1      -     51
UN14334        --> GGAAAATATCTAAATCTTCAAGGTGAAAAAAGAATCTAATCGTCGAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539017       <-- ..................................................
EX892312       <-- ..................................................
EX759199       <-- ..................................................
EY903126       <-- ..................................................
FD537955       <-- ..................................................
EY928396       <-- ..................................................
FD564862       <-- ..................................................
FD944932       <-- ..................................................
FD936003       <-- ..................................................
FD574449       <-- ..................................................
EW728042       <-- ..................................................
FD541735       --> GGAAAATATCTAAATCTTCAAGGTGAAAAAAGAATCTAATCGTCGAAAAA
EY907094       --> .......................................ggGTCGAAAAA
FD543119       --> ..................................................
EW722847       --> ..................................................
EW725024       --> ..................................................
EW726694       --> ..................................................
FD570452       --> ..................................................
FD949268       --> ..................................................
EX755013       --> ..................................................
EW723990       --> ..................................................

               51     -    101
UN14334        --> TGTTGAGATCCTCGTTTCGGCTTCTCTATATAACAAGAAGTACCAATCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539017       <-- ..................................................
EX892312       <-- ..................................................
EX759199       <-- ..................................................
EY903126       <-- ..................................................
FD537955       <-- ..................................................
EY928396       <-- ..................................................
FD564862       <-- ..................................................
FD944932       <-- ..................................................
FD936003       <-- ..................................................
FD574449       <-- ..................................................
EW728042       <-- ..................................................
FD541735       --> TGTTGAGATCCTCGTTTCGGCTTCTCTATATAACAAGAAGTACCAATCTA
EY907094       --> TGTTGAGATCCTCGTTTCGGCTTCTCTATATAACAAGAAGTACCAATCTA
FD543119       --> ..................................................
EW722847       --> ..................................................
EW725024       --> ..................................................
EW726694       --> ..................................................
FD570452       --> ..................................................
FD949268       --> ..................................................
EX755013       --> ..................................................
EW723990       --> ..................................................

               101    -    151
UN14334        --> CTTGTCCGAGCTTCATGATCATCATCATCATCATCGCTCTCTCTGTTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539017       <-- ................GATCATCATCATCATCATCGCTCTCTCTGT-CTC
EX892312       <-- ..................................................
EX759199       <-- ..................................................
EY903126       <-- ..................................................
FD537955       <-- ..................................................
EY928396       <-- ..................................................
FD564862       <-- ..................................................
FD944932       <-- ..................................................
FD936003       <-- ..................................................
FD574449       <-- ..................................................
EW728042       <-- ..................................................
FD541735       --> CTTGTCCGAGCTTCAT---CATCATCATCATCATCGCTCTCTCTGTTCTC
EY907094       --> CTTGTCCGAGCTTCATCATCATCATCATCATCATCGCTCTCTCTGTTCTC
FD543119       --> ...............gGATCATCATCATCATCATCGCTCTCTCTGTTCTC
EW722847       --> .............ccggggggagcttATCATCATCGCTCTCTCTGTTCTC
EW725024       --> ........................ggATCATCATCGCTCTCTCTGTTCTC
EW726694       --> ........................ggATCATCATCGCTCTCTCTGTTCTC
FD570452       --> ........................ggATCATCATCGCTCTCTCTGTTCTC
FD949268       --> ........................ggATCATCATCGCTCTCTCTGTTCTC
EX755013       --> ..............................ggATCGCTCTCTCTGTTCTC
EW723990       --> ..................................................

               151    -    201
UN14334        --> ATCTAAGTCCTCCAATTCTGCGAAACCACTTTTCACTTCTCATCGTCAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539017       <-- ATCTAAAT---CCAATTC-CCGAAACCACTTCTCACTTCTCATCGTCAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892312       <-- ...................GCGAAACCACTTTTCACTTCTCATCGTCAGA  Raphanus sativus var. oleiformis
EX759199       <-- ........................................CATCGTCAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903126       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537955       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY928396       <-- ..................................................  Raphanus sativus var. oleiformis
FD564862       <-- ..................................................  Raphanus sativus var. oleiformis
