAAAAGAAGATTCTCAGCCGTGAAGGTCAAGGCCAGTGCG
FD542139       --> AAAATCCCTCGAAAAGAAGATTCTCAGCCGTGAAGGTCAAGGCCAGTGCG
FD549298       --> AAAATCCCTCGAAAAGAAGATTCTCAGCCGTGAAGGTCAAGGCCAGTGCG
FY435805       --> AAAATCCCTCGAAAAGAAGATTCTCAGCCGTGAAGGTCAAGGCCAGTGCG
EY908294       --> AAACTCCCTCGAAAAGAAGATTCTCAGCCGTGAAGGTCAAGGCCAGTGCG
FD972100       --> AAAATCCCTCGAAAAGAAGATTCTCAGCCGTGAAGGTCAAGGCCAGTGCG
FD972171       --> AAAATCCCTCGAAAAGAAGATTCTCAGCCGTGAAGGTCAAGGCCAGTGCG
FY437462       --> AAAATCCCTCGAAAAGAAGATTCTCAGCCGTGAAGGTCAAGGCCAGTGCG
EW734095       --> AAACTCCCTCGAAAAGAAGATTCTCAGCCGTGAAGGTCAAGGCCAGTGCG
FD540168       --> ................AAGATTCTCAGCCGTGAAGGTCAAGGCCAGTGCG
EY898782       --> ..................................................
EX906030       --> ..................................................

               251    -    301
UN14132        --> GCGTCACCAGGGAAGGTGGGTACACCGGCGGCCAAGGACGAGAAGGTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY428390       <-- GCGTCACCAGGGAAGGTGGGTACACCGGCGGCCAAGGACGAGAAAGTGCA  Raphanus sativus cv GSK3-1
FY428176       <-- GCGTCACCAGGGAAGGTGGGTACACCGGCGGCCAAGGACGAGAAAGTGCA  Raphanus sativus cv GSK3-1
FY432668       <-- GCGTCACCAGGGAAGGTGGGTACACCGGCGGCCAAGGACGAGAAAGTGCA  Raphanus sativus cv GSK3-1
FY431135       <-- ............AAGGTGGGTACACCGGCGGCCAAGGACGAGAAAGTGCA  Raphanus sativus cv GSK3-1
FD538276       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968067       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY914431       --> GCGTCACCAGGGAAGGTGGGTACACCGGCGGCCAAGGACGAGAAGGTGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906457       --> GCTTCACCAGGGAAGGTGGGTACACCGGCGGCGAAGGACGAGAAGGTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971847       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY948743       --> GCGTCACCAGGGAAGGTGGGTACACCGGCGGCCAAGGACGAGAAAGTGCA  Raphanus sativus cv Rat-Tail Radish #3870
FD542285       --> GCTTCACCAGGGAAGGTGGGTACACCGGCGGCCAAGGACGAGAAGGTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX756618       --> GCTTCACCAGGGAAGGTGGGTACACCGGCGGCGAAGGACGAGAAGGTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD548524       --> GCGTCACCAGGGAAGGTGGGTACACCGGCGGCCAAGGACGAGAAGGTGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX756836       --> GCTTCACCAGGGAAGGTGGGTACACCGGCGGCCAAGGACGAGAAGGTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542139       --> GCTTCACCAGGGAAGGTGGGTACACCGGCGGCGAAGGACGAGAAGGTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549298       --> GCGTCACCAGGGAAGGTGGGTACACCGGCGGCCAAGGACGAGAAGGTGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY435805       --> GCGTCACCAGGGAAGGTGGGTACACCGGCGGCCAAGGACGAGAAAGTGCA  Raphanus sativus cv GSK3-1
EY908294       --> GCTTCACCAGGGAAGGTGGGTACACCGGCGGCCAAGGACGAGAAGGTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972100       --> GCTTCACCAGGGAAGGTGGGTACACCGGCGGCGAAGGACGAGAAGGTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972171       --> GCTTCACCAGGGAAGGTGGGTACACCGGCGGCGAAGGACGAGAAGGTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY437462       --> GCGTCACCAGGGAAGGTGGGTACACCGGCGGCCAAGGACGAGAAAGTGCA  Raphanus sativus cv GSK3-1
EW734095       --> GCGTCACCAGGGAAGGTGGGTACACCGGCGGCCAAGGACGAGAAGGTGCA  Raphanus sativus cv Rat-Tail Radish #3870
FD540168       --> GCTTCACCAGGGAAGGTGGGTACACCGGCGGCGAAGGACGAGAAGGTGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY898782       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX906030       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               301    -    351
UN14132        --> AAAGATTCACAGCGGAGAGGAGTTTGACGAAGCGCTTAAGAAGGCCAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY428390       <-- AAAGATTCACAGCGGAGAGGAGTTTGACGAAGCGCTTAAGAAGGCCAAGA
FY428176       <-- AAAGATTCACAGCGGAGAGGAGTTTGACGAAGCGCTTAAGAAGGCCAAGA
FY432668       <-- AAAGATTCACAGCGGAGAGGAGTTTGACGAAGCGCTTAAGAAGGCCAAGA
FY431135       <-- AAAGATTCACAGCGGAGAGGAGTTTGACGAAGCGCTTAAGAAGGCCAAGA
FD538276       <-- ..................................................
FD968067       <-- ..................................................
EY914431       --> AAAGATTCACAGCGGAGAGGAGTTTGACGAAGCGCTTAAGAAGGCCAAGA
EY906457       --> AAAGATTCACAGCAGAGAGGAGTTTGACGAAGCGCTTAAGAAGGCCAAGA
FD971847       --> ..................................................
EY948743       --> AAAGATTCACAGCGGAGAGGAGTTTGACGAAGCGCTTAAGAAGGCCAAGA
FD542285       --> AAAGATTCACAGCGGAGAGGAGTTTGACGAAGCGCTTAAGAAGGCCAAGA
EX756618       --> AAAGATTCACAGCGGAGAGGAGTTTGACGAAGCACTTAAGAAGGCCAAGA
FD548524       --> AAAGATTCACAGCGGAGAGGAGTTTGACGAAGCGCTTAAGAAGGCCAAGA
EX756836       --> AAAGATTCACAGCGGAGAGGAGTTTGACGAAGCGCTTAAGAAGGCCAAGA
FD542139       --> AAAGATTCACAGCGGAGAGGAGTTTGACGAAGCGCTTAAGAAGGCCAAGA
FD549298       --> AAAGATTCACAGCGGAGAGGAGTTTGACGAAGCGCTTAAGAAGGCCAAGA
FY435805       --> AAAGATTCACAGCGGAGAGGAGTTTGACGAAGCGCTTAAGAAGGCCAAGA
EY908294       --> AAAGATTCACAGCGGAGAGGAGTTTGACGAAGCGCTTAAGAAGGCCAAGA
FD972100       --> AAAGATTCACAGCGGAGAGGAGTTTGACGAAGCGCTTAAGCAGGCCAAGA
FD972171       --> AAAGATTCACAGCGGAGAGGAGTTTGACGAAGCGCTTAAGAAGGCCAAGA
FY437462       --> AAAGATTCACAGCGGAGAGGAGTTTGACGAAGCGCTTAAGAAGGCCAAGA
EW734095       --> AAAGATTCACAGCGGAGAGGAGTTTGACGAAGCGCTTAAGAAGGCCAAGA
FD540168       --> AAAGATTCACAGCGGAGAGGAGTTTGACGAAGCGCTTAAGAAGGCCAAGA
EY898782       --> ..................................................
EX906030       --> ..................................................

