RadishBase

| | | |
Alignment for radish unigene UN14310

               1      -     51
UN14310        --> GGGCACCTTTGGGAACCACACACTGCCTCTATTGTTCACTCAAGAACATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD538325       <-- ..................................................
EV571046       <-- ..................................................
EW731015       <-- ..................................................
FD975281       <-- ..................................................
EV571045       <-- ..................................................
EY902564       <-- ..................................................
FD548008       <-- ..................................................
EY936939       <-- ..................................................
EY910444       <-- ..................................................
EY902238       <-- ..................................................
EV542842       <-- ..................................................
FD946702       --> GGGCACCTTTCTTAACCACACACTGCCTCTATTGTTCACTCAAGAACATA
EV565773       --> ..........GGGAACCACACACTGCCTCTATTGTTCACTCAAGAACATA
EW726489       --> ..........GGGAACCACACACTGCCTCTATTGTTCACTCAAGAACATA
FD570237       --> ..........GGGAACCACACACTGCCTCTATTGTTCACTCAAGAACATA
EV537511       --> ...........GGAACCACACACTGCCTCTATTGTTCACTCAAGAACATA
EV538939       --> ...........GGAACCACACACTGCCTCTATTGTTCACTCAAGAACATA
EW725861       --> ...........GGAACCACACACTGCCTCTATTGTTCACTCAAGAACATA
EY905927       --> ...........GGAACCACACACTGCCTCTATTGTTCACTCAAGAACATA
EY922474       --> ...........GGAACCACACACTGCCTCTATTGTTCACTCAAGAACATA
EY937607       --> ...........GGAACCACACACTGCCTCTATTGTTCACTCAAGAACATA
FD564567       --> ...........GGAACCACACACTGCCTCTATTGTTCACTCAAGAACATA
FD570250       --> ...........GGAACCACACACTGCCTCTATTGTTCACTCAAGAACATA
FD945843       --> ...........GGAACCACACACTGCCTCTATTGTTCACTCAAGAACATA
EX889992       --> ...............ggACACACTGCCTCTATTGTTCACTCAAGAACATA
EY941343       --> ...............ggACACACTGCCTCTATTGTTCACTCAAGAACATA
EV565257       --> ..................................................
EY915618       --> ..................................................

               51     -    101
UN14310        --> TCATTTCTTTGTGAGCTTTAGTGATCTAAACCAATGGCGAACTCGACGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD538325       <-- ............GAGCTTTAGTGATCTAAACCAATGGCGA-CTCGACGAT
EV571046       <-- ...................................GGCGAACTCGACGAT
EW731015       <-- ..................................................
FD975281       <-- ..................................................
EV571045       <-- ..................................................
EY902564       <-- ..................................................
FD548008       <-- ..................................................
EY936939       <-- ..................................................
EY910444       <-- ..................................................
EY902238       <-- ..................................................
EV542842       <-- ..................................................
FD946702       --> TCATTTCTTTGTGAGCTTTAGTGATCTAAACCAATGGCGAACTCGACGAT
EV565773       --> TCATTTCTTTGTGAGCTTTAGTGATCTAAACCAATGGCGAACTCGACGAT
EW726489       --> TCATTTCTTTGTGAGCTTTAGTGATCTAAACCAATGGCGAACTCGACGAT
FD570237       --> TCATTTCTTTGTGAGCTTTAGTGATCTAAACCAATGGCGAACTCGACGAT
EV537511       --> TCATTTCTTTGTGAGCTTTAGTGATCTAAACCAATGGCGAACTCGACGAT
EV538939       --> TCATTTCTTTGTGAGCTTTAGTGATCTAAACCAATGGCGAACTCGACGAT
EW725861       --> TCATTTCTTTGTGAGCTTTAGTGATCTAAACCAATGGCGAACTCGACGAT
EY905927       --> TCATTTCTTTGTGAGCTTTAGTGATCTAAACCAATGGCGAACTCGACGAT
EY922474       --> TCATTTCTTTGTGAGCTTTAGTGATCTAAACCAATGGCGAACTCGACGAT
EY937607       --> TCATTTCTTTGTGAGCTTTAGTGATCTAAACCAATGGCGAACTCGACGAT
FD564567       --> TCATTTCTTTGTGAGCTTTAGTGATCTAAACCAATGGCGAACTCGACGAT
FD570250       --> TCATTTCTTTGTGAGCTTTAGTGATCTAAACCAATGGCGAACTCGACGAT
FD945843       --> TCATTTCTTTGTGAGCTTTAGTGATCTAAACCAATGGCGAACTCGACGAT
EX889992       --> TCATTTCTTTGTGAGCTTTAGTGATCTAAACCAATGGCGAACTCGACGAT
EY941343       --> TCATTTCTTTGTGAGCTTTAGTGATCTAAACCAATGGCGAACTCGACGAT
EV565257       --> ..................................................
EY915618       --> ..................................................

               101    -    151
UN14310        --> TCTTCTTGATTACTGGCCAAGCATGTTCTGTATGAGGGCTAGAGTCGCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD538325       <-- TCTTCTTGAT-ACTGGCCAAGCATGTTCTGTATGAGGGCTAGAGTCGCGT
EV571046       <-- TCTTCTTGATTACTGGCCAAGCATGTTCTGTATGAGGGCTAGAGTCGCGT
EW731015       <-- ...TCTTGAT-ACTGGCCAAGCATGTTCTGTATGAGGGCTAGAGTCGCGT
FD975281       <-- ..................AAGCATGTTCTGTATGAGGGCTAGAGTCGCGT
EV571045       <-- ..............................................GCGT
EY902564       <-- ..................................................
FD548008       <-- ..................................................
EY936939       <-- ..................................................
EY910444       <-- ..................................................
EY902238       <-- ..................................................
EV542842       <-- ..................................................
FD946702       --> TCTTCTTGATTACTGGCCAAGCATGTTCTGTATGAGGGCTAGAGTCGCGT
EV565773       --> TCTTCTTGATTACTGGCCAAGCATGTTCTGTATGAGGGCTAGAGTCGCGT
EW726489       --> TCTTCTTGATTACTGGCCAAGCATGTTCTGTATGAGGGCTAGAGTCGCGT
FD570237       --> TCTTCTTGATTACTGGCCAAGCATGTTCTGTATGAGGGCTAGAGTCGCGT
EV537511       --> TCTTCTTGATTACTGGCCAAGCATGTTCTGTATGAGGGCTAGAGTCGCGT
EV538939       --> TCTTCTTGATTACTGGCCAAGCATGTTCTGTATGAGGGCTAGAGTCGCGT
EW725861       --> TCTTCTTGATTACTGGCCAAGCATGTTCTGTATGAGGGCTAGAGTCGCGT
EY905927       --> TCTTCTTGATTACTGGCCAAGCATGTTCTGTATGAGGGCTAGAGTCGCGT
EY922474       --> TCTTCTTGATTACTGGCCAAGCATGTTCTGTATGAGGGCTAGAGTCGCGT
EY937607       --> TCTTCTTGATTACTGGCCAAGCATGTTCTGTATGAGGGCTAGAGTCGCGT
FD564567       --> TCTTCTTGATTACTGGCCAAGCATGTTCTGTATGAGGGCTAGAGTCGCGT
FD570250       --> TCTTCTTGATTACTGGCCAAGCATGTTCTGTATGAGGGCTAGAGTCGCGT
FD945843       --> TCTTCTTGATTACTGGCCAAGCATGTTCTGTATGAGGGCTAGAGTCGCGT
EX889992       --> TCTTCTTGATTACTGGCCAAGCATGTTCTGTATGAGGGCTAGAGTCGCGT
EY941343       --> TCTTCTTGATTACTGGCCAAGCATGTTCTGTATGAGGGCTAGAGTCGCGT
EV565257       --> ..................................................
EY915618       --> ..................................................

