1      -     51
UN14170        --> ACGGATAATGAGAGTACTTAAATGTGAATCCAAATAAATATTTCAAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV534899       <-- ACGGATAATGAGAGTACTTAAATGTGAATCCAAATAAATATTTCAAGAAA
FD564474       <-- ....................AATGTGAATCCAAATAAATATTTCAAGAAA
EW715254       <-- .......................GTGAATCCAAATAAATATTTCAAGAAA
FD543953       <-- ............................TCCAAATAAATATTTCAAGAAA
FD567952       --> ....................AATGTGAATCCAAATAAATATTTCAAGAAA
EW719249       --> ......................TGTGAATCCAAATAAATATTTCAAGAAA
FD539668       --> ..................................................
EV539699       --> ..................................................
EW721569       --> ..................................................

               51     -    101
UN14170        --> GTTACCACAAAAATTCAAAAGACAAAGTTTCAAAGAAAATTGATAACAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV534899       <-- GTTACCACAAAAATTCAAAAGACAAAGTTTCAAAGAAAATTGATAACAAT
FD564474       <-- GTTACCACAAAAATTCAAAAGACAAAGTTTCAAAGAAAATTGATAACAAT
EW715254       <-- GTTACCACAAAAATTCAAAAGACAAAGTTTCAAAGAAAATTGATAACAAT
FD543953       <-- GTTACCACAAAAATTCAAAAGACAAAGTTTCAAAGAAAATTGATAACAAT
FD567952       --> GTTACCACAAAAATTCAAAAGACAAAGTTTCAAAGAAAATTGATAACAAT
EW719249       --> GTTACCACAAAAATTCAAAAGACAAAGTTTCAAAGAAAATTGATAACAAT
FD539668       --> ........AAAAATTCAAAAGACAAAGTTTCAAAGAAAATTGATAACAAT
EV539699       --> ..................................................
EW721569       --> ..................................................

               101    -    151
UN14170        --> AGCTAAACATAATAGAATGAAAAGTCTCTTTTCCCCATAGAAAACTTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV534899       <-- AGTTAAACATAATAGAATGAAAAGTCTCTTTTCCCCATAGAAAACTTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD564474       <-- AGCTAAACATAATAGAATGAAAAGTCTCTTTTCCC-ATAGAAAACTTCAA  Raphanus sativus var. oleiformis
EW715254       <-- AGCTAAACATAATAGAATGAAAAGTCTCTTTTCCCCATAGAAAACTTCAA  Raphanus sativus var. oleiformis
FD543953       <-- AGTTAAACATAATAGAATGAAAAGTCTCTTTTCCCCATAGAAAACTTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD567952       --> AGCTAAACATAATAGAATGAAAAGTCTCTTTTCCC-ATAGAAAACTTCAA  Raphanus sativus var. oleiformis
EW719249       --> AGCTAAACATAATAGAATGAAAAGTCTCTTTTCCCCATAGAAAACTTCAA  Raphanus sativus var. oleiformis
FD539668       --> AGTTAAACATAATAGAATGAAAAGTCTCTTTTCCCCATAGAAAACTTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV539699       --> .............................................TTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW721569       --> ..................................................  Raphanus sativus var. oleiformis

               151    -    201
UN14170        --> TAGAAGAAACCGAGGACCTTGCCTCCAACATTCTTTCTCCTCGCTTCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV534899       <-- TAGAAGAAACCGAGGACCTTGCCTCCAACATTCTTTCTCCTCGCTTCTTC
FD564474       <-- TAGAAGAAACCGAGGACCTTGCCTCCAACATTCTTTCTCCTCGCTTCTTC
EW715254       <-- TAGAAGAAACCGAGGACCTTGCCTCCAACATTCTTTCTCCTCGCTTCTTC
FD543953       <-- TAGAAGAAACCGAGGACCTTGCCTCCAACATTCTTTCTCCTCGCTTCTTC
FD567952       --> TAGAAGAAACCGAGGACCTTGCCTCCAACATTCTTTCTCCTCGCTTCTTC
EW719249       --> TAGAAGAAACCGAGGACCTTGCCTCCAACATTCTTTCTCCTCGCTTCTTC
FD539668       --> TAGAAGAAACCGAGGACCTTGCCTCCAACATTCTTTCTCCTCGCTTCTTC
EV539699       --> TAGAAAAAACCGAGGACCTTGCCTCCAACATTCTTTCTCCTCGCTTCTTC
EW721569       --> .......AACCGAGGACCTTGCCTCCAACATTCTTTCTCCTCGCTTCTTC

