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Alignment for radish unigene UN14140

               1      -     51
UN14140        --> AGCCGAAACTAATTTTTTTAATCACATAACTTGAAAGATTTGTGTACAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563944       <-- ..................................................
FD966181       <-- ..................................................
FD947561       <-- ..................................................
FD551936       <-- ..................................................
EY906591       <-- ..................................................
EX765756       <-- ..................................................
FD547776       --> AGCCGAAACTAATTTTTTTAATCACATAACTTGAAAGATTTGTGTACAAT
FD943486       --> ..................................................
FD961716       --> ..................................................
EY927899       --> ..................................................
EY902731       --> ..................................................

               51     -    101
UN14140        --> CAAAAAGGAGAGCTGACATATTCAAACTTCTTGACCATTGCAAAGTATAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563944       <-- ..................................................
FD966181       <-- ..................................................
FD947561       <-- ..................................................
FD551936       <-- ..................................................
EY906591       <-- ..................................................
EX765756       <-- ..................................................
FD547776       --> CAAAAAGGAGAGCTGACATATTCAAACTTCTTGACCATTGCAAAGTATAC
FD943486       --> ......................CAAACTTCTTGACCATTGCAAAGTATAC
FD961716       --> ......................cgAACTTCTTGACCATTGCAAAGTATAC
EY927899       --> ..............................................gTAC
EY902731       --> ................................................AC

               101    -    151
UN14140        --> AAAAGAGCATCACATCCTTTACAAAGTCATTTTACTCATACAAAGTCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563944       <-- .................................ACTCATACAAAGTCAAG
FD966181       <-- ..................................................
FD947561       <-- ..................................................
FD551936       <-- ..................................................
EY906591       <-- ..................................................
EX765756       <-- ..................................................
FD547776       --> AAAAGAGCATCACATCCTTTACAAAGTCATTTTACTCGTACAAAGTCAAG
FD943486       --> AAAAGAGCATCACATCCTTTACAAAGTCATTTTACTCGTACAAAGTCAAG
FD961716       --> AAAAGAGCATCACATTCTTTACAAAGTCATTTTACTCATACAAAGTCAAG
EY927899       --> AAAAGAGCATCACATCCTTTACAAAGTCATTTTACTCATACAAAGTCAAG
EY902731       --> AAAAGAGCATCACATCCTTTACAAAGTCATTTTACTCATACAAAGTCAAG

               151    -    201
UN14140        --> CTGCGTCTCCTTAAAACATGGAACCAATACAAAACTCAAGTACGTAAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563944       <-- CTGCGTCTCCTTAAAACATGGAACCAATACAAAACTCAAGTACGTAAAGA
FD966181       <-- ..................................................
FD947561       <-- ..................................................
FD551936       <-- ..................................................
EY906591       <-- ..................................................
EX765756       <-- ..................................................
FD547776       --> CTGCGTCTCCTTAAAACATGGAACCAATACAAAACTCA-GTACGTAAAGA
FD943486       --> CTGCGTCTCCTTAAAACATGGAACCAATACAAAACTCAAGTACGTAAAGA
FD961716       --> CTGCGTCTCCTTAAAACATGGAACCAATACAAAACTCAAGTACGTAAAGA
EY927899       --> CTGCGTCTCCTTAAAACATGGAACCAATACAAAACTCAAGTACGTAAAGA
EY902731       --> CCCCG-CTCCTTAAAACATGGAACCAATACAAAACTCAAGTACGTAAAGA

               201    -    251
UN14140        --> TT-GATGTTTACGCAGAAGCGTCCATGGAAATGGCTCCGTCCTCTTCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563944       <-- TT-GATGTTTACGCAGAAGCGTCCATGGAAATGGCTACGTCCACTTCCTC
FD966181       <-- ..................................................
FD947561       <-- ..................................................
FD551936       <-- ..................................................
EY906591       <-- ..................................................
EX765756       <-- ..................................................
FD547776       --> TT-GATGTTTACGCAGAAGCGTCCATGGAAATGGCTCCGTCCTCTTCCTC
FD943486       --> TT-GATGTTTACGCAAAAGCGTCCATGGAAATGGCTCCGTCCTCTTCCTC
FD961716       --> TTTGATGTTTACGCAAAAGCGTCCATGGAAATGGCTCCGTCCTCTTCCTC
EY927899       --> TT-GATGTTTACGCAGAAGCGTCCATGGAAATGGCTACGTCCACTTCCTC
EY902731       --> TT-GATGTCTACGCAGAAGCGTCCATGGAAATGGCTACGTCCTCTTCCTC