               151    -    201
UN14310        --> TGAGGGAGAAAGGTGTGGAGTTCGAGGCCAGAGAAGAGGATCTCACGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD538325       <-- TGAGGGAGAAATGTGTGGAGTTCGAGGCCATAGAAGAGGATCTCACGAAC
EV571046       <-- TGAGGGAGAAAGGTGTGGAGTTCGAGGCCAGAGAAGAGGATCTCACGAAC
EW731015       <-- TGAGGGAGAAAGGTGTGGAGTTCGAGGCCAGAGAAGAGGATCTCACGAAC
FD975281       <-- TGAGGGAGAAAGGTGTTGTGTTCGAGGCCAGAGAAGAGGATCTCACGAAC
EV571045       <-- TGAGGGAGAAAGGTGTGGAGTTCGAGGCCAGAGAAGAGGATCTCACGAAC
EY902564       <-- .................................AAGAGGATCTCACGAAC
FD548008       <-- ..................................................
EY936939       <-- ..................................................
EY910444       <-- ..................................................
EY902238       <-- ..................................................
EV542842       <-- ..................................................
FD946702       --> TGAGGGAGAAAGGTGTGGAGTTCGAGGCCAGAGAAGAGGATCTCACGAAC
EV565773       --> TGAGGGAGAAAGGTGTGGAGTTCGAGGCCAGAGAAGAGGATCTCACGAAC
EW726489       --> TGAGGGAGAAAGGTGTGGAGTTCGAGGCCAGAGAAGAGGATCTCACGAAC
FD570237       --> TGAGGGAGAAAGGTGTGGAGTTCGAGGCCAGAGAAGAGGATCTCACGAAC
EV537511       --> TGAGGGAGAAAGGTGTGGAGTTCTAGTCCAGAGAAGAGGATCTCACGAAC
EV538939       --> TGAGGGAGAAATGTGTGGAGTTCGAGGCCAGAGAAGAGGATCTCACGAAC
EW725861       --> TGAGGGAGAAAGGTGTGGAGTTCGAGGCCAGAGAAGAGGATCTCACGAAC
EY905927       --> TGAGGGAGAAATGTGTGGAG..............................
EY922474       --> TGAGGGAGAAAGGTGTGGAGTTCGAGGCCAGAGAAGAGGATCTCACGAAC
EY937607       --> TGAGGGAGAAAGGTGTGGAGTTCGAGGCCAGAGAAGAGGATCTCACGAAC
FD564567       --> TGAGGGAGAAAGGTGTGGAGTTCGAGGCCAGAGAAGAGGATCTCACGAAC
FD570250       --> TGAGGGAGAAGGGTGTGGAGTTCGAGGCCAGAGAAGAGGATCTCACGAAC
FD945843       --> TGAGGGAGAAAGGTGTGGAGTTCGAGGCCAGAGAAGAGGATCTCACGAAC
EX889992       --> TGAGGGAGAAAGGTGTGGAGTTCGAGGCTAGAGAAGAGGATCTCACGAAC
EY941343       --> TGAGGGAGAAAGGTGTGGAGTTCGAGGCCAGAGAAGAGGATCTCACGAAC
EV565257       --> ..................................................
EY915618       --> ..................................................

               201    -    251
UN14310        --> AAGAGCCCTTTGCTCCTCCAAAGTAATCCGATTCACAAGAAGGTCCCGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD538325       <-- AAGAGCCCTTTGCTCCTCCAAAGTAATCCGATTCACAAGAAGGTCCCGGT
EV571046       <-- AAGAGCCCTTTGCTCCTCCAAAGTAATCCGATTCACAAGAAGGTCCCGGT
EW731015       <-- AGGAGCCCTTTGCTCCTCCAAAGTAATCCGATTCACAAGAAGGTCCCGGT
FD975281       <-- AAGAGCCCTTTGCTCCTCCAAAGTAATCCGATTCACAAGAAGGTCCCGGT
EV571045       <-- AAGAGCCCTTTGCTCCTCCAAAGTAATCCGATTCACAAGAAGGTCCCGGT
EY902564       <-- AAGAGCCCTTTGCTCCTCCAAAGTAATCCGATTCACAAGAAGGTCCCGGT
FD548008       <-- ..GAGCCCTTTGCTCCTCCAAAGTAATCCGATTCACAAGAAGGTCCCGGT
EY936939       <-- .................................................T
EY910444       <-- ..................................................
EY902238       <-- ..................................................
EV542842       <-- ..................................................
FD946702       --> AAGAGCCCTTTGCTCCTCCAAAGTAATCCGATTCACAAGAAGGTCCCGGT
EV565773       --> AAGAGCCCTTTGCTCCTCCAAAGTAATCCGATTCACAAGAAGGTCCCGGT
EW726489       --> AAGAGCCCTTTGCTCCTCCAAAGTAATCCGATTCACAAGAAGGTCCCGGT
FD570237       --> AAGAGCCCTTTGCTCCTCCAAAGTAATCCGATTCACAAGAAGGTCCCGGT
EV537511       --> AAGAGCCCTTTGCTCCTCCAAAGTAATCCGATTCACAAGAAGGTCCCGGT
EV538939       --> AAGAGCCCTTTGCTCCTCCAAAGTAATCCGATTCACAAGAAGGTCCCGGT
EW725861       --> AGGAGCCCTTTGCTCCTCCAAAGTAATCCGATTCACAAGAAGGTCCCGGT
EY905927       --> ..................................................
EY922474       --> AAGAGCCCTTTGCTCCTCCAAAGTAATCCGATTCACAAGAAGTTCCCGGT
EY937607       --> AAGAGCCCTTTGCTCCTCCAAAGTAATCCGATTCACAAGAAGGTCCCGGT
FD564567       --> AAGAGCCCTTTGCTCCTCCAAAGTAATCCGATTCACAAGAAGGTCCCGGT
FD570250       --> AAGAGCCCTTTGCTCCTCCAAAGTAATCCGATTCACAAGAAGGTCCCGGT
FD945843       --> AAGAGCCCTTTGCTCCTCCAAAGTAATCCGATTCACAAGAAGGTCCCGGT
EX889992       --> AAGAGCCCTTTGCTCCTCCAAAGTAATCCGATTCACAAGAAGGTCCCGGT
EY941343       --> AAGAGCCCTTTGCTCCTCCAAAGTAATCCGATTCACAAGAAGGTCCCGGT
EV565257       --> .................gCAAAGTAATCCGATTCACAAGAAGGTCCCGGT
EY915618       --> ..................................................