FD944932       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD936003       <-- ..................................................  Raphanus sativus var. oleiformis
FD574449       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW728042       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD541735       --> ATCTAAATCC---AATTCCCCGAAACCACTTCTCACTTCTCATCGTCAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907094       --> ATCTAAATCC---AATTCCCCGAAACCACTTCTCACTTCTCATCGTCAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543119       --> ATCTAAATCC---AATTCCCCGAAACCACTTCTCACTTCTCATCGTCAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW722847       --> ATCCAAGTCCTCCAATTCTGCGAAACCACTTTTCACTTCTCATCGTCAGG  Raphanus sativus cv Early Scarlet Globe
EW725024       --> ATCTAAGTCCTCCAATTCTGCGAAACCACTTTTCACTTCTCATCGTCAGG  Raphanus sativus cv Early Scarlet Globe
EW726694       --> ATCTAAGTCCTCCAATTCTGCGAAACCACTTTTCACTTCTCATCGTCAGG  Raphanus sativus cv Early Scarlet Globe
FD570452       --> ATCTAAGTCCTCCAATTCTGCGAAACCACTTTTCACTTCTCATCGTCAGG  Raphanus sativus cv Early Scarlet Globe
FD949268       --> ATCTAAGTCCTCCAATTCTGCGAAACCACTTTTCACTTCTCATCGTCAGG  Raphanus sativus cv Early Scarlet Globe
EX755013       --> ATCTAAATCC---AATTCCCCGAAACCACTTCTCACTTCTCATCGTCAGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723990       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               201    -    251
UN14334        --> TTCCATTATCAACAACGGGAGTTAAATTCTCTAAGTCGGAACATTCCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539017       <-- TTCCATTATCAACAACGGGAGTTAAATTCTCTAAGTCGGAACATTCCATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892312       <-- TTCCATTATCAACAACGGGAACTAAACTCTCTAAGTCGGAACATTCCATG  Raphanus sativus var. oleiformis
EX759199       <-- TTCCATTATCAACAACGGGAGTTAAATTCTCTAAGTCGGAACATTCCATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903126       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537955       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY928396       <-- ..................................................  Raphanus sativus var. oleiformis
FD564862       <-- ..................................................  Raphanus sativus var. oleiformis
FD944932       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD936003       <-- ..................................................  Raphanus sativus var. oleiformis
FD574449       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW728042       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD541735       --> TTCCATTATCAACAACGGGAGTTAAATTCTCTAAGTCGGAACATTCCATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907094       --> TTCCATTATCAACAACGGGAGTTAAATTCTCTAAGTCGGAACATTCCATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543119       --> TTCCATTATCAACAACGGGAGTTAAATTCTCTAAGTCGGAACATTCCATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW722847       --> TTCCATTATCAACAACGGGAGCTAAACTCTCTAAGTCGGAACATTCCATG  Raphanus sativus cv Early Scarlet Globe
EW725024       --> TTCCATTATCAACAACGGGAGCTAAATTCTCTAAGTCGGAACATTCCATG  Raphanus sativus cv Early Scarlet Globe
EW726694       --> TTCCATTATCAACAACGGGAGCTAAATTCTCTAAGTCGGAACATTCCATG  Raphanus sativus cv Early Scarlet Globe
FD570452       --> TTCCATTATCAACAACGGGAGCTAAACTCTCTAAGTCGGAACATTCCATG  Raphanus sativus cv Early Scarlet Globe
FD949268       --> TTCCATTATCAACAACGGGAGCTAAACTCTCTAAGTCGGAACATTCCATG  Raphanus sativus cv Early Scarlet Globe
EX755013       --> TTCCATTATCAACAACGGGAGTTAAATTCTCTAAGTCGGAACATTCCATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723990       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               251    -    301
UN14334        --> GCCACTTCCTCGGAGCCCAAGTCCATCTATGATTTCACCGTCAAGGATGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539017       <-- GCCACTTCCTCGGAGCCCAAGTCCATCTATGATTTCACCGTCAAGGATGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892312       <-- GCCACTTCCTCCGAGCCCAAGTCCATCTATGGTTTCACCGTCAAGGATGC  Raphanus sativus var. oleiformis
EX759199       <-- GCCACTTCCTCGGAGCCCAAGTCCATCTATGATT---TCGTCAAGGATGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903126       <-- .....................................CCGTCAAGGATGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537955       <-- ..........................................AAGGATGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY928396       <-- ..................................................  Raphanus sativus var. oleiformis
FD564862       <-- ..................................................  Raphanus sativus var. oleiformis
FD944932       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD936003       <-- ..................................................  Raphanus sativus var. oleiformis
FD574449       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW728042       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD541735       --> GCCACTTCCTCGGAGCCCAAGTCCATCTATGATTTCACCGTCAAGGATGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907094       --> GCCACTTCCTCGGAGCCCAAGTCCATCTATGATTTCACCGTCAAGGATGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543119       --> GCCACTTCCTCGGAGCCCAAGTCCATCTATGATTTCACCGTCAAGGATGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW722847       --> GCCACTTCCTCCGAGCCCAAGTCCATCTATGATTTCACCGTCAAGGATGC  Raphanus sativus cv Early Scarlet Globe
EW725024       --> GCCACTTCCTCCGAGCCCAAGTCCATCTATGATTTCACCGTCAAGGATGC  Raphanus sativus cv Early Scarlet Globe
EW726694       --> GCCACTTCCTCCGAGCCCAAGTCCATCTATGATTTCACCGTCAAGGATGC  Raphanus sativus cv Early Scarlet Globe
FD570452       --> GCCACTTCCTCCGAGCCCAAGTCCATCTATGATTTCACCGTCAAGGATGC  Raphanus sativus cv Early Scarlet Globe
FD949268       --> GTCACTTCCTCCGAGCCCAAGTCCATCTATGATTTCACCGTCAAGGATGC  Raphanus sativus cv Early Scarlet Globe