               251    -    301
UN14140        --> TCCAGTGGCTAGTTTAGCTTCTTTTGGTTTGTGAGAATCCTCGACGACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563944       <-- TCCAGTGGCTAGTTTAGCTTCTTTTGGTTCGTGAGAATCCTCGACGACAT
FD966181       <-- ..................................................
FD947561       <-- ..................................................
FD551936       <-- ..................................................
EY906591       <-- ..................................................
EX765756       <-- ..................................................
FD547776       --> TCCAGTGGCTAGTTTAGCTTCTTTTGGTTTGTGAGAATCCTCGACGACAT
FD943486       --> TCCAGTGGCTAGTTTAGCTTCTTTTGGTTTGTGAGAATCCTCGACGACAT
FD961716       --> TCCAGTGGCTAGTTTAGCTTCTTTTGGTTTGTGAGAATCCTCGACGACAT
EY927899       --> TCCAGTGGCTAGTTTAGCTTCTTTTGGTTCGTGAGAATCCTCGACGACAT
EY902731       --> TCCAGTGGCTAGTTTAGCTTCTTTTGGTTTGTGAGAATCCTCGACGACAT

               301    -    351
UN14140        --> CCGCCTGTTTCAGTGCTTGTGCTCGGAACCCGACCATTAACTCCTCTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563944       <-- CCGCCTGTTTCAGTGCTTGTGCTCGGAATCCGACCATTAACTCCTCTGCT
FD966181       <-- ........TTCAGTGCTTGTGCTCGGAACCCGACCATTAACTCCTCTGCT
FD947561       <-- ..................................................
FD551936       <-- ..................................................
EY906591       <-- ..................................................
EX765756       <-- ..................................................
FD547776       --> CCGCCTGTTTCAGTGCTTGTGCTCGGAACCCGACCATTAACTCCTCTGCT
FD943486       --> CCGCCTGTTTCAGTGCTTGTGCTCGGAACCCGACCATTAACTCCTCCGCT
FD961716       --> CCGCCTGTTTCAGTGCTTGTGCTCGGAACCCGACCATTAACTCCTCTGCT
EY927899       --> CCGCCTGTTTCAGTGCTTGTGCTCGGAATCCGACCATTAACTCCTCTGCT
EY902731       --> CCGCCTGTTTCAGTGCTTGTGCTCGGAACCCGACCATTAACTCCTCTGCT

               351    -    401
UN14140        --> TTTTCAAGCGTCGACAACAGCTCCCCATAGCGTGCTTGCAGTTTCCGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563944       <-- TTTTCAAGCGTTGACAACAGCTCCCCATAGCGTGCTTGCAGTTTCCGCTC
FD966181       <-- TTTTCAAGCGTCGACAACAGCTCCCCATAGCGTGCTTGCAGTTTCCGCTC
FD947561       <-- ..................................................
FD551936       <-- ..................................................
EY906591       <-- ..................................................
EX765756       <-- ..................................................
FD547776       --> TTTTCAAGCGTCGACAACAGCTCCCCATAGCGTGCTTGCAGTTTCCGCTC
FD943486       --> TTTTCAAGC.........................................
FD961716       --> TTTTCAAGCGTCGACAACAGCTCCCCATAGCGTGCTTGCAGTTTCCGCTC
EY927899       --> TTTTCAAGCGTTGACAACAGCTCCCCATAGCGTGCTTGCAGTTTCCGCTC
EY902731       --> TTTTCAAGCGTCGACAACAGCTCCCCATAGCGTGCCTGCAGTTTTCGCTC