               351    -    401
UN14132        --> ACAAGCTTGTGGTTGTTGAGTTTGCCACGAGTAAGAGTGATCAGAGTAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY428390       <-- ACAAGCTTGTGGTTGTGGAGTTTGCCACGAGTAAGAGTGATCAGAGTAGT  Raphanus sativus cv GSK3-1
FY428176       <-- ACAAGCTTGTGGTTGTGGAGTTTGCCACGAGTAAGAGTGATCAGAGTAGT  Raphanus sativus cv GSK3-1
FY432668       <-- ACAAGCTTGTGGTTGTGGAGTTTGCCACGAGTAAGAGTGATCAGAGTAGT  Raphanus sativus cv GSK3-1
FY431135       <-- ACAAGCTTGTGGTTGTGGAGTTTGCCACGAGTAAGAGTGATCAGAGTAGT  Raphanus sativus cv GSK3-1
FD538276       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968067       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY914431       --> ACAAGCTTGTGGTTGTTGAGTTTGCCACGAGTAAGAGTGATCAGAGTAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906457       --> ACAAGCTTGTGGTTGTTGAGTTTGCCACGAGTAAGAGTGATCAGAGTAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971847       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY948743       --> ACAAGCTTGTGGTTGTGGAGTTTGCCACGAGTAAGAGTGATCAGAGTAGT  Raphanus sativus cv Rat-Tail Radish #3870
FD542285       --> ACAAGCTTGTGGTTGTTGAGTTTGCCACGAGTAAGAGTGATCAGAGCAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX756618       --> ACAAGCTTGTGGTTGTTGAGTTTGTCACGAGTAAGAGTGATCAGAGTAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD548524       --> ACAAGCTTGTGGTTGTTGAGTTTGCCACGAGTAAGAGTGATCAGAGTAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX756836       --> ACAAGCTTGTGGTTGTTGAGTTTGCCACGAGTAAGAGTGATCAGAGTAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542139       --> ACAAGCTTGTGGTTGTTGAGTTTGCCACGAGTAAGAGTGATCAGAGTAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549298       --> ACAAGCTTGTGGTTGTTGAGTTTGCCACGAGTAAGAGTGATCAGAGTAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY435805       --> ACAAGCTTGTGGTTGTGGAGTTTGCCACGAGTAAGAGTGATCAGAGTAGT  Raphanus sativus cv GSK3-1
EY908294       --> ACAAGCTTGTGGTTGTTGAGTTTGCCACGAGTAAGAGTGATCAGAGTAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972100       --> ACAAGCTTGTGGTTGTTGAGTTTGCCACGAGTAAGAGTGATCAGAGTAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972171       --> ACAAGCTTGTGGTTGTTGAGTTTGCCACGAGTAAGAGTGATCAGAGTAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY437462       --> ACAAGCTTGTGGTTGTGGAGTTTGCCACGAGTAAGAGTGATCAGAGTAGT  Raphanus sativus cv GSK3-1
EW734095       --> ACAAGCTTGTGGTTGTTGAGTTTGCCACGAGTAAGAGTGATCAGAGTAGT  Raphanus sativus cv Rat-Tail Radish #3870
FD540168       --> ACAAGCTTGTGGTTGTTGAGTTTGCCACGAGTAAGAGTGATCAGAGTAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY898782       --> .................................................g  Raphanus raphanistrum subsp. maritimus
EX906030       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               401    -    451
UN14132        --> AAGATATATCCTTTTATGGTGGAGCTGAGCAGGACATGTAACGACGTCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY428390       <-- AAGATATATCCGTTTATGGTGGAGCTGAGCAGGACATGTAACGACGTCGA  Raphanus sativus cv GSK3-1
FY428176       <-- AAGATATATCCGTTTATGGTGGAGCTGAGCAGGACATGTAACGACGTCGA  Raphanus sativus cv GSK3-1
FY432668       <-- AAGATATATCCGTTTATGGTGGAGCTGAGCAGGACATGTAACGACGTCGA  Raphanus sativus cv GSK3-1
FY431135       <-- AAGATATATCCGTTTATGGTGGAGCTGAGCAGGACATGTAACGACGTCGA  Raphanus sativus cv GSK3-1
FD538276       <-- ...............ATGGTTGAGCTGAGCAGGACATGTAACGACGTCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968067       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY914431       --> AAGATATATCCTTTTATGGTGGAGCTGAGCAGGACATGTAACGACGTCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906457       --> AAGATATATCCTTTTATGGTTGAGCTGAGCGGGACATGTAACGACGTCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971847       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY948743       --> AAGATATATCCGTTTATGGTGGAGCTGAGCAGGACATGTAACGACGTCGA  Raphanus sativus cv Rat-Tail Radish #3870
FD542285       --> ATGATATATCCTTTTATGGTGGAGCTGAGCAGGACATGTAACGACGTCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX756618       --> AAGATATATCCTTTTATGGTTGAGCTGAGCAGGACATGTAACGACGTCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD548524       --> AAGATATATCCTTTTATGGTGGAGCTGAGCAGGACATGTAACGACGTCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX756836       --> AAGATATATCCTTTTATGGTGGAGCTGAGCAGGACATGTAACGACGTCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542139       --> AAGATATATCCTTTTATGGTTGAGCTGAGCAGGACATGTAACGACGTCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549298       --> AAGATATATCCTTTTATGGTGGAGCTGAGCAGGACATGTAACGACGTCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY435805       --> AAGATATATCCGTTTATGGTGGAGCTGAGCAGGACATGTAACGACGTCGA  Raphanus sativus cv GSK3-1
EY908294       --> AAGATATATCCTTTTATGGTGGAGCTGAGCAGGACATGTAACGACGTCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972100       --> AAGATATATCCTTTTATGGTTGAGCTGAGCAGGACATGTAACGACGTCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972171       --> AAGATATATCCTTTTATGGTTGAGCTGAGCAGGACATGTAACGACGTCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY437462       --> AAGATATATCCGTTTATGGTGGAGCTGAGCAGGACATGTAACGACGTCGA  Raphanus sativus cv GSK3-1
EW734095       --> AAGATATATCCTTTTATGGTGGAGCTGAGCAGGACATGTAACGACGTCGA  Raphanus sativus cv Rat-Tail Radish #3870
FD540168       --> AAGATATATCCTTTTATGGTTGAGCTGAGCAGGACATGTAACGACGTCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY898782       --> AAGATATATCCTTTTATGGTGGAGCTGAGCAGGACATGTAACGACGTCGA  Raphanus raphanistrum subsp. maritimus
EX906030       --> .AGATATATCCGTTTATGGTGGAGCTGAGCAGGACATGTAACGACGTCGA  Raphanus sativus cv Rat-Tail Radish #3870