EX755013       --> GCCACTTCCTCGGAGCCCAAGTCCATCTATGATTTC---GTCAAGGATGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723990       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               301    -    351
UN14334        --> GAAGGGAAATGATGTTGATCTAAGCACTTACAAGGGGAAGGTTCTCTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539017       <-- GAAGGGAAATGATGTTGATCTAAGCACTTACAAGGGGAAGGTTCTCTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892312       <-- GAAGGGAAATGATGTTGATCTAAGCACTTACAAGGGGAAGGTTCTCTTGA  Raphanus sativus var. oleiformis
EX759199       <-- GAAGGGAAATGATGTTGATCTAAGCACTTACAAGGGGAAGGTTCTCTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903126       <-- GAAGGGAAATGATGTTGATCTAAGCACTTACAAGGGGAAGGTTCTCTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537955       <-- GAAGGGAAGTGATGTTGATCTAAGCACTTACAAGGGGAAGGTTCTCTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY928396       <-- ...................CTAAGCACTTACAAGGGGAAGGTTCTCTTGA  Raphanus sativus var. oleiformis
FD564862       <-- ..................................................  Raphanus sativus var. oleiformis
FD944932       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD936003       <-- ..................................................  Raphanus sativus var. oleiformis
FD574449       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW728042       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD541735       --> GAAGGGAAGTGATGTTGATCTAAGCACTTACAAGGGGAAGGTTCTCTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907094       --> GAAGGGAAATGATGTTGATCTAAGCACTTACAAGGGGAAGGTTCTCTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543119       --> GAAGGGAAATGATGTTGATCTAAGCACTTACAAGGGGAAGGTTCTCTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW722847       --> GAAGGGGAATGATGTTGATCTAAGCACTTACAAGGGGAAGGTTCTCTTGA  Raphanus sativus cv Early Scarlet Globe
EW725024       --> GAAGGGGAATGATGTTGATCTAAGCACTTACAAGGGGAAGGTTCTCTTGA  Raphanus sativus cv Early Scarlet Globe
EW726694       --> GAAGGGGAATGATGTTGATCTAAGCACTTACAAGGGGAAGGTTCTCTTGA  Raphanus sativus cv Early Scarlet Globe
FD570452       --> GAAGGGGAATGATGTTGATCTAAGCACTTACAAGGGGAAGGTTCTCTTGA  Raphanus sativus cv Early Scarlet Globe
FD949268       --> GAAGGGGAATGATGTTGATCTAAGCACTTACAAGGGGAAGGTTCTCTTGA  Raphanus sativus cv Early Scarlet Globe
EX755013       --> GAAGGGAAATGATGTTGATCTAAGCACTTACAAGGGGAAGGTTCTCTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723990       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               351    -    401
UN14334        --> TTGTCAACGTTGCTTCTCAGTGTGGTTTGACCAATTCGAACTATACCGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539017       <-- TTGTCAACGTTGCTTCTCAGTGTGGTTTGACCAATTCGAACTATACCGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892312       <-- TTGTCAACGTTGCTTCTCAGTGTGGTTTGACCAATTCGAACTATACCGAG  Raphanus sativus var. oleiformis
EX759199       <-- TTGTCAACGTTGCTTCTCAGTGTGGTTTGACCAATTCGAACTATACCGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903126       <-- TTGTCAACGTTGCTTCTCAGTGTGGTTTGACCAATTCGAACTATACCGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537955       <-- TTGTCAACGTTGCTTCTCAGTGTGGTTTGACCAATTCGAACTATACCGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY928396       <-- TTGTCAACGTTGCTTCTCAGTGTGGTTTGACCAATTCGAACTATACCGAG  Raphanus sativus var. oleiformis
FD564862       <-- ............................................ACCGAG  Raphanus sativus var. oleiformis
FD944932       <-- ............................................actGAG  Raphanus sativus cv Early Scarlet Globe
FD936003       <-- ..................................................  Raphanus sativus var. oleiformis
FD574449       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW728042       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD541735       --> TTGTCAACGTTGCTTCTCAGTGTGGTTTGACCAATTCGAACTATACCGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907094       --> TTGTCAACGTTGCTTCTCAGTGTGGTTTGACCAATTCGAACTATACCGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543119       --> TTGTCAACGTTGCTTCTCAGTGTGGTTTGACCAATTCGAACTATACCGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW722847       --> TTGTCAACGTTGCTTCTCAGTGTGGTTTGACCAATTCGAACTATACTGAG  Raphanus sativus cv Early Scarlet Globe
EW725024       --> TTGTCAACGTTGCTTCTCAGTGTGGTTTGACCAATTCGAACTATACTGAG  Raphanus sativus cv Early Scarlet Globe
EW726694       --> TTGTCAACGTTGCTTCTCAGTGTGGTTTGACCAATTCGAACTATACTGAG  Raphanus sativus cv Early Scarlet Globe
FD570452       --> TTGTCAACGTTGCTTCTCAGTGTGGTTTGACCAATTCGAACTATACTGAG  Raphanus sativus cv Early Scarlet Globe
FD949268       --> TTGTCAACGTTGCTTCTCAGTGTGGTTTGACCAATTCGAACTATACTGAG  Raphanus sativus cv Early Scarlet Globe
EX755013       --> TTGTCAACGTTGCTTCTCAGTGTGGTTTGACCAATTCGAACTATACCGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723990       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               401    -    451
UN14334        --> CTTGCACAGCTGTACCAGAAGTACAAAGATCATGGGTTTGAGATCCTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539017       <-- CTTGCACAGCTGTACCAGAAGTACAAAGATCATGGGTTTGAGATCCTTGC
EX892312       <-- CTTGCACAGCTGTACCAGAAGTACAAAGATCATGGGTTTGAGATCCTTGC
EX759199       <-- CTTGCACAGCTGTACCAGAAGTACAAAGATCATGGGTTTGAGATCCTTGC
EY903126       <-- CTTGCACAGCTGTACCAGAAGTACAAAGATCATGGGTTTGAGATCCTTGC
FD537955       <-- CTTGCACAGCTGTACCAGAAGTACGAAGATCATGGGTTTGAGATCCTTGC
EY928396       <-- CTTGCACAGCTGTACCAGAAGTACAAAGATCATGGGTTTGAGATCCTTGC
FD564862       <-- CTTGCACAGCTGTACCAGAAGTACAAAGATCATGGGTTTGAGATCCTTGC
FD944932       <-- CTTGCACAGCTGTACCAGAAGTACAAAGATCATGGGTTTGAGATCCTTGC
FD936003       <-- ..................................................
