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Alignment for radish unigene UN14257

               1      -     51
UN14257        --> GGATTGTTAATAGAATAGGAGAGCTTGTGAGTCACACGTGTAAACTCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762029       <-- ..................................................
FD981180       <-- ..................................................
EY923613       <-- ..................................................
FD938654       <-- ..................................................
FD569481       <-- ..................................................
EV552598       <-- ..................................................
EY938563       <-- ..................................................
EY930012       <-- ..................................................
EY917240       <-- ..................................................
EY898181       <-- ..................................................
FD947813       <-- ..................................................
FY440554       --> GGATTGTTAATAGAAGAGGAAAGCTTGTGAGTCACACGTGTAAACCCTCC
EX768375       --> ........acTAGAATAGGAGAGCTTGTGAGTCACACGTGTAAACTCTCC
FD943687       --> ..................................................
EX766393       --> ..................................................
FD976960       --> ..................................................
EY926312       --> ..................................................
EY934668       --> ..................................................

               51     -    101
UN14257        --> TCTGTTTCTCTTTACTTATGTTCTATGAAACTTTGAATATTGATACCAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762029       <-- ...........................AAACTTTGAATATTGATACCAAT
FD981180       <-- ..................................ggATATTGATACCAAT
EY923613       <-- .........................................GATACCAAT
FD938654       <-- .........................................GATACCAAT
FD569481       <-- ..........................................ATACCAAT
EV552598       <-- ..................................................
EY938563       <-- ..................................................
EY930012       <-- ..................................................
EY917240       <-- ..................................................
EY898181       <-- ..................................................
FD947813       <-- ..................................................
FY440554       --> TCTGTTTCTCTTTACTTATGTTCTATGAAACTTTGAATATTGATACCAAT
EX768375       --> TCTGTTTCTCTTTACTTATGTTCTATGAAACTTTGAATATTGATACCAAT
FD943687       --> ........................ATGAAACTTTGAATATTGGTACCAAT
EX766393       --> ...........................AAACTTTGAATATTGATACCAAT
FD976960       --> ..................................ggATATTGATACCAAT
EY926312       --> ..................................................
EY934668       --> ..................................................

               101    -    151
UN14257        --> TCAAATTCATGAGATTCATGAACACCAAAGTTTAATTGCATATACAAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762029       <-- TCAAATTCATGAGATTCATGAACACCAAAGTTTAATTGCATATACAAAAG
FD981180       <-- TCAAATTCATGAGATTCATGAACACCAAAGTTTAATTGCATATACAAAAG
EY923613       <-- TCAAATTCATGAGATTCATGAACACCAAAGTTTAATTGCATATACAAAAG
FD938654       <-- TCAAATTCATGAGATTCATGAACACCAAAGTTTAAGTGCATATGCAAAAG
FD569481       <-- TCAAATTCATGGGATTCATGAACACCAAAGTTTAAGTGCATATACAAAAG
EV552598       <-- .CAAATTCATGAGATTCATGAACACCAAAGTTTAAGTGCATATACAAAAG
EY938563       <-- ................ttttAACACCAAAGTTTAATTGCATATACAAAAG
EY930012       <-- ..................................................
EY917240       <-- ..................................................
EY898181       <-- ..................................................
FD947813       <-- ..................................................
FY440554       --> TCAAATTCATGAGATTCATGAACACCAAAGTTTAATTGCATATACAAAAG
EX768375       --> TCAAATTCATGAGATTCATGAACACCAAAGTTTAAGTGCATATACAAAAG
FD943687       --> TCAAATTCATGAGATTCATGAACACCAAAGTTTAAGTGCATATACAAAAG
EX766393       --> TCAAATTCATGAGATTCATGAACACCAAAGTTTAATTGCATATACAAAAG
FD976960       --> TCAAATTCATGAGATTCATGAACACCAAAGTTTAATTGCATATACAAAAG
EY926312       --> ...................GAACACCAAAGTTTAATTGCATATACAAAAG
EY934668       --> ....................AACACCAAAGTTTAATTGCATATACAAAAG