               201    -    251
UN14170        --> ATGGTCCATAATCCCAGCTGAAGTAGTCAACACGATGTACCCAAACTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV534899       <-- ATGGTCCATAATCCCAACTGAAGTTGTCAACACGATGTACCCAAACTGTC
FD564474       <-- ATGGTCCATAATCCCAGCTGAAGTAGTCAACACGATGTACCCAAACTGTC
EW715254       <-- ATGGTCCATAATCCCAGCTGAAGTAGTCAACACGATGTACCCAAACTGTC
FD543953       <-- ATGGTCCATAATCCCAGCTGAAGTAGTCAACACGATGTACCCAAACTGTC
FD567952       --> ATGGTCCATAATCCCAGCTGAAGTAGTCAACACGATGTACCCAAACTGTC
EW719249       --> ATGGTCCATAATCCCAGCTGAAGTAGTCAACACGATGTACCCAAACTGTC
FD539668       --> ATGGTCCATAATCCCAGCTGAAGTAGTCAACACGATGTACCCAAACTGTC
EV539699       --> ATGGTCCATAATCCCAACTGAAGTTGTCAACACGATGTACCCAAACTGTC
EW721569       --> ATGGTCCATAATCCCAGCTGAAGTAGTCAACACGATGTACCCAAACTGTC

               251    -    301
UN14170        --> TGGAAGGGAGCAAACGAGCAGTCCAACTTTCAATCTCCTTAACACCAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV534899       <-- TGGAAGGGAGCAAACGAGCAGTCCAACTTTCAATCTCCTTAACACCAACA
FD564474       <-- TGGAAGGGAGCAAACGAGCAGTCCAACTTTCAATCTCCTTAACACCAACA
EW715254       <-- TGGAAGGGAGCAAACGAGCAGTCCAACTTTCAATCTCCTTAACACTAACA
FD543953       <-- TGGAAGGGAGCAAACGAGCAGTCCAACTTTCAATCTCCTTAACACCAACA
FD567952       --> TGGAAGGGAGCAAACGAGCAGTCCAACTTTCAATCTCCTTAACACCAACA
EW719249       --> TGGAAGGGAGCAAACGAGCAGTCCAACTTTCAATCTCCTTAACACTAACA
FD539668       --> TGGAAGGGAGCAAACGAGCAGTCCAACTTTCAATCTCCTTAACACCAACA
EV539699       --> TGGAAGGGAGCAAACGAGCAGTCCAACTTTCAATCTCCTTAACACCAACA
EW721569       --> TGGAAGGGAGCAAACGAGCAGTCCAACTTTCAATCTCCTTAACACTAACA

               301    -    351
UN14170        --> TCAAAACGAGGACTGATAACACCACACTTGTTCAACCTCCCGTTCAATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV534899       <-- TCAAAACGAGGACTGATAACACCACACTTGTTCAACCTCCCGTTCAATTC
FD564474       <-- TCAAAACGAGGACTGATAACACCACACTTGTTCAACCTCCCGTTCAATTC
EW715254       <-- TCAAAACGAGGACTGATAACACCACACTTGTTCAACCTCCCGTCCAATTC
FD543953       <-- TCAAAACGAGGACTGATAACACCACACTTGTTCAACCTCCCGTTCAATTC
FD567952       --> TCAAAACGAGGACTGATAACACCACACTTGTTCAACCTCCCGTTCAATTC
EW719249       --> TCAAAACGAGGACTGATAACACCACACTTGTTCAACCTCCCGTCCAATTC
FD539668       --> TCAAAACGAGGACTGATAACACCACACTTGTTCAACCTCCCGTTCAATTC
EV539699       --> TCAAAACGAGGACTGATAACACCACACTTGTTCAACCTCCCGTTCAATTC
EW721569       --> TCAAAACGAGGACTGATAACACCACACTTGTTCAACCTCCCGTCCAATTC