FD574449       <-- ..................................................
EW728042       <-- ..................................................
FD541735       --> CTTGCACAGCTGTACCAGAAGTACGAAGATCATGGGTTTGAGATCCTTGC
EY907094       --> CTTGCACAGCTGTACCAGAAGTACAAAGATCATGGGTTTGAGATCCTTGC
FD543119       --> CTTGCACAGCTGTACCAGAAGTACAAAGATCATGGGTTTGAGATCCTTGC
EW722847       --> CTTGCACAGCTGTACCAGAAGTACAAAGATCATGGGTTTGAGATCCTTGC
EW725024       --> CTTGCACAGCTGTACCAGAAGTACAAAGATCATGGGTTTGAGATCCTTGC
EW726694       --> CTTGCACAGCTGTACCAGAAGTACAAAGATCATGGGTTTGAGATCCTTGC
FD570452       --> CTTGCACAGCTGTACCAGAAGTACAAAGATCATGGGTTTGAGATCCTTGC
FD949268       --> CTTGCACAGCTGTACCAGAAGTACAAAGATCATGGGTTTGAGATCCTTGC
EX755013       --> CTTGCACAGCTGTACCAGAAGTACAAAGATCATGGGTTTGAGATCCTTGC
EW723990       --> ...............................................TGC

               451    -    501
UN14334        --> GTTCCCCTGTAACCAGTTTGGGAATCAAGAACCTGGTTCTAATGAAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539017       <-- GTTCCCCTGTAACCAGTTTGGGAATCAAGAACCTGGTTCTAATGAAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892312       <-- GTTCCCCTGTAACCAGTTTGGGAATCAAGAACCTGGTTCTAATCAAGAGA  Raphanus sativus var. oleiformis
EX759199       <-- GTTCCCCTGTAACCAGTTTGGGAATCAAGGACCTGGTTCTAATGAAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903126       <-- GTTCCCCTGTAACCAGTTTGGGAATCAAGAACCTGGTTCTAATGAAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537955       <-- GTTCCCCTGTAACCAGTTTGGGAATCAAGAACCTGGTTCTAATGAAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY928396       <-- GTTCCCCTGTAACCAGTTTGGGAATCAAGAACCTGGTTCTAATGAAGAGA  Raphanus sativus var. oleiformis
FD564862       <-- GTTCCCCTGTAACCAGTTTGGGAATCAAGAACCTGGTTTTAATGAAGAGA  Raphanus sativus var. oleiformis
FD944932       <-- GTTCCCCTGTAACCAGTTTGGGAATCAAGAACCCGGTTCTAATGAAGAGA  Raphanus sativus cv Early Scarlet Globe
FD936003       <-- ............CCAGTTTGGGAATCAAGAACCTGGTTCTAATGAAGAGA  Raphanus sativus var. oleiformis
FD574449       <-- .............................................AGAGA  Raphanus sativus cv Early Scarlet Globe
EW728042       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD541735       --> GTTCCCCTGTAACCAGTTTGGGAATCAAGAACCTGGTTCTAATGAAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907094       --> GTTCCCCTGTAACCAGTTTGGGAATCAAGAACCTGGTTCTAATGAAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543119       --> GTTCCCCTGTAACCAGTTTGGGAATCAAGAACCTGGTTCTAATGAAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW722847       --> GTTCCCCTGTAACCAGTTTGGGAATCAAGAACCCGGTTCTAATGAAGAGA  Raphanus sativus cv Early Scarlet Globe
EW725024       --> GTTCCCCTGTAACCAGTTTGGGAATCAAGAACCCGGTTCTAATGAAGAGA  Raphanus sativus cv Early Scarlet Globe
EW726694       --> GTTCCCCTGTAACCAGTTTGGGAATCAAGAACCCGGTTCTAATGAAGAGA  Raphanus sativus cv Early Scarlet Globe
FD570452       --> GTTCCCCTGTAACCAGTTTGGGAATCAAGAACCCGGTTCTAATGAAGAGA  Raphanus sativus cv Early Scarlet Globe
FD949268       --> GTTCCCCTGTAACCAGTTTGGGAATCAAGAACCCGGTTCTAATGAAGAGA  Raphanus sativus cv Early Scarlet Globe
EX755013       --> GTTCCCCTGTAACCAGTTTGGGAATCAAGGACCTGGTTCTAATGAAGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723990       --> GTTCCCCTGTAACCAGTTTGGGAATCAAGAACCCGGTTCTAATGAAGAGA  Raphanus sativus cv Early Scarlet Globe

               501    -    551
UN14334        --> TTGTTCAGTTTGCCTGTACCCGTTTCAAGGCTGAGTACCCGATCTTTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539017       <-- TTGTTCAGTTTGCCTGTACCCGTTTCAAGACTGAGTACCCGATCTTTGAT
EX892312       <-- TTGTTCAGTTTGCCTGTACCCGTTTCAAGGCTGAGTACCCTATCTTTGAT
EX759199       <-- TTGTTCAGTTTGCCTGTACCCGTTTCAAGGCTGAGTACCCGATCTTTGAT
EY903126       <-- TTGTTCAGTTTGCCTGTACCCGTTTCAAGGCTGAGTACCCGATCTTTGAT
FD537955       <-- TTGTTCAGTTTGCCTGTACCCGTTTCAAGGCTGAGTACCCGATCTTTGAT
EY928396       <-- TTGTTCAGTTTGCCTGTACCCGTTTCAAGGCTGAGTACCCTACCTTTGAT
FD564862       <-- TTGTTCAGTTTGCCTGTACCCGTTTCAAGGCTGAGTACCCTATCTTTGAT
FD944932       <-- TTGTTCAGTTTGCCTGTACCCGTTTCAAGGCTGAGTACCCGATCTTTGAT
FD936003       <-- TTGTTTAGTTTGCCTGTACCCGTTTCAAGGCTGAGTACCCTATCTTTGAT
FD574449       <-- TTGTTCAGTTTGCCTGTACCCGTTTCAAGGCTGAGTACCCGATCTTTGAT
EW728042       <-- ..................................................