               251    -    301
UN14310        --> TCTGATCCACAATGGTAAACCGGTATGCGAGTCCCTCAATGTTGTCCAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD538325       <-- TCTGATCCACAACGGTAAACCGGTATGCGAGTCCCTCAATGTTGTCCAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV571046       <-- TCTGATCCACAATGGTAAACCGGTATGCGAGTCCCTCAATGTTGTCCAGT  Raphanus raphanistrum subsp. landra
EW731015       <-- TCTGATCCACAATGGTAAACCGGTATGCGAGTCCCTCAATGTTGTCCAGT  Raphanus sativus cv Early Scarlet Globe
FD975281       <-- TCTGATCCACAACGGTAAACCGGTATGCGAGTCTCTCAATGTTGTCCAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571045       <-- TCTGATCCACAATGGTAAACCGGTATGCGAGTCCCTCAATGTTGTCCAGT  Raphanus raphanistrum subsp. landra
EY902564       <-- TCTGATCCACAACGGTAAACCAGTATGCGAGTCTCTCAACGTTGTCCAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD548008       <-- TCTGATCCACAACGGTAAACCGGTATGCGAGTCTCTCAATGTTGTCCAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY936939       <-- TCTGATCCACAATGGTAAACCGGTATGCGAGTCCCTCAATGTTGTCCAGT  Raphanus sativus cv Early Scarlet Globe
EY910444       <-- .....TCCACAACGGTAAACCGGTATGCGAGTCTCTCAATGTTGTCCAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY902238       <-- ..............................................CAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542842       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946702       --> TCTGATCCACAATGGTAAACCGGTATGCGAGTCCCTCAATGTTGTCCAGT  Raphanus sativus cv Early Scarlet Globe
EV565773       --> TCTGATCCACAATGGTAAACCGGTATGCGAGTCCCTCAATGTTGTCCAGT  Raphanus raphanistrum subsp. landra
EW726489       --> TCTGATCCACAATGGTGAACCGGTATGCGAGTCCCTCAATGTTGTCCAGT  Raphanus sativus cv Early Scarlet Globe
FD570237       --> TCTGATCCACAACGGTAAACCGGTATGCGAGTCCCTCAATGTTGTCCAGT  Raphanus sativus cv Early Scarlet Globe
EV537511       --> TCTGATCCACAACGGTAAACCGGTATGCGAGTCCCTCAATGTTGTCCAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538939       --> TCTGATCCACAACGGTAAACCGGTATGCGAGTCCCTCAATGTTGTCCAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW725861       --> TCTGATCCACAATGGTAAACCGGTATGCGAGTCCCTCAATGTTGTCCAGT  Raphanus sativus cv Early Scarlet Globe
EY905927       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY922474       --> TCTGATCCACAATGGTAAACCGGTATGCGAGTCCCTCAATGTTGTCCAGT  Raphanus raphanistrum subsp. landra
EY937607       --> TCTGATCCACAATGGTAAACCGGTATGCGAGTCCCTCAATGTTGTCCAGT  Raphanus sativus cv Early Scarlet Globe
FD564567       --> TCTGATCCACAACGGTAAACCGGTATGCGAGTCCCTCAATGTTGTCCAGT  Raphanus sativus var. oleiformis
FD570250       --> TCTGATCCACAATGGTAAGCCGGTATGCGAGTCCCTCAATGTTGTCCAGT  Raphanus sativus cv Early Scarlet Globe
FD945843       --> TCTGATCCACAATGGTAAACCGGTATGCGAGTCCCTCAATGTTGTCCAGT  Raphanus sativus cv Early Scarlet Globe
EX889992       --> TCTGATCCACAACGGTAAACCGGTATGCGAGTCCCTCAATGTTGTCCAGT  Raphanus sativus var. oleiformis
EY941343       --> TCTGATCCACAATGGTAAACCGGTATGCGAGTCCCTCAATGTTGTCCAGT  Raphanus sativus cv Early Scarlet Globe
EV565257       --> TCTGATGCACAATGGTAAACCGGTATGCGAGTCCCTCAATGTTGTCCAGT  Raphanus raphanistrum subsp. landra
EY915618       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               301    -    351
UN14310        --> ACGTGGACGAGGCTTGGTCTGACAAGAACCCATTCTTCCCTTCTGATCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD538325       <-- ACGTAGACGAGGCTTGGTCTGACAAGAACCCATTCTTCCCATCTGATCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV571046       <-- ACGTGGACGAGGCTTGGTCTGACAAGAACCCATTCTTCCCTTCTGATCCA  Raphanus raphanistrum subsp. landra
EW731015       <-- ACGTGGACGAGGTTTGGTCTGACAAGAACCCATTCTTCCCTTCTGATCCA  Raphanus sativus cv Early Scarlet Globe
FD975281       <-- ACGTGGACGAGGCTTGGTCTGACAAGAACCCATTCTTCCCTTCTGATCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571045       <-- ACGTGGACGAGGCTTGGTCTGACAAGAACCCATTCTTCCCTTCTGATCCA  Raphanus raphanistrum subsp. landra
EY902564       <-- ACGTGGACGAGGCTTGGTCTGACAAGAACCCATTCTTCCCTTCTGATCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD548008       <-- ACGTGGACGAGGCTTGGTCTGACAAGAACCCATTCTTCCCTTCTGATCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY936939       <-- ACGTGGACGAGGTTTGGTCTGACAAGAACCCATTCTTCCCTTCTGATCCA  Raphanus sativus cv Early Scarlet Globe
EY910444       <-- ACGTGGACGAGGCTTGGTCTGACAAGAACCCATTCTTCCCTTCTGATCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY902238       <-- ACGTGGACGAGGCTTGGTCTGACAAGAACCCATTCTTCCCATCTGATCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542842       <-- ...............................................cct  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946702       --> ACGTGGACGAGGTTTGGTCTGACAAGAACCCATTCTTCCCTTCTGATCCA  Raphanus sativus cv Early Scarlet Globe
EV565773       --> ACGTGGACGAGGCTTGGTCTGACAAGAACCCATTCTTCCCTTCTGATCCA  Raphanus raphanistrum subsp. landra
EW726489       --> ACGTGGACGAGGTTTGGTCTGACAAGAACCCATTCTTCCCTTCTGATCCA  Raphanus sativus cv Early Scarlet Globe
FD570237       --> ACGTGGACGAGGCTTGGTCTGACAAGAACCCATTCTTCCCTTCTGATCCT  Raphanus sativus cv Early Scarlet Globe
EV537511       --> ACGTGGACGAGGCTTGGTCTGACAAGAACCCATTCTTCCCATCTGATCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538939       --> ACGTGGACGAGGCTTGGTCTGACAAGAACCCATTCTTCCCATCTGATCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW725861       --> ACGTGGACGAGGTTTGGTCTGACAAGAACCCATTCTTCCCTTCTGATCCA  Raphanus sativus cv Early Scarlet Globe
EY905927       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY922474       --> ACGTGGACGAGGCTTGGTCTGACAAGAACCCATTCTTCCCTTCTGATCCA  Raphanus raphanistrum subsp. landra
EY937607       --> ACGTGGACGAGGTTTGGTCTGACAAGAACCCATTCTTCCCTTCTGATCCA  Raphanus sativus cv Early Scarlet Globe
FD564567       --> ACGTGGACGAGACTTGGTCTGACAAGAACCCATTCTTCCCTTCTGATCCT  Raphanus sativus var. oleiformis
FD570250       --> ACGTGGACGAGGTTTGGTCTGACAAGAACCCATTCTTCCCTTCTGATCCA  Raphanus sativus cv Early Scarlet Globe
FD945843       --> ACGTGGACGAGGTTTGGTCTGACACGAACCCATTCTTCCCTTCTGATCCA  Raphanus sativus cv Early Scarlet Globe
EX889992       --> ACGTGGACGAGGCTTGGTCTGACAAGAACCCATTCTTCCCTTCTGATCCT  Raphanus sativus var. oleiformis
EY941343       --> ACGTGGACGAGGTTTGGTCTGACAAGAACCCATTCTTCCCTTCTGATCCA  Raphanus sativus cv Early Scarlet Globe
EV565257       --> ACGTGGACGAGGCTTGGTCTGACAAGAACCCATTCTTCCCTTCTGATCCA  Raphanus raphanistrum subsp. landra
EY915618       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               351    -    401
UN14310        --> TACGGGAAAGCTCAGGCTAGGTTTTGGGCTGATTTCGTGGACAAGAAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD538325       <-- TACGGGAAAGCTCAGGCTAGGTTTTGGGCTGATTTCGTGGACAAGAAGTT
EV571046       <-- TACGGGAAAGCTCAGGCTAGGTTTTGGGCTGATTTCGTGGACAAGAAGTT
EW731015       <-- TACGGGAAAGCTCAGGCTAGGTTTTGGGCTGATTTCGTGGACAAGAAGTT
FD975281       <-- TACGGGAAAGCTCAGGCTAGGTTTTGGGCTGATTTCGTGGACAAGAAGTT
EV571045       <-- TACGGGAAAGCTCAGGCTAGGTTTTGGGCTGATTTCGTGGACAAGAAGTT
EY902564       <-- TACGGGAAAGCTCAGGCTAGGTTTTGGGCTGATTTCGTGGACAAGAAGTT
FD548008       <-- TACGGGAAAGCTCAGGCTAGGTTTTGGGCTGATTTCGTGGACAAGAAGTT
EY936939       <-- TACGGGAAAGCTCAGGCTAGGTTTTGGGCTGATTTCGTGGACAAGAAGTT
EY910444       <-- TACGGGAAAGCTCAGGCTAGGTTTTGGGCTGATTTCGTGGACAAGAAGTT
EY902238       <-- TACGGGAAAGCTCAGGCTAGGTTTTGGGCTGATTTCGTGGACAAGAAGTT
EV542842       <-- TACGGGAAAGCTCAGGCTAGGTTTTGGGCTGATTTCGTGGACAAGAAGTT
FD946702       --> TACGGGAAAGCTCAGGCTAGGTTTTGGGCTGATTTCGTGGACAAGAAGTT
EV565773       --> TACGGGAAAGCTCAGGCTAGGTTTTGGGCTGATTTCGTGGACAAGAAGTT
EW726489       --> TACGGGAAAGCTCAGGCTAGGTTTTGGGCTGATTTCGTGGACAAGAAGTT
FD570237       --> TACGGGAAAGCTCAGGCTAGGTTTTGGGCTGATTTCGTGGACAAGAAGTT
EV537511       --> TACGGGAAAGCTCAGGCTAGGTTTTGGGCTGATTTCGTGGACAAGAAGTT
EV538939       --> TACGGGAAAGCTCAGGCTAGGTTTTGGGCTGATTTCGTGGACAAGAAGTT
EW725861       --> TACGGGAAAGCTCAGGCTAGGTTTTGGGCTGATTTCGTGGACAAGAAGTT
EY905927       --> ..................................................
EY922474       --> TACGGGAAAGCTCAGGCTAGGTTTTGGGCTGATTTCGTGGACAAGAAGTT
EY937607       --> TACGGGAAAGCTCAGGCTAGGTTTTGGGCTGATTTCGTGGACAAGAAGTT
FD564567       --> TACGGGAAAGCTCAGGCTAGGTTTTGGGCTGATTTCGTGGACAAGAAGTT
FD570250       --> TACGGGAAAGCTCAGGCTAGGTTTTGGGCTGATTTCGTGGACAAGAAGTT
FD945843       --> TACGGGAAAGCTCAGGCTAGGTTTTGGGCTGATTTCGTGGACAAGAAGTT
EX889992       --> TACGGGAAAGCTCAGGCTAGGTTTTGGGCTGATTTCGTGGACAAGAAGTT
EY941343       --> TACGGGAAAGCTCAGGCTAGGTTTTGGGCTGATTTCGTGGACAAGAAGTT
EV565257       --> TACGGGAAAGCTCAGGCTAGGTTTTGGGCTGATTTCGTGGACAAGAAGTT
EY915618       --> ..................................................

