1      -     51
UN14333        --> ATCAGGATGGGGCCTTGAAATCTCTGAGCTGAAGAAGCAACTTGAGGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY446152       <-- ..................................................
FD958545       <-- ..................................................
EW737242       <-- ..................................................
FD983041       <-- ..................................................
FY453862       --> ATCAGGATGGGGCCTTGAAATCTCTGAGCTGAAGAAGCAACTTGAGGAGG
FY454568       --> ATCAGGATGGGGCCTTGAAATCTCTGAGCTGAAGAAGCAACTTGAGGAGG
FD961872       --> ..................................................
FD986877       --> ..................................................
EW732824       --> ..................................................
EY941499       --> ..................................................
FD532968       --> ..................................................

               51     -    101
UN14333        --> CTAGGTCGAAGGGCATCACTGTAAGAGCCTTGGCGGTCATCAACCCTGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY446152       <-- ..................................................
FD958545       <-- ..................................................
EW737242       <-- ..................................................
FD983041       <-- ..................................................
FY453862       --> CTAGGTCGAAGGGCATCACTGTAAGAGCCTTGGCGGTCATCAACCCTGGC
FY454568       --> CTAGGTCGAAGGGCATCACTGTAAGAGCCTTGGCGGTCATCAACCCTGGC
FD961872       --> ........................................gAACCCTGGC
FD986877       --> ..................................................
EW732824       --> ..................................................
EY941499       --> ..................................................
FD532968       --> ..................................................

               101    -    151
UN14333        --> AACCCGACAGGACAGGTTCTTGCGGAAGAAAACCAGCGTGAGATTGTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY446152       <-- ..................................................
FD958545       <-- ..................................................
EW737242       <-- ..................................................
FD983041       <-- ..................................................
FY453862       --> AACCCGACAGGACAGGTTCTTGCGGAAGAAAACCAGCGTGAGATTGTTGA
FY454568       --> AACCCGACAGGACAGGTTCTTGCGGAAGAAAACCAGCGTGAGATTGTTGA
FD961872       --> AACCCGACAGGACAGGTTCTTGCGGAAGAAAACCAGCGTGAGATTGTTGA
FD986877       --> ..................................................
EW732824       --> ..................................................
EY941499       --> ..................................................
FD532968       --> ..................................................

               151    -    201
UN14333        --> TTTCTGTAAGCAAGAGGGATTAGTTCTTTTAGCGGACGAGGTTTATCAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY446152       <-- ..................................................
FD958545       <-- ..................................................
EW737242       <-- ..................................................
FD983041       <-- ..................................................
FY453862       --> TTTCTGTAAGCAAGAGGGATTAGTTCTTTTAGCGGACGAGGTTTATCAGG
FY454568       --> TTTCTGTAAGCAAGAGGGATTAGTTCTTTTAGCGGACGAGGTTTATCAGG
FD961872       --> TTTTTGTAAGAAAGAGGGATTAGTTCTTTTAGCGGACGAGGTTTATCAGG
FD986877       --> ...............................GCGGACGAGGTTTATCAGG
EW732824       --> ..................................................
EY941499       --> ..................................................
FD532968       --> ..................................................

               201    -    251
UN14333        --> AAAATGTTTACGTCCCTGACAAAAAGTTCCACTCTTTCAAGAAAGTAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY446152       <-- ..................................................
FD958545       <-- ..................................................
EW737242       <-- ..................................................
FD983041       <-- ..................................................
FY453862       --> AAAATGTTTACGTCCCTGACAAAAAGTTCCACTCTTTCAAGAAAGTAGCC
FY454568       --> AAAATGTTTACGTCCCTGACAAAAAGTTCCACTCTTTCAAGAAAGTAGCC
FD961872       --> AAAATGTTTACGCCCCTGACAAAAAGTTCCACTCTTTCAAGAAAGTAGCC
FD986877       --> AAAATGTGTACGTCCCTGACAAAAAGTTCCACTCTTTCAAGAAAGTAGCC
EW732824       --> ..................................................
EY941499       --> ..................................................
FD532968       --> ..................................................

