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Alignment for radish unigene UN14228

               1      -     51
UN14228        --> CTAGTTCAATTCCATATCTTTTCACCGTCTCTCTCTCTCTTTAGTCTATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570665       <-- ..................................................
EV570664       <-- ..................................................
FD554358       <-- ..................................................
EX901022       <-- ..................................................
EY909953       <-- ..................................................
EX897214       --> CTAGTTCAATTCCATATCTTTTCACCGTCTCTCTCTCTCTTTAGTCTATA
FY431452       --> ..................................................
FY433791       --> ..................................................
FY440977       --> ..................................................
FD558465       --> ..................................................
EV565351       --> ..................................................
EV527352       --> ..................................................
FD981730       --> ..................................................

               51     -    101
UN14228        --> CGCGTTTCAGCGTTAAGTCTTTTCTAGATCTTCTCTACCTTCCTTCACGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570665       <-- ..................................................
EV570664       <-- ..................................................
FD554358       <-- ..................................................
EX901022       <-- ..................................................
EY909953       <-- ..................................................
EX897214       --> CGCGTTTCAGCGTTAAGTCTTTTCTAGATCTTCTCTACCTTCCTTCACGC
FY431452       --> CGCGTTTCAGCGTTAAGTCTTTTCTAGATCTTCTCTACCTTCCTTCACGC
FY433791       --> .......................CTAGATCTTCTCTACCTTCCTTCACGC
FY440977       --> ......................................CTTCCTTCACGC
FD558465       --> ..................................................
EV565351       --> ..................................................
EV527352       --> ..................................................
FD981730       --> ..................................................

               101    -    151
UN14228        --> CGTTATAACAAAAAAAACTCTCTGATCAGTCAATAGAATCCATCGGAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570665       <-- ..................................................
EV570664       <-- ..................................................
FD554358       <-- ..................................................
EX901022       <-- ..................................................
EY909953       <-- ..................................................
EX897214       --> CGTTATAACAAAAAAAACTCTCTGATCAGTCAATAGAATCCATCGGAACA
FY431452       --> CGTTATAACAAAAAAAACTCTCTGATCAGTCAATAGAATCCATCGGAACA
FY433791       --> CGTTATAACAAAAAAAACTCTCTGATCAGTCAATAGAATCCATCGGAACA
FY440977       --> CGTTATAACAAAAAAAACTCTCTGATCAGTCAATAGAATCCATCGGAACA
FD558465       --> .....ggaataacAAAACTCTCTGATCAGTCAATAAAATCCATCGGAACA
EV565351       --> ..................................................
EV527352       --> ..................................................
FD981730       --> ..................................................

               151    -    201
UN14228        --> GCGTTGTTGTTTTTTTGTTCCCAGTAGAGAGAGAGAGAGAGAGAGAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570665       <-- ..................................................
EV570664       <-- ..................................................
FD554358       <-- ..................................................
EX901022       <-- ..................................................
EY909953       <-- ..................................................
EX897214       --> GCGTTGTTGTTTTTTTGTTCCCAGTAGAGAGAGAGAGAGAGAGAGAGAGA
FY431452       --> GCGTTGTTGTTTTTTTGTTCCCAGTAGAGAGAGAGAGAGAGAGAGAGAGA
FY433791       --> GCGTTGTTGTTTTTTTGTTCCCAGTAGAGAGAGAGAGAGAGAGAGAGAGA
FY440977       --> GCGTTGTTGTTTTTTTGTTCCCAGTAGAGAGAGAGAGAGAGAGAGAGAGA
FD558465       --> GCGTTGTTGTTTTTTTGTTCCCAGTAG---TAGAGAGAGAGAGAGAGAGA
EV565351       --> ................GTTCCCAGTAG-TAGAGAGAGAGAGAGAGAGAGA
EV527352       --> ..................................................
FD981730       --> ..................................................