               451    -    501
UN14132        --> CTTCTTGCTCGTCATGGGTGATGAGTCCGAAAAGACTAGAGAGCTTTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY428390       <-- CTTCTTGCTCGTCATGGGTGATGAGTCCGAAAAGACTAGAGAGCTTTGTC
FY428176       <-- CTTCTTGCTCGTCATGGGTGATGAGTCCGAAAAGACTAGAGAGCTTTGTC
FY432668       <-- CTTCTTGCTCGTCATGGGTGATGAGTCCGAAAAGACTAGAGAGCTTTGTC
FY431135       <-- CTTCTTGCTCGTCATGGGTGATGAGTCCGAAAAGACTAGAGAGCTTTGTC
FD538276       <-- CTTCTTGCTCGTCATGGGTGATGAGTCCGAAAAGACTAGAGAGCTTTGTC
FD968067       <-- ..................................................
EY914431       --> CTTCTTGCTCGTCATGGGTGATGAGTCCGAAAAGACTAGAGAGCTTTGTC
EY906457       --> CTTCTTGCTCGTCATGGGTGATGAGTCCGAAAAGACTAGAGAGCTTTGTC
FD971847       --> ..................................................
EY948743       --> CTTCTTGCTCGTCATGGGTGATGAGTCCGAAAAGACTAGAGAGCTTTGTC
FD542285       --> CTTCTTGCTCGTCATGGGTGATGAGTCCGAAAAGACTAGAGAGCTTTGTC
EX756618       --> CTTCTTGCTCGTCATGGGTGATGAGTCCGAAAAGACTAGAGAGCTTTGTC
FD548524       --> CTTCTTGCTCGTCATGGGTGATGAGTCCGAAAAGACTAGAGAGCTTTGTC
EX756836       --> CTTCTTGCTCGTCATGGGTGATGAGTCCGAAAAGACTAGAGAGCTTTGTC
FD542139       --> CTTCTTGCTCGTCATGGGTGATGAGTCCGAAAAGACTAGAGAGCTTTGTC
FD549298       --> CTTCTTGCTCGTCATGGGTGATGAGTCCGAAAAGACTAGAGAGCTTTGTC
FY435805       --> CTTCTTGCTCGTCATGGGTGATGAGTCCGAAAAGACTAGAGAGCTTTGTC
EY908294       --> CTTCTTGCTCGTCATGGGTGATGAGTCCGAAAAGACTAGAGAGCTTTGTC
FD972100       --> CTTCTTGCTCGTCATGGGTGATGAGTCCGAAAAGACTAGAGAGCTTTGTC
FD972171       --> CTTCTTGCTCGTCATGGGTGATGAGTCCGAAAAGACTAGAGAGCTTTGTC
FY437462       --> CTTCTTGCTCGTCATGGGTGATGAGTCCGAAAAGACTAGAGAGCTTTGTC
EW734095       --> CTTCTTGCTCGTCATGGGTGATGAGTCCGAAAAGACTAGAGAGCTTTGTC
FD540168       --> CTTCTTGCTCGTCATGGGTGATGAGTCCGAAAAGACTAGAGAGCTTTGTC
EY898782       --> CTTCTTGCTCGTCATGGGTGATGAGTCCGAAAAGACTAGAGAGCTTTGTC
EX906030       --> CTTCTTGCTCGTCATGGGTGATGAGTCCGAAAAGACTAGAGAGCTTTGTC