FD541735       --> TTGTTCAGTTTGCCTGTACCCGTTTCAAGGCTGAGTACCCGATCTTTGAT
EY907094       --> TTGTTCAGTTTGCCTGTACCCGTTTCAAGGCTGAGTACCCGATCTTTGAT
FD543119       --> TTGTTCAGTTTGCCTGTACCCGTTTCAAGACTGAGTACCCGATCTTTGAT
EW722847       --> TTGTTCAGTTTGCCTGTACCCGTTTCAAGGCTGAGTACCCGATCTTTGAT
EW725024       --> TTGTTCAGTTTGCCTGTACCCGTTTCAAGGCTGAGTACCCGATCTTTGAT
EW726694       --> TTGTTCAGTTTGCCTGTACCCGTTTCAAGGCTGAGTACCCGATCTTTGAT
FD570452       --> TTGTTCAGTTTGCCTGTACCCGTTTCAAGGCTGAGTACCCGATCTTTGAT
FD949268       --> TTGTTCAGTTTGCCTGTACCCGTTTCAAGGCTGAGTACCCGATCTTTGAT
EX755013       --> TTGTTCAGTTTGCCTGTACCCGTTTCAAGGCTGAGTACCCGATCTTTGAT
EW723990       --> TTGTTCAGTTTGCCTGTACCCGTTTCAAGGCTGAGTACCCGATCTTTGAT

               551    -    601
UN14334        --> AAGGTTGATGTGAATGGTGACACGGCTGCTCCAATCTATAAGTTCCTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539017       <-- AAGGTTGATGTGAATGGTGACACGGCTGCTCCAATCTATAAGTTCCTGAA
EX892312       <-- AAGGTTGATGTGAATGGTGACACGGCTGCTCCAATCTATAAGTTCCTGAA
EX759199       <-- AAGGTTGATGTGAATGGTGACACGGCTGCTCCAATCTATAAGTTCCTGAA
EY903126       <-- AAGGTTGATGTGAATGGTGACACGGCTGCTCCAATCTATAAGTTCCTGAA
FD537955       <-- AAGGTTGATGTGAATGGTGACACGGCTGCTCCAATCTATAAGTTCCTGAA
EY928396       <-- AAGGTTGATGTGAATGGTGACACGGCTGCTCCAATCTATAAGTTCCTGAA
FD564862       <-- AAGGTTGATGTGAATGGTGACACGGGTGGTCCAATATATAAGTTCCTGAA
FD944932       <-- AAGGTTGATGTGAATGGTGACACGGCTGCTCCAATCTATAAGTTCCTGAA
FD936003       <-- AAGGTTGATGTGAATGGTGACACGGCTGCTCCAATCTATAAGTTCCTGAA
FD574449       <-- AAGGTTGATGTGAATGGTGACACGGCTGCTTCAATCTATAAGTTCCTGAA
EW728042       <-- ..................................................
FD541735       --> AAGGTTGATGTGAATGGTGACACGGCTGCTCCAATCTATAAGTTCCTGAA
EY907094       --> AAGGTTGATGTGAATGGTGA..............................
FD543119       --> AAGGTTGATGTGAATGGTGACACGGCTGCTCCAATCTATAAGTTCCTGAA
EW722847       --> AAGGTTGATGTGAATGGTGACACGGCTGCTCCAATCTATAAGTTCCTGAA
EW725024       --> AAGGTTGATGTGAATGGTGACACGGCTGCTCCAATCTATAAGTTCCTGAA
EW726694       --> AAGGTTGATGTGAATGGTGACACGGCTGCTCCAATCTATAAGTTCCTGAA
FD570452       --> AAGGTTGATGTGAATGGTGACACGGCTGCTTCAATCTATAAGTTCCTGAA
FD949268       --> AAGGTTGATGTGAATGGTGACACGGCTGCTCCAATCTATAAGTTCCTGAA
EX755013       --> AAGGTTGATGTGAATGGTGACACGGCTGCTCCAATCTATAAGTTCCTGAA
EW723990       --> AAGGTTGATGTGAATGGTGACACGGCTGCTCCAATCTATAAGTTCCTGAA

               601    -    651
UN14334        --> ATCAAGCAAAGGTGGGCTTTTTGGAGACGGTATCAAGTGGAACTTTGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539017       <-- ATCAAGCAAAGGTGGGCTTTTTGGAGACGGTATCAAGTGGAACTTTGCCA
EX892312       <-- ATCAAGCAAAGGTGGGCTCTTTGGAGACGGAATCAAGTGGAACTTCGCCA
EX759199       <-- ATCAAGCAAAGGTGGGCTTTTTGGAGACGGTATCAAGTGGAACTTTGCCA
EY903126       <-- ATCAAGCAAAGGTGGGCTTTTTGGAGACGGTATCAAGTGGAACTTTGCCA
FD537955       <-- ATCAAGCAAAGGTGGGCTTTTTGGAGACGGTATCAAGTGGAACTTTGCCA
EY928396       <-- ATCAAGCAAAGGTGGGCTCTTTGGAGACGGAATCAAGTGGAACTTCGCCA
FD564862       <-- ATCAAGCAAAGGTGGGCTTTTTGGAGACGGAATCAAGTGGAACTTGGCCA
FD944932       <-- ATCAAGCAAAGGTGGGCTTTTTGGAGACGGTATCAAGTGGAACTTTGCCA
FD936003       <-- ATCAAGCAAAGGTGGGCTCTTTGGAGACGGAATCAAGTGGAACTTCGCCA
FD574449       <-- ATCAAGCAAAGGTGGGCTTTTTGGAGACGGTATCAAGTGGAACTTTGCCA
EW728042       <-- ..................................................