               201    -    251
UN14228        --> --ACACAAAAAAAAAAGAAGATGGCGCAACAGCAACAATCGTTGATCTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570665       <-- ................aggGATGGCGCAACAGCAACAATCTTTGATCTAC  Raphanus raphanistrum subsp. landra
EV570664       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD554358       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX901022       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY909953       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897214       --> GAACACAAAAAAAAAAGAAGATGGCGCAACAGCAACAATCGTTGATCTAC  Raphanus sativus cv Early Scarlet Globe
FY431452       --> --ACACAAAAAAAAAAGAAGATGGCGCAACAGCAACAATCGTTGATCTAC  Raphanus sativus cv GSK3-1
FY433791       --> --ACACAAAAAAAAAAGAAGATGGCGCAACAGCAACAATCGTTGATCTAC  Raphanus sativus cv GSK3-1
FY440977       --> --ACACAAAAAAAAAAGAAGATGGCGCAACAGCAACAATCGTTGATCTAC  Raphanus sativus cv GSK3-1
FD558465       --> --ACACAGGAAAAAAAG-GGATGGCGCAACAGCAACAATCTTTGATCTAC  Raphanus raphanistrum subsp. landra
EV565351       --> --ACACAGGAAAAAAAG-GGATGGCGCAACAGCAACAATCTTTGATCTAC  Raphanus raphanistrum subsp. landra
EV527352       --> ...............................GCAACAATCGTTGATCTAC  Raphanus raphanistrum subsp. maritimus
FD981730       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               251    -    301
UN14228        --> AGTTTCGTGGCTAGAGGGACGGTGATCCTGGTGGAGTTCACCGATTTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570665       <-- AGTTTCGTGGCTCGAGGGACGGTGATCCTGGTGGAGTTCACCGATTTCAA  Raphanus raphanistrum subsp. landra
EV570664       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD554358       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX901022       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY909953       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897214       --> AGTTTCGTGGCTAGAGGGACGGTGATCCTGGTGGAGTTCACCGACTTCAA  Raphanus sativus cv Early Scarlet Globe
FY431452       --> AGTTTCGTGGCTAGAGGGACGGTGATCCTGGTGGAGTTCACCGACTTCAA  Raphanus sativus cv GSK3-1
FY433791       --> AGTTTCGTGGCTAGAGGGACGGTGATCCTGGTGGAGTTCACCGACTTCAA  Raphanus sativus cv GSK3-1
FY440977       --> AGTTTCGTGGCTAGAGGGACGGTGATCCTGGTGGAGTTCACCGACTTCAA  Raphanus sativus cv GSK3-1
FD558465       --> AGTTTCGTGGCTCGAGGGACGGTGATCCTGGTGGAGTTCACCGATTTCAA  Raphanus raphanistrum subsp. landra
EV565351       --> AGTTTCGTGGCTCGAGGGACGGTGATCCTGGTGGAGTTCACCGATTTCAA  Raphanus raphanistrum subsp. landra
EV527352       --> AGTTTCGTGGCACGAGGGACGGTGATCCTGGTGGAGTTCACGGATTTCAA  Raphanus raphanistrum subsp. maritimus
FD981730       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               301    -    351
UN14228        --> GGGAAATTTCACATCGATCGCTGCACAGTGCCTCCAAAAGCTTCCTTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570665       <-- GGGAAATTTCACATCGATCGCTGCACAGTGCCTCCAAAAGCTTCCTTCTT
EV570664       <-- ................................................TT
FD554358       <-- ................................................TT
EX901022       <-- ..................................................
EY909953       <-- ..................................................
EX897214       --> GGGAAATTTCACATCGATCGCTGCACAGTGCCTCCAAAAGCTTCCTTCTT
FY431452       --> GGGAAATTTCACATCGATCGCTGCACAGTGCCTCCAAAAGCTTCCTTCTT
FY433791       --> GGGAAATTTCACATCGATCGCTGCACAGTGCCTCCAAAAGCTTCCTTCTT
FY440977       --> GGGAAATTTCACATCGATCGCTGCACAGTGCCTCCAAAAGCTTCCTTCTT
FD558465       --> GGGAAATTTCACATCGATCGCTGCACAGTGCCTCCAAAAGCTTCCTTCTT
EV565351       --> GGGAAATTTCACATCGATCGCTGCACAGTGCCTCCAAAAGCTTCCTTCTT
EV527352       --> GGGAAATTTCACATCGATCGCTGCACAGTGCCTCCAAAAGCTTCCTTCTT
FD981730       --> .......................................GCTTCCTTCTT