               251    -    301
UN14333        --> CGGTCTATGGGCTACGGTGAGAAGGATATCTGCTTAGTCTCATTCCAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY446152       <-- ......ATGGGCTACGGTGAGAAGGATATCTGCTTAGTCTCATTCCAGTC
FD958545       <-- ..................................................
EW737242       <-- ..................................................
FD983041       <-- ..................................................
FY453862       --> CGGTCTATGGGCTACGGTGAGAAGGATATCTGCTTAGTCTCATTCCAGTC
FY454568       --> CGGTCTATGGGCTACGGTGAGAAGGATATCTGCTTAGTCTCATTCCAGTC
FD961872       --> CGGTCTATGGGCTACGGTGAGAAGGATATCTGCTTAGTATCGTTCCAGTC
FD986877       --> CGGTCCATGGGCTACGGTGAGAAGGATATCTGCTTAGTCTCGTTCCAGTC
EW732824       --> ..................................................
EY941499       --> ..................................................
FD532968       --> ..................................................

               301    -    351
UN14333        --> TATCTCCAAAGGGTACTACGGAGAGTGTGGGAAGAGAGGTGGTTACATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY446152       <-- TATCTCCAAAGGGTACTACGGAGAGTGTGGGAAGAGAGGTGGTTACATGG
FD958545       <-- ..................................................
EW737242       <-- ..................................................
FD983041       <-- ..................................................
FY453862       --> TATCTCCAAAGGGTACTACGGAGAGTGTGGGAAGAGAGGTGGTTACATGG
FY454568       --> TATCTCCAAAGGGTACTACGGAGAGTGTGGGAAGAGAGGTGGTTACATGG
FD961872       --> TATCTCCAAAGGTTACTACGGAGAGTGTGGGAAGAGAGGTGGTTACATGG
FD986877       --> TATCTCCAAAGGTTACTACGGAGAGTGTGGGAAGAGAGGTGGTTACATGG
EW732824       --> ..................................................
EY941499       --> ..................................................
FD532968       --> ..................................................

               351    -    401
UN14333        --> AAGTGACTGGATTCACCTCTGATGTAAGAGAACAGATATACAAACTGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY446152       <-- AAGTGACTGGATTCACCTCTGATGTAAGAGAACAGATATACAAACTGGCT
FD958545       <-- ...................TGACGTAAGAGAACAGATATACAAACTGGCT
EW737242       <-- ..................................................
FD983041       <-- ..................................................
FY453862       --> AAGTGACTGGATTCACCTCTGATGTAAGAGAACAGATATACAAACTGGCT
FY454568       --> AAGTGACTGGATTCACCTCTGATGTAAGAGAACAGATATACAAACTGGCT
FD961872       --> AGGTGACTGGATTCACTTCTGACGTAAGAGAACAGATATACAAACTGGCT
FD986877       --> AGGTGACGGGATTCACCTCTGATGTAAGAGAACAGATATACAAACTGGCT
EW732824       --> ..................................................
EY941499       --> ..................................................
FD532968       --> ..................................................