               401    -    451
UN14310        --> TAGTGATGCCCAATTCAAGATATGGGGAAAGAAAGGTGAGGAACAAGCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD538325       <-- TAGTGATGCCCAATTCAGGATATGGGGAAAGAAAGGTGAGGAACAAGCAG
EV571046       <-- TAGTGATGCCCAATTCAAGATATGGGGAAAGAAAGGTGAGGAACAAGCAG
EW731015       <-- TAGTGATGCCCAATTCAAGATATGGGGAAAGAAAGGTGAGGAACAAGCAG
FD975281       <-- TAGTGATGCCCAATTCAAGATATGGGGAAAGAAAGGTGAGGAACAAGCAG
EV571045       <-- TAGTGATGCCCAATTCAAGATATGGGGAAAGAAAGGTGAGGAACAAGCAG
EY902564       <-- TAGTGATGCCCAATTCAAGATATGGGGAAAGAAAGGTGAGGAACAAGCAG
FD548008       <-- TAGTGATGCCCAATTCAAGATATGGGGAAAGAAAGGTGAGGAACAAGCAG
EY936939       <-- TAGTGATGCCCAATTCAAGATATGGGGAAAGAAAGGTGAGGAACAAGCAG
EY910444       <-- TAGTGATGCCCAATTCAAGATATGGGGAAAGAAAGGTAAGGAACAAGCAG
EY902238       <-- TAGTGATGCCCAATTCAAGATATGGGGAAAGAAAGGTGAGGAACAAGCAG
EV542842       <-- TAGTGATGCCCAATTCAAGATATGGGGAAAGAAAGGTGAGGAACAAGCAG
FD946702       --> TAGTGATGCCCAATTCAAGATATGGGGAAAGAAAGGTGAGGAACAAGCAG
EV565773       --> TAGTGATGCCCAATTCAAGATATGGGGAAAGAAAGGTGAGGAACAAGCAG
EW726489       --> TAGTGATGCCCAATTCAAGATATGGGGAAAGAAAGGTGAGGAACAAGCAG
FD570237       --> TTGTGATGCCCAATTCAAGATATGGGGAAAGAAAGGTGAGGAACAAGCAG
EV537511       --> TAGTGATGCCCAATTCAAGATATGGGGAAAGAAAGGTGAGGAACAAGCAG
EV538939       --> TAGTGATGCCCAATTCAAGATATGGGGAAAGAAAGGTGAGGAACAAGCAG
EW725861       --> TAGTGATGCCCAATTCAAGATATGGGGAAAGAAAGGTGAGGAACAAGCAG
EY905927       --> ..................................................
EY922474       --> TAGTGATGCCCAATTCAAGATATGGGGAAAGAAAGGTGAGGAACAGGCAG
EY937607       --> TAGTGATGCCCAATTCAAGATATGGGGAAAGAAAGGTGAGGAACAAGCAG
FD564567       --> TAGTGATGCCCAATTCAAGATATGGGGAAAGAAAGGTGAGGAACAAGCAG
FD570250       --> TAGTGATGCCCAATTCAAGATATGGGGAAAGAAAGGTGAGGAACAAGCAG
FD945843       --> TAGTGATGCCCAATTCAAGATATGGGGAAAGAAAGGTGAGGAACAAGCAG
EX889992       --> TAGTGATGCCCAATTCAAGATATGGGGAAAGAAAGGTGAGGAACAAGCAG
EY941343       --> TAGTGATGCCCAATTCAAGATATGGGGAAAGAAAGGTGAGGAACAAGCAG
EV565257       --> TAGTGATGCCCAATTCAAGATATGGG-AAAGAAAGGTGAGGAACAAGCAG
EY915618       --> ..................................................