               351    -    401
UN14228        --> CCAACAACAAGTTCACCTACAACTGCGATGGTCATACCTTCAATTACTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570665       <-- CCAACAACAAGTTCACCTACAACTGCGATGGTCATACCTTCAATTACTTG
EV570664       <-- CCAACAACAAGTTCACCTACAACTGCGATGGTCATACCTTCAATTACTTG
FD554358       <-- CCAACAACAAGTTCACCTACAACTGCGATGGTCATACCTTCAATTACTTG
EX901022       <-- ..................................................
EY909953       <-- ..................................................
EX897214       --> CCAACAACAAGTTCACCTACAACTGCGATGGTCATACCTTCAATTACTTG
FY431452       --> CCAACAACAAGTTCACCTACAACTGCGATGGTCATACCTTCAATTACTTG
FY433791       --> CCAACAACAAGTTCACCTACAACTGCGATGGTCATACCTTCAATTACTTG
FY440977       --> CCAACAACAAGTTCACCTACAACTGCGATGGTCATACCTTCAATTACTTG
FD558465       --> CCAACAACAAGTTCACCTACAACTGCGATGGTCATACCTTCAATTACTTG
EV565351       --> CCAACAACAAGTTCACCTACAACTGCGATGGTCATACCTTCAATTACTTG
EV527352       --> CCAACAACAAGTTCACCTACAACTGCGATGGTCATACCTTCAATTACCTA
FD981730       --> CCAACAACGAGTTCACCTACAACTGCGATGGTCATACCTTCAATTACTTA

               401    -    451
UN14228        --> GTTGAAAATGGATTCACTTATTGTGTGGTTGCAGTTGATTCTGCTGGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570665       <-- GTTGAAAATGGATTCACTTATTGTGTGGTTGCAGTTGATTCTGCTGGGAG
EV570664       <-- GTTGAAAATGGATTCACTTATTGTGTGGTTGCAGTTGATTCTGCTGGGAG
FD554358       <-- GTTGAAAATGGATTCACTTATTGTGTGGTTGCAGTTGATTCTGCTGGGAG
EX901022       <-- ................................................AG
EY909953       <-- ..................................................
EX897214       --> GTTGAAAATGGATTCACTTATTGTGTGGTTGCAGTTGATTCTGCTGGGAG
FY431452       --> GTTGAAAATGGATTCACTTATTGTGTGGTTGCAGTTGATTCTGCTGGGAG
FY433791       --> GTTGAAAATGGATTCACTTATTGTGTGGTTGCAGTTGATTCTGCTGGGAG
FY440977       --> GTTGAAAATGGATTCACTTATTGTGTGGTTGCAGTTGATTCTGCTGGGAG
FD558465       --> GTTGAAAATGGATTCACTTATTGTGTGGTTGCAGTTGATTCTGCTGGGAG
EV565351       --> GTTGAAAATGGATTCACTTATTGTGTGGTTGCAGTTGATTCTGCTGGGAG
EV527352       --> GTTGAAAATGGATTCACATATTGTGTTGTTGCAGTTGATTCTGCTGGGAG
FD981730       --> GTTGAAAATGGATTCACTTATTGTGTGGTTGCAGTTGATTCTGCTGGGAG

               451    -    501
UN14228        --> GCAGATTCCTATGGCTTTCTTGGAGCGAGTTAAGGAGGATTTCAACAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570665       <-- GCAGATTCCTATGGCTTTCTTGGAGCGAGTTAAGGAGGATTTCAACAAGA
EV570664       <-- GCAGATTCCTATGGCTTTCTTGGAGCGAGTTAAGGAGGATTTCAACAAGA
FD554358       <-- GCAGATTCCTATGGCTTTCTTGGAGCGAGTTAAGGAGGATTTCAACAAGA
EX901022       <-- GCAGATTCCTATGGCTTTCTTGGAGCGAGTTAAGGAGGATTTCAACAAGA
EY909953       <-- ..................................................
EX897214       --> GCAGATTCCTATGGCTTTCTTGGAGCGAGTTAAGGAGGATTTCAACAAGA
FY431452       --> GCAGATTCCTATGGCTTTCTTGGAGCGAGTTAAGGAGGATTTCAACAAGA
FY433791       --> GCAGATTCCTATGGCTTTCTTGGAGCGAGTTAAGGAGGATTTCAACAAGA
FY440977       --> GCAGATTCCTATGGCTTTCTTGGAGCGAGTTAAGGAGGATTTCAACAAGA
FD558465       --> GCAGATTCCTATGGCTTTCTTGGAGCGAGTTAAGGAGGATTTCAACAAGA
EV565351       --> GCAGATTCCTATGGCTTTCTTGGAGCGAGTTAAGGAGGATTTCAACAAGA
EV527352       --> GCAGATTCCTATGGCTTTCTTGGAGCGAGTTAAGGAGGATTTCAACAAGA
FD981730       --> GCAGATTCCTATGGCTTTCTTGGAGCGAGTTAAGGAGGATTTCAACAAGA