               401    -    451
UN14333        --> TCTGTGAATCTTTGCTCC-AACATCTCTGGTCAAATTTTGGCCAGCCTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY446152       <-- TCTGTGAATCTTTGCTCC-AACATCTCTGGACAAATTTTGGCCAGCCTAG  Raphanus sativus cv GSK3-1
FD958545       <-- TCTGTAAACCTTTGCTCCCAACATCTCTGGTCAAATTCTGGCCAGCCTCG  Raphanus raphanistrum subsp. maritimus
EW737242       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD983041       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY453862       --> TCTGTGAATCTTTGCTCC-AACATCTCTGGACAAATTTTGGCCAGCCTAG  Raphanus sativus cv GSK3-1
FY454568       --> TCTGTGAATCTTTGCTCC-AACATCTCTGGACAAATTTTGGCCAGCCTAG  Raphanus sativus cv GSK3-1
FD961872       --> TCTGTAAACCTTTGCTCC-AACATCTCTGGTCAAATTCTGGCCAGCCTCG  Raphanus raphanistrum subsp. maritimus
FD986877       --> TCTGTGAATCTTTGCTCC-AACATCTCTGGTCAAATTCTGGCCAGCCTAG  Raphanus raphanistrum subsp. landra
EW732824       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY941499       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD532968       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               451    -    501
UN14333        --> TCATGAGCCCTCCCAAGCCTGGTGACGACTCCTATGATTCATACATAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY446152       <-- TCATGAGCCCTCCCAAGCCTGGTGACGACTCCTATGATTCATACATAGCA
FD958545       <-- TCATGAGCCCTCCCAAGCCTGGTGACGACTCCTATGATTCATACATAGCA
EW737242       <-- ..................................................
FD983041       <-- ..................................................
FY453862       --> TCATGAGCCCTCCCAAGCCTGGTGACGACTCCTATGATTCATACATAGCA
FY454568       --> TCATGAGCCCTCCCAAGCCTGGTGACGACTCCTATGATTCATACATAGCA
FD961872       --> TCATGAGCCCTCCCAAGCCTGGTGACGACTCCTATGATTCATACATAGCA
FD986877       --> TCATGAGCCCTCCCAAGCCTGGTGACGACTCCTATGATTCATACATAGCA
EW732824       --> ..................................................
EY941499       --> ..................................................
FD532968       --> ..................................................

               501    -    551
UN14333        --> GAGAAAGAGGGAATCCTCTCGTCTTTAGCAAAACGTGCAAAGACCCTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY446152       <-- GAGAAAGAGGGAATCCTCTCATCTTTAGCAAAACGTGCAAAGACCCTTGA  Raphanus sativus cv GSK3-1
FD958545       <-- GAGAAAGAGGGAATCCTCTCCTCCTTAGCAAAACGTGCAAAGACTCTTGA  Raphanus raphanistrum subsp. maritimus
EW737242       <-- ..........GAATCCTCTCGTCTTTAGCAAAACGTGCAAAGACCCTTGA  Raphanus sativus cv Rat-Tail Radish #3870
FD983041       <-- ........................TTAGCAAAACGTGCAAAGACCCTTGA  Raphanus raphanistrum subsp. landra
FY453862       --> GAGAAAGAGGGAATCCTCTCATCTTTAGCAAAACGTGCAAAGACCCTTGA  Raphanus sativus cv GSK3-1
FY454568       --> GAGAAAGAGGGAATCCTCTCATCTTTAGCAAAACGTGCAAAGACCCTTGA  Raphanus sativus cv GSK3-1
FD961872       --> GAGAAAGAGGGAATCCTCTCCTCCTTAGCAAAACGTGCAAAGACTCTTGA  Raphanus raphanistrum subsp. maritimus
FD986877       --> GAGAAAGAGGGAATCCTCTCGTCTTTAGCAAAACGTGCAAAGACCCTTGA  Raphanus raphanistrum subsp. landra
EW732824       --> ..........GAATCCTCTCGTCTTTAGCAAAACGTGCAAAGACCCTTGA  Raphanus sativus cv Rat-Tail Radish #3870
EY941499       --> .......................................gAGACTCTTGA  Raphanus sativus cv Early Scarlet Globe
FD532968       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               551    -    601
UN14333        --> AGAAGCTCTGAACAAGTTGGAGGGTGTGACATGCAACAGAGCAGAAGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY446152       <-- AGAAGCTCTGAACAAGTTGGAGGGTGTGACATGCAACAGAGCAGAAGGAG
FD958545       <-- AGAAGCTCTGAACAAGTTGGAGGGTGTGACATGCAACAGAGCAGAAGGAG
EW737242       <-- AGAAGCTCTGAACAAGTTGGAGGGTGTGACATGCAACAGAGCAGAAGGAG
FD983041       <-- AGAAGCTCTGAACAAGTTGGAGGGTGTGACATGCAACAGGGCAGAAGGAG
FY453862       --> AGAAGCTCTGAACAAGTTGGAGGGTGTGACATGCAACAGAGCAGAAGGAG
FY454568       --> AGAAGCTCTGAACAAGTTGGAGGGTGTGACATGCAACAGAGCAGAAGGAG
FD961872       --> AGAAGCTCTGAACAAGTTGGAGGGTGTGACATGCAACAGAGCAGAAGGAG
FD986877       --> AGAAGCTCTGAACAAGTTGGAGGGTGTGACATGCAACAGGGCAGAAGGAG
EW732824       --> AGAAGCTCTGAACAAGTTGGAGGGTGTGACATGCAACAGAGCAGAAGGAG
EY941499       --> AGAAGCTCTGAACAAGTTGGAGGGTGTGACATGCAACAGAGCAGAAGGAG
FD532968       --> ..................................................