               151    -    201
UN14257        --> ACATATAAAGATAGAAGTAAGGACAAACAGAAACAGAGAGGCTTAGAATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762029       <-- ACATATAAAGATAGAAGTAAGGACAAACAGAAACAGAGAGGCTTAGAATT
FD981180       <-- ACATATAAAGATAGAAGTAAGGACAAACAGAAACAGAGAGGCTTAGAATT
EY923613       <-- ACATATAAAGATAGAAGTAAGGACAAACAGAAACAGAGAGGCTTAGAATT
FD938654       <-- ACATATAAAGATAGAGGTAAGGACAAACAGAAACAGAGAGGCTTAGAATT
FD569481       <-- ACATATAAAGATAGAGGTAAGGGCAAACAGAAACAGAGAGGCTTAGAATT
EV552598       <-- ACATATAAAGATAGAGGTAAGGACAAACAGAAACAGAGAGGCTTAGAATT
EY938563       <-- ACATATAAAGATAGAAGTAAGGACAAACAGAAACAGAGAGGCTTAGAATT
EY930012       <-- .......................CAAACAGAAACAGAGAGGCTTAGAATT
EY917240       <-- ..................................................
EY898181       <-- ..................................................
FD947813       <-- ..................................................
FY440554       --> ACATATAAAGATAGAAGTAAGGACAAACAGAAACAGAGAGGCTTAGAATT
EX768375       --> ACATATAAAGATAGAGGTAAGGACAAACAGAAACAGAGAGGCTTAGAATT
FD943687       --> ACATATAAAGATAGAGGTAAGGACAAACAGAAACAGAGAGGCTTAAAATT
EX766393       --> ACATATAAAGATAGAAGTAAGGACAAACAGAAACAGAGAGGCTTAAAATT
FD976960       --> ACATATAAAGATAGAAGTAAGGACAAACAGAAACAGAGAGGCTTAAAATT
EY926312       --> ACATATAAAGATAGAAGTAAGGACAAACAGAAACAGAGAGGCTTAGAATT
EY934668       --> ACATATAAAGATAGAAGTAAGGACAAACAGAAACAGAGAGGCTTAGAATT

               201    -    251
UN14257        --> TATCAATCTCAACGCCATCTCTCAAAACCTCATAAGCATCACGGCTTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762029       <-- TATCAATCTCAACGCCATCTCTCAAAACCTCATAAGCATCACGGCTTCTG
FD981180       <-- TATCAATCTCAACGCCATCTCTCAAAACCTCATAAGCATCACGGCTTCTG
EY923613       <-- TATCAATCTCAACGCCATCTCTCAAAACCTCATAAGCATCACGGCTTCTG
FD938654       <-- TATCAATCTCAACGCCATCTCTCAAAACCTCATAAGCATCACGGCCTCTG
FD569481       <-- TATCAATCTCAACGCCATCTCTCAAAACCTCATAAGCATCACGGCTTCTG
EV552598       <-- TATCAATCTCAACGCCATCTCTCAAAACCTCATAAGCATCACGGCTTCTG
EY938563       <-- TATCAATCTCAACGCCATCTCTCAAAACCTCATAAGCATCACGGCTTCTG
EY930012       <-- TATCAATCTCAACGCCATCTCTCAAAACCTCATAAGCATCACGGCTTCTG
EY917240       <-- ..................................................
EY898181       <-- ..................................................
FD947813       <-- ..................................................
FY440554       --> TATCAATCTCAACGCCATCTCTCAAAACCTCATAAGCATCACGGCTTCTG
EX768375       --> TATCAATCTCAACGCCATCTCTCAAAACCTCACAAGCATCACGGCTTCTG
FD943687       --> TATCAATCTCAACGCCATCTCTCAAAACCTCATAAGCATCACGGCTTCTG
EX766393       --> TATCAATCTCAACGCCATCTCTCAAAACCTCATAAGCATCACGGCTTCTG
FD976960       --> TATCAATCTCAACGCCATCTCTCAAAACCTCATAAGCATCACGGCTTCTG
EY926312       --> TATCAATCTCAACGCCATCTCTCAAAACCTCATAAGCATCACGGCTTCTG
EY934668       --> TATCAATCTCAACGCCATCTCTCAAAACCTCATAAGCATCACGGCTTCTG