FD541735       --> ATCAAGCAAAGGTGGGCTTTTTGGAGACGGTATCAAGTGGAACTTTGCCA
EY907094       --> ..................................................
FD543119       --> ATCAAGCAAAGGTGGGCTTTTTGGAGACGGTATCAAGTGGAACTTTGCCA
EW722847       --> ATCAAGCAAAGGTGGGCTTTTTGGAGACGGTATCAAGTGGAACTTTGCCA
EW725024       --> ATCAAGCAAAGGTGGGCTTTTTGGAGACGGTATCAAGTGGAACTTTGCCA
EW726694       --> ATCAAGCAAAGGTGGGCTTTTTGGAGACGGTATCAAGTGGAACTTTGCCA
FD570452       --> ATCAAGCAAAGGTGGGCTTTTTGGAGACGGTATCAAGTGGAACTTTGCCA
FD949268       --> ATCAAGCAAAGGTGGGCTTTTTGGAGACGGTATCAAGTGGAACTTTGCCA
EX755013       --> ATCAAGCAAAGGTGGGCTTTTTGGAGACGGTATCAAGTGGAACTTTGCCA
EW723990       --> ATCAAGCAAAGGTGGGCTTTTTGGAGACGGTATCAAGTGGAACTTTGCCA

               651    -    701
UN14334        --> AGTTCTTGGTTGACAAAGATGGGAATGTTGTGGACCGTTACGCCCCAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539017       <-- AGTTCTTGGTTGACAAAGATGGGAATGTTGTGGACCGTTACGCCCCAACT
EX892312       <-- AGTTCTTGGTTGACAAAGATGGGAATGTTGTGGACCGTTACGCCCCAACT
EX759199       <-- AGTTCTTGGTTGACAAAGATGGGAATGTTGTGGACCGTTACGCCCCAACT
EY903126       <-- AGTTCTTGGTTGACAAAGATGGGAATGTTGTGGACCGTTACGCCCCAACT
FD537955       <-- AGTTCTTGGTTGACAAAGATGGGAATGTTGTGGACCGTTACGCCCCAACT
EY928396       <-- AGTTCTTGGTTGACAAAGATGGGAATGTTGTGGACCGTTACGCCCCAACT
FD564862       <-- AGTTTTTGGTTGACAAAGATGGGAATGTTGTGGACCGTTACGCCCCAAAT
FD944932       <-- AGTTCTTGGTTGACAAAGATGGGAATGTTGTGGACCGTTACGCCCCAACT
FD936003       <-- AGTTCTTGGTTGACAAAGATGGGAATGTTGTGGACCGTTACGTCCCAACT
FD574449       <-- AGTTCTTGGTTGACAAAGATGGGAATGTTGTGGACCGTTACGCCCCAACT
EW728042       <-- ..................................................
FD541735       --> AGTTCTTGGTTGACAAAGATGGGAATGTTGTGGACCGTTACGCCCCAACT
EY907094       --> ..................................................
FD543119       --> AGTTCTTGGTTGACAAAGATGGGAATGTTGTGGACCGTTACGCCCCAACT
EW722847       --> AGTTCTTGGTTGACAAAGATGGGAATGTTGTGGACCGTTACGCCCCAACT
EW725024       --> AGTTCTTGGTTGACAAAGATGGGAATGTTGTGGACCGTTACGCCCCAACT
EW726694       --> AGTTCTTGGTTGACAAAGATGGGAATGTTGTGGACCGTTACGCCCCAACT
FD570452       --> AGTTCTTGGTTGACAAAGATGGGAATGTTGTGGACCGTTACGCCC-AACT
FD949268       --> AGTTCTTGGTTGACAAAGATGGGAATGTTGTGGACCGTTACGCCCCAACT
EX755013       --> AGTTCTTGGTTGACAAAGATGGGAATGTTGTGGACCGTTACGCCCCAACT
EW723990       --> AGTTCTTGGTTGACAAAGATGGGAATGTTGTGGACCGTTACGCCCCAACT

               701    -    751
UN14334        --> ACTTCCCCTCTCAGCATTGAGAAGGACCTGAAGAAACTGTTGGG-AGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539017       <-- ACTTCCCCTCTCAGCATTGAGAAGGACCTGAAGAAACTGTTGGG-AGTTA
EX892312       <-- ACTTCCCCTCTCAGCATTGAGAAGGACCTTAAGAAACTGTTGGG-AGTTA
EX759199       <-- ACTTCCCCTCTCAGCATTGAGAAGGACCTGAAGAAACTGTTGGG-AGTTA
EY903126       <-- ACTTCCCCTCTCAGCATTGAGAAGGACCTGAAGAAACTGTTGGG-AGTTA
FD537955       <-- ACTTCCCCTCTCAGCATTGAGAAGGACCTGAAGAAACTGTTGGG-AGTTA
EY928396       <-- ACTTCCCCTCTCAGCATTGAGAAGGACCTGAAGAAACTGTTGGG-AGTTA
FD564862       <-- ACTTCCCCTTTCAGCATTGAGAAGGACCTGAAGAAACTGTTGGG-AGTTA
FD944932       <-- ACTTCCCCTCTCAGCATTGAGAAGGACCTGAAGAAACTGTTGGG-AGTTA
FD936003       <-- ACTTCCCCCCTCAGCATTGAGAAGGACCTGAAGAAACTGTTGGG-AGTTA
FD574449       <-- ACTTCCCCTTTCAGCATTGAGAAGGACCTGAAGAAACTGTTGGG-AGTTA
EW728042       <-- ..................................................