               601    -    651
UN14333        --> CTATGTATCTATTCCCTTGCATCAACCTTCCCCAAAAGGCGATTGCAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY446152       <-- CTATGTATCTATTCCCTTGCATCAACCTTCCACAAAAGGCGATTGCAGCT  Raphanus sativus cv GSK3-1
FD958545       <-- CTATGTATCTATTCCCTTGCATCAACCTTCCACAAAAGGCGATTGCAGCT  Raphanus raphanistrum subsp. maritimus
EW737242       <-- CTATGTATCTATTCCCTTGCATCAACCTTCCCCAAAAGGCGATTGCAGCT  Raphanus sativus cv Rat-Tail Radish #3870
FD983041       <-- CTATGTATCTATTCCCTTGCATCAACCTTCCCCAAAAGGCGATTGCAGCT  Raphanus raphanistrum subsp. landra
FY453862       --> CTATGTATCTATTCCCTTGCATCAACCTTCCACAAAAGGCGATTGCAGCT  Raphanus sativus cv GSK3-1
FY454568       --> CTATGTATCTATTCCCTTGCATCAACCTTCCACAAAAGGCGATTGCAGCT  Raphanus sativus cv GSK3-1
FD961872       --> CTATGTATCTATTCCCTTGCATCAACCTTCCACAAAAGGCGATTGCAGCT  Raphanus raphanistrum subsp. maritimus
FD986877       --> CTATGTATCTATTCCCTTGCATCAACCTTCCCCAAAAGGCGATTGCAGCT  Raphanus raphanistrum subsp. landra
EW732824       --> CTATGTATCTATTCCCTTGCATCAACCTTCCCCAAAAGGCGATTGCAGCT  Raphanus sativus cv Rat-Tail Radish #3870
EY941499       --> CTATGTATCTATCCCCTTGCATCAATCTTCCCCAAAAGGCGATTGCAGCT  Raphanus sativus cv Early Scarlet Globe
FD532968       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               651    -    701
UN14333        --> GCAGAAGCTGCAAAGACAGCACCAGACGCTTTCTACTGCAAACGCCTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY446152       <-- GCAGAAGCTGCAAAGACAGCACCAGACGCTTTCTACTGCAAACGCCTTTT
FD958545       <-- GCAGAAGCTGCAAAGACAGCACCAGATGCTTTTTACTGCAAACGCCTTTT
EW737242       <-- GCAGAAGCTGCAAAGACAGCACCAGACGCTTTTTACTGCAAACGCCTTTT
FD983041       <-- GCAGAAGCTGCAAAGACAGCACCAGACGCTTTCTACTGCAATCGCCTTTT
FY453862       --> GCAGAAGCTGCAAAGACAGCACCAGACGCTTTCTACTGCAAACGCCTTTT
FY454568       --> GCAGAAGCTGCAAAGACAGCACCAGACGCTTTCTACTGCAAACGCCTTTT
FD961872       --> GCAGAAGCTGCAAAGACAGCACCAGATGCTTTCTACTGCAAACGCCTTTT
FD986877       --> GCAGAAGCTGCAAAGACAGCACCAGACGCTTTCTACTGCAATCGCCTTTT
EW732824       --> GCAGAAGCTGCAAAGACAGCACCAGACGCTTTCTACTGCAAACGCCTTTT
EY941499       --> GCAGAAGCTGCAAAGACAGCACCAGACGCTTTCTACTGCAAACGCCTTTT
FD532968       --> ..................................................