               501    -    551
UN14132        --> GGAGAGAGAAGATCGAGAAAGTTCCTCACTTTAGCTTTTATAAGAGCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY428390       <-- GGAGAGAGAAGATCGAGAAAGTTCCTCACTTTAGCTTTTATAAGAGCATG
FY428176       <-- GGAGAGAGAAGATCGAGAAAGTTCCTCACTTTAGCTTTTATAAGAGCATG
FY432668       <-- GGAGAGAGAAGATCGAGAAAGTTCCTCACTTTAGCTTTTATAAGAGCATG
FY431135       <-- GGAGAGAGAAGATCGAGAAAGTTCCTCACTTTAGCTTTTATAAGAGCATG
FD538276       <-- GGAGGGAGAAGATCGAGAAAGTTCCTCACTTTAGCTTCTATAAGAGCATG
FD968067       <-- .........AGATCGAGAAAGTTCCTCACTTTAGCTTCTATAAGAGCATG
EY914431       --> GGAGAGAGAAGATCGAGAAAGTTCCTCACTTTAGCTTTTATAAGAGCATG
EY906457       --> GGAGGGAGAAGATCGAGAAAGTTCCTCACTTTAGCTTCTATAAGAGCATG
FD971847       --> ..................................................
EY948743       --> GGAGAGAGAAGATCGAGAAAGTTCCTCACTTTAGCTTTTATAAGAGCATG
FD542285       --> GGAGAGAGAAGATCGAGAAAGTTCCTCACTTTAGCTTTTATAAGAGCATG
EX756618       --> GGAGGGAGAAGATCGAGAAAGTTCCTCACTTTAGCTTCTATAAGAGCATG
FD548524       --> GGAGAGAGAAGATCGAGAAAGTTCCTCACTTTAGCTTTTATAAGAGCATG
EX756836       --> GGAGAGAGAAGATCGAGAAAGTTCCTCACTTTAGCTTTTATAAGAGCATG
FD542139       --> GGAGGGAGAAGATCGAGAAAGTTCCTCACTTTAGCTTCTATAAGAGCATG
FD549298       --> GGAGAGAGAAGATCGAGAAAGTTCCTCACTTTAGCTTTTATAAGAGCATG
FY435805       --> GGAGAGAGAAGATCGAGAAAGTTCCTCACTTTAGCTTTTATAAGAGCATG
EY908294       --> GGAGAGAGAAGATCGAGAAAGTTCCTCACTTTAGCTTTTATAAGAGCATG
FD972100       --> GGAGGGAGAAGATCGAGAAAGTTCCTCACTTTAGCTTCTATAAGAGCATG
FD972171       --> GGAGGGAGAAGATCGAGAAAGTTCCTCACTTTAGCTTCTATAAGAGCATG
FY437462       --> GGAGAGAGAAGATCGAGAAAGTTCCTCACTTTAGCTTTTATAAGAGCATG
EW734095       --> GGAGAGAGAAGATCGAGAAAGTTCCTCACTTTAGCTTTTATAAGAGCATG
FD540168       --> GGAGGGAGAAGATCGAGAAAGTTCCTCACTTTAGCTTCTATAAGAGCATG
EY898782       --> GGAGAGAGAAGATCGAGAAAGTTCCTCACTTTAGCTTCTATAAGAGCATG
EX906030       --> GGAGAGAGAAGATCGAGAAAGTTCCTCACTTTAGCTTTTATAAGAGCATG

               551    -    601
UN14132        --> GAGAAAATACACGAGGAAGAAGGTATTGGACCGGACCAGCTAATGGGGG-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY428390       <-- GAGAAAATACACGAGGAAGAAGGTATTGGACCGGACCAGCTAATGGGTG-  Raphanus sativus cv GSK3-1
FY428176       <-- GAGAAAATACACGAGGAAGAAGGTATTGGACCGGACCAGCTAATGGGTG-  Raphanus sativus cv GSK3-1
FY432668       <-- GAGAAAATACACGAGGAAGAAGGTATTGGACCGGACCAGCTAATGGGTG-  Raphanus sativus cv GSK3-1
FY431135       <-- GAGAAAATACACGAGGAAGAAGGTATTGGACCGGACCAGCTAATGGGTG-  Raphanus sativus cv GSK3-1
FD538276       <-- GAGAAAATACACGAGGAAGAAGGTATTGGACCGGACCAGCTAATGGGGG-  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968067       <-- GAGAAAATACACGAGGAAGAAGGTATTGGACCGGACCAGCTAATGGGGG-  Raphanus raphanistrum subsp. raphanistrum (MS)
EY914431       --> GAGAAAATACACGAGGAAGAAGGTATTGGACCGGACCAGCTAATGGGGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906457       --> GAGAAAATACACGAGGAAGAAGGTATTGGACCGGACCAGCTAATGGGGG-  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971847       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY948743       --> GAGAAAATACACGAGGAAGAAGGTATTGGACCGGACCAGCTAATGGGTG-  Raphanus sativus cv Rat-Tail Radish #3870
FD542285       --> GAGAAAATACACGAGGAAGAAG-TATCGGACCGGACCAGTTAATGGGGG-  Raphanus raphanistrum subsp. raphanistrum (MS)
EX756618       --> GAGAAAATACACGAGGAAGAAGGTATTGGACCGGACCAGCTAATGGGGGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD548524       --> GAGAAAATACACGAGGAAGAAGGTATCGGACCGGACCAGCTAATGGGGG-  Raphanus raphanistrum subsp. raphanistrum (NY)
EX756836       --> GAGAAAATACACGAGGAAGAAGGTATCGGACCGGACCAGTTAATGGGGGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542139       --> GAGAAAATACACGAGGAAGAAGGTATTGGACCGGACCAGCTAATGGGGG-  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549298       --> GAGAAAATACACGAGGAAGAAGGTATCGGACCGGACCAGCTAATGGGGG-  Raphanus raphanistrum subsp. raphanistrum (NY)
FY435805       --> GAGAAAATACACGAGGAAGAAGGTATTGGACCGGACCAGCTAATGGGTG-  Raphanus sativus cv GSK3-1
EY908294       --> GAGAAAATACACGAGGAAGAAG-TATCGGACCGGACCAGTTAATGGGGG-  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972100       --> GAGAAAATACACGAGGAAGAAGGTATTGGACCGGACCAGCTAATGGGGG-  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972171       --> GAGAAAATACACG.....................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY437462       --> GAGAAAATACACGAGGAAGAAGGTATTGGACCGGACCAGCTAATGGGTG-  Raphanus sativus cv GSK3-1
EW734095       --> GAGAAAATACACGAGGAAGAAGGTATCGGACCGGACCAGCTAATGGGGG-  Raphanus sativus cv Rat-Tail Radish #3870
FD540168       --> GAGAAAATACACGAGGAAGAAGGTATTGGACCGGACCAGCTAATGGGGG-  Raphanus raphanistrum subsp. raphanistrum (MS)
EY898782       --> GAGAAAATACACGAGGAAGAAGGTATTGGACCGGACCAGCTAATGGGGG-  Raphanus raphanistrum subsp. maritimus
EX906030       --> GAGAAAATACACGAGGAAGAAGGTATTGGACCGGACCAGCTAATGGGTG-  Raphanus sativus cv Rat-Tail Radish #3870