               451    -    501
UN14310        --> CAGGGGTGAAGGAGTTTATTGAGGCAGTGAAGATTCTTGAAGCTGAACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD538325       <-- CAGGGGTGAAGGAGTTTATTGAGGCAGCGAAGATTCTCGAAGCTGAGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV571046       <-- CAGGGGTGAAGGAGTTTATTGAGGCAGTGAAGATTCTTGAAGCTGAACTT  Raphanus raphanistrum subsp. landra
EW731015       <-- CAGGGGTGAAGGAGTTTATTGAGGCAGTGAAGATTCTTGAAGCTGAACTT  Raphanus sativus cv Early Scarlet Globe
FD975281       <-- CAGGGGTGAAGGAGTTTATTGAGGCAGCGAAGATTCTCGAAGCTGAGCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571045       <-- CAGGGGTGAAGGAGTTTATTGAGGCAGTGAAGATTCTTGAAGCTGAACTT  Raphanus raphanistrum subsp. landra
EY902564       <-- CAGGGGCGAAGGAGTTTATTGAGGCAGTGAAGATTCTTGAAGCTGA---G  Raphanus raphanistrum subsp. raphanistrum (MS)
FD548008       <-- CAGGGGTGAAGGAGTTTATTGAGGCAGCGAAGATTCTCGAAGCTGAGCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY936939       <-- CAGGGGTGAAGGAGTTTATTGAGGCAGTGAAGATTCTTGAAGCTGAACTT  Raphanus sativus cv Early Scarlet Globe
EY910444       <-- CAGGGGTGAAGGAGTTTATTGAGGCAGCGAAGATTCTCGAAGCTGAGCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY902238       <-- CAGGGGTGAAGTAGTTTATTGAGGCAGCGAAGATTCTCGAAGCTGAGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542842       <-- CAGGGGTGAAGGAGTTTATTGAGGCAGGGAAGATTTTGGAAGCTGAGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946702       --> CAGGGGTGAAGGAGTTTATTGAGGCAGTGAAGATTCTTGAAGCTGAACTT  Raphanus sativus cv Early Scarlet Globe
EV565773       --> CAGGGGTGAAGGAGTTTATTGAGGCAGTGAAGATTCTTGAAGCTGAACTT  Raphanus raphanistrum subsp. landra
EW726489       --> CAGGGGTGAAGGAGTTTATTGAGGCAGTGAAGATTCTTGAAGCTGAACTT  Raphanus sativus cv Early Scarlet Globe
FD570237       --> CAGGGGTGAAGGAGTTTATTGAGGCAGTGAAGATTCTTGAAGCTGAGCTT  Raphanus sativus cv Early Scarlet Globe
EV537511       --> CAGGGGTGAAGGAGTTTATTGAGGCAGTGAAGATTCTTGAAGCTGAGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538939       --> CAGGGGTGAAGGAGTTTATTGAGGCAGCGAAGATTCTCGAAGCTGAGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW725861       --> CAGGGGTGAAGGAGTTTATTGAGGCAGTGAAGATTCTTGAAGCTGAACTT  Raphanus sativus cv Early Scarlet Globe
EY905927       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY922474       --> CAGGGGTGAAGGAGTTTATTGAGGCAGTGAAGATTCTTGAAGCTGAACTT  Raphanus raphanistrum subsp. landra
EY937607       --> CAGGGGTGAAGGAGTTTATTGAGGCAGTGAAGATTCTTGAAGCTGAACTT  Raphanus sativus cv Early Scarlet Globe
FD564567       --> CAGGGGTGAAGGAGTTTATTGAGGCAGTGAAGATTCTTGAAGCTGAGCTT  Raphanus sativus var. oleiformis
FD570250       --> CAGGGGTGAAGGAGTTTATTGAGGCAGTGAAGATTCTCGAAGCTGAACTT  Raphanus sativus cv Early Scarlet Globe
FD945843       --> CAGGGGTGAAGGAGTTTATTGAGGCAGTGAAGATTCTTGAAGCTGAACTT  Raphanus sativus cv Early Scarlet Globe
EX889992       --> CAGGGGT...........................................  Raphanus sativus var. oleiformis
EY941343       --> CAGGGGTGAAGGAGTTTATTGAGGCAGTGAAGATTCTTGAAGCTGAACTT  Raphanus sativus cv Early Scarlet Globe
EV565257       --> CAGGGGTGAAGGAGTTTATTGAGGCAGTGAAGATTCTTGAAGCTGAACTT  Raphanus raphanistrum subsp. landra
EY915618       --> .gGGGGTGAAGGAGTTTATTGAGGCAGCGAAGATTCTCGAAGCTGAGCTT  Raphanus raphanistrum subsp. raphanistrum (NY)

               501    -    551
UN14310        --> GGAGACAAACCTTACTTTGGTGGAGATACCTTTGGCTATGTAGACATTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD538325       <-- GGAGACAAACCTTACTTTGGTGGAGATACCTTTGGCTATGTAGACATTGC
EV571046       <-- GGAGACAAACCTTACTTTGGTGGAGATACCTTTGGCTATGTAGACATTGC
EW731015       <-- GGAGACAAACCTTACTTTGGTGGAGATACCTTTGGCTATGTAGACATTGC
FD975281       <-- GGAGACAAACCTTACTTTGGTGGAGATACCTTTGGCTATGTAGACATTGC
EV571045       <-- GGAGACAAACCTTACTTTGGTGGAGATACCTTTGGCTATGTAGACATTGC
EY902564       <-- CGAGACAAACCTTACTTTGGTGGAGATACATTTGGCTATGTAGACATTGC
FD548008       <-- GGAGACAAACCTTACTTTGGTGGAGATACCTTTGGCTATGTAGACATTGC
EY936939       <-- GGAGACAAACCTTACTTTGGTGGAGATACCTTTGGCTATGTAGACATTGC
EY910444       <-- GGAGACAAACCTTACTTTGGTGGAGATACCTTTGGCTATGTAGACATTGC
EY902238       <-- GGAGACAAACCTTACTTTGGTGGAGATACCTTTGGCTATGTAGACATTGC
EV542842       <-- GGAGACAAACCTTACTTTGGTGGAGATACCTTTGGCTATGTAGACATTGC
FD946702       --> GGAGACAAACCTTACTTTGGTGGAGATACCTTTGGCTATGTAGACATTGC
EV565773       --> GGAGACAAACCTTACTTTGGTGGAGATACCTTTGGCTATGTAGACATTGC
EW726489       --> GGAGACAAACCTTACTTTGGTGGAGATACCTTTGGCTATGTAGACATTGC
FD570237       --> GGAGACAAACCTTACTTTGGTGGAGATACCTTTGGCTATGTAGACATTTC
EV537511       --> GGAGACAAACCTTACTTTGGTGGAGATACATTTGGCTATGTAGACATTGC
EV538939       --> GGAGACAAACCTTACTTTGGTGGAGATACCTTTGGCTATGTAGACATTGC
EW725861       --> GGAGACAAACCTTACTTTGGTGGAGATACCTTTGGCTATGTAGACATTGC
EY905927       --> ..................................................
EY922474       --> GGAGACAAACCTTACTTTGGTGGAGATACCTTTGGCTATGTAGACATTGC
EY937607       --> GGAGACAAACCTTACTTTGGTGGAGATACCTTTGGCTATGTAGACATTGC
FD564567       --> GGAGACAAACCTTACTTTGGTGGAGATACCTTTGGCTATGTAGACATTTC
FD570250       --> GGAGACAAACCTTACTTTGGTGGAGATACCTTTGGCTATGTAGACATTGC
FD945843       --> GGAGACAAACCTTACTTTGGTGGAGATACCTTTGGCTATGTAGACATTGC
EX889992       --> ..................................................
EY941343       --> GGAGACAAACCTTACTTTGGTGGAGATACCTTTGGCTATGTAGACATTGC
EV565257       --> GGAGACAAACCTTACTTTGGTGGAGATACCTTTGGCTATGTAGACATTGC
EY915618       --> GGAGACAAACCTTACTTTGGTGGAGATACCTTTGGCTATGTAGACATTGC