               251    -    301
UN14257        --> CTTTTCTTCATCCCTGCAGTGAAATGCACCTTGGAAGAGTCAGCAGAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762029       <-- CTTTTCTTCATCCCTGCAGTGAAATGCACCTTGGAAGAGTCAGCAGAGAC
FD981180       <-- CTTTTCTTCATCCCTGCAGTGAAATGCACCTTGGAAGAGTCAGCAGAGAC
EY923613       <-- CTTTTCTTCATCCCTGCAGTGAAATGCACCTTGGAAGAGTCAGCAGAGAC
FD938654       <-- CTTTTCTTCATCCCTGCAGTGAAATGCACCTTGGAAGAGTCAGCAGAGAC
FD569481       <-- CTTTTCTTCATCCCTGCAGTGAAATGCACCTTGGAAGAGTCAGCAGAGAC
EV552598       <-- CTTTTCTTCATCCCTGCAGTGAAATGCACCTTGGAGGAGTCAGCAGAGAC
EY938563       <-- CTTTTCTTCATCCCTGCAGTGAAATGCACCTTCGAAGAGTCAGCAGAGAC
EY930012       <-- CTTTTCTTCATCCCTGCAGTGAAATGCACCTTGGAAGAGTCAGCAGAGAC
EY917240       <-- .................AGTGAAATGCACCTTGGAAGAGTCAGCAGAGAC
EY898181       <-- ........................TGCACCTTGGAAGAGTCAGCAGAGAC
FD947813       <-- ...................................AGAGTCAGCAGAGAC
FY440554       --> CTTTTCTTCATCCCTGCAGTGAAATGCACCTTGGAAGAGTCAGCAGAGAC
EX768375       --> CTTTTCTTCATCCCTGCAGTGGAATGCACCTTGGAAGAGTCAGCAGAGAC
FD943687       --> CTTTTCTTCATCCCTGCAGTGAAATGCACCTTGGAAGAGTCAGCAAAAAC
EX766393       --> CTTTTCTTCATCCCTGCAGTGAAATGCACCTTGGAAGAGTCAGCAAAAAC
FD976960       --> CTTTTCTTCATCCCTGCAGTGAAATGCACCTTGGAAGAGTCAGCAGAAAC
EY926312       --> CTTTTCTTCATCCCTGCAGTGAAATGCACCTTGGAAGAGTCAGCAGAAAC
EY934668       --> CTTTTCTTCATCCCTGCAGTGAAATGCACCTTCGAAGAGTCAGCAGAGAC

               301    -    351
UN14257        --> GCTCGTGACCTTCACCCAAATCATTACTTTTGTTTTCATCCCTTCGACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762029       <-- GCTCGTGACCTTCCCCCAAATCATTACTTTTGTTTTCATCCCTTCGACAT
FD981180       <-- GCTCGTGACTTTCACCCAAATCATTACTTTTGTTTTTATCCCTTCGACAT
EY923613       <-- GCTCGTGACCTTCACCCAAATCATTACTTTTGTTTTCATCCCTTCGACAT
FD938654       <-- GCTCGTGACCTTCACCCAAATCATTACTTTTGTTTTCATCCCTTCGACAT
FD569481       <-- GCTCGTGACCTTCACCCAAATCATTACTTTTGTTTTCATCCCTTCGACAT
EV552598       <-- GCTCGTGACCTTCACCCAAATCATTACTTTTGTTTTCATCCCTTCGACAT
EY938563       <-- GCTCGTGACTTTCACCCAAATCATTACTTTTGTTTTCATCCCTTCGACAT
EY930012       <-- GCTCGTGACCTTCACCCAAATCATTACTTTTGTTTTCATCCCTTCGACAT
EY917240       <-- GCTCGTGACTTTCACCCAAATCATTACTTTTGTTTTCATCCCTTCGACAT
EY898181       <-- GCTCGTGACCTTCACCCAAATCATTACTTTTGTTTTCATCCCTTCGACAT
FD947813       <-- GCTCGTGACCTTCACCCAAATCATTACTTTTGTTTTCATCCCTTCGACAT
FY440554       --> GCTCGTGACTTTCACCCAAATCATTACTTTTGTTTTCATCCCTTCGACAT
EX768375       --> GCTCGTGACCTTCACCCAAATCATTACTTTTGTTTTCATCCCTTCGACAT
FD943687       --> GCTCGTGACCTTCACCCAAATCATTACTTTTGTTTTCATCCCTTCGACAT
EX766393       --> GCTCGTGACCTTCACCCAAATCATTACTTTTGTTTTCATCCCTTCGACAT
FD976960       --> GCTCGTGACTTTCACCCAAATCATTACTTTTGTTTTTATCCCTTCGACAT
EY926312       --> GCTCGTGACCTTCACCCAAATCATTACTTTTGTTTTCATCCCTTCGACAT
EY934668       --> GCTCGTGACTTTCACCCAAATCATTACTTTTGTTTTCATCCCTTCGACAT