               351    -    401
UN14170        --> CACAACGATTTTGCCAGATCGGTGGTCATCGACGTACTCAAACTCACCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV534899       <-- CACAACGATTTTGCCGGATCGGTGGTCATCGACGTACTCAAACTCACCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD564474       <-- CACAACGATTTTGCCAGATCGGTGGTCATCGACGTACTCAAACTCACCAA  Raphanus sativus var. oleiformis
EW715254       <-- CACAACGATTTTGCCAGATCGGTGGTCATCGACGTACTCAAACTCACCAA  Raphanus sativus var. oleiformis
FD543953       <-- CACAACGATTTTGCCGGATCGGTGGTCATCGACGTACTCAAACTCACCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD567952       --> CACAACGATTTTGCCAGATCGGTGGTCATCGACGTACTCAAACTCACCAA  Raphanus sativus var. oleiformis
EW719249       --> CACAACGATTTTGCCAGATCGGTGGTCATCGACGTACTCAAACTCACCAA  Raphanus sativus var. oleiformis
FD539668       --> CACAACGATTTTGCCGGATCGGTGGTCATCGACGTACTCAAACTCACCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV539699       --> CACAACGATTTTGCCGGATCGGTGGTCATCGACGTACTCAAACTCACCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW721569       --> CACAACGATTTTGCCAGATCGGTGGTCATCGACGTACTCAAACTCACCAA  Raphanus sativus var. oleiformis

               401    -    451
UN14170        --> TGTAACCGTGCTTCTGCATGACGATGAGAAACTTAATGATGACTTTTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV534899       <-- TGTAACCGTGCTTCTGCATGACGATGAGAAACTTGATGATGACTTTTGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD564474       <-- TGTAACCGTGCTTCTGCATGACGATGAGAAACTTAATGATGACTTTTGAG  Raphanus sativus var. oleiformis
EW715254       <-- TGTAACCGTGCTTCTGCATGACGATGAGAAACTTAATGATGACTTTTGAG  Raphanus sativus var. oleiformis
FD543953       <-- TGTAACCGTGCTTCTGCATGACGATGAGAAACTTGATGATGACTTTTGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD567952       --> TGTAACCGTGCTTCTGCATGACGATGAGAAACTTAATGATGACTTTTGAG  Raphanus sativus var. oleiformis
EW719249       --> TGTAACCGTGCTTCTGCATGACGATGAGAAACTTAATGATGACTTTTGAG  Raphanus sativus var. oleiformis
FD539668       --> TGTAACCGTGCTTCTGCATGACGATGAGAAACTTGATGATGACTTTTGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV539699       --> TGTAACCGTGCTTCTGCATGACAATGAAAAACTTGATGATGACTTTTGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW721569       --> TGTAACCGTGCTTCTGCATGACGATGAAAAACTTAATGATGACTTTTGAG  Raphanus sativus var. oleiformis

               451    -    501
UN14170        --> GAAGGCCTGATCATGACCTGCCTCTTGCCACGTTTCTCTGCATTGAACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV534899       <-- GAAGGCCTGATCATGACTTGCCTCTTGCCACGTTTCTCGGCATTGAACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD564474       <-- GAAGGCCTGATCATGACCTGCCTCTTGCCACGTTTCTCTGCATTGAACAT  Raphanus sativus var. oleiformis
EW715254       <-- GAAGGCCTGATCATGACCTGCCTCTTGCCACGTTTCTCTGCATTGAACAT  Raphanus sativus var. oleiformis
FD543953       <-- GAAGGCCTGATCATGACCTGCCTCTTGCCACGTTTCTCGGCATTGAACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD567952       --> GAAGGCCTGATCATGACCTGCCTCTTGCCACGTTTCTCTGCATTGAACAT  Raphanus sativus var. oleiformis
EW719249       --> GAAGGCCTGATCATGACCTGCCTCTTGCCACGTTTCTCTGCATTGAACAT  Raphanus sativus var. oleiformis
FD539668       --> GAAGGCCTGATCATGACCTGCCTCTTGCCACGTTTCTCGGCATTGAACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV539699       --> GAAGGCCTGATCATGACTTGCCTCTTGCCACGTTTCTCGGCATTGAACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW721569       --> GAAGGCCTGATCATGACCTGCCTCTTGCCACGTTTCTCTGCATTGAACAT  Raphanus sativus var. oleiformis