               401    -    451
UN14140        --> CGTCTCCTTTTGCTTTATCACTTCTTCCTCCAGATTCTTCTTCCTGAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563944       <-- CGTCTCCTTTTGCTTTATCACTTCTTCCTCCAGATTCTTCTTCCTGAAAG
FD966181       <-- CGTCTCCTTTTGCTTTATCACTTCTTCCTCCAGATTCTTCTTCCTGAAAG
FD947561       <-- ..................................................
FD551936       <-- ..................................................
EY906591       <-- ..................................................
EX765756       <-- ..................................................
FD547776       --> TGTCTCCTTTTGCTTTATCACTTCTTCCTCCAGATTCTTCTTCCTGAAAG
FD943486       --> ..................................................
FD961716       --> CGTCTCCTTTTGCTTTATCACTTCTTCCTCCAGATTCTTCTTCCTGAAAG
EY927899       --> CGTCTCCTTTTGCTTTATCACTTCTTCCTCCAGATTCTTCTTCCTGAAAG
EY902731       --> CGTCTCCTTTTGCTTTATCACTTCTTCCTCCAGATTCTTCTTCCTGAAAG

               451    -    501
UN14140        --> ACGCAGCCATCTCTTCTTGCCTCTTCAATGCTTTAAAGCACTCTACTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563944       <-- ACGCAGCCATCTCTTCTTGCCTCTTCAATGCTTTAAAGCACTCCACTTCT  Raphanus sativus var. oleiformis
FD966181       <-- ACGCAGCCATCTCTTCTTGCCTCTTCAATGCTTTAAAGCACTCTACTTCT  Raphanus raphanistrum subsp. maritimus
FD947561       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD551936       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906591       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX765756       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547776       --> ATGCAGCCATCTCTTCTTGCCTCTTCAATGCTTTAAAGAACTCCACTTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD943486       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD961716       --> ACGCAGCCATCTCTTCTTGCCTCTTCAATGCTTTAAAGCACTCTACTTCT  Raphanus raphanistrum subsp. maritimus
EY927899       --> ACGCAGCCATCTCTTCTTGCCTCTTCAATGCTTTAAAGCGCTCCACTTCT  Raphanus sativus var. oleiformis
EY902731       --> ATGCAGCCATCTCTTCTTGCCTCTTCAATGCTTTAAAGCACTCTACTTCT  Raphanus raphanistrum subsp. raphanistrum (MS)

               501    -    551
UN14140        --> GTTCCACCAATCTCAATCTGCTTTAAACTCGCCTCTATTTGGCTCCACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563944       <-- GTTCCACCAATCTCAATCTGCTTTAGACTCGCCTCTATTTGGCTCCACAC
FD966181       <-- GTTCCACCGATCTCAATCTGCTTTAAACTCGCCTCTATTTGGCTCCACAC
FD947561       <-- ..................................................
FD551936       <-- ..................................................
EY906591       <-- ..................................................
EX765756       <-- ..................................................
FD547776       --> GTTCCACCAATCTCAATCTGTTTTAAACTCGCCTCTATTTGGCTCCACAC
FD943486       --> ..................................................
FD961716       --> GTTCCACCGATCTCAA..................................
EY927899       --> GTTCCACCAATCTCAATCTGCTTTAGACTCGCCTCTATTTGGCTCCACAC
EY902731       --> GTTCCACCAATCTCAATCTGCTTTAAACTCGCCTCTATTTGGCTCCACAC

               551    -    601
UN14140        --> AGTCTCTGCCCTTTTCTCATGACCCTTTGTATAAGTTTTATACTTAGCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563944       <-- AGTCTCTGCCCTTTTCTCATGACACTTTGTATAAGTTTTATACTTAGCCT
FD966181       <-- AGTCTCTGCCCTTTTCTCATGACCCTTTGTATAAGTTTTATACTTAGCCT
FD947561       <-- ................................AAGTTTTATACTTAGCCT
FD551936       <-- ..................................................
EY906591       <-- ..................................................
EX765756       <-- ..................................................
FD547776       --> AGTCTCTGCCCTTTTCTCATGACCCTTTGTGTAAGTTTTATACTTAGCCT
FD943486       --> ..................................................
FD961716       --> ..................................................
EY927899       --> AGTCTCTGCCCTTTTCTCATGACCCTTTGTATAAGTTTTATACTTAGCCT
EY902731       --> AGTCTCTGCCCTTTTCTCATGACCCTTTGTATAAGTTTTATACTTAGCCT