               351    -    401
UN14257        --> CGGCTAGCTTCCCTTTCTCCAAGAACCCCGTGACCGTCGTGGTGAACCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762029       <-- CGGCTAGCTTCCCTTTCTCCAAGAACCCC.....................
FD981180       <-- CGGCTAGCTTCCCTTTCTCCAAGAACCCCGTGACCGTCGTGATGAACCTC
EY923613       <-- CGGCTAGCTTCCCTTTCTCCAAGAACCCCGTGACCGTCGTGGTAAACCTC
FD938654       <-- CGGCTAGCTTCCCTTTCTCCAGAAACCCCGTGACCGTCGTGGTGAACCTC
FD569481       <-- CGGCTAGCTTCCCTTTCTCCAGAAACCCCGTGACCGTCGTGGTGAACCTC
EV552598       <-- CGGCTAGCTTCCCTTTCTCCAGAAACCCCGTGACCGTCGTGGTGAACCTC
EY938563       <-- CGGCTAGCTTCCCTTTCTCCAAGAACCCCGTGACCGTCGTGGTGAACCTC
EY930012       <-- CGGCTAGCTTCCCTTTCTCCAAGAACCCCGTGACCGTCGTGGTGAACCTC
EY917240       <-- CGGCTAGCTTCCCTTTCTCCAAGAACCCCGTGACCGTCGTGGTGAACCTC
EY898181       <-- CGGCTAGCTTCCCTTTCTCCAAGAACCCCGTGACCGTCGTGGTGAACCTC
FD947813       <-- CGGCTAGCTTCC-TTTCTCCAGAAACCCCGTGACCGTCGTGGTGAACCTC
FY440554       --> CGGCTAGCTTCCCTTTCTCCAAGAACCCCGTGACCGTCGTGGTGAACCTC
EX768375       --> CGGCTAGCTTCCCTTTCTCCAGAAACCCCGTGACCGTCGTGGTGAACCTC
FD943687       --> CGGCTAGCTTCC-TTTCTCCAGAAACCCCGTGACCGTCGTGGTGAACCTC
EX766393       --> CGGCTAGCTTCCCTTTCTCCAAGAACCCC.....................
FD976960       --> CGGCTAGCTTCCCTTTCTCCAAGAACCCCGTGACCGTCGTGATGAACCTC
EY926312       --> CGGCTAGCTTCCCTTTCTCCAAGAACCCCGTGACCGTCGTGGTGAACCTC
EY934668       --> CGGCTAGCTTCCCTTTCTCCAAGAACCCCGTGACCGTCGTGGTGAACCTC

               401    -    451
UN14257        --> AAGACCGACGAGTCTTTGTAGCCGACCTCGCAGACCGTTGGGATAAAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762029       <-- ..................................................
FD981180       <-- AAGACCGACGAGTCTTTGTAGCCGACTTCGCAGACCGTTGGGATGAAGAC
EY923613       <-- AAGACCGACGAGTCTTTGTAGCCGACCTCGCAGACCGTTGGGATAAAGAC
FD938654       <-- AAGACCGACGAGTCTTTGTAGCCGACCTCGCAGACCGTTGGGATAAAGAC
FD569481       <-- AAGACCGACGAGTCTTTGTAGCCGACCTCGCAGACCGTTGGGATAAAGAC
EV552598       <-- AAGACCGACGAGTCTTTGTAGCCGACCTCGCAGACCGTTGGGATAAAGAC
EY938563       <-- AAGACCGACGAGTCTTTGTAGCCGACTTCGCAGACCGTTGGGATAAAGAC
EY930012       <-- AAGACCGACGAGTCTTTGTAGCCGACCTCGCAGACCGTTGGGATGAAGAC
EY917240       <-- AAGACCGACGAGTCTTTGTAGCCGACTTCGCAGACCGTTGGGATGAAGAC
EY898181       <-- AAGACCGACGAGTCTTTGTAGCCGACCTCGCAGACCGTTGGGATGAAGAC
FD947813       <-- AAGACCGACGAGTCTTTGTAGCCGACCTCGCAGACCGTTGGGATAAAGAC
FY440554       --> AAGACCGACGAGTCTTTGTAGCCGACTTCGCAGACCGTTGGGATGAAGAC
EX768375       --> AAGACCGACGAGTCTTTGTAGCCGACCTCGCAGACCGTTGGGATAAAGAC
FD943687       --> AAGACCGACGAGTCTTTGTAGCCGACCTCGCAGACCGTTGGGATAAAGAC
EX766393       --> ..................................................
FD976960       --> AAGACCGACGAGTCTTTGTAGCCGACTTCGCAGACCGTTGGGATGAAGAC
EY926312       --> AAGACCGACGAGTCTTTGTAGCCGACCTCGCAGACCGTTGGGATGAAGAC
EY934668       --> AAGACCGACGAGTCTTTGTAGCCGACTTCGCAGACCGTTGGGATAAAGAC