               501    -    551
UN14228        --> GATATGGTGGTGGCAAGGCTGCTACTGCTCAACCCAACTCCTTGAATAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570665       <-- GATATGGTGGTGGCAAGGCTGCTACTGCTCAACCCAACTCCTTGAATAAG
EV570664       <-- GATATGGTGGTGGCAAGGCTGCTACTGCTCAACCCAACTCCTTGAATAAG
FD554358       <-- GATATGGTGGTGGCAAGGCTGCTACTGCTCAACCCAACTCCTTGAATAAG
EX901022       <-- GATATGGTGGTGGCAAGGCTGCTACTGCTCAACCCAACTCCTTGAATAAG
EY909953       <-- ..................................................
EX897214       --> GATATGGTGGTGGCAAGGCTGCTACTGCTCAACCCAACTCCTTGAATAAG
FY431452       --> GATATGGTGGTGGCAAGGCTGCTACTGCTCAACCCAACTCCTTGAATAAG
FY433791       --> GATATGGTGGTGGCAAGGCTGCTACTGCTCAACCCAACTCCTTGAATAAG
FY440977       --> GATATGGTGGTGGCAAGGCTGCTACTGCTCAACCCAACTCCTTGAATAAG
FD558465       --> GATATGGTGGTGGCAAGGCTGCTACTGCTCAACCCAACTCCTTGAATAAG
EV565351       --> GATATGGTGGTGGCAAGGCTGCTACTGCTCAACCCAACTCCTTGAATAAG
EV527352       --> GATATGGTGGTGGCAAGGCTGCTACTGCTCAACCCAACTCCTTGAATAAG
FD981730       --> GATATGGTGGTGGCAAGGCTGCTACTGCTCAACCCAACTCCTTGAATAAG

               551    -    601
UN14228        --> GAATTTGGGTCGAAACTGAAAGAGCACATGCAGTATTGTATGGATCATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570665       <-- GAATTTGGGTCGAAACTGAAAGAGCACATGCAGTATTGTATGGATCATCC
EV570664       <-- GAATTTGGGTCGAAACTGAAAGAGCACATGCAGTATTGTATGGATCATCC
FD554358       <-- GAATTTGGGTCGAAACTGAAAGAGCACATGCAGTATTGTATGGATCATCC
EX901022       <-- GAATTTGGGTCGAAACTGAAAGAGCACATGCAGTATTGTATGGATCATCC
EY909953       <-- ..ATTTGGGTCGAAACTGAAAGAGCACATGCAGTATTGTATGGATCATCC
EX897214       --> GAATTTGGGTCGAAACTGAAAGAGCACATGCAGTATTGTATGGATCATCC
FY431452       --> GAATTTGGGTCGAAACTGAAAGAGCACATGCAGTATTGTATGGATCATCC
FY433791       --> GAATTTGGGTCGAAACTGAAAGAGCACATGCAGTATTGTATGGATCATCC
FY440977       --> GAATTTGGGTCGAAACTGAAAGAGCACATGCAGTATTGTATGGATCATCC
FD558465       --> GAATTTGGGTCGAAACTGAAAGAGCACATGCAGTATTGTATGGATCATCC
EV565351       --> GAATTTGGGTCGAAACTGAAAGAGCACATGCAGTATTGTATGGATCATCC
EV527352       --> GAATTTGGGTCGAAACTGAAAGAGCACATGCAGTATTGTATGGATCATCC
FD981730       --> GAATTTGGGTCGAAACTGAAAGAGCACATGCAGTATTGTATGGATCATCC