               551    -    601
UN14310        --> ACTGATTACATTCTACAGTTGGTTCGGAGCATATGAGAAGTTTGGTAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD538325       <-- ACTGATTACATTCTACAGTTGGTTCGGAGCATATGAGAAGTTTGGTAACT
EV571046       <-- ACTGATTACATTCTACAGTTGGTTCGGAGCATATGAGAAGTTTGGTAACT
EW731015       <-- ACTGATTACATTCTACAGTTGGTTCGGAGCATATGAGAAGTTTGATAACT
FD975281       <-- ACTGATTACATTCTACATTTGGTTCGGAGCATATGAGAAGTTTGGTAACT
EV571045       <-- ACTGATTACATTCTACAGTTGGTTCGGAGCATATGAGAAGTTTGGTAACT
EY902564       <-- ACTGATTACATTCTACAGTTGGTTCGGAGCATATGAGAAGTTTGGTAACT
FD548008       <-- ACTGATTACATTCTACAGTTGGTTCGGAGCATATGAGAAGTTTGGTAACT
EY936939       <-- ACTGATTACATTCTACAGTTGGTTCGGAGCATATGAGAAGTTTGGTAACT
EY910444       <-- ACTGATTACATTCTACAGTTGGTTCGGAGCATATGAGAAGTTTGGTAACT
EY902238       <-- ACTGATTACATTCTACAGTTGGTTCGGAGCATATGAGAAGTTTGGTAACT
EV542842       <-- ACTGATTACATTTTACAGTTGGTTCGGAGCATATGAGAAGTTTGGTAACT
FD946702       --> ACTGATTACATTCTACAGTTGGTTCGGAGCATATGAGAAGTTTGGTAACT
EV565773       --> ACTGATTACATTCTACAGTTGGTTCGGAGCATATGAGAAGTTTGGTAACT
EW726489       --> ACTGATTACATTCTACAGTTGGTTCGGAGCATATGAGAAGTTTGGTAACT
FD570237       --> ACTGATTACATTCTACAGTTGGTTCGGAGCATATGAGAAGTTTGGTAACT
EV537511       --> ACTGATTACATTCTACAGTTGGTTCGGAGCATATGAGAAGTTTGGTAACT
EV538939       --> ACTGATTACATTCTACAGTTGGTTCGGAGCATATGAGAAGTTTGGTAACT
EW725861       --> ACTGATTACATTCTACAGTTGGTTCGGAGCATATGAGAAGTTTGATAACT
EY905927       --> ..................................................
EY922474       --> ACTGATTACATTCTACAGTTGGTTCGGAGCATATGAGAAGTTTGGTAACT
EY937607       --> ACTGATTATATTCTACAGTTGGTTCGGAGCATATGAGAAGTTTGGTAACT
FD564567       --> ACTGATTACATTCTACAGTTGGTTCGGAGCATATGAGAAGTTTGGTAACT
FD570250       --> ACTGATTACATTCTACAGTTGGTTCGGAGCATATGAGAAGTTTGGTAACT
FD945843       --> ACTGATTACATTCTACAGTTGGTTCGGAGCATATGAGAAGTTTGGTAACT
EX889992       --> ..................................................
EY941343       --> ACTGATTACATTCTACAGTTGGTTCGGAGCATATGAGAAGTTTGGTAACT
EV565257       --> ACTGATTACATTCTACAGTTGGTTCGGAGCATATGAGAAGTTTGGTAACT
EY915618       --> ACTGATTACATTCTACAGTTGGTTCGGAGCATATGAGAAGTTTGGTAACT

               601    -    651
UN14310        --> TCAGCATCGAGGCAGAGAGTCCAAAACTGATTGCTTGGGCTAAGAGGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD538325       <-- TCAGCATCGAGGCAGAGAGTCCAAAACTGATTGCTTGGGCTAAGAGGTGT
EV571046       <-- TCAGCATCGAGGCAGAGAGTCCAAAACTGATTGCTTGGGCTAAGAGGTGT
EW731015       <-- TCAGCATCGAGGCAGAGAGTCCAAAACTGATTGCTTGGGCTAAGAGGTGT
FD975281       <-- TCAGCATCGAGGCAGAGAGTCCAAAACTGATTGCTTGGGCTAAGAGGTGT
EV571045       <-- TCAGCATCGAGGCAGAGAGTCCAAAACTGATTGCTTGGGCTAAGAGGTGT
EY902564       <-- TCAGCATCGAGGCAGAGAGTCCAAAACTGATTGCTTGGGCTAAGAGGTGT
FD548008       <-- TCAGCATCGAGGCAGAGAGTCCAAAACTGATTGCTTGGGCTAAGAGGTGT
EY936939       <-- TCAGCATCGAGGCAGAGAGTCCAAAACTGATTGCTTGGGCTAAGAGGTGT
EY910444       <-- TCAGCATCGAGGCAGAGAGTCCAAAACTGATTGCTTGGGCTAAGAGGTGT
EY902238       <-- TCAGCATCGAGGCAGAGAGTCCAAAACTGATTGCTTGGGCTAAGAGGTGT
EV542842       <-- TCAGCATCGAGGCAGAGAGTCCAAAACTGATTGCTTGGGTTAAGAGGTGT
FD946702       --> TCAGCATCGAGGCAGAGAGTCCAAAACTGATTGCTTGGGC..........
EV565773       --> TCAGCATCGAGGCAGAGAGTCCAAAACTGATTGCTTGGGCTAAGAGGTGT
EW726489       --> TCAGCATCGAGGCAGAGAGTCCAAAACTGATTGCTTGG............
FD570237       --> TCAGCATCGAGGCAGAGAGTCCAAAACTGATTGCTTGGGCTAAGAGGTGT
EV537511       --> TCAGCATCGAGGCAGAGAGTCCAAAACTGATTGCTTGGGCTAAGAG-TGT
EV538939       --> TCAGCATCGAGGCAGAGAGTCCAAAACTGATTGCTTGGGCTAAGAGGTGT
EW725861       --> TCAGCATCGAGGCAGAGAGTCCAAAACTGATTGCTTGGGCTAAGAGGTGT
EY905927       --> ..................................................
EY922474       --> TCAGCATCGAGGCAGAGAGTCCAAAACTGATTGCTTGGGCTA........
EY937607       --> TCAGCATCGAGGCAGAGAGTCCAAAACCGATTGCTTGGGTTAAGAG-TGT
FD564567       --> TCAGCATCG--GCAGAGAGTCCAAAACTGATTGCTTGGGCTAAGAGGTGT
FD570250       --> TCAGCATCGAGGCAGAGAGTCCAAAACTGATTGCTTGGGCTAAGAGGTGT
FD945843       --> TCAGCATCGAGGCAGAGAGTCCAAAACTGATTGCTTGGGCTAAGAGGTGT
EX889992       --> ..................................................
EY941343       --> TCAGCATCGAGGCAGAGAGTCCAAAACTGATTGCTTGGGCTAAGAG-TGT
EV565257       --> TCAGCATCGAGGCAGAGAGTCCAAAACTGATTGCTTGGGCTAAGAGGTGT
EY915618       --> TCAGCATCGAGGCAGAGAGTCCAAAACTGATTGCTTGGGCTAAGAGGTGT