               601    -    651
UN14132        --> ACGTGCTATATTACGGGGACAGCCACTCGGCGGTTGTGCAGCTGCATGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY428390       <-- ACGTGCTATATTACGGGGACAGCCACTCGGCGGTTGTGCAGCTGCATGGA  Raphanus sativus cv GSK3-1
FY428176       <-- ACGTGCTATATTACGGGGACAGCCACTCGGCGGTTGTGCAGCTGCATGGA  Raphanus sativus cv GSK3-1
FY432668       <-- ACGTGCTATATTACGGGGACAGCCACTCGGCGGTTGTGCAGCTGCATGGA  Raphanus sativus cv GSK3-1
FY431135       <-- ACGTGCTATATTACGGGGACAGCCACTCGGCGGTTGTGCAGCTGCATGGA  Raphanus sativus cv GSK3-1
FD538276       <-- ACGTGCTATATTACGGGGACAGCCACTCGGCGGTTGTGCAGCTGCATGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968067       <-- ACGTGCTATATTACGGGGATAGCCACTCGGCGGTTGTGCAGCTGCATGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY914431       --> ACGTGCTATATTACGGGGATAGCCACTCGGCGGTTTTGCAGCTGCATGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906457       --> ACGTGCTATATTACGGGGACAGCCACTCGGCGGTTGTGCAGCTGCATGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971847       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY948743       --> ACGTGCTATATTACGGGGACAGCCACTCGGCGGTTGTGCAGCTGCATGGA  Raphanus sativus cv Rat-Tail Radish #3870
FD542285       --> ACGTGCTATATTATGGAGACAGCCACTCGGCGGTTGTGCAGCTGCATGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX756618       --> ACGTGCTATATTACGGGGACAGCCACTCGGCGGTTGTGCAGCTGCATGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD548524       --> ACGTGCTATATTACGGGGATAGCCACTCGGCGGTTGTGCAGCTGCATGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX756836       --> ACGTGCTATATTATGGAGACAGCCACTCGGCGGTTGTGCAGCTGCATGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542139       --> ACGTGCTATATTACGGGGACAGCCACTCGGCGGTTGTGCAGCTGCATGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549298       --> ACGTGCTATATTACGGGGATAGCCACTCGGCAGTTGTGCAGCTGCATGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY435805       --> ACGTGCTATATTACGGGGACAGCCACTCGGCGGTTGTGCAGCTGCATGGA  Raphanus sativus cv GSK3-1
EY908294       --> ACGTGCTATATTATGGAGACAGCCACTCGGCGGTTGTGCAGCTGCATGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972100       --> ACGTGCTATATTACGGGGATAGCCACTCGGCGGTTGTGCAGCTGCATGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972171       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY437462       --> ACGTGCTATATTACGGGGACAGCCACTCGGCGGTTGTGCAGCTGCATGGA  Raphanus sativus cv GSK3-1
EW734095       --> ACGTGCTATATTACGGGGATAGCCACTCGGCGGTTGTGCAGCTGCATGGA  Raphanus sativus cv Rat-Tail Radish #3870
FD540168       --> ACGTGCTATATTACGGGGACAGCCACTCGGCGGTTGTGCAGCTGCAGGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY898782       --> GCGTGCTATATTACGGGGACAGCCACTCGGCGGTTGTGCAGCTGCATGGA  Raphanus raphanistrum subsp. maritimus
EX906030       --> ACGTGCTATATTACGGGGACAGCCACTCGGCGGTTGTGCAGCTGCATGGA  Raphanus sativus cv Rat-Tail Radish #3870

               651    -    701
UN14132        --> CGAGCTGACGTGGAGAAGCTGATTGACGAGAACCGTACTGGAGGCAAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY428390       <-- CGAGCTGACGTGGAGAAGCTGATTGACGAGAACCGTACTGGAGGCAAGCT
FY428176       <-- CGAGCTGACGTGGAGAAGCTGATTGACGAGAACCGTACTGGAGGCAAGCT
FY432668       <-- CGAGCTGACGTGGAGAAGCTGATTGACGAGAACCGTACTGGAGGCAAGCT
FY431135       <-- CGAGCTGACGTGGAGAAGCTGATTGACGAGAACCGTACTGGAGGCAAGCT
FD538276       <-- CGAGCTGACGTGGAGAAGTTGATTGACGAGAACCGTACTGGAGGCAAGCT
FD968067       <-- CGAGCTGACGTGGAGAAGTTGATTGACGAGAACCGTACTGGAGGCAAGCT
EY914431       --> CGAGCCGACGTGGAGAAGCTGATTGACGAGAACCGTACTGGAG-CAAGCT
EY906457       --> CGAGCTGACGTGGAGAAGTTGATTGACGAGAACCGTACTGGAGGCAAGCT
FD971847       --> ..................................................
EY948743       --> CGAGCTGACGTGGAGAAGCTGATTGACGAGAACCGTACTGGAGGCAAGCT
FD542285       --> CGAGCTGACGTGGAGAAGCTGATTGACGAGAACCGTACTGGAG-CAAGCT
EX756618       --> CGAGCTGACGTGGAGAAGTTGATTGACGAGAACCGTACTGGAG-CAAGCT
FD548524       --> CGAGCCGACGTGGAGAAGCTGATTGACGAGAACCGTACTGGAG-CAAGCT
EX756836       --> CGAGCTGACGTGGAGAAGCTGATTGACGAGAACCGTACTGGAG-CAAGCT
FD542139       --> CGAGCTGACGTGGAGAAGTTGATTGACGAGAACCGTACTGGAGGCAAGCT
FD549298       --> CGAGCCGACGTGGAGAAGCTGATTGACGAGAACCGTACTGGAGGCAAGCT
FY435805       --> CGAGCTGACGTGGAGAAGCTGATTGACGAGAACCGTACTGGAGGCAAGCT
EY908294       --> CGAGCTGACGTGGAGAAGCTGATTGACGAGAACCGTACTGGAG-CAAGCT
FD972100       --> CGAGCTGACGTGGAGAAGTTGATTGACGAGAACCGTACTGGAGGCAAGCT
FD972171       --> ..................................................
FY437462       --> CGAGCTGACGTGGAGAAGCTGATTGACGAGAACCGTACTGGAGGCAAGCT
EW734095       --> CGAGTCGACGTGGAGAAGCTGATTGACGAGAACCGTACTGGAGGCAAGCT
FD540168       --> CGAGCTGACGTGGAGAAGTTGATTGACGAGAACCGTACTGGAG-CAAGCT
EY898782       --> CGAGCTGACGTGGAGAAGCTGATTGACGAGAACCGTACTGGAGGCAAGCT
EX906030       --> CGAGCTGACGTGGAGAAGCTGATTGACGAGAACCGTACTGGAGGCAAGCT