               451    -    501
UN14257        --> GGTGAGTTTCCTCGTCTGCTCGTTGAACTCGTAGTTGGTTGCGTCGCGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762029       <-- ..................................................
FD981180       <-- GGTGAGTTTCCTCGTCTGCTCGTTGAACTCGTAGTTGGTTGCGTCGCGTG
EY923613       <-- GGTGAGTTTCCTCGTCTGCTCGTTGAACTCGTAGTTGGTTGCGTCGCGTG
FD938654       <-- GGTGcc............................................
FD569481       <-- GGTGAGTTTCCTCGTCTGCTCGTTGAACTCGTAGTTGGTTGCGTCGCGTG
EV552598       <-- GGTGAGTTTCCTCGTCTGCTCGTTGAACTCGTAGTTGGTTGCGTCGCGTG
EY938563       <-- GGTGAGTTTCCTCGTCTGCTCGTTGAACTCGTAGTTGGTTGCGTCGCGTG
EY930012       <-- GGTGAGTTTCCTCGTCTGCTCGTTGAACTCGTAGTTGGTTGCGTCGCGTG
EY917240       <-- GGTGAGTTTCCTCGTCTGCTCGTTGAACTCGTAGTTGGTTGCGTCGCGTG
EY898181       <-- GGTGAGTTTCCTCGTCTGCTCGTTGAACTCGTAGTTGGTTGCGTCGCGTG
FD947813       <-- GGTGAGTTTCCTCGTCTGCTCGTTGAACTCGTAGTTGGTTGCGTCGCGTG
FY440554       --> GGTGAGTTTCCTCGTCTGCTCGTTGAACTCGTAGTTGGTTGCGTCGCGTG
EX768375       --> GGTGAGTTTCCTCGTCTGCTCGTTGAACTCGTAGTTGGTTGCGTCGCGTG
FD943687       --> GGTGAGTTTCCTCGTCTGCTCGTTGAACTCGTAGTTGGTTGCGTCGCGTG
EX766393       --> ..................................................
FD976960       --> GGGGAGTTTCCTCGTCTGCTCGTTGAACTCGTAGTTGGTTGCGTCGCGTG
EY926312       --> GGTGAGTTTCCTCGTCTGCTCGTTGAACTCGTAGTTGGTTGCGTCGCGTG
EY934668       --> GGTGAGTTTCCTCGTCTGCTCGTTGAACTCGTAGTTGGTTGCGTCGCGTG