               601    -    651
UN14228        --> TGATGAGATTAGCAAGCTTGCTAAGGTTAAAGCTCAAGTTTCTGAAGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570665       <-- TGATGAGATTAGCAAGCTTGCTAAGGTTAAAGCTCAAGTTTCTGAAGTTA
EV570664       <-- TGATGAGATTAGCAAGCTTGCTAAGGTTAAAGCTCAAGTTTCTGAAGTTA
FD554358       <-- TGATGAGATTAGCAAGCTTGCTAAGGTTAAAGCTCAAGTTTCTGAAGTTA
EX901022       <-- TGATGAGATTAGCAAGCTTGCTAAGGTTAAAGCTCAAGTTTTTGAAGTTA
EY909953       <-- TGATGAGATTAGCAAGCTTGCTAAGGTTAAAGCTCAAGTTTCTGAAGTTA
EX897214       --> TGATGAGATTAGCAAGCTTGCTAAG-TTAAAGCTCAAGTTTCT.......
FY431452       --> TGATGAGATTAGCAAGCTTGCTAAGGTTAAAGCTCAAGTTTCTGAAGTTA
FY433791       --> TGATGAGATTAGCAAGCTTGCTAAGGTTAAAGCTCAAGTTTCTGAAGTTA
FY440977       --> TGATGAGATTAGCAAGCTTGCTAAGGTTAAAGCTCAAGTTTCTGAAGTTA
FD558465       --> TGATGAGATTAGCAAGCTTGCTAAGGTTAAAGCTCAAGTTTCTGAAGTTA
EV565351       --> TGATGAGATTAGCAAGCTTGCTAAGGTTAAAGCTCAAGTTTCTGAAGTTA
EV527352       --> TGATGAGATTAGCAAGCTTGCTAAGGTTAAAGCTCAAGTTTCTGAAGTTA
FD981730       --> TGATGAGATTAGCAAGCTTGCTAAGGTTAAAGCTCAAGTTTCTGAAGTTA

               651    -    701
UN14228        --> AAGGTGTCATGATGGAAAACATTGAGAAGGTTCTTGACCGTGGTGAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570665       <-- AAGGTGTCATGATGGAAAACATTGAGAAGGTTCTTGACCGTGGTGAGAAA  Raphanus raphanistrum subsp. landra
EV570664       <-- AAGGTGTCATGATGGAAAACATTGAGAAGGTTCTTGACCGTGGTGAGAAA  Raphanus raphanistrum subsp. landra
FD554358       <-- AAGGTGTCATGATGGAAAACATTGAGAAGGTTCTTGACCGTGGTGAGAAA  Raphanus raphanistrum subsp. landra
EX901022       <-- AAGGTGTCATGATGGAAAACATTGAGAAGGTCCTTGACCGTGGTGAGAAA  Raphanus sativus cv Early Scarlet Globe
EY909953       <-- AAGGTGTCATGATGGAAAACATTGAGAAGGTTCTTGACCGTGGTGAGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897214       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY431452       --> AAGGTGTCATGATGGAAAACATTGAGAAGGTCCTTGACCGTGGTGAGAAA  Raphanus sativus cv GSK3-1
FY433791       --> AAGGTGTCATGATGGAAAACATTGAGAAGGTCCTTGACCGTGGTGAGAAA  Raphanus sativus cv GSK3-1
FY440977       --> AAGGTGTCATGATGGAAAACATTGAGAAGGTCCTTGACCGTGGTGAGAAA  Raphanus sativus cv GSK3-1
FD558465       --> AAGGTGTCATGATGGAAAACATTGAGAAGGTTCTTGACCGTGGTGAGAAA  Raphanus raphanistrum subsp. landra
EV565351       --> AAGGTGTCATGATGGAAAACATTGAGAAGGTTCTTGACCGTGGTGAGAAA  Raphanus raphanistrum subsp. landra
EV527352       --> AAGGTGTCATGATGGAAAACATTGAGAAGGTCCTTGACCGTGGTGAGAAA  Raphanus raphanistrum subsp. maritimus
FD981730       --> AAGGTGTCATGATGGAAAACATTGAGAAGGTTCTTGACCGTGGTGAGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)