               701    -    751
UN14333        --> AAACGCTACTGGAATAGTTGTAGTCCCTGGTTCTGGCTTTAGACAGGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY446152       <-- AAACGCTACTGGAATAGTTGTAGTCCCTGGTTCTGGCTTTAGACAGGTAC  Raphanus sativus cv GSK3-1
FD958545       <-- AAACGCTACTGGAATAGTTGTAGTCCCTGGTTCTGGCTTTAGACAGGTAC  Raphanus raphanistrum subsp. maritimus
EW737242       <-- AAACGCTACTGGAATAGTTGTAGTCCCCGGTTCTGGCTTTAGACAGGTAC  Raphanus sativus cv Rat-Tail Radish #3870
FD983041       <-- AAACGCTACTGGAATAGTTGTAGTCCCCGGTTCTGGCTTTAGACAGGTAC  Raphanus raphanistrum subsp. landra
FY453862       --> AAACGCTACTGGAATAGTTGTAGTCCCTGGTTCTGGCTTTAGACAGGTAC  Raphanus sativus cv GSK3-1
FY454568       --> AAACGCTACTGGAATAGTTGTAGTCCCTGGTTCTGGCTTTAGACAGGTAC  Raphanus sativus cv GSK3-1
FD961872       --> AAACGCTACTGGAATAGTTGTAGTCCCTGGTTCTGGCTTTAGACAGGTAC  Raphanus raphanistrum subsp. maritimus
FD986877       --> AAACGCTACTGGAATAGTTGTAGTCCCCGGTTCTGGCTTTAGACAGGTAC  Raphanus raphanistrum subsp. landra
EW732824       --> AAACGCTACTGGAATAGTTGTAGTCCCCGGTTCTGGCTTTAGACAGGTAC  Raphanus sativus cv Rat-Tail Radish #3870
EY941499       --> AAACGCTACTGGAATAGTTGTAGTCCCTGGTTCTGGCTTTAGACAGGTAC  Raphanus sativus cv Early Scarlet Globe
FD532968       --> ..gCGCTACTGGAATAGTTGTAGTCCCCGGTTCTGGCTTTAGACAGGTAC  Raphanus raphanistrum subsp. maritimus

               751    -    801
UN14333        --> CTGGCACATGGCATTTCAGGTGCACTATACTTCCTCAAGAAGATAAGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY446152       <-- CTGGCACATGGCATTTCCGGTGCACTATACTTCCTCAAGAAGATAAGATT
FD958545       <-- CTGGCACATGGCATTTCAGGTGCGCTATACTTCCCCAAGAAGATAAGATT
EW737242       <-- CTGGCACATGGCATTTCAGGTGCACTATACTTCCTCAAGAAGATAAGATT
FD983041       <-- CTGGCACATGGCATTTCAGGTGCACTATACTTCCTCAAGAAGATAAGATT
FY453862       --> CTGGCACATGGCATTTCCGGTGCACTATACTTCCT...............
FY454568       --> CTGGCACATGGCATTTCCGGTGCACTATACTTCCTCAAGAAGATAAGATT
FD961872       --> CTGGCACATGGCATTTCAG-TGCGCTATACTTCCCCAAGAAGATAAGATT
FD986877       --> CTGGCACATGGCATTT..................................
EW732824       --> CTGGCACATGGCATTTCAGGTGCACTATACTTCCTCAAGAAGATAAGATT
EY941499       --> CTGGCACATGGCATTTCAGGTGCACTATACTTCCTCAAGAAGATAAGATT
FD532968       --> CTGGCACATGGCATTTCAGGTGCACTATACTTCCTCAAGAAGATAAGATT