               701    -    751
UN14132        --> GATTGTGCTGGATGTCGGTCTGAAACACTGTGGACCATGCGTGAAGGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY428390       <-- GATTGTGCTGGATGTCGGTCTGAAACACTGTGGACCATGCGTGAAGGTTT
FY428176       <-- GATTGTGCTGGATGTCGGTCTGAAACACTGTGGACCATGCGTGAAGGTTT
FY432668       <-- GATTGTGCTGGATGTCGGTCTGAAACACTGTGGACCATGCGTGAAGGTTT
FY431135       <-- GATTGTGCTGGATGTCGGTCTGAAACACTGTGGACCATGCGTGAAGGTTT
FD538276       <-- GATTGTGCTGGATGTCGGTCTGAAACACTGTGGACCATGCGTGAAGGTTT
FD968067       <-- GATTGTGCTGGATGTCGGTTTGAAACACTGTGGACCATGCGTGAAGGTTT
EY914431       --> GATTGTGCTGGATGTTGGTCTGAAACACTGTGGAC-ATGCGTGAAG-TTT
EY906457       --> GATTGTGCTGGATGTCGGTCTGAAACACTGTGGACCATGCGT........
FD971847       --> ..................................................
EY948743       --> GATTGTGCTGGATGTCGGTCTGAAACACTGTGGAC-ATGCGTGAAG-TTT
FD542285       --> GATTGTGCTGGATGTCGGTCTGAA-CACTGTGGAC-ATGCGTGAAG-TTT
EX756618       --> GAT-GTGCTGGATGTCG-TCTGAAACACTGTGGAC-ATGCGTGAAG-TTT
FD548524       --> GATTGTGCTGGATGTTGTTCTGAAACACTGTGTACCATGCGTGAAG-TTT
EX756836       --> GATTGTGCTGGATGTCG-TCTGAAACACTGTGGAC-ATGCGTGAAG-TTT
FD542139       --> GATTGTGCTGGATGTCGGTCTGAAACACTGTGGAC-ATGCGTGAAGGTT-
FD549298       --> GATTGTGCTGGATGTTGGTCTGAAACACTGTGGAC-ATGCGTGAAGGTT-
FY435805       --> GATTGTGCTGGATGTCGGTCTGAAACACTGTGGACCATGCGTGAAGGTTT
EY908294       --> GATTGTGCTGGATGTCG-TCTGAAACACTGTGGACCATGCGTGAAG-TTT
FD972100       --> GATTGTGCTGGATGTCGGTCTGAAACACTGTGGAC-ATGCGTGAAG-TTT
FD972171       --> ..................................................
FY437462       --> GATTGTGCTGGATGTCGGTCTGAAACACTGTGGACCATGCGTGAAGGTTT
EW734095       --> GATTGTGCTGGATGTTGGTCTGAAACACTGTGGACCATGCGTGAAG-TTT
FD540168       --> GATTGTGCTGGATGTCGGTCTGAAACACTGTGGAC-ATGCGTGAAG-TTT
EY898782       --> GATTGTGCTGGATGTCGGTCTGAAACACTGTGGACCATGCGTGAAGGTTT
EX906030       --> GATTGTGCTGGATGTCGGTCTGAAACACTGTGGACCATGCGTGAAGGTTT

               751    -    801
UN14132        --> ATCCGACGGTGCTGAAACTGTCCCGG-TCGATGTCCGAGTCTGTCGTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY428390       <-- ATCCGACGGTGCTGAAACTGTCCCGG-TCGATGTCCGAGTCGGTCGTGTT  Raphanus sativus cv GSK3-1
FY428176       <-- ATCCGACGGTGCTGAAACTGTCCCGG-TCGATGTCCGAGTCGGTCGTGTT  Raphanus sativus cv GSK3-1
FY432668       <-- ATCCGACGGTGCTGAAACTGTCCCGG-TCGATGTCCGAGTCGGTCGTGTT  Raphanus sativus cv GSK3-1
FY431135       <-- ATCCGACGGTGCTGAAACTGTCCCGG-TCGATGTCCGAGTCGGTCGTGTT  Raphanus sativus cv GSK3-1
FD538276       <-- ATCCGACAGTGCTGAAACTGTCCCGG-TCGATGTCCGAGTCTGTCGTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968067       <-- ATCCGACAGTGCTGAAACTGTCCCGG-TCGATGTCCGAGTCTGTCGTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY914431       --> ATCCAACG-TGCTGAAACTGTCCCGG-TCGATGTCCGAGTCTGTCGTGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906457       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971847       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY948743       --> ATCCGACG-TGCTGAAACTGTCCCGG-TCGATGTCCGAGTC-GTCGTGTc  Raphanus sativus cv Rat-Tail Radish #3870
FD542285       --> ATCCGACG-TGCTGAAACTGTCCCGG-TCGATGTCCGAGTCTGTCGTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX756618       --> ATCCGACAGTGCTGAAACT...............................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD548524       --> ATCCAACGGTGCTGAAACTGTCCCGGGTCGATGTCCGAGTCTGTC.....  Raphanus raphanistrum subsp. raphanistrum (NY)
EX756836       --> ATCCGACG-TGCTGAAACTG..............................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD542139       --> ATCCGACAGTGCTGAAACTGTCCCGG-TCGATGTCCGAGTCTGTCGTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549298       --> ATCCAACGGTGCTGAAACTGTCCCGG-TCGATGTCCGAGTCTGTCGTGT-  Raphanus raphanistrum subsp. raphanistrum (NY)
FY435805       --> ATCCGACGGTGCTGAAACTGTCCCGG-TCG....................  Raphanus sativus cv GSK3-1
EY908294       --> ATCCGACG-TGCTGAA-CTGTCC...........................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972100       --> ATCCGACAGTGCTGAAACTGTCCCGG-TCGATGTCCGAGTCTGTCGTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD972171       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY437462       --> ATCCGACGGTGCTGAAACTGTCCCGG-TCGATGTCCGAGTCGGTCGTGTT  Raphanus sativus cv GSK3-1
EW734095       --> ATCC..............................................  Raphanus sativus cv Rat-Tail Radish #3870
FD540168       --> ATCCGACAGTGCTGAAACTGT.............................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY898782       --> ATCCGACGGTGCTGAAACTGTCCCGG-TCGATGTCCGAGTCTGTCGTGTT  Raphanus raphanistrum subsp. maritimus
EX906030       --> ATCCGACGGTGCTGAAACTGTCCCGG-TCGATGTCCGAGTCGGTCGTGTT  Raphanus sativus cv Rat-Tail Radish #3870