               601    -    651
UN14140        --> TCATGTGTTCTGCCTTCTTCTCATCCTCCTCCATCTTTTTCTTCGCATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563944       <-- TCATGTGTTCTGCCTTCTTCTCATCTTCCTCCATCTTTTTCTTCGCATTC
FD966181       <-- TCATGTGTTCTGCCTTCTTCTCATCCTCTTCCATCTTTTTCTTCGCATTC
FD947561       <-- TCATGTGTTCTGCCTTCTTCTCATCCTCCTCCATCTTTTTCTTCGCATTC
FD551936       <-- ......................ATCCTCCTCCATCTTTT-CTTCGCAT-C
EY906591       <-- ..................................................
EX765756       <-- ..................................................
FD547776       --> TCATGTGTTCTGCCTTCTTCTCATCCTCCTCCATCTTTTTCTTCGCATTC
FD943486       --> ..................................................
FD961716       --> ..................................................
EY927899       --> TCATGTGTTCTGCCTTCTTCTCATCTTCCTCCATCTTTTTCTTCGCATTC
EY902731       --> TCATGTGTTCTGCCTTCTTCTCATCCTCCTCCATCTTTTTCTTCGCATTC

               651    -    701
UN14140        --> TCCATCTCCACTTGCAACGCTGCAACTTTCTCTGCCTTCACGGCAACACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563944       <-- TCCATCTCCACTTGCAACGCTGCAACCTTCTCTGCCTTCACGGCAACACT  Raphanus sativus var. oleiformis
FD966181       <-- TCCATCTCCACTTGCAACGCTGCAACTTTCTCTGCCTTCACGGCAACACT  Raphanus raphanistrum subsp. maritimus
FD947561       <-- TCCATCTCGACTTGCAACGCTGCAACTTTCTCTGCCTTCACGGCAACACT  Raphanus sativus cv Early Scarlet Globe
FD551936       <-- TCCATCTCGACTTGCAACGCTGCAACTTTCTCTGC-TTCACGGCAACACT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY906591       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX765756       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547776       --> TCCATCTCGACTTGCAACGCTGCAACTTTCTCTGCCTTCACGGCAACACT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD943486       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD961716       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY927899       --> TCCATCTCCACTTGCAACGCTGCAACTTTCTCTGCCTTCACGGCAACACT  Raphanus sativus var. oleiformis
EY902731       --> TCCATCTCCACTTGCAACGCTGCAACTTTCTCTGCCTTCACGGCGACACT  Raphanus raphanistrum subsp. raphanistrum (MS)

               701    -    751
UN14140        --> TGAGGGCCCGTAAGCATTTCGAGTGGGGAAGTACATGATATCCTTCACGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563944       <-- TGAGGGCCCGTAAGCATTTCGAGTGGGGAAGTACATGATATCCTTTACGC
FD966181       <-- TGAGGGCCCGTAAGCATTTCGAGTGGGGAAGTACATGATATCCTTCACGC
FD947561       <-- TGAGGGCCCGTAAGCATTTCGAGTGGGGAAGTACATGATATCCTTCACGC
FD551936       <-- TGAGGGCCCGTAAGCATTTCGAGTGGGGAAGTACATGATATCCTTCACGC
EY906591       <-- ..................................................
EX765756       <-- ..................................................
FD547776       --> TGAGGGCCCGTAAGCATTT...............................
FD943486       --> ..................................................
FD961716       --> ..................................................
EY927899       --> TGAGGGCCCGTAAGCATTTCGAGTGGGGAAGTACATGATATCCTTTACGC
EY902731       --> TGAGGGCCCGTAAGCATTTCGAGTGGGGA.....................

               751    -    801
UN14140        --> AATCGTCGTGAGCTACTACGAACTCGTCAAATGTCTTGCTCTCGTTTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563944       <-- AATCGTCGTGAGCTACTACGAACTCGTCAAATGTCTTGCTCTCGTTTCCC
FD966181       <-- AATCGTCGTGAGCTACTACGAACTCGTCAAATGTCTTGCTCTCGTTTCCC
FD947561       <-- AATCGTCGTGAGCTACTACGAACTCGTCAAATGTCTTGCTCTCGTTTCCC
FD551936       <-- AATCGTCGTGAGCTACTACGAACTCGTCAAATGTCTTGCTCTCGTTTCCC
EY906591       <-- ..................................................
EX765756       <-- ..................................................
FD547776       --> ..................................................
FD943486       --> ..................................................
FD961716       --> ..................................................
EY927899       --> AATCGTCGTGAGCTACTACGAACTCGTCAAATGTCTTGCTCTCGTTTCCC
EY902731       --> ..................................................