               701    -    751
UN14228        --> ATCGAACTTTTGGTGGACAAAACCGAAAACCTTCGCTCACAGGCGCAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570665       <-- ATCGAACTTTTGGTGGACAAAACCGAAAACCTTCGCTCACAGGCGCAAGA
EV570664       <-- ATCGAACTTTTGGTGGACAAAACCGAAAACCTTCGCTCACAGGCGCAAGA
FD554358       <-- ATCGAACTTTTGGTGGACAAAACCGAAAACCTTCGCTCACAGGCGCAAGA
EX901022       <-- ATCGAACTTTTGGTGGACAAAACCGAAAACCTTCGCTCACAGGCGCAAGA
EY909953       <-- ATCGAACTTTTGGTGGACAAAACCGAAAACCTTCGCTCACAGGCGCAAGA
EX897214       --> ..................................................
FY431452       --> ATCGAACTTTTGGTGGACAAAACCGAAAACCTTCGCTCACAGGCGCAAGA
FY433791       --> ATCGAACTTTTGGTGGACAAAACCGAAAACCTTCGCTCACAGGCGCAAGA
FY440977       --> ATCGAACTTTTGGTGGACAAAACCGAAAACCTTCGCTCACAGGCGCAAGA
FD558465       --> ATCGAACTTTTGGTGGACAAAACCGAAAACCTTCGCTCACAGGCGCAAGA
EV565351       --> ATCGAACTTTTGGTGGACAAAACCGAAAACCTTCGCTCACAGGCGCAAGA
EV527352       --> ATCGAACTTTTGGTGGACAAAACCGAAAACCTTCGCTCACAGGCGCAAGA
FD981730       --> ATCGAACTTTTGGTGGACAAAACCGAAAACCTTCGCTCACAGGCGCAAGA

               751    -    801
UN14228        --> TTTCAGAACACAAGGAACTCAAATGAGAAGAAAGATGTGGTTTCAGAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570665       <-- TTTCAGAACACAAGGAACTCAAATGAGAAGAAAGATGTGGTTTCAGAACA  Raphanus raphanistrum subsp. landra
EV570664       <-- TTTCAGAACACAAGGAACTCAAATGAGAAGAAAGATGTGGTTTCAGAACA  Raphanus raphanistrum subsp. landra
FD554358       <-- TTTCAGAACACAAGGAACTCAAATGAGAAGAAAGATGTGGTTTCAGAACA  Raphanus raphanistrum subsp. landra
EX901022       <-- TTTCAGAACACAAGGGACTCAAATGAGAAGAAAGATGTGGTTTCAGAACA  Raphanus sativus cv Early Scarlet Globe
EY909953       <-- TTTCAGAACACAAGGAACTCAAATGAGAAGAAAGATGTGGTTTCAGAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897214       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY431452       --> TTTCAGAACACAAGGGACTCAAATGAGAAGAAAGATGTGGTTTCAGAACA  Raphanus sativus cv GSK3-1
FY433791       --> TTTCAGAACACAAGGGACTCAAATGAGAAGAAAGATGTGGTTTCAGAACA  Raphanus sativus cv GSK3-1
FY440977       --> TTTCAGAACACAAGGGACTCAAATGAGAAGAAAGATGTGGTTTCAGAACA  Raphanus sativus cv GSK3-1
FD558465       --> TTTCAGAcac........................................  Raphanus raphanistrum subsp. landra
EV565351       --> TTTCAGAACACAAGGAACTCAAATGAGAAGAAAGATGTGGTTTCAGAACA  Raphanus raphanistrum subsp. landra
EV527352       --> TTTCAGAACACAAGGGACTCAAATGAGAAGAAAGATGTGGTTTCAGAACA  Raphanus raphanistrum subsp. maritimus
FD981730       --> TTTCAGAACACAAGGAACTCAAATGAGAAGAAAGATGTGGTTTCAGAACA  Raphanus raphanistrum subsp. raphanistrum (NY)