               801    -    851
UN14333        --> CCTGCAATCGTAAACCGTCTCACTGAGTTCCACAAGAGCTTCATGGATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY446152       <-- CCTGCAATCGTAAACCGTCTCACTGAGTTCCACAAGAGCTTCATGGATGA
FD958545       <-- CCTGCAATCGTAAACCGTCTCACTGAGTTCCACAAGAGCTTCATGGATGA
EW737242       <-- CCTGCAATCGTAAACCGTCTCACTGAGTTCCACAAGAGCTTCATGGATGA
FD983041       <-- CCTGCAATCGTAAACCGTCTCACTGAGTTCCTCGAGAGCTTCATGGATGA
FY453862       --> ..................................................
FY454568       --> CCTGCAATCG........................................
FD961872       --> CCTGCAATCGTAAACCGTCTCACTGAGTTCCAC.................
FD986877       --> ..................................................
EW732824       --> CCTGCAATCGTAAACCGTCTCACTGAGTTCCACAAGAGCTTCATGGATGA
EY941499       --> CCTGCAATCGTAAACC---TCACTGAGTTCCACAAGAGCTTCATGGATGA
FD532968       --> CCTTCAATCGTAAACCGTCTCACTGAGTTCCACAAGAGCTTCATGATTGA

               851    -    901
UN14333        --> GTTCCGCGACTAAGGGATTCTGATTCTTAAGACCTCTCAAAGATATGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY446152       <-- GTTCCGCGACTAAGGGATTCTGATTCTTAAGACCTCTCAAAGATATGATA
FD958545       <-- GTTCCGCGACTAAGGGATTCTGATTCTTAAGACCTCTCAAAGATATGATA
EW737242       <-- GTTCCGCGACTAAGGGATTCTGATTCTTAAGACCTCTCAAAGATATGATA
FD983041       <-- GTTCCGCGACTAAGGGATTCTGATTCTTAAGACCTCTCAAAGATATGATA
FY453862       --> ..................................................
FY454568       --> ..................................................
FD961872       --> ..................................................
FD986877       --> ..................................................
EW732824       --> GTTCCGCGACTAAGGGATTCTGATTCTTAAGACCTCTCAAAGATATGATA
EY941499       --> GTTCCGCGACTAAGGGATTCTGATTCTTAAGACCTCTCAAAGATATGATA
FD532968       --> GTTCCGCGACTAAGGGATTCTGATTCTTAAGACCTCTCAAAGATATGATA

               901    -    951
UN14333        --> ATAAGCAAAGGAGACGCATGCAGTTTCTTTTCCGTAGACATTGTGCTTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY446152       <-- ATAAGCAAAGGAGACGCATGCCGTTTCTTTTCCGTAGACATTGTGCTTAC
FD958545       <-- ATAAGCAAAGGAGACGCATGCAGTTTCTTT-CCGTAGACTTTGTGCTTGC
EW737242       <-- ATAAGCAAAGGAGACGCATGCAGTTTCTTTTCCGTAGACATTGTGCTTAC
FD983041       <-- ATAAGCAAAGGAGACGCATGCAGTTTCTTTTCCGTAGACATTGTGCTTAC
FY453862       --> ..................................................
FY454568       --> ..................................................
FD961872       --> ..................................................
FD986877       --> ..................................................
EW732824       --> ATAAGCAAAGGAGACGCATGCAGTTTCTTTTCCGTAGACATTGTGCTTAC
EY941499       --> ATAAGCAAAGGAGACGCACGCAGTTTCTTTTCCGTAGACATTGTGCTTAC
FD532968       --> ATAAGCAAAGGAGACGCATGCAGTTTCTTTTCCGTAGGCATTGTGCTTAC