               801    -    851
UN14140        --> ATTGCCGCGCAAAGAAATTGTGCCTCCTCCTTTATCATTTTGTCAGCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563944       <-- ATTGCCGCGCAAAGAAATTGTGCCTCCTCCTTAATCATTTTGTCAGCCTC
FD966181       <-- ATTGCCGCGCAAAGAAATTGTGCCTCCTCCTTTATCATTTTGTCAGCCTC
FD947561       <-- ATTGCCGCGCAAAGAAATTGTGCCTCCTCCTTTATCATTTTGTCAGCCTC
FD551936       <-- ATTGCCGCGCAAAGAAATTGTGCCTCCTCCTTTATCATTTTGTCAGCCTC
EY906591       <-- ..........................................TCAGCCTC
EX765756       <-- ..................................................
FD547776       --> ..................................................
FD943486       --> ..................................................
FD961716       --> ..................................................
EY927899       --> ATTGCCGCGCAAAGAAATTGTGCCTCCTCCTTAATCATTTTGTCAGCC..
EY902731       --> ..................................................

               851    -    901
UN14140        --> TAGGAGTTCATTTTCCTCAAAGTCTTCAATTGCAGGAACTTGAGAACCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563944       <-- TAGGAGTTCATTTTCCTCAAAGTCTTCAATTGTAGGAACTTGAGAGCCAG
FD966181       <-- TAGGAGTTCATTTTCCTCAAAGTCTTCAATTGCAGTAACTTGAGAACCAG
FD947561       <-- TAGGAGTTCATTTTCCTCAAAGTCTTCAATTGCAGGAACTTGAGAACCAG
FD551936       <-- TAGGAGTTCATTTTCCTCAAAGCCTTCAATTGCAGGAACTTGAGAACCAG
EY906591       <-- TAGGAGTTCATTTTCCTCAAAGTCTTCAATTGCAGGAACTTGAGAACCAG
EX765756       <-- ..................................................
FD547776       --> ..................................................
FD943486       --> ..................................................
FD961716       --> ..................................................
EY927899       --> ..................................................
EY902731       --> ..................................................

               901    -    951
UN14140        --> AACTGTTAGCACGGTTCTTGGCTCCTTTCTTTTTCTCAGCTTTCTCATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563944       <-- AACTGTTAGCACGGTTCATGGCTCCTc.......................
FD966181       <-- AGCTGTTAGCACGGTTCTTGGCT...........................
FD947561       <-- AACTGTTAGCACGGTTCTTGGCTCCTTTCTTTTTCTCAGCTTTCTCATCA
FD551936       <-- AACTGTTAGCACGGTTCCTGGCTCCTTTCTTTTTCTCAGCTTTCTCATCA
EY906591       <-- AACTGCTAGCACGGTTCTTGGCTCCTTTCTTTTTCTCAGCTTTCTCATCA
EX765756       <-- ..................................................
FD547776       --> ..................................................
FD943486       --> ..................................................
FD961716       --> ..................................................
EY927899       --> ..................................................
EY902731       --> ..................................................

               951    -   1001
UN14140        --> AGAGGATACTTTGCATTATCATGCTCCAGCAACTGTAGAAGCTCCTCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563944       <-- ..................................................
FD966181       <-- ..................................................
FD947561       <-- AGAGGATACTTTGCATTATCATGCTCCAGCAACTGTAGAAGCTCCTCTCT
FD551936       <-- AGAGGATACTTTGCATTATCATGCTCCAGCAACTGTAGAAGCTCCTCTCT
EY906591       <-- AGAGGATACTTTGCATTATCATGCTCCAGTAACTGTAGAAGCTCCTCTCG
EX765756       <-- ..................................................
FD547776       --> ..................................................
FD943486       --> ..................................................
FD961716       --> ..................................................
EY927899       --> ..................................................
EY902731       --> ..................................................