               801    -    851
UN14132        --> CGCTAGAATGAATGGGGACGAGAACGATAGCTGTATGGAGTTTCTAAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY428390       <-- CGCTAGAATGAATGGGGACGAGAACGATAGCTGTATGGAGTTTCTAAAGG
FY428176       <-- CGCTAGAATGAATGGGGACGAGAACGATAGCTGTATGGAGTTTCTAAAGG
FY432668       <-- CGCTAGAATGAATGGGGACGAGAACGATAGCTGTATGGAGTTTCTAAAGG
FY431135       <-- CGCTAGAATGAATGGGGACGAGAACGATAGCTGTATGGAGTTTCTAAAGG
FD538276       <-- CGCTAGAATGAACGGGGACGAGAACGATAGCTGTATGGAGTTTCTAAAGG
FD968067       <-- CGCTAGAATGAAGGGGGACGAGAACGATAGCTGTATGGAGTTTCTAAAGG
EY914431       --> CGCTAGA-TG-ATGGGGAC...............................
EY906457       --> ..................................................
FD971847       --> ..................................................
EY948743       --> gct...............................................
FD542285       --> CGCTAGA-TG-ATGGGGACGAGA-CGATAGCTG.................
EX756618       --> ..................................................
FD548524       --> ..................................................
EX756836       --> ..................................................
FD542139       --> CGCTAGA-TGAACGGGGACGAGAACGATAGCTGTTTGGAGTTTCTAAAGG
FD549298       --> CGCTAGAATGA-TGGGGACGAGAACGATAGCTGTATGGAGTT........
FY435805       --> ..................................................
EY908294       --> ..................................................
FD972100       --> CGCTAGAATGAAgg....................................
FD972171       --> ..................................................
FY437462       --> CGCTAGAATGAATGGGGACGAGAACGATAGCTGTATGGAGTTTCTAAAGG
EW734095       --> ..................................................
FD540168       --> ..................................................
EY898782       --> CGCTAGAATGAATGGGGACGAGAACGATAGCTGTATGGAGTTTCTAAAGG
EX906030       --> CGCTAGAATGAATGGGGACGAGAACGATAGCTGTATGGAGTTTCTAAAGG

               851    -    901
UN14132        --> ACATGAATGTTATCGAAGTACCAACTTTCTTGTTCATCAGACAAGGCGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY428390       <-- ACATGAATGTTATCGAAGTACCAACTTTCTTGTTCATCAGACAAGGCGAT
FY428176       <-- ACATGAATGTTATCGAAGTACCAACTTTCTTGTTCATCAGACAAGGCGAT
FY432668       <-- ACATGAATGTTATCGAAGTACCAACTTTCTTGTTCATCAGACAAGGCGAT
FY431135       <-- ACATGAATGTTATCGAAGTACCAACTTTCTTGTTCATCAGACAAGGCGAT
FD538276       <-- ACATGAATGTTATCGAAGTACCAACTTTCTTGTTCATCAGACAAGGCGAT
FD968067       <-- ACATGAATGTTATCGAAGTACCAACTTTCTTGTTCATCAGACAAGGCGAT
EY914431       --> ..................................................
EY906457       --> ..................................................
FD971847       --> ..................................................
EY948743       --> ..................................................
FD542285       --> ..................................................
EX756618       --> ..................................................
FD548524       --> ..................................................
EX756836       --> ..................................................
FD542139       --> AC................................................
FD549298       --> ..................................................
FY435805       --> ..................................................
EY908294       --> ..................................................
FD972100       --> ..................................................
FD972171       --> ..................................................
FY437462       --> ACATGAATGTTATCGAAGTACCAACTTTCTTGTTCATCAGA.........
EW734095       --> ..................................................
FD540168       --> ..................................................
EY898782       --> ACATGAATGTTATCGAAGTACCAACTTTCTTGTTCATCAGACAAGGCGAT
EX906030       --> ACATGAATGTTATCGAAGTAC-AACTTTCTTGTTCATCAGACAAGGCGAT

               901    -    951
UN14132        --> ATTTGTGGGCGGTATGTTGGTTCCGGTAAAGGAGAACTCATTGGAGAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY428390       <-- ATTTGTGGGCGGTATGTTGGTTCCGGTAAAGGAGAACTCATTGGAGAGAT
FY428176       <-- ATTTGTGGGCGGTATGTTGGTTCCGGTAAAGGAGAACTCATTGGAGAGAT
FY432668       <-- ATTTGTGGGCGGTATGTTGGTTCCGGTAAAGGAGAACTCATTGGAGAGAT
FY431135       <-- ATTTGTGGGCGGTATGTTGGTTCCGGTAAAGGAGAACTCATTGGAGAGAT
FD538276       <-- ATTTGTGGGCGGTATGTTGGTTCCGGTAAAGGAGAACTCATTGGAGAGAT
FD968067       <-- ATTTGTGGGCGGTATGTTGGTTCCGGTAAAGGAGAACTCATTGGAGAGAT
EY914431       --> ..................................................
EY906457       --> ..................................................
FD971847       --> ..................................................
EY948743       --> ..................................................
FD542285       --> ..................................................
EX756618       --> ..................................................
FD548524       --> ..................................................
EX756836       --> ..................................................
FD542139       --> ..................................................
FD549298       --> ..................................................
FY435805       --> ..................................................
EY908294       --> ..................................................
FD972100       --> ..................................................
FD972171       --> ..................................................
FY437462       --> ..................................................
EW734095       --> ..................................................
FD540168       --> ..................................................
EY898782       --> ATTTGTGGGCGGTATGTTGGTTCGGGTAAAGGAGAACTCATTGGAGAGAT
EX906030       --> ATTTGTGGGCGGTATGTTGGTTCCGGTAAAGGAGAACTCATTGGAGAGAT