FD541735       --> ACTTC.............................................
EY907094       --> ..................................................
FD543119       --> ACTTCCCCTCTCAGCATTGAGAAGGACCTGAAGAAACTGTTGGG-AGTTA
EW722847       --> ACTTCCCCTCTCAGCATTGAGAAGGACCTGAAGAAACTGTTGGG-AGTTA
EW725024       --> ACTTCCCCTCTCAGCATTGAGAAGGACCTGAAGAAACTGTTGGG-AGTTA
EW726694       --> ACTTCCCCTCTCAGCATTGAGAAGGACCTGAAGAAACTGTTGGG-AGTTA
FD570452       --> ACTTCCCCTCTCAGCATTGAGAAGGACCTGAAGAAACTGTTGGG-AGTTA
FD949268       --> ACTTCCCCTCTCAGCATTGAG.............................
EX755013       --> ACTTCCCCTCTCAGCATTGAGAAGGACCTGAAGAAACTGTTGGGGAGTTA
EW723990       --> ACTTCCCCTCTCGGCATTGAGAAGGACCTGAAGAAACTGTTGGGGAGTTA

               751    -    801
UN14334        --> CTGCTTAAGCAACGAAGAGGCGCTAGTACTCAAATAAAAGCTCCTACAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539017       <-- CTGCTTAAGCAACGAAGAGGCGCTAGTACTCAAATAAAAGCTCCTACAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX892312       <-- CTGCTTAAGCAACGAAGAGGCGCTAGTACTCAAATAAAAGCTCCTACAAT  Raphanus sativus var. oleiformis
EX759199       <-- CTGCTTAAGCAACGAAGAGGCGCTAGTACTCAAATAAAAGCTCCTACAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903126       <-- CTGCTTAAGCAACGAAGAGGCGCTAGTACTCAAATAAAAGCTCCTACAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537955       <-- CTGCTTAAGCAACGAAGAGGCGCTAGTACTCAAATAAAAGCTCCTACAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY928396       <-- CTGCTTAAGCAACGAAGAGGCGCTAGTACTCAAATAAAAGCTCCTACAAT  Raphanus sativus var. oleiformis
FD564862       <-- CTGCTTAAGCAACGAAGAGGCGCTAGTACTCAAATAAAAGCTCCTACAAT  Raphanus sativus var. oleiformis
FD944932       <-- CTGCTTAAGCAACGAAGAGGCGCTAGTACTCAAATAAAAGCTCCTACAGT  Raphanus sativus cv Early Scarlet Globe
FD936003       <-- CTGCTTAAGCAACGAAGAGGCGCTAGTACTCAAATAAAAGCTCCTACAAT  Raphanus sativus var. oleiformis
FD574449       <-- CTGCTTAGGCAACGAAGAGGCGCTAGTACTCAAATAAAAGCTCCTACAGT  Raphanus sativus cv Early Scarlet Globe
EW728042       <-- .........................................TCCTACAGT  Raphanus sativus cv Early Scarlet Globe
FD541735       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY907094       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543119       --> CTGCTTAAGCAACGAAGAGGCGCTAGTACTCAAATAAA-GCTCCTACAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW722847       --> CTGCTTAAGCAACGAAGAGGCGCTAGTACTCAAATAAAAGCTCCTACAGT  Raphanus sativus cv Early Scarlet Globe
EW725024       --> CTGCTTAAGCAACGAAGAGGCGCTAGTACTCAAATAAAAGCTCCTACAGT  Raphanus sativus cv Early Scarlet Globe
EW726694       --> CTGCTTAAGCAACGAAGAG-CGCTAGTACTCAAATAAAAGCTCCTACAGT  Raphanus sativus cv Early Scarlet Globe
FD570452       --> CTGCTT............................................  Raphanus sativus cv Early Scarlet Globe
FD949268       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX755013       --> CTGCTTAAGCAACGAAGAGGCGCTAGTACTCAAATAAAAGCTCCTACAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723990       --> CTGCTTAAGCAACGAAGAGGCGCTAGTACTCAAATAAAAGCTCCTACAGT  Raphanus sativus cv Early Scarlet Globe

               801    -    851
UN14334        --> ATTGTAATAAGCTGTCTATGTTCTTGAGCGTCTTTGGGATGAGTTGTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539017       <-- ATTGTAATAAGCTGTCTATGTTCTTGAGCGTCTTTGGGATGAGTTGTTTC
EX892312       <-- ATTGTAATAAGCTGTCTATGTTCTTGAGCGTCTTTGGGATGAGTTGCTTC
EX759199       <-- ATTGTAATAAGCTGTCTATGTTCTTGAGCGTCTTTGGGATGAGTTGTTTC
EY903126       <-- ATTGTAATAAGCTGTCTATGTTCTTGAGCGTCTTTGGGATGAGTTGTTTC
FD537955       <-- ATTGTAATAAGCTGTCTATGTTCTTGAGCGTCTTTGGGATGAGTTGTTTC
EY928396       <-- ATTGTAATAAGCTGTCTATGTTCTTGAGCGTCTTTGGGATGAGTTGTTTC
FD564862       <-- ATTGTAATAAGCTGTCTATGTTCTTGAGCGTCTTTGGGATGAGTTGTTTC
FD944932       <-- ATTGTAATAAGCTGTCTATGTTCTTGAGCGTCTTTGGGATGAGTTGTTTC
FD936003       <-- ATTGTAATAAGCTGTCTATGTTCTTGAGCGTCTTTGGGATGAGTTGTTTC
FD574449       <-- ATTGTAATAAGCTGTCTATGTTCTTGAGCGTCTTTGGGATGAGTTGTTTC
EW728042       <-- ATTGTAATAAGCTGTCTATGTTCTTGAGCGTCTTTGGGATGAGTTGTTTC
FD541735       --> ..................................................