               651    -    701
UN14310        --> ATGCAGAAAGAGAGCGTGTCTAAGTCTCTCCCAGACCAAGAGAAAATTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD538325       <-- ATGCAGAAAGAGAGCGTGTCTAAGTCTCTCCCTGACCAAGAGAAAATTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV571046       <-- ATGCAGAAAGAGAGCGTGTCTAAGTCTCTCCCAGACCAAGAGAAAATTGT  Raphanus raphanistrum subsp. landra
EW731015       <-- ATGCAGAAAGAGAGCGTGTCTAAGTCTCTCCCAGACCAAGAGAAAATTGT  Raphanus sativus cv Early Scarlet Globe
FD975281       <-- ATGCAGAAAGAGAGCGTGTCTAAGTCTCTCCCTGACCAAGAGAAAATTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571045       <-- ATGCAGAAAGAGAGCGTGTCTAAGTCTCTCCCAGACCAAGAGAAAATTGT  Raphanus raphanistrum subsp. landra
EY902564       <-- ATGCAGAAAGAGAGCGTGTTTAAGTCTCTCCCTGACCAAGAGAAAATTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD548008       <-- ATGCAGAAAGAGAGCGTGTCTAAGTCTCTCCCTGACCAAGAGAAAATTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY936939       <-- ATGCAGAAAGAGAGCGTGTCTAAGTCTCTCCCAGACCAAGAGAAAATTGT  Raphanus sativus cv Early Scarlet Globe
EY910444       <-- ATGCAGAAAGAGAGCGTGTCTAAGTCTCTCCCTGACCAAGAGAAAATTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY902238       <-- ATGCAGAAAGAGAGCGTGTCTAAGTCTCTCCCTGACCAAGAGAAAATTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542842       <-- ATGCAGAAAGGGAGCGTGTTTAAG..........................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946702       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV565773       --> ATGCAGAAAGAGAGCGTGTCTAAGTCTCTCCCAGACCAAGAGAAAATTGT  Raphanus raphanistrum subsp. landra
EW726489       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD570237       --> ATGCAGAAAGAGAGCGTGTCTAAGTCTC-CCCA--CCAAGAGAAA-TTGT  Raphanus sativus cv Early Scarlet Globe
EV537511       --> ATGCAGAAAGAGAGCGTGTCTAAGTCTCTCCCTGACCAAGAGAAAATTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538939       --> ATGCAGAAAGGGAGCGTGTCTAAGTCTCTCCCTGACCAAGAGAAAATTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW725861       --> ATGCAGAAAGAGAGCGTGTCTAAGTCTCTCCCAGAC-AAGAGAAAATTGT  Raphanus sativus cv Early Scarlet Globe
EY905927       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY922474       --> ..................................................  Raphanus raphanistrum subsp. landra
EY937607       --> ATGCAGAAAGAGAGCGTGTCTAA...........................  Raphanus sativus cv Early Scarlet Globe
FD564567       --> ATGCAGAAAGAGAACGTGTCTAAGTCTCTCCCTGAC-AAGAGAAAATTGT  Raphanus sativus var. oleiformis
FD570250       --> ATGCAGAAAGAGAGCGTGTCTAAGTCTCTCCCAGACCAAGAGAAA-TTGT  Raphanus sativus cv Early Scarlet Globe
FD945843       --> ATGCAGAAAGAGAGCGTGTCTAAGTCTCTCCCAGACCAAGAGAAAATTGT  Raphanus sativus cv Early Scarlet Globe
EX889992       --> ..................................................  Raphanus sativus var. oleiformis
EY941343       --> ATGCAGAAAGAGAGCGTGTCTAAGTCTCTCC-AGACC.............  Raphanus sativus cv Early Scarlet Globe
EV565257       --> ATGCAGAAAGAGAGCGTGTCTAAGTCTCTCCCAGACCAAGAGAAAATTGT  Raphanus raphanistrum subsp. landra
EY915618       --> ATGCAGAAAGAGAGCGTGTCTAAGTCTCTCCCTGACCAAGAGAAAATTGT  Raphanus raphanistrum subsp. raphanistrum (NY)

               701    -    751
UN14310        --> TGCGTACGCCGCTGAGTTTAGGAAGAATAATCTCTGATACTG-AATATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD538325       <-- TGCGTACGCCGCTGAGTTTAGGAAGAATAATCTCTGATACTGCTGAATAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV571046       <-- TGCGTACGCCGCTGAGTTTAGGAAGAATAATCTCTGATACTG-AAT--AA  Raphanus raphanistrum subsp. landra
EW731015       <-- TGCGTACGCCGCTGAGTTTAGGAAGAATAATCTCTGATACTG-AAT--AA  Raphanus sativus cv Early Scarlet Globe
FD975281       <-- TGCGTACGCCGCTGAGTTTAGGAAGAATAATCTCTGATACTGCTGAATAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571045       <-- TGCGTACGCCGCTGAGTTTAGGAAGAATAATCTCTGATACTG-AAT--AA  Raphanus raphanistrum subsp. landra
EY902564       <-- TGCGTACGCCGCTGAGTTTAGGAAGAATAATCTCTGATACTG-AAT--AA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD548008       <-- TGCGTACGCCGCTGAGTTTAGGAAGAATAATCTCTGATACTGCTGAATAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY936939       <-- TGCGTACGCCGCTGAGTTTAGGAAGAATAATCTCTGATACTG-AAT--AA  Raphanus sativus cv Early Scarlet Globe
EY910444       <-- TGCGTACGCCGCTGAGTTTAGGAAGAATAATCTCTGATACTGCTGAATAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY902238       <-- TGCGTACGCCGCTGAGTTTAGGAAGAATAATCTCTGATACTGTTGAATAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542842       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946702       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV565773       --> TGCGTACGCCGCTGAGTTTA..............................  Raphanus raphanistrum subsp. landra
EW726489       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD570237       --> TGCGTACGCCGCTGAGTTTAGaga..........................  Raphanus sativus cv Early Scarlet Globe
EV537511       --> TGCGTACGCCGCTGAGTTTAGaag..........................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538939       --> TGCGTACGTCGCTGAGTTTAGGAAGAATAATCTCTGATACTGCTGAATAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW725861       --> TGCGTACGCCGCTGAGTTTAG-AAGA-TA-TCTCTGATACTG-AA---AA  Raphanus sativus cv Early Scarlet Globe
EY905927       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY922474       --> ..................................................  Raphanus raphanistrum subsp. landra
EY937607       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD564567       --> TGCGTACGCCGCTGAGT.................................  Raphanus sativus var. oleiformis
FD570250       --> TGCGTACGCCGCTGAGTTTAGaa...........................  Raphanus sativus cv Early Scarlet Globe
FD945843       --> TGCGTACGCCGCTGAGT.................................  Raphanus sativus cv Early Scarlet Globe
EX889992       --> ..................................................  Raphanus sativus var. oleiformis
EY941343       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV565257       --> TGCGTACGCCGCTGAGTTTAGGAAGAATAATCTCTGATACTG-AATA--A  Raphanus raphanistrum subsp. landra
EY915618       --> TGCGTACGCCGCTGAGTTTAGGAAGAATAATCTCTGATACTGCTGAATAA  Raphanus raphanistrum subsp. raphanistrum (NY)