               951    -   1001
UN14132        --> TCTCCGGTACTCAGGCGTTCGTGTCACTTACTAATTTGTATCGAAACTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY428390       <-- TCTCCGGTACTCAGGCGTTCGTGTCACTTACTAATTTGTATCGAAACTCG
FY428176       <-- TCTCCGGTACTCAGGCGTTCGTGTCACTTACTAATTTGTATCGAAACTCG
FY432668       <-- TCTCCGGTACTCAGGCGTTCGTGTCACTTACTAATTTGTATCGAAACTCG
FY431135       <-- TCTCCGGTACTCAGGCGTTCGTGTCACTTACTAATTTGTATCGAAACTCG
FD538276       <-- TCTCCGGTACTCAGGCGTTCGTGTCACTTACTAATTTGTATCAAAACTCG
FD968067       <-- TTTCCGGTACTCAGGCGTTCGTGTCACTTACTAATTTGTATCAAAACTCG
EY914431       --> ..................................................
EY906457       --> ..................................................
FD971847       --> ..................................................
EY948743       --> ..................................................
FD542285       --> ..................................................
EX756618       --> ..................................................
FD548524       --> ..................................................
EX756836       --> ..................................................
FD542139       --> ..................................................
FD549298       --> ..................................................
FY435805       --> ..................................................
EY908294       --> ..................................................
FD972100       --> ..................................................
FD972171       --> ..................................................
FY437462       --> ..................................................
EW734095       --> ..................................................
FD540168       --> ..................................................
EY898782       --> TCTCCGGTAC........................................
EX906030       --> TCTCCGGTACTCAGGCGTTCGTGTCACTTACTAATTTGTATCGAAACTCG

               1001   -   1051
UN14132        --> ATTGATTCAAAGAATTATGTTTTTGTGGGTTTTGTTTGTACCATCCTATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY428390       <-- ATTGATTCAAAGAATTATGTTTTTGTGGGTTTTGTTTGTACCATCCTATC
FY428176       <-- ATTGATTCAAAGAATTATGTTTTTGTGGGTTTTGTTTGTACCATCCTATC
FY432668       <-- ATTGATTCAAAGAATTATGTTTTTGTGGGTTTTGTTTGTACCATCCTATC
FY431135       <-- ATTGATTCAAAGAATTATGTTTTTGTGGGTTTTGTTTGTACCATCCTATC
FD538276       <-- ATTGATTAAAAGAAT-ATGTTTTTCTGAGTTTTGTTTGTACCATCCGATC
FD968067       <-- ATTGATTAAAAGAAT-ATGTTTTTTTGAGTTTTGTTTGTACCATCCGATC
EY914431       --> ..................................................
EY906457       --> ..................................................
FD971847       --> ..................................................
EY948743       --> ..................................................
FD542285       --> ..................................................
EX756618       --> ..................................................
FD548524       --> ..................................................
EX756836       --> ..................................................
FD542139       --> ..................................................
FD549298       --> ..................................................
FY435805       --> ..................................................
EY908294       --> ..................................................
FD972100       --> ..................................................
FD972171       --> ..................................................
FY437462       --> ..................................................
EW734095       --> ..................................................
FD540168       --> ..................................................
EY898782       --> ..................................................
EX906030       --> ATTGATTCAAAGAATTGTGTTTTTGTGGGTTTTGTTTGTACCATCCTATC

               1051   -   1101
UN14132        --> GAGACCGGTTGAATATGAAAAAAACGCAAAGTGTGTGATTATTGGTTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY428390       <-- GAGACCGGTTGAATATGAAAAAAACGCAAAGT..................
FY428176       <-- GAGACCGGTTGAATATGAAAAAAACGCAAAGTGTGTGA............
FY432668       <-- GAGACCGGTTGAATATGAAAAAAACGCAAAGT..................
FY431135       <-- GAGACCGGTTGAATATGAAAAAAACGCAAAGT..................
FD538276       <-- GAGACCGGTTGAATATGGAAAAAACGCAAAGTGTGTGATTATTGGTTTGA
FD968067       <-- GAGACCGGTTGAATATGGAAAAAACGCAAAGTGTGTGATTATTGGTTTGA
EY914431       --> ..................................................
EY906457       --> ..................................................
FD971847       --> ..................................................
EY948743       --> ..................................................
FD542285       --> ..................................................
EX756618       --> ..................................................
FD548524       --> ..................................................
EX756836       --> ..................................................
FD542139       --> ..................................................
FD549298       --> ..................................................
FY435805       --> ..................................................
EY908294       --> ..................................................
FD972100       --> ..................................................
FD972171       --> ..................................................
FY437462       --> ..................................................
EW734095       --> ..................................................
FD540168       --> ..................................................
EY898782       --> ..................................................
EX906030       --> GAGACCG...........................................

               1101   -   1151
UN14132        --> TTTTGCTTTGTTTTTTTTCCCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~
FY428390       <-- ........................
FY428176       <-- ........................
FY432668       <-- ........................
FY431135       <-- ........................
FD538276       <-- TTTTGCTT................
FD968067       <-- TTTTGCTTTGTTTTTTTTCCCTTT
EY914431       --> ........................
EY906457       --> ........................
FD971847       --> ........................
EY948743       --> ........................
FD542285       --> ........................
EX756618       --> ........................
FD548524       --> ........................
EX756836       --> ........................
FD542139       --> ........................
FD549298       --> ........................
FY435805       --> ........................
EY908294       --> ........................
FD972100       --> ........................
FD972171       --> ........................
FY437462       --> ........................
EW734095       --> ........................
FD540168       --> ........................
EY898782       --> ........................
EX906030       --> ........................