               1001   -   1051
UN14140        --> TACCATTTCATCTGCAACATCAACTGCACTAGGAGGGACAACAGAACTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563944       <-- ..................................................
FD966181       <-- ..................................................
FD947561       <-- TACCATTTCATCTGCAACATCAACTGCACTAGGAGGGACAACAGAACTTT
FD551936       <-- TACCATTTCATCTGCAACATCAACTGCACTAGGAGGGACAACAGAACTTT
EY906591       <-- TACCATTTCATCAGCAACATCAACTGGACTAGGAGGAACAACAGAACTTT
EX765756       <-- ................................GAGGGACAACAGAACTTT
FD547776       --> ..................................................
FD943486       --> ..................................................
FD961716       --> ..................................................
EY927899       --> ..................................................
EY902731       --> ..................................................

               1051   -   1101
UN14140        --> TATCTCGGTTCGCTGAAAGCAACGAATTCCTAATTAGTTCCAACGAAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563944       <-- ..................................................
FD966181       <-- ..................................................
FD947561       <-- TATCTCGGTTCGCTGAAAGCAACGAATTCCTAATTAGTTCCAACGAAGCT
FD551936       <-- TATCTCGGTTCGCTGAAAGCAACGAATTCCTAATTAGTTCCAACGAAGCT
EY906591       <-- TATCTCGGTTCGCTGAAAGCAAAGAATTCCTAATTAGTTCCAACGAAGCT
EX765756       <-- TATCTCGGTTCGCTGAAAGCAAAGAATTCCTAATTAGTTCCAACGAAGCT
FD547776       --> ..................................................
FD943486       --> ..................................................
FD961716       --> ..................................................
EY927899       --> ..................................................
EY902731       --> ..................................................

               1101   -   1151
UN14140        --> GCTGGAGGTCTAGGAAGATCTCTCTGCAAAACCTTGGACCTTTTCCTAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563944       <-- ..................................................
FD966181       <-- ..................................................
FD947561       <-- GCTGGAGGTCTAGGAAGATCTCTCTGCAAAACCTTGGACCTTTTCCTAAG
FD551936       <-- GCTGGAGGTCTAGGAAGATCTCTCTGCAAAACCTTGGACCTTTTCCTAAG
EY906591       <-- GCTGGAGGTCTAGGAAGGTCTCTCTGCAAAACCTTGGACCTATTCCTAAG
EX765756       <-- GCTGGAGGTCTGGGAAGATCTCTTTGCAAAACCTTGGACCTTTTCCTAAG
FD547776       --> ..................................................
FD943486       --> ..................................................
FD961716       --> ..................................................
EY927899       --> ..................................................
EY902731       --> ..................................................

               1151   -   1201
UN14140        --> CAGCGCTTGGTGTCTTGCTTCCTCCTCAGCCTTTTCCCTAGCTATCTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563944       <-- ..................................................
FD966181       <-- ..................................................
FD947561       <-- CAGCGCTTGGTGTCTTGCTTCCTCCTCAGCCTTTTCCCc...........
FD551936       <-- CAGCGCTTGGTGTCTTGCTTCCTCCTCAGCCTTTTCCCTAGCTATCTTGT
EY906591       <-- CAGCGCTTGGTATCTTGCTTCCTCCTCAGCCTTTTCCCTAGCTATCTTGT
EX765756       <-- GAGCGCTTGGTATCTTGCTTCCTCCTCAGCCTTTTCCCTAGCTATCTTAT
FD547776       --> ..................................................
FD943486       --> ..................................................
FD961716       --> ..................................................
EY927899       --> ..................................................
EY902731       --> ..................................................

               1201   -   1251
UN14140        --> CTGACATGTCTTCCTCAATTTTCTCTTCTGGCTCTTCACTTTCTTCCGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563944       <-- ..................................................
FD966181       <-- ..................................................
FD947561       <-- ..................................................
FD551936       <-- CTGACATGTCTTCCTCAATTTTCTCTTCTGGCTCCTCACTTTCTTCCGGA
EY906591       <-- CTGACATGTCTTCCTCAATTTTCTCTTCTGGCTCTTCACTTTCTTCCGGA
EX765756       <-- CTGACATGTCTTCCTCAATTTTCTCTTCTGGCTCTTCACTTTCTTCCGGA
FD547776       --> ..................................................
FD943486       --> ..................................................
FD961716       --> ..................................................
EY927899       --> ..................................................
EY902731       --> ..................................................