               501    -    551
UN14170        --> GCTCTTGAGAGCATCGTTGAGCACACTGATTCTTACCATTTTCTCCTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV534899       <-- GCTCTTGAGAGCATCGTTGAGCACACTGATTCTCACCGTTTTCTCCTTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD564474       <-- GCTCTTGAGAGCATCGTTGAGCACACTGATTCTTACCATTTTCTCCTTAA  Raphanus sativus var. oleiformis
EW715254       <-- GCTCTTGAGAGCATCGTTGAGCACACTGATTCTTACCATTTTCTCCTTAA  Raphanus sativus var. oleiformis
FD543953       <-- GCTCTTGAGAGCATCGTTGAGCACACTGATTCTCACCATTTTCTCCTTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD567952       --> GCTCTTGAGAGCATCGTTGAGCACACTGATTCTTACCATTTTCTCCTTAA  Raphanus sativus var. oleiformis
EW719249       --> GCTCTTGAGAGCATCGTTGAGCACACTGATTCTTACCATTTTCTCCTTAA  Raphanus sativus var. oleiformis
FD539668       --> GCTCTTGAGAGCATCGTTGAGCACACTGATTCTCACCATTTTCTCCTTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV539699       --> GCTCTTGAGAGCATCGTTGAACACACTGATTCTCACCGTTTTCTCCTTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW721569       --> GCTCTTGAGAGCATCGTTGAGCACACTGATTCTTACCATTTTCTCCTTAA  Raphanus sativus var. oleiformis

               551    -    601
UN14170        --> GCTCAAGCCTCTTCTTAGACTGGCAGCTCGGGAGGCAGGTCGCTTAGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV534899       <-- GCTCAAGCCTCTTCTTAGATTGGCAGCTCGGGAGGCAGGTCGCTCAGTGA
FD564474       <-- GCTCAAGCCTCTTCTTAGACTGGCAGCTCGGGAGGCAGGTCGCTTAGTGA
EW715254       <-- GCTCAAGCCTCTTCTTAGACTGGCAGCTCGGGAGGCAGGTCGCTTAGTGA
FD543953       <-- GCTCAAGCCTCTTCTTAGATTGGCAGCTCGGGAGGCAGGTCGCTCAGTGA
FD567952       --> GCTCAAGCCTCTTCTTAGACTGGCAGCTCGGGAGGCAGGTCGCTTAGTGA
EW719249       --> GCTCAAGCCTCTTCTTAGACTGGCAGCTCGGGAGGCAGGTCGCTTAGTGA
FD539668       --> GCTCAAGCCTCTTCT...................................
EV539699       --> GCTC..............................................
EW721569       --> GCTCAAGCCTCTTCTTAGACTGGCAGCTCGGGAGGCAGGTCGCTTAATGA

               601    -    651
UN14170        --> CGGAGGAGAAGCAGAGAGACGGAGAAGAGAAAGAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV534899       <-- CGGAGGAGAAGCAAAGAGACGGAGAAGAG........
FD564474       <-- CGGAGGAGAAGCAGAGAGACGGAGAAGAGAAAGAGCC
EW715254       <-- CGGAGGAGAAGCAGAGAGACGGcc.............
FD543953       <-- CGGAGGAGAAGCAAAGAGACGGAGcc...........
FD567952       --> CGGAGGAGAAGCAGAGAGACGGAGAAGAGAAAGAGCC
EW719249       --> CGGAGGAGAA...........................
FD539668       --> .....................................
EV539699       --> .....................................
EW721569       --> CGGAGGAGAA...........................