               501    -    551
UN14257        --> GAAAGATCCCAACGGGTAAACCGAACTCCTTTAGTAACTCGGGTAATGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762029       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981180       <-- GAAAGATCCCAACAGGTAAACCGAACTCCTTTAGTAACTCGGGTAATGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923613       <-- GAAAGATCCCAACAGGTAAACCGAACTCCTTTAGTAACTCCGGTAATGGC  Raphanus raphanistrum subsp. landra
FD938654       <-- ..................................................  Raphanus sativus var. oleiformis
FD569481       <-- GAAAGATCCCAACGGGTAAACCGAAATCCTTTAGTAACTCGGGTAATGGC  Raphanus sativus cv Early Scarlet Globe
EV552598       <-- GAAAGATCCCAACGGGTAAACCGAACTCCTTTAGTAACTCGGGTAATGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938563       <-- GAAAGATCCCAACGGGTAAACCGAACTCCTTTAGTAACTCGGGTAATGGC  Raphanus sativus cv Early Scarlet Globe
EY930012       <-- GAAAGATCCCAACGGGTAAACCGAACTCCTTTAGTAACTCCGGTAATGGC  Raphanus sativus var. oleiformis
EY917240       <-- GAAAGATCCCAATAGGTAAACCGAACTCCTTTAGTAACTCGGGTAATGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY898181       <-- GAAAGATCCCAACGGGTAAACCGAACTCCTTTAGTAACTCCGGTAATGGC  Raphanus raphanistrum subsp. maritimus
FD947813       <-- GAAAGATCCCAACGGGTAAACCGAACTCCTTTAGTAACTCGGGTAATGGC  Raphanus sativus cv Early Scarlet Globe
FY440554       --> GAAAGATCCCAATAGGTAAACCGAACTCCTTTAGTAACTCGGGTAATGGC  Raphanus sativus cv GSK3-1
EX768375       --> GAAAGATCCCAACGGGTAAACCGAACTCCTTTAGTAACTCGGGTAATGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD943687       --> GAAAGATCCCAACGGGTAAACCGAACTCCTTTAGTAACTCGGGTAATGGC  Raphanus sativus cv Early Scarlet Globe
EX766393       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976960       --> GAAAGATCCCAACAGGTAAACCGAACTCCTTTAGTAACTCGGGTAATGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY926312       --> GAAAGATCCCAACGGGTAAACCGAACTCCTTTAGTAACTCCGGTAATGGC  Raphanus sativus var. oleiformis
EY934668       --> GAAAGATCCCAACGGGTAAACCGAACTCCTTTAGTAACTCGGGTAATGGC  Raphanus sativus cv Early Scarlet Globe

               551    -    601
UN14257        --> TTCTGCATTTTCCCTTTGATTTTGTTCACTAGCCATTTTGTTCCACCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762029       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981180       <-- TTCTGCATTTTCCCTTTGATTTTGTTCACTAGCCATTTTGTTCCTCCTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923613       <-- TTCTGCATTTTCCCTTTGATTTTGTTCACTAGCCACTTTGTTCCACCTTC  Raphanus raphanistrum subsp. landra
FD938654       <-- ..................................................  Raphanus sativus var. oleiformis
FD569481       <-- TTCTGCATTTTCCCTTTGATTTTGTTAACTAGCCATTTTGTTCCACCTTC  Raphanus sativus cv Early Scarlet Globe
EV552598       <-- TTCTGCATTTTCCCTTTGATTTTGTTAACTAGCCATTTTGTTCCACCTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938563       <-- TTCTGCATTTTCTCTTTGATTTTGTTAACTAGCCATTTTGTTCCACCTTC  Raphanus sativus cv Early Scarlet Globe
EY930012       <-- TTCTGCATTTTCCCTTTGATTTTGTTCACTAGCCATTTTGCTCCACCTTC  Raphanus sativus var. oleiformis
EY917240       <-- TTCTGCATTTTCCCTTTGATTTTGTTCACTAGCCATTTTGTTCCTCCTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY898181       <-- TTCTGCATTTTCCCTTTGATTTTGTTCACTAGCCATTTTGTTCCACCTTC  Raphanus raphanistrum subsp. maritimus
FD947813       <-- TTCTGCATTTTCCCTTTGATTTTGTTAACTAGCCATTTTGTTCCACCTTC  Raphanus sativus cv Early Scarlet Globe
FY440554       --> TTCTGCATTTTCC.....................................  Raphanus sativus cv GSK3-1
EX768375       --> TTCTGCATTTTCCCTTTGATTTTGTTAACTAGCCATTTTGTTCCACCTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD943687       --> TTCTGCATTTTCCCTTTGATTTTGTTAACTAGCCATTTTGT.........  Raphanus sativus cv Early Scarlet Globe
EX766393       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976960       --> TTCTGCATTTTCCCTTTGATTTTGTTCACTAGCCATTTTGTTCCTCCTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY926312       --> TTCTGCATTTTCCCTTTGATTTTGTTCACTAGCCATTTTGCTCCACCTTC  Raphanus sativus var. oleiformis
EY934668       --> TTCTGCATTTTCTCTTTGATTTTGTTAACTAGCCATTTTGTTCCACCTTC  Raphanus sativus cv Early Scarlet Globe

               601    -    651
UN14257        --> GATGCTCGTAGACAGAGAGTTGATATCGTCACCGACGGAATCGAGCTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762029       <-- ..................................................
FD981180       <-- GATGCTCGTAGACAGAGAGTTGATGTCGTCACCGACGGAATCGAGCTGCT
EY923613       <-- GATGCTCGTAGACAGAGAGTTGATATCGTCACCGACGGAATCGAGCTGCT
FD938654       <-- ..................................................
FD569481       <-- GATGCTCGTAGACAGAGAGTTGATATCGTCACCGACGGAATCGAGCTGCT
EV552598       <-- GATGCTCGTAGACAGAGAGTTGATATCGTCACCGACGGAATCGAGCTGCT
EY938563       <-- GATGCTCGTAGACAGAGAGTTGATATCGTCACCGACGGAATCGAGCTGCT
EY930012       <-- GATGCTCGTAGACAGAGAGTTGATATCGTCACCGACGGAATCGAGCTGCT
EY917240       <-- GATGCTCGTAGACAGAGAGTTGATGTCGTCACCGACGGAATCGAGCTGCT
EY898181       <-- GATGCTCGTAGACAGAGAGTTGATATCGTCACCGACGGAATCGAGCTGCT
FD947813       <-- GATGCTCGTAGACAGAGAGTTGATATCGTCACCGACGGAATCGAGCTGCT
FY440554       --> ..................................................
EX768375       --> GATGCTAGTAGACAGAGAGTTGATATCGTCACCGACGGAATCGAGCTGCT
FD943687       --> ..................................................
EX766393       --> ..................................................
FD976960       --> GATGCTCGTAGA......................................
EY926312       --> GATGCTCGTAGACAGAGAGTTGATATCGTCACCGACGGAATCGAGCTGCT
EY934668       --> GATGCTCGTAGACAGAGAGTTGATATCGTCACCGACGGAATCGAGCTGCT

               651    -    701
UN14257        --> TGTTCGCCTTCTTCCCTAGCCAGTACGATCCCACCTTGTTCAAGATCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762029       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981180       <-- TGTTCGCCTTCTTCCCTAGCCAGTACGATCCCACCTTGTTCAAGATCTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923613       <-- TGTTTGCCTTCTTCCCTAGCCAGTACGACCCCAACTTGTTCAAGATCTGA  Raphanus raphanistrum subsp. landra
FD938654       <-- ..................................................  Raphanus sativus var. oleiformis
FD569481       <-- TGTTCGCCTTCTTCCCTAGCCAGTAAGATCCCACCTTGTTCAAGATCTGA  Raphanus sativus cv Early Scarlet Globe
EV552598       <-- TGTTCGCCTTCTTCCCTAGCCAGTAAGATCCCACCTTGTTCAAGATCTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938563       <-- TGTTCGCCTTCTTCCCTAGCCAGTAAGATCCCACCTTGTTCAAGATCTGA  Raphanus sativus cv Early Scarlet Globe
EY930012       <-- TGTTCGCCTTCTTCCCTAGCCAGTACGATCCCACCTTGTTCAAGATCTGA  Raphanus sativus var. oleiformis
EY917240       <-- TGTTCGCCTTCTTCCCTAGCCAGTACGATCCCACCTTGTTCAAGATCTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY898181       <-- TGTTCGCCTTCTTCCCTAGCCAGTACGATCCCACCTTGTTCAAGATCTGA  Raphanus raphanistrum subsp. maritimus
FD947813       <-- TGTTCGCCTTCTTCCCTAGCCAGTAAGATCCCACCTTGTTCAAGATCTGA  Raphanus sativus cv Early Scarlet Globe
FY440554       --> ..................................................  Raphanus sativus cv GSK3-1
EX768375       --> TGTTCGCCTTCTTCCCTAGCCAGTAAGATCCCACCTTGTTCAAGATCTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD943687       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX766393       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD976960       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY926312       --> TGTTCGCCTTCTTCCCTAGCCAGTACGATCCCACCTTGTTCAAGA.....  Raphanus sativus var. oleiformis
EY934668       --> TGTTCGCCTTCTTCCCTAGCCAGTAAGATCCCACCTTGTTCAAGATCTGA  Raphanus sativus cv Early Scarlet Globe

               701    -    751
UN14257        --> TCCATTCTCTCTAGATCTCTCTCTCTATCGCCGAGATCGGAGGAGGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762029       <-- ..................................................
FD981180       <-- TCCATTCTCTCTAGATCTCTCTC--TATCGCCGAGATCc...........
EY923613       <-- TCCATTCTCTCTAGATCTCTCTCTCTct......................
FD938654       <-- ..................................................
FD569481       <-- TCCATTCTCTCTctctatcgccgagatcggagcc................
EV552598       <-- TCCATTCTCTCTctctatcgccgagatcggaggcc...............
EY938563       <-- TCC----------ATTCTCTCTCTCTATCGCCGAGATCGGAGGAGGAAGA
EY930012       <-- TCCATTCTCTCTAGATCTCTCTCTCTATCGCCGAGATCGGAGcc......
EY917240       <-- TCCATTCTCTCTAGATCTCTCTC--TATCGCCGAGATCGGAGGAGGA---
EY898181       <-- TCCATTCTCTCTAGATCTCTCTCTCTATCGCCGAGATCGGAGGAGGAAGA
FD947813       <-- TCCATTCTCTCTctctatcgccgagatcggaggacc..............
FY440554       --> ..................................................
EX768375       --> TCCATTCTCTCTctatcgccga............................
FD943687       --> ..................................................
EX766393       --> ..................................................
FD976960       --> ..................................................
EY926312       --> ..................................................
EY934668       --> TCCATTCTCTCTctctatcgccgag.........................

               751    -    801
UN14257        --> AGCTTCGCTCTATCACCCGCTTCGTTTCTTTTACATCAGTATAATGTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762029       <-- ..................................................
FD981180       <-- ..................................................
EY923613       <-- ..................................................
FD938654       <-- ..................................................
FD569481       <-- ..................................................
EV552598       <-- ..................................................
EY938563       <-- AGCTTCGCTCTATCACCCGCTTCGTTTCTTTTACcc..............
EY930012       <-- ..................................................
EY917240       <-- AGCTTCGCTCTATCACCCGCTTCGTTTCTTTTACATCACTATAATGTCCA
EY898181       <-- AGCTTCGCTCTATCACCCGCTTCGTTTCTTTTACATCAGTATAATGTCCA
FD947813       <-- ..................................................
FY440554       --> ..................................................
EX768375       --> ..................................................
FD943687       --> ..................................................
EX766393       --> ..................................................
FD976960       --> ..................................................
EY926312       --> ..................................................
EY934668       --> ..................................................

               801    -    851
UN14257        --> ATTATGCTTTGACACGTAGTAATGTGAAAATAATAGATGTGGATTGCGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX762029       <-- ..................................................
FD981180       <-- ..................................................
EY923613       <-- ..................................................
FD938654       <-- ..................................................
FD569481       <-- ..................................................
EV552598       <-- ..................................................
EY938563       <-- ..................................................
EY930012       <-- ..................................................
EY917240       <-- ATTATGCTTTGACACGTAGTAATGTGAAAATAATAGATGTGGATTGCGGA
EY898181       <-- ATTATcc...........................................
FD947813       <-- ..................................................
FY440554       --> ..................................................
EX768375       --> ..................................................
FD943687       --> ..................................................
EX766393       --> ..................................................
FD976960       --> ..................................................
EY926312       --> ..................................................
EY934668       --> ..................................................

               851    -    901
UN14257        --> ACTAGCCC
                   ~~~~~~~~
EX762029       <-- ........
FD981180       <-- ........
EY923613       <-- ........
FD938654       <-- ........
FD569481       <-- ........
EV552598       <-- ........
EY938563       <-- ........
EY930012       <-- ........
EY917240       <-- ACTAGCCC
EY898181       <-- ........
FD947813       <-- ........
FY440554       --> ........
EX768375       --> ........
FD943687       --> ........
EX766393       --> ........
FD976960       --> ........
EY926312       --> ........
EY934668       --> ........