               751    -    801
UN14310        --> AACCTTGTGTTGTGTCTTCTGTTTCCGATGATGGTGTGCTCTGCCTTCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD538325       <-- AACCTTGTGTTGTGTCTTCTGTTTCCGATGATGGTGTGCTCTGCCTTCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV571046       <-- AACCTTGTGTTGTGTCTCCTGTTTCTGATGATGCTGTGCTCTGCTTTCGT  Raphanus raphanistrum subsp. landra
EW731015       <-- AACCTTGTGTTGTGTCTTCTGTTTCTGATGATGCTGTGCTCTGCTTTCGT  Raphanus sativus cv Early Scarlet Globe
FD975281       <-- AACCTTGTGTTGTGTCTTCTGTTTCCGATGATGGTGTGCTCTGCCTTCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571045       <-- AACCTTGTGTTGTGTCTCCTGTTTCTGATGATGCTGTGCTCTGCTTTCGT  Raphanus raphanistrum subsp. landra
EY902564       <-- GACCTTGTGTTGTGTCTTCTGTTTCCGATGATGGTGTGCTCTGCCTTCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD548008       <-- AACCTTGTGTTGTGTCTTCTGTTTCCGATGATGGTGTGCTCTGCCTTCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY936939       <-- GACCTTGTGTTGTGTCTTCTGTTTCTGATGATGCTGTGCTCTGCTTTCGT  Raphanus sativus cv Early Scarlet Globe
EY910444       <-- AACCTTGTGTTGTGTCTTCTGTTTCCGATGATGGTGTGCTCTGCTTTCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY902238       <-- AACCTTGTGTTGTGTTTTCTGTTTCCGATGATGGTGTGCTCTGCCTTCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542842       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946702       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV565773       --> ..................................................  Raphanus raphanistrum subsp. landra
EW726489       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD570237       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV537511       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538939       --> AACCTTGTGTTGTGTCTTCTGTTTCCGATGATGGTGTGCTCTGCCTTCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW725861       --> AACCTTGTGTTGTGTCT-CTGTT-CTGATGATGCTGTG............  Raphanus sativus cv Early Scarlet Globe
EY905927       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY922474       --> ..................................................  Raphanus raphanistrum subsp. landra
EY937607       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD564567       --> ..................................................  Raphanus sativus var. oleiformis
FD570250       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD945843       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX889992       --> ..................................................  Raphanus sativus var. oleiformis
EY941343       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV565257       --> AACCTTGTGTTGTGTCTTCTGTTTCTGATGATGCTGTGCTCTGCTTTCGT  Raphanus raphanistrum subsp. landra
EY915618       --> AACCTTGTGTTGTGTCTTCTGTTTCCGATGATGGTGTGCTCTGCCTTCGT  Raphanus raphanistrum subsp. raphanistrum (NY)

               801    -    851
UN14310        --> TCTCTTTTAGCTTTGGTTTCTGTGTGTTTCCTAATAATACGTGAGGGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD538325       <-- TCTCTTTTAGCTTTGGTTTCTGTGTGTTTCCTAATAATACGTGAGGGCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV571046       <-- TCTCTTTTAGCTTTGGTTTTTGTGTGTTTCCTAATAATACGTGAGGGCAA  Raphanus raphanistrum subsp. landra
EW731015       <-- TCTCTTTTAGCTTTGGTTTTTGTGTGTTTCCTAATAATACGTGAGGGCAA  Raphanus sativus cv Early Scarlet Globe
FD975281       <-- TCTCTTTTAGCTT-GGTTTCTGTGTGTTTCCTAATAATACGTGAGGGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV571045       <-- TCTCTTTTAGCTTTGGTTTTTGTGTGTTTCCTAATAATACGTGAGGGCAA  Raphanus raphanistrum subsp. landra
EY902564       <-- TCTCTTTTAGCTTTGGTTTCTGTGTGTTTCCTAATAATACGTGAGGGCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD548008       <-- TCTCTTTTAGCTTTGGTTTCTGTGTGTTTCCTAATAATACGTGAGGGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY936939       <-- TCTCTTTTAGCTTTGGTTTTTGTGTGTTTCCTAATAATACGTGAGGGCAA  Raphanus sativus cv Early Scarlet Globe
EY910444       <-- TCTCTTTTAGCTTTGGTTTCTGTGTGTTTCCTAATAATACGTGAGGGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY902238       <-- TCTCTTTTAGCTTTGGTTTCTGTGTGTTTCCTAATAATACGTGAGGACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542842       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946702       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV565773       --> ..................................................  Raphanus raphanistrum subsp. landra
EW726489       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD570237       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV537511       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538939       --> TCTCTTTTAGCTTTGGTT................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW725861       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY905927       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY922474       --> ..................................................  Raphanus raphanistrum subsp. landra
EY937607       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD564567       --> ..................................................  Raphanus sativus var. oleiformis
FD570250       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD945843       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX889992       --> ..................................................  Raphanus sativus var. oleiformis
EY941343       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV565257       --> TCTCTTTTAGCTTTGGTTTTTGTGTGTTTCCTAATAATACGTGAGGGCAA  Raphanus raphanistrum subsp. landra
EY915618       --> TCTCTTTTAGCTTTGGTTTCTGTGTGTTTCCTAATAATACGTGAGGGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)

               851    -    901
UN14310        --> GCGTCAGTGTTTGTGTGGTGGTTTGTATTGGATCCTAAGTAGTGCATTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD538325       <-- GCGTCAGTGTTTGTGTGGTGGTTTGTATTGGATCCTAAGTAGTGCATTTT
EV571046       <-- GCGTCAGTGTTTGTGTGGTGGTTTGTATTGGATCCTAAGTAGTGCATTTT
EW731015       <-- GCGTCAGTGTTTGTGTGGTGGTTTGTATTGGATCCTAAGTAGTGCATTTT
FD975281       <-- GCGTCAGTGTTTGTGTGGTGGTTTGTATTGGATCCTAAGTAGTGCATTTT
EV571045       <-- GCGTCAGTGTTTGTGTGGTGGTTTGTATTGGATCCTAAGTAGTGCATTTT
EY902564       <-- GCGTCAGTGTTTGTGTGGTGGTTTGTATTGGATCCTAAGTAGTGCATTTT
FD548008       <-- GCGTCAGTGTTTGTGTGGTGGTTTGT........................
EY936939       <-- GCGTTAGTGTTTGTGTGGTGGTTTGTATTGGATCCTAAGTAGTGCATTTT
EY910444       <-- GCGTCAGTGTTTGTGTGGTGGTTTGTATTGGATCCTAAGTAGTGCATTTT
EY902238       <-- GCGTCAGTGTTTGTGTGGTGGTTTGTATTGGATCCTAAGTAGTGCATTTT
EV542842       <-- ..................................................
FD946702       --> ..................................................
EV565773       --> ..................................................
EW726489       --> ..................................................
FD570237       --> ..................................................
EV537511       --> ..................................................
EV538939       --> ..................................................
EW725861       --> ..................................................
EY905927       --> ..................................................
EY922474       --> ..................................................
EY937607       --> ..................................................
FD564567       --> ..................................................
FD570250       --> ..................................................
FD945843       --> ..................................................
EX889992       --> ..................................................
EY941343       --> ..................................................
EV565257       --> GCGTCAGTGTTTGTGTGGTGGTTTGTATTGGATCCTAAGTAGTGCATTTT
EY915618       --> GCGTCAGTGTTTGTGTGGTGGTTTGTATTGGATCCTAAGTAGTGCATTTT

               901    -    951
UN14310        --> AAAATAAAGTTTGTTTCCT
                   ~~~~~~~~~~~~~~~~~~~
FD538325       <-- AAAATAAAGTTTGTTTCC.
EV571046       <-- AAAATAAAGTTTGTTTCC.
EW731015       <-- AAAAg..............
FD975281       <-- AAAATAAAGTTTGTTTCC.
EV571045       <-- AAAATAAAGTTTGTTTCC.
EY902564       <-- AAAATAAAGTTTGTTTCC.
FD548008       <-- ...................
EY936939       <-- AAAATAAAGTTTGTTTCC.
EY910444       <-- AAAATAAAGTTTGTTTCC.
EY902238       <-- AAAATAAAGTTTGTTTCCT
EV542842       <-- ...................
FD946702       --> ...................
EV565773       --> ...................
EW726489       --> ...................
FD570237       --> ...................
EV537511       --> ...................
EV538939       --> ...................
EW725861       --> ...................
EY905927       --> ...................
EY922474       --> ...................
EY937607       --> ...................
FD564567       --> ...................
FD570250       --> ...................
FD945843       --> ...................
EX889992       --> ...................
EY941343       --> ...................
EV565257       --> AAAATAAAGTTTGTTT...
EY915618       --> AAAATAAAGTTTGTTTCC.