               1251   -   1301
UN14140        --> GGAGGTTGTGCAACTATATGGTATTCATTCTTTGGCTGAGGAAGCCCAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563944       <-- ..................................................
FD966181       <-- ..................................................
FD947561       <-- ..................................................
FD551936       <-- GGAGGTTGTGCAACTATATGATATTCATTCTTTGGCTGAGGAAGCCCAGT
EY906591       <-- GGAGGTTGTGCAACTATGTGGTATTCGTTCTTTGGCTGAGGAAGCCCAGT
EX765756       <-- GGAGGTTGTGCAACTATATGGTAT-CATTCTTTGGCTGAGGAAGCCCAGT
FD547776       --> ..................................................
FD943486       --> ..................................................
FD961716       --> ..................................................
EY927899       --> ..................................................
EY902731       --> ..................................................

               1301   -   1351
UN14140        --> CAGACCAGAGCGTAAGCTCATCCTAGCTTCCTCTCGTCTCTGCCTCTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563944       <-- ..................................................
FD966181       <-- ..................................................
FD947561       <-- ..................................................
FD551936       <-- CAGACCAGAGCGTAAGCTCATCCTAGCTTCCTCTCGTCTCTGCCTCTCAA
EY906591       <-- CAGACCAGAGCGTAAGCTCATCCTAGCTTCCTCTCGTCTCTGCCTCTCAA
EX765756       <-- CAGACCAGAGCGTAAGCTCATCCTAGCTTCCTCc................
FD547776       --> ..................................................
FD943486       --> ..................................................
FD961716       --> ..................................................
EY927899       --> ..................................................
EY902731       --> ..................................................

               1351   -   1401
UN14140        --> GTTTTGCACTTTCGTGCATGTCCATGTCTTCATTTATGTGAAGTTCATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563944       <-- ..................................................
FD966181       <-- ..................................................
FD947561       <-- ..................................................
FD551936       <-- GTTTTGCACTTTCGTGCATGTCCATGTCTTCATTTATGc...........
EY906591       <-- GTTTTGCACTTTCGTGCATGTCCATATCTTCATTTATGTGAAGTTCATCC
EX765756       <-- ..................................................
FD547776       --> ..................................................
FD943486       --> ..................................................
FD961716       --> ..................................................
EY927899       --> ..................................................
EY902731       --> ..................................................

               1401   -   1451
UN14140        --> CTGAAGGGAGTACCTCTGGGTGTCATAGCAAAAGAAGAACCCTCCCTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563944       <-- ..................................................
FD966181       <-- ..................................................
FD947561       <-- ..................................................
FD551936       <-- ..................................................
EY906591       <-- CTGAAGGGAGTACCTCTGGGTGTCATAGCAAAAGAAGAACCCTCCCTTGA
EX765756       <-- ..................................................
FD547776       --> ..................................................
FD943486       --> ..................................................
FD961716       --> ..................................................
EY927899       --> ..................................................
EY902731       --> ..................................................

               1451   -   1501
UN14140        --> TGGCGTACCACCAATTCCGGGAGTAAGACTAGCACCACCAATTCTGGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD563944       <-- ..................................................
FD966181       <-- ..................................................
FD947561       <-- ..................................................
FD551936       <-- ..................................................
EY906591       <-- TGGCGTACCACCAATTCCGGGAGTAAGACTAGCACCACCAATTCTGGGAG
EX765756       <-- ..................................................
FD547776       --> ..................................................
FD943486       --> ..................................................
FD961716       --> ..................................................
EY927899       --> ..................................................
EY902731       --> ..................................................

               1501   -   1551
UN14140        --> TAAGGCCAGCACCACCGGGCGTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~
FD563944       <-- .........................
FD966181       <-- .........................
FD947561       <-- .........................
FD551936       <-- .........................
EY906591       <-- TAAGGCCAGCACCACCGGGCGTCCC
EX765756       <-- .........................
FD547776       --> .........................
FD943486       --> .........................
FD961716       --> .........................
EY927899       --> .........................
EY902731       --> .........................