EY907094       --> ..................................................
FD543119       --> ATTGTAATAAGCTGTCTATGTTCTTGAGCGTCTTTGGGATGAGTTGTTTC
EW722847       --> ATTGTAATAAGCTGTCTATGTTCTTGAGCGTCTTTGGGATGAGTTGTTTC
EW725024       --> ATTGTAATAAGCTGTCTATGTTCTTGAGCGTCTTTGGGATGAGTTGTTTC
EW726694       --> ATTGTAATAAGCTGTCTATGTTCTTGAGCGTCTTTGGGATGAGTTGT...
FD570452       --> ..................................................
FD949268       --> ..................................................
EX755013       --> ATTGTAATAAGCTGTCTATGTTCTTGAGCGTCTTTGGGATGAGTTGTT-C
EW723990       --> ATTGTAATAAGCTGTCTATGTTCTTGAGCGTCTTGGGGATGAGTTGTTTC

               851    -    901
UN14334        --> CTGCTACTTAATTCTTCGTTTAGCTACTTATGTGTGTAATATCGTCGACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539017       <-- CTGCTACTTAATTCTTCGTTTAGCTACTTATGTGTGTAATATCGTCGACC
EX892312       <-- CTGCTACTTAATTCTTCGTTTAGCTACTTATGTGTGTAATATCGTCGACC
EX759199       <-- CTGCTACTTAATTCTTCGTTTAGCTACTTATGTGTGTAATATCGTCGACC
EY903126       <-- CTGCTACTTAATTCTTCGTTTAGCTACTTATGTGTGTAATATCGTCGACC
FD537955       <-- CTGCTACTTAATTCTTCGTTTAGCTACTTATGTGTGTAATATCGTCGACC
EY928396       <-- CTGCTACTTAATTCTTCGTTTAGCTACTTATGTGTGTAATATCGTCGACC
FD564862       <-- CTGCTACTTAATCCTTCGCTTAGCTACTTATGTGTGTAATATCGTCGACC
FD944932       <-- CTGCTACTTAATTCTTCGTTTAGCTACTTATGTGTGTAATATCGTCGACC
FD936003       <-- CTGCTACTCAATTCTTCGTTTAGCTACTTATGTGTGTAATATCGTCGACC
FD574449       <-- CTGCTACTTAATTCTTCGTTTAGCTACTTATGTGTGTAATATCGTCGACC
EW728042       <-- CTGCTACTTAATTCTTCGTTTAGCTACTTATGTGTGTAATATCGTCGACC
FD541735       --> ..................................................
EY907094       --> ..................................................
FD543119       --> CTGC..............................................
EW722847       --> CTGCTACTTAATTCTTCGTTTAGCTACTTATGTGTGTAATATCGTCGACC
EW725024       --> CTGCTA............................................
EW726694       --> ..................................................
FD570452       --> ..................................................
FD949268       --> ..................................................
EX755013       --> CTGCTACTTAATTCTTCGTTTAGCTACTTATGTGTGTA-TATCGTCGAC-
EW723990       --> CTGCTACTTAATTCTTCGTTTAGC..........................

               901    -    951
UN14334        --> TAAATATCATAATTGCTGTTCCTACTGTATTTTGCCTGTTTCCATGAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539017       <-- TAAATATCATAATTGCTGTTCCcag.........................
EX892312       <-- TAAATATCATAATTGCTGTTCCg...........................
EX759199       <-- TAAATATCATAATTGCTGTTCCT...........................
EY903126       <-- TAAATATCATAATTGCTGTTCC............................
FD537955       <-- TAAATATCATAATTGCTGTTCCTAttcc......................
EY928396       <-- TAAATATCATAATTGCTGTTCCTACTGTATTTTGCCTGTTTCCATGAACC
FD564862       <-- TAAATATCATAATTGCTGTTCCTACTGTATTTTGCCTGTTTCCATGAACC
FD944932       <-- TAAATATCATAATTGCTGTTCCTACTGT......................
FD936003       <-- TAAATATCATAATTGCTGTTCCTACTGTATTTTGCCTGTTTCCATGGACC
FD574449       <-- TAAATATCATAATTGCTGTTCCTACTGTATTTCGCCTGTTTCCATGAACC
EW728042       <-- TAAATA............................................
FD541735       --> ..................................................
EY907094       --> ..................................................
FD543119       --> ..................................................
EW722847       --> TAA-TATCATAATTGCTGTTCCTