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Alignment for radish unigene UN14258

               1      -     51
UN14258        --> TTTTTGTATCTTAAAGCTCCACCTCTCTTATCCATCCTCCTCCTCATTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539871       <-- ..................................................
FD960323       <-- ..................................................
FD936518       <-- ..................................................
EY936767       <-- ..................................................
EX750686       <-- ..................................................
FD944952       <-- ..................................................
FD544210       --> TTTTTGTATCTTAAAGCTCCACCTCTCTTATCCATCCTCCTCCTCATTCT
EY941127       --> ..................................................
EY907033       --> ..................................................
FD962174       --> ..................................................
FD940705       --> ..................................................
EX770352       --> ..................................................

               51     -    101
UN14258        --> CTCTACCAACAGCTATGGCCACCGACCCGCCAATCCGAATCGGAGTAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539871       <-- ..................................................
FD960323       <-- ..................................................
FD936518       <-- ..................................................
EY936767       <-- ..................................................
EX750686       <-- ..................................................
FD944952       <-- ..................................................
FD544210       --> CTCTACCAACAGCTATGGCCACCGACCCGCCAATCCGAATCGGAGTAATG
EY941127       --> ..................................................
EY907033       --> ..................................................
FD962174       --> ..................................................
FD940705       --> ..................................................
EX770352       --> ..................................................

               101    -    151
UN14258        --> GGCTGCGCCGAAATCGCCCGCAAAGTCTCACGCGCCATCAACCTCGCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539871       <-- ..................................................
FD960323       <-- ..................................................
FD936518       <-- ..................................................
EY936767       <-- ..................................................
EX750686       <-- ..................................................
FD944952       <-- ..................................................
FD544210       --> GGCTGCGCCGAAATCGCCCGCAAAGTCTCACGCGCCATCAACCTCGCTCC
EY941127       --> ..................................................
EY907033       --> ..................................................
FD962174       --> ..................................................
FD940705       --> ..................................................
EX770352       --> ..................................................

               151    -    201
UN14258        --> AAACGCCACCATCGCCGCCGTCGCAAGCCGCTCCTTTGAGAAAGCTAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539871       <-- ..................................................
FD960323       <-- ..................................................
FD936518       <-- ..................................................
EY936767       <-- ..................................................
EX750686       <-- ..................................................
FD944952       <-- ..................................................
FD544210       --> AAACGCCACCATCGCCGCCGTCGCAAGCCGCTCCTTTGAAAAAGCTAAAT
EY941127       --> ........gCATCGCCGCCGTCGCAAGCCGCTCCTTTGAGAAAGCTAAAT
EY907033       --> ..................................................
FD962174       --> ..................................................
FD940705       --> ..................................................
EX770352       --> ..................................................

               201    -    251
UN14258        --> CTTTCGCTACATCCAACGGCTACCCTGAATCGACCAAAATCCACGGCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539871       <-- ..................................................
FD960323       <-- ..................................................
FD936518       <-- ..................................................
EY936767       <-- ..................................................
EX750686       <-- ..................................................
FD944952       <-- ..................................................
FD544210       --> CTTTCGCTACATCCAACGGCTACCCTGAATCGACCAAAATCCACGGCTCT
EY941127       --> CTTTCGCTACATCCAACGGCTACCCTGAATCGACCAAAATCCA-GGCTCT
EY907033       --> ..................................................
FD962174       --> ..................................................
FD940705       --> ..................................................
EX770352       --> ..................................................

               251    -    301
UN14258        --> TACGAATCGATTCTCGAAGATCCGGAGGTAGACGCGCTCTACGTTCCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539871       <-- ..................................................
FD960323       <-- ..................................................
FD936518       <-- ..................................................
EY936767       <-- ..................................................
EX750686       <-- ..................................................
FD944952       <-- ..................................................
FD544210       --> TACGAATCGATTCTCGAAGATCCGGAGGTAGACGCGCTCTACGTTCCTCT
EY941127       --> TACGAATCGATTCTCGAAGATCCGGAGGTAGACGCGCTCTACGTTCCTCT
EY907033       --> .....................gCGGAGGTAGACGCGCTCTACGTTCCTCT
FD962174       --> ..................................................
FD940705       --> ..................................................
EX770352       --> ..................................................

               301    -    351
UN14258        --> ACCCACTAGTCTCCACGTCGAGTGGGCCATACGCGCCGCCGAGAAAGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539871       <-- ..................................................
FD960323       <-- ..................................................
FD936518       <-- ..................................................
EY936767       <-- ..................................................
EX750686       <-- ..................................................
FD944952       <-- ..................................................
FD544210       --> ACCCACTAGTCTCCACGTCGAGTGGGCCATACGCGCCGCCGAGAAAGGGA
EY941127       --> ACCCACTAGTCTCCACGTCGAGTGGGCCATACGCGCCGCGGAGAAAGGGA
EY907033       --> ACCCACTAGTCTCCACGTCGAGTGGGCCATACGCGCCGCCGAGAAAGGGA
FD962174       --> ..................................................
FD940705       --> ..................................................
EX770352       --> ..................................................

               351    -    401
UN14258        --> AACACATCCTTCTTGAGAAGCCCGTCGCGTTGAATGTAGCTGAGTTTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539871       <-- ..................................................
FD960323       <-- ..................................................
FD936518       <-- ..................................................
EY936767       <-- ..................................................
EX750686       <-- ..................................................
FD944952       <-- ..................................................
FD544210       --> AACACATCCTTCTTGAGAAGCCCGTCGCGTTGAATGTAGCTGAGTTTGAT
EY941127       --> AACACATCCTTCTTGAGAAGCCCGTCGCGTTGAATGTAGCTGAGTTTGAT
EY907033       --> AACACATCCTTCTTGAGAAGCCCGTCGCGTTGAATGTAGCTGAGTTTGAT
FD962174       --> ..................................................
FD940705       --> ..................................................
EX770352       --> ..................................................

               401    -    451
UN14258        --> AAGATCGTTGCGGCTTGTGAAGCTAATGGTGTTCAGATTATGGATGGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539871       <-- ..................................................
FD960323       <-- ..................................................
FD936518       <-- ..................................................
EY936767       <-- ..................................................
EX750686       <-- ..................................................
FD944952       <-- ..................................................
FD544210       --> AAGATCGTTGCGGCTTGTGAAGCTAATGGTGTTCAGATTATGGATGGTAC
EY941127       --> AAGATCGTTGCGGCTTGTGATGCTAACGGTGTTCAGATTATGGATGGTAC
EY907033       --> AAGATCGTTGCGGCTTGTGAAGCTAATGGTGTTCAGATTATGGATGGCAC
FD962174       --> ..................................................
FD940705       --> ..................................................
EX770352       --> ..................................................

               451    -    501
UN14258        --> TATGTGGGTTCATAATCCTAGAACTGCTAAGCTTAAGGAGTTTCTGTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539871       <-- ..................................................
FD960323       <-- ..................................................
FD936518       <-- ..................................................
EY936767       <-- ..................................................
EX750686       <-- ..................................................
FD944952       <-- ..................................................
FD544210       --> TATGTGGGTTCATAATCCTAGAACTGCTAAGCTTATGGAGTTTCTGTCTG
EY941127       --> TATGTGGGTTCATAATCCTAGAACTGCTAAGCTTAAGGAGTTTCTGTCTG
EY907033       --> TATGTGGGTTCATAATCCTAGAACTGCTAAGCTTAAGGAGTTTCTGTCTG
FD962174       --> ..................................................
FD940705       --> ..................................................
EX770352       --> ..................................................

               501    -    551
UN14258        --> ATTCCGACCGCTTTGGTCAGCTCAAAACCGTACAGAGTTGCTTCTCATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539871       <-- ..................................................
FD960323       <-- ..................................................
FD936518       <-- ..................................................
EY936767       <-- ..................................................
EX750686       <-- ..................................................
FD944952       <-- ..................................................
FD544210       --> ATTCGGACCGCTTTGGTCAGCTCAAAATCGTACAGAGTTGCTTCTCATTT
EY941127       --> ATTCCTACCGCTTTGGTCAGCTCAAAACCGTACAGAGTTGCTTCTCATTT
EY907033       --> ATTCCGACCGCTTTGGTCAGCTCAAAACCGTACAGAGTTGCTTCTCATTT
FD962174       --> ..................................................
FD940705       --> ..................................................
EX770352       --> ..................................................

               551    -    601
UN14258        --> GCTGGAGACGAAGATTTCCTCAAGAACGACATCCGTGTGAAGCCAGGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539871       <-- ..................................................
FD960323       <-- ..................................................
FD936518       <-- ..................................................
EY936767       <-- ..................................................
EX750686       <-- ..................................................
FD944952       <-- ..................................................
FD544210       --> GCTGGAGACGAAGATTTTCTCAAAAACGACATCCGTGTGAAGCCAGGTCT
EY941127       --> GCTGGAGACGAAGATTTCCTCAAGAACGACATCCGTGTGAAGCCAGGTCT
EY907033       --> GCTGGAGACGAAGATTTCCTCAAGAACGACATCCGTGTGAAGCCAGGTCT
FD962174       --> ..................................................
FD940705       --> ..................................................
EX770352       --> ..................................................

               601    -    651
UN14258        --> TGATGGGCTTGGTGCGCTCGGAGACGCTGGATGGTACGCGATTCAGAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539871       <-- ..................................................
FD960323       <-- ..................................................
FD936518       <-- ..................................................
EY936767       <-- ..................................................
EX750686       <-- ..................................................
FD944952       <-- ..................................................
FD544210       --> TGATGGGCTTGGTGCGCTCGGAGACGCTGGATGGTACGCGATTC-GAGCA
EY941127       --> TGATGGGCTCGGTGCGCTCGGAGACGCTGGATGGTACGCGAT-CAGAGCA
EY907033       --> TGATGGGCTTGGTGCGCTCGGAGACGCTGGATGGTACACCATCC-GAGCA
FD962174       --> ...........................gGGATGGTACGCGAT-CAGAGCA
FD940705       --> ..................................................
EX770352       --> ..................................................

               651    -    701
UN14258        --> ACTCTCTTAGCCAACAACTTCGAGCTTCCCAATATCGTCACAGCCTTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539871       <-- .....CTTAGCCAACAACTTCGAGCTCCCCAATATCGTCACAGCCTTTCC
FD960323       <-- .........GCCAACAACTTCGAGCTTCCCAATACTGTCACAGCCTTTCC
FD936518       <-- ..................................................
EY936767       <-- ..................................................
EX750686       <-- ..................................................
FD944952       <-- ..................................................
FD544210       --> ACACTCTTAGCCAACAACTTCGAGCTCCCCAATATCGTCACAGCCTTTCC
EY941127       --> ACTCTCTTAGCCAACAACTTCGAGCTTCCGAATACCGTCACAGCCTTTCC
EY907033       --> ACTCTCTTAGCCAACAACTTCGAGCTTCCCAATACCGTCACAGCCTTTCC
FD962174       --> ACTCTCTTAGCCAACAACTTCGAGCTTCCGAATACCGTCACAGCCTTTCC
FD940705       --> ..................................................
EX770352       --> ..................................................

               701    -    751
UN14258        --> CGGCGCTGTGCTTAACGAAGCAGGAGTGGTACTCTCATGTGGAGCTTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539871       <-- CGGAGCTGTGCTTAACGAAGCAGGAGTGATTCTCTCATGTGGAGCTTCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960323       <-- GGGCGCTATGCTTAATGATGCAGGAGTGATTCTCTCATGTGGAGCTTCTC  Raphanus raphanistrum subsp. maritimus
FD936518       <-- ............gAACGAAGCAGGAGTGGTACTCTCATGTGGAGCTTCTC  Raphanus sativus var. oleiformis
EY936767       <-- ...................GCAGGAGTGGTACTCTCATGTGGAGCTTCTC  Raphanus sativus cv Early Scarlet Globe
EX750686       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD944952       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD544210       --> CGGAGCTGTGCTTAACGAA...............................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY941127       --> CGGCGCTGTGCTTAACGAAGCAGGAGTGGTACTCTCATGTGGAGCTTCTC  Raphanus sativus cv Early Scarlet Globe
EY907033       --> CGGCGCTGTGCTTAACGAAGCAGGAGTGATTCTCTCATGTGGAGCTTCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962174       --> CGGCGCTGTGCTTAACGAAGCAGGAGTGGTACTCTCATGTGGAGCTTCTC  Raphanus raphanistrum subsp. maritimus
FD940705       --> ............gAACGAAGCAGGAGTGGTACTCTCATGTGGAGCTTCTC  Raphanus sativus var. oleiformis
EX770352       --> ..................................................  Raphanus raphanistrum subsp. landra

               751    -    801
UN14258        --> TGACTTGGGAAGACGGACGAACCGCTACCATATACTGTTCCTTCTTGGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539871       <-- TGACTTGGGAAGACGGACGAACCGCTACCATATACTGTTCCTTCTTGGCA
FD960323       <-- TGACTTGGGAAGACGGACGAACCGCTACCATATACTGTTCCTTCTTGGCA
FD936518       <-- TGACTTGGGAAGACGGACGAACCGCTACCATATACTGTTCCTTCTTGGCA
EY936767       <-- TGACTTGGGAAGACGGACGAACCGCTACCATATACTGTTCCTTCTTGGCA
EX750686       <-- .GACTTGGGAAGACGGACGAACCGCTACCATATACTGTTCCTTCTTGGCA
FD944952       <-- ..................................................
FD544210       --> ..................................................
EY941127       --> TGACTTGGGAAGACGGACGAACCGCTACCATATACTGTTCCTTCTTGGCA
EY907033       --> TGACTTGGGAAGACGGACGAACCGCTACCATATACTGTTCCTTCTTGGCA
FD962174       --> TGACTTGGGAAGACGGACGAACCGCTACCATATACTGTTCCTTCTTGGCA
FD940705       --> TGACTTGGGAAGACGGACGAACCGCTACCATATACTGTTCCTTCTTGGCA
EX770352       --> ..................................................

               801    -    851
UN14258        --> AACTTGACAATGGAGATAAACGCCATTGGAACCAACGGCACGCTTAGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539871       <-- AACTTAACAATGGAGATAAACGCCATTGGAACTAACGGCACGCTTAGAGT
FD960323       <-- AACTTGACAATGGAGATAAACGCCATTGGAACCAACGGCACGCTTAGTGT
FD936518       <-- AACTTGACAATGGAGATAAACGCCATTGGAACCAACGGCACGCTTAGTGT
EY936767       <-- AACTTGACAATGGAGATAAACGCCATTGGAACCAACGGCACGCTTAGTGT
EX750686       <-- AACTTGACAATGGAGATAAACGCCATTGGAACCAACGGCACGCTTAGTGT
FD944952       <-- .........................TTGGAACCAACGGCACGCTTAGTGT
FD544210       --> ..................................................
EY941127       --> AACTTGACAATGGAGATAAACGCCATTGGAACCAACGGCACGCTTAGTGT
EY907033       --> AACTTGACAATGGAGATAAACGCCATTGGAACCAACGGCACGCTTAGTGT
FD962174       --> AACTTGACAATGGAGATAAACGCCATTGGAACCAACGGCACGCTTAGTGT
FD940705       --> AACTTGACAATGGAGATAAACGCCATTGGAACCAACGGCACGCTTAGTGT
EX770352       --> ..................................................

               851    -    901
UN14258        --> TCATGATTTCATTATCCCGTTTAAGGAGACCGAGGCATCGTTCACAACGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539871       <-- TCATGATTTCATTATCCCGTTTAAGGAGACCGAGGCATCGTTCACAACGA
FD960323       <-- TCATGATTTCATTATCCCGTTTAAGGAGACCGAGGCATCGTTCACAACGA
FD936518       <-- TCATGATTTCATTATCCCGTTTAAGGAGACCGAGGCATCGTTCACAACGA
EY936767       <-- TCATGATTTCATTATCCCGTTTAAGGAGACCGAGGCATCGTTCACAACGA
EX750686       <-- TCATGATTTCATTATCCCGTTTAAGGAGACCGAGGCACCGTTCACAACGA
FD944952       <-- TCATGATTTCATTATCCCGTTTAAGGAGACCGAGGCATCGTTCACAACGA
FD544210       --> ..................................................
EY941127       --> TCATGATTTCATTATCCCGTTTAAG-AGACCGAGGCATCGTTCACA-CGA
EY907033       --> TCATGATTTCATTATCCCGTTTAAG-AGACCGAGGCATCGTTCACAACGA
FD962174       --> TCATGATTTCATTATCCCGTTTAAGGAGACCGAGGCATCGTTCACAACGA
FD940705       --> TCATGATTTCATTATCCCGTTTAAGGAGACCGAGGCATCGTTCACAACGA
EX770352       --> ..................................................

               901    -    951
UN14258        --> GCACTAAAGCTTGGTTCAATGAGTTCGTGACCGCGTGGGTTAATCCCCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539871       <-- GCACTAAAGCTTGGTTTAATGAGTTCGTGACCGCGTGGGTTAATCCCCCG
FD960323       <-- GCACTAAAGCTTGGTTCAATGAATTCGTGACCGCGTGGGTTAATCCCCCG
FD936518       <-- GCACTAAAGCTTGGTTCAATGAGTTCGTGACCGCGTGGGTTAATCCCCCG
EY936767       <-- GCACTAAAGCTTGGTTCAATGAGTTCGTGACCGCGTGGGTTAATCCCCCG
EX750686       <-- GCACTAAAGCTTGGTTCAATGAATTCGTGACCGCGTGGGTTAATCCCCCG
FD944952       <-- GCACTAAAGCTTGGTTCAATGAGTTCGTGACCGCGTGGGTTAATCCCCCG
FD544210       --> ..................................................
EY941127       --> GCACTAAAGCT-GGTTCAATGAGT-CGTGACCGCGTGGGTaat.......
EY907033       --> GCACTAAAGCTTGGTTCAATGAGTTCGTGACCGCGTGGGTTAATCCCCCG
FD962174       --> GCACTAAAGCTTGGTTCAATGAGTTCGTGACCGCGTGGGTTAATCCCCCG
FD940705       --> GCACTAAAGCTTGGTTCAATGAGTTCGTGACCGCGTGGGTTAATCCCCCG
EX770352       --> ...........................gggCCGCGTGGGTTAATCCCCCG

               951    -   1001
UN14258        --> AGCGAGCACACGGTTAAGACGGAGCTTCCGCAAGAGGCATGTATGGTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539871       <-- AGCGAGCACACGGTTAAGACGGAGCTTCCGCAAGAGGCATGTATGGTGAG
FD960323       <-- AGCGAGCATACGGTTAAGACGGAGCTTCCGCAAGAGGCATGTATGGTGAG
FD936518       <-- AGCGAGCACACGGTTAAGACGGAGCTTCCGCAAGAGGCATGTATGGTGAG
EY936767       <-- AGCGAGCACACGGTTAAGACGGAGCTTCCGCAAGAGGCATGTATGGTGAG
EX750686       <-- AGCGAGTATACGGTTAAGACGGAGCTTCCGCAAGAGGCATGTATGGTGAG
FD944952       <-- AGCGAGCACACGGTTAAGACGGAGCTTCCGCAAGAGGCATGTATGGTGAG
FD544210       --> ..................................................
EY941127       --> ..................................................
EY907033       --> AGCGAGCAC.........................................
FD962174       --> AGCGAGCACACGGTTAAGACGGAGCTTCCGCAAGAGGCATGTATGGTGAG
FD940705       --> AGCGAGCACACGGTTAAGACGGAGCTTCCGCAAGAGGCATGTATGGTGAG
EX770352       --> AGCGAGCACACGGTTAAGACGGAGCTTCCGCAAGAGGCATGTATGGTGAG

               1001   -   1051
UN14258        --> AGAGTTTGCTCGATTGGTTGGTGAAATCAAGAACAAAGGTGCAAAGCCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539871       <-- AGAGTTTGCTCGGTTGGTTGGTGAAATCAAGAACAAAGGTGCAAAGCCTG
FD960323       <-- AGAGTTTGCTCGATTGGTTGGTGAAATCAAGAACAAAGGTGCAAAGCCTG
FD936518       <-- AGAGTTTGCTCGATTGGTTGGTGAAATCAAGAACAAAGGTGCAAAGCCTG
EY936767       <-- AGAGTTTGCTCGATTGGTTGGTGAAATCAAGAACAAAGGTGCAAAGCCTG
EX750686       <-- AGAGTTTGCTCGATTGGTTGGTGAAATCAAGAACAAAGGTGCAAAGCCTG
FD944952       <-- AGAGTTTGCTCGATTGGTTGGTGAAATCAAGAACAAAGGTGCAAAGCCTG
FD544210       --> ..................................................
EY941127       --> ..................................................
EY907033       --> ..................................................
FD962174       --> AGAGTTTGCTCGATTGGTTGGTGAAATCAAGAACAAAGGTGCAAAGCCTG
FD940705       --> AGAGTTTGCTCGATTGGTTGGTGAAATCAAGAACAAAGGTGCAAAGCCTG
EX770352       --> AGAGTTTGCCCGATTGGTTGGTGAAATCAAGAACAAAGGTGCAAAGCCTG

               1051   -   1101
UN14258        --> ATGGGTTTTGGCCGAGCATTAGCCGGAAGACACAGCTAGTGGTTGATGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539871       <-- ATGGGTTTTGGCCGAGCATTAGCCGGAAGACACAGCTAGTGGTTGATGCT
FD960323       <-- ATGGGTTTTGGCCGAGCATTAGCCGGAAGACACAGCTAGTGGTTGATGCT
FD936518       <-- ATGGGTTTTGGCCGAGCATTAGCCGGAAGACACAGCTAGTGGTTGATGCT
EY936767       <-- ATGGGTTTTGGCCGAGCATTAGCCGGAAGACACAGCTAGTGGTTGATGCT
EX750686       <-- ATGGGTTTTGGCCGAGCATTAGCCGGAAGACACAGCTAGTGGTTGATGCT
FD944952       <-- ATGGGTTTTGGCCGAGCATTAGCCGGAAGACACAGCTAGTGGTTGATGCT
FD544210       --> ..................................................
EY941127       --> ..................................................
EY907033       --> ..................................................
FD962174       --> ATGGGTTTTGGCCGAGCATTAGCCGGAAGACACAGCTAGTGGTTGATGCT
FD940705       --> ATGGGTTTTGGCCGAGCATTAGCCGGAAGACACAGCTAGTGGTTGATGCT
EX770352       --> ATGGGTTTTGGCTGAGCATTAGCCGGAAGACACAGCTAGTGGTTGATGCT

               1101   -   1151
UN14258        --> GTTAAGGAGTCTGTTGATAAAAACTGTGAACAGATTAGTCTCTCTGGTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539871       <-- GTTAAGGAGTCTGTTGATAAAAACTGTGAACAGATTAGTCTCTCTGGTCG
FD960323       <-- GTTAAGGAGTCTGTTGATAAAAACTGTGAACAGATTAGTCTCTCTGGTCG
FD936518       <-- GTTAAGGAGTCTGTTGATAAAAACTGTGAACAGATTAGTCTCTCTGGTCG
EY936767       <-- GTTAAGGAGTCTGTTGATAAAAACTGTGAACAGATTAGTCTCTCTGGTCG
EX750686       <-- GTTAAGGAGTCTGTTGATAAAAACTGTGAACAGATTAGTCTCTCTGGTCG
FD944952       <-- GTTAAGGAGTCTGTTGATAAAAACTGTGAACAGATTAGTCTCTCTGGTCG
FD544210       --> ..................................................
EY941127       --> ..................................................
EY907033       --> ..................................................
FD962174       --> GTTAAGGAGTCTGTTGATAAAAACTGTGAACAGATTAGTCTCTCTGGTCG
FD940705       --> GTTAAGGAGTCTGTTGATAAAAACTGTGAACAGATTAGTCTCTCTGGTCG
EX770352       --> GTTAAGGAGTCTGTTGATAAAAACTGTGAACAGATTAGTCTCTCTGGTCG

               1151   -   1201
UN14258        --> CTGAAGGGAAGGGCTAAAATTAGTAATGTTGTCATGAGTCCTCTCATCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539871       <-- CTGAAGGGAAGGGCTAGAATTAGTAATGTTGTCATGAGTCCTCTCGTCTC
FD960323       <-- CTGAAGGGAAGGCCTAAAATTAGTAATGTTGTCATGAGTCCTCTCATCTC
FD936518       <-- CTGAAGGGAAGGGCTAAAATTAGTAATGTTGTCATGAGTCCTCTCATCTT
EY936767       <-- CTGAAGGGAAGGGCTAAAATTAGTAATGTTGTCATGAGTCCTCTCATCTC
EX750686       <-- CTGAAGGGAAGGCCTAAAATTAGTAATGTTGTCATGAGTCCTCTCATCTC
FD944952       <-- CTGAAGGGAAGGGCTAAAATTAGTAATGTTGTCATGAGTCCTCTCATCTC
FD544210       --> ..................................................
EY941127       --> ..................................................
EY907033       --> ..................................................
FD962174       --> CTGAAGGGAAGGGCTAAAATTAGTAATGTTGTCATGAGTCCTCTCATCTC
FD940705       --> CTGAAGGGAAGGGCTAAAATTAGTAATGTTGTCATGAGTCCTCTCATCTC
EX770352       --> CTGAAGGGAAGGGCTAAAATTAGTAATGTTGTCATGAGTCCTCTCATCTC

               1201   -   1251
UN14258        --> TCTGTTTTTAAACTTTGATCATCGGTTAAGTGTTGTTATCCTTCTGCCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539871       <-- TCTGTTTTCAAACTTTGATCATCCGTTAAGTGTTGTTATCCTTCTGCCCG
FD960323       <-- TCTGTTTTCAAACTTTGATCATCCGTTAAGTGTTGTTATCCTTCTGCCCG
FD936518       <-- TCTGTTTTTAAACTTTGATCATCGGTTAAGTGTTGTTATCCTTCTGCCCG
EY936767       <-- TCTGTTTTTAAACTTTGATCATCGGTTAAGTGTTGTTATCCTTCTGCCCG
EX750686       <-- TCTGTTTTCAAACTTTGATCATCCGTTAAGTGTTGTTATCCTTCTGCCCG
FD944952       <-- TCTGTTTTTAAACTTTGATCATCGGTTAAGTGTTGTTATCCTTCTGCCCG
FD544210       --> ..................................................
EY941127       --> ..................................................
EY907033       --> ..................................................
FD962174       --> TCTGTTTTTAAACTTTGATCATCGGTTAAGTGTTGTTATCCTTCTGCC..
FD940705       --> TCTGTTTTTAAACTTTGATCATCGGTTAAGTGTTGTTATCCTTCTGCCCG
EX770352       --> TCTGTTTTGAAACTTT-ATCATCGGTTAAGTGTTGTTATCCTTCTGCCCG

               1251   -   1301
UN14258        --> GTTGTGCCTTGTATCCGTACTGTTGTATGTGTGTTGTTGCTACTAATATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539871       <-- GTTGTGCCTTGTATCCGTACTGTTGTATGTGTGTTGTTGCTACTAATATT
FD960323       <-- GTTGTGCCTTGTATCCGTACTGTTGTATGTGTGTTGTTGCTACTAATATT
FD936518       <-- GTTGTGCCTTGTATCCGTACTGTTGTATGTGTGTTGTTGCTACTAATATT
EY936767       <-- GTTGTGCCTTGTATCCGTACTGTTGTATGTGTGTTGTTGCTACTAATATT
EX750686       <-- GTTGTGC-TTGTATCCGTACTGTTGTATGTGTGTTGTTGCTACTAATATT
FD944952       <-- GTTGTGCCTTGTATCCGTACTGTTGTATGTGTGTTGTTGCTACTAATATT
FD544210       --> ..................................................
EY941127       --> ..................................................
EY907033       --> ..................................................
FD962174       --> ..................................................
FD940705       --> GTTGTGCCTTGTATCCGTACTGTTGTATGTGTGTTGTTGCTACTAATATT
EX770352       --> GTTGTGCCTTGTATCCGTACTGTTGTATGTGTGTTGTTGCTACTAATATT

               1301   -   1351
UN14258        --> TTGAGTTTAGTGTTGTTATACTATTTGTTACTCATTGTCACCTGTGTATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539871       <-- TTGAGTTTAATGTTGTTATACTATTTGTTACTCATTGTCACCTGTGTATA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960323       <-- TTGAGTTTAGTGTTGTTATACTATTTGTTACTCATTGTCACCTGTGTATT  Raphanus raphanistrum subsp. maritimus
FD936518       <-- TTGAGTTTAGTGTTGTTATACTATTTGTTACc..................  Raphanus sativus var. oleiformis
EY936767       <-- TTGAGTTTAatgc.....................................  Raphanus sativus cv Early Scarlet Globe
EX750686       <-- TTGAGTTTAGTGTTGTTATACTATTTGTTACTC.................  Raphanus raphanistrum subsp. maritimus
FD944952       <-- TTGAGTTTAATGTTGTTGTACT............................  Raphanus sativus cv Early Scarlet Globe
FD544210       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY941127       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY907033       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962174       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD940705       --> TTGAGTTTAGTGTTGTTATACTATTTGTTACca.................  Raphanus sativus var. oleiformis
EX770352       --> TTGAGTTTAATGTTGTTGTACT............................  Raphanus raphanistrum subsp. landra

               1351   -   1401
UN14258        --> AGCACTTGTG
                   ~~~~~~~~~~
FD539871       <-- AGC.......
FD960323       <-- AGCACTTGTG
FD936518       <-- ..........
EY936767       <-- ..........
EX750686       <-- ..........
FD944952       <-- ..........
FD544210       --> ..........
EY941127       --> ..........
EY907033       --> ..........
FD962174       --> ..........
FD940705       --> ..........
EX770352       --> ..........