               951    -   1001
UN14333        --> TAAGACGTGAGCATCAGTTA-GAGCTTTTGTGCGAGCAAGAAGTTTTATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY446152       <-- TAAGACGTGAGCATCAGTTA-GAGCTTTTGTGCGAGCAAGAAGTTTTATT
FD958545       <-- TAAGACGTGAGCATCAGTTA-GAGCTTTTGTGCGAGCAAGAAGTTTTATT
EW737242       <-- TAAGACGTGAGCATCAGTTA-GAGCTTTTGTGCGAGCAAGAAGTTTTATT
FD983041       <-- TAAG..............................................
FY453862       --> ..................................................
FY454568       --> ..................................................
FD961872       --> ..................................................
FD986877       --> ..................................................
EW732824       --> TAAGACGTGAGCATCAGTTA-GAGCTTTTGTGCGAGCAAGAAGTTTTATT
EY941499       --> TAAGACGTGAGCATCAGTTA-GAGCTTTTGTGCGAGCAAGAAGTGTTATT
FD532968       --> TAAGACGTGAGCATCAGTTAAGAGCTTTTGTGCGAACAAGAAGTTTTATT

               1001   -   1051
UN14333        --> GAGTTCTTACAGACTGATTAAACTAAACGCAATGTTCTTTTGCAGACCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY446152       <-- GAGTTCTTACAGACTGATTAAACTAAACGCAA..................
FD958545       <-- GAGTTCTTACAGACTGATTAAACTAAACGCAATGTTCTTTTGCAGACCAT
EW737242       <-- GAGTTCTTACAGACTGGTTAAACTAAACGCAATGTTCTTTTGCGGACCAT
FD983041       <-- ..................................................
FY453862       --> ..................................................
FY454568       --> ..................................................
FD961872       --> ..................................................
FD986877       --> ..................................................
EW732824       --> GAGTTCTTACAGACTGGTTAAACTAAACGCAATGTTCTTTTGCGGACCAT
EY941499       --> GAGTTCTTACAGACTGATTAAACTAAACGCAATGTTCTTTTGCAGACCAT
FD532968       --> GAGTTCTTACAGACTGATTAAACTAAACGCAATGTTCTTTTGCAGACCAT

               1051   -   1101
UN14333        --> AATATTAAAACATTGTTGAATACTGCATGCTTTTCCATATTCTAAAATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY446152       <-- ..................................................
FD958545       <-- AATATTAAAACATTGTTGAATACTGCATGCTTTTCCATATTCTAAAATAT
EW737242       <-- AATATTAAAACATTGTTGAAT.............................
FD983041       <-- ..................................................
FY453862       --> ..................................................
FY454568       --> ..................................................
FD961872       --> ..................................................
FD986877       --> ..................................................
EW732824       --> AATATTAAAACATTGTTGAAT.............................
EY941499       --> AATATTAAAACATTGTTG................................
FD532968       --> AATATTAAAACATTGTTGAATACTGCATGCTTTTCCATATTCTAAAATAT

               1101   -   1151
UN14333        --> ACCGGTTTGTTATAATT
                   ~~~~~~~~~~~~~~~~~
FY446152       <-- .................
FD958545       <-- ACCGGTTTGTTATAATT
EW737242       <-- .................
FD983041       <-- .................
FY453862       --> .................
FY454568       --> .................
FD961872       --> .................
FD986877       --> .................
EW732824       --> .................
EY941499       --> .................
FD532968       --> ACCGGTTTGTTAT....