               801    -    851
UN14228        --> TGAAGATAAAACTCATTGTTCTTGCAATCATCATCGCTTTGATCCTCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570665       <-- TGAAGATAAAACTCATTGTTCTTGCAATCATCATCGCTTTGATCCTCATC  Raphanus raphanistrum subsp. landra
EV570664       <-- TGAAGATAAAACTCATTGTTCTTGCAATCATCATCGCTTTGATCCTCATC  Raphanus raphanistrum subsp. landra
FD554358       <-- TGAAGATAAAACTCATTGTTCTTGCAATCATCATCGCTTTGATCCTCATC  Raphanus raphanistrum subsp. landra
EX901022       <-- TGAAGATAAAACTCATTGTTCTTGCAATCATCATCGCCTTGATCCTCATC  Raphanus sativus cv Early Scarlet Globe
EY909953       <-- TGAAGATAAAACTCATTGTTCTTGCAATCATCATCGCTTTGATCCTCATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897214       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY431452       --> TGAAGATAAAACTCATTGTTCTTGGCATCATCATCGCCTTGATCCTCATC  Raphanus sativus cv GSK3-1
FY433791       --> TGAAGATAAAACTCATTGTTCTTGCAATCATCATCGCCTTGATCCTCATC  Raphanus sativus cv GSK3-1
FY440977       --> TGAAGATAAAACTCATTGTTCTTGCAATCATCATCGCCTTGATCCTCATC  Raphanus sativus cv GSK3-1
FD558465       --> ..................................................  Raphanus raphanistrum subsp. landra
EV565351       --> TGAAGATAAAACTCATTGTTCTTGCAATCATCATCGCTTTGATCCTCATC  Raphanus raphanistrum subsp. landra
EV527352       --> TGAAGATAAAACTCATTGTTCTTGCAATCATCATCGCCTTGATCCTCATC  Raphanus raphanistrum subsp. maritimus
FD981730       --> TGAAGATAAAACTCATTGTTCTTGCAATCATCATCGCTTTGATCCTCATC  Raphanus raphanistrum subsp. raphanistrum (NY)

               851    -    901
UN14228        --> ATCGTCCTCTCAGTCTGCGGTGG-CTTCAACTGCGGCAAATAAGTC-CGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570665       <-- ATCGTCCTCTCAGTCTGCGGTGG-CTTCAACTGCGGCAAATAAGTC-CGG
EV570664       <-- ATCGTCCTCTCAGTCTGCGGTGG-CTTCAACTGCGGCAAATAAGTC-CGG
FD554358       <-- ATCGTCCTCTCAGTCTGCGGTGG-CTTCAACTGCGGCAAATAAGTC-CGG
EX901022       <-- ATCGTCCTCTCAGTTTGCGGTGG-CTTCAACTGCGGCAAATAAGTCTTGG
EY909953       <-- ATCGTCCTCTCAGTCTGCGGTGG-CTTCAACTGCGGCAAATAAGTC-CGG
EX897214       --> ..................................................
FY431452       --> ATCGTCCTCTCAGTCT..................................
FY433791       --> ATCGTCCTCTCAGTCTG.................................
FY440977       --> ATCGTCCTCTCAGTCTGCGGTGGGCTTCA-CTGCGGCAAATAAGTCTTGG
FD558465       --> ..................................................
EV565351       --> ATCGTCCTCTCAGTCTGCGGTGG-CTTCAACTGCGGCAAATAAGTC-CGG
EV527352       --> ATCGTCCTCTCAGTCTGCGGTGG-CTTCAACTGCGGCAAATAAGTC-CGG
FD981730       --> ATCGTCCTCTCAGTCTGCGGTGG-CTTCAACTGCGGCAAATAAGTC-CGG

               901    -    951
UN14228        --> AACATCTCTGATTTCCGAGAACATCATCCTCATTCAGTTTGTTGTGCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570665       <-- AACATCTCTGATTTCCGAGAACATCATCCTCATTCAGTTTGTTGTGCTTT
EV570664       <-- AACATCTCTGATTTCCGAGAACATCATCCTCATTCAGTTTGTTGTGCTTT
FD554358       <-- AACATCTCTGATTTCCGAGAACATCATCCTCATTCAGTTTGTTGTGCTTT
EX901022       <-- AACATTTTTGATTTCCGAGAACATCATCCTCATTCAGTTTGTT---GTTT
EY909953       <-- AACATCTCTGATTTCCGAGAACATCATCCTCATTCAGTTTGTTGTGCTTT
EX897214       --> ..................................................
FY431452       --> ..................................................
FY433791       --> ..................................................
FY440977       --> AACATTTCTGATTTCC..................................
FD558465       --> ..................................................
EV565351       --> AACATCTCTGATTTCCGAGAACATCATCCTCATTCAGTTTGTTGTGCTTT
EV527352       --> AACATCTCTGATTTCCGAGAACATCATCCTCATTCAGTTTGTTGTGCTTT
FD981730       --> AACATCTCTGATTTCCGAGAACATCATCCTCATTCAGTTTGTTGTGCTTT

               951    -   1001
UN14228        --> TTTTTTTTCTTTT-TGGTTTAAAATTTCTCATGGCTATGTTTCTCTTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570665       <-- TTTTTTTTCTTTT-TGGTTTAAAATTTCTCATGGCTATGTTTCTCTTGCT
EV570664       <-- TTTTTTTTCTTTT-TGGTTTAAAATTTCTCATGGCTATGTTTCTCTTGCT
FD554358       <-- TTTTTTTTCTTTT-TGGTTTAAAATTTCTCATGGCTATGTTTCTCTTGCT
EX901022       <-- TTTTTTTTCTTTTGTGGTTTAAAATTTCTCATGGCTATGTTTCTCTTGCT
EY909953       <-- TTTTTTTTCCTTT-TGGTTTAAAATTTCTCATGGCTATGTTTCTCTTGCT
EX897214       --> ..................................................
FY431452       --> ..................................................
FY433791       --> ..................................................
FY440977       --> ..................................................
FD558465       --> ..................................................
EV565351       --> TTTTTTTTCT........................................
EV527352       --> TTTTTTTTCTTTT-TGGCTTAAAATTTCTCATCGCTATGTTTCTCTTGCT
FD981730       --> TTTTTTT-CTTTT--GGTTTAAAATTTCTCATGGCTATGTTTCTCTTGCT

               1001   -   1051
UN14228        --> TAGATTTGCACTTGTTGAAATTGGTTTTGTATAGGTCATATATATATATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570665       <-- TAGATTTGCACTTGTTGAAATTGGTTTTGTATAGGTCATATATATATATA
EV570664       <-- TAGATTTGCACTTGTTGAAATTGGTTTTGTATAGGTCATATATATATATA
FD554358       <-- TAGATTTGCACTTGTTGAAATTGGTTTTGTATAGGTCATATATATATATA
EX901022       <-- TAGATTTGCACTTGTTGAAATTGGTTTTGTATAGGTCATATATA----TA
EY909953       <-- TAGATTTGCACTTGTTGAAATTGGTTTTGTATAGGTCATATATATATA--
EX897214       --> ..................................................
FY431452       --> ..................................................
FY433791       --> ..................................................
FY440977       --> ..................................................
FD558465       --> ..................................................
EV565351       --> ..................................................
EV527352       --> TAGATTTGCAC.......................................
FD981730       --> TAGATTTGCAC.......................................

               1051   -   1101
UN14228        --> TGTATGAAACTGATTCTTGCAAACCATTTACTTGGGACCTAATTTGAACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570665       <-- TGTATGAAACTGATTCTTGCAAACCATTTACTTGGGACCTAATTTGAACG
EV570664       <-- TGTATGAAACTGATTCT.................................
FD554358       <-- TGTATGAAACTGATTCTTGCAAACCATTTACTTGGGACCTAATTTGAACG
EX901022       <-- TGTATGAAACTGATTCTTGCAAACCATTTACTT-CGACCTAATTTGAACG
EY909953       <-- TGTATGAAACTGATTCTTGCAAACCATTTACTTGGGACCTAATTTGAACG
EX897214       --> ..................................................
FY431452       --> ..................................................
FY433791       --> ..................................................
FY440977       --> ..................................................
FD558465       --> ..................................................
EV565351       --> ..................................................
EV527352       --> ..................................................
FD981730       --> ..................................................

               1101   -   1151
UN14228        --> CTTGTGTTTGCTTTGGTCTTTTTATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570665       <-- CTTGTGTTTGCTTTGGTCTTTTTATT
EV570664       <-- ..........................
FD554358       <-- CTTGTGTTTGCTTTGGTCT.......
EX901022       <-- CTTGTGTTTGCTTTGGTCTTTTTATT
EY909953       <-- CTTGTGTTTGCTTTGGcc........
EX897214       --> ..........................
FY431452       --> ..........................
FY433791       --> ..........................
FY440977       --> ..........................
FD558465       --> ..........................
EV565351       --> ..........................
EV527352       --> ..........................
FD981730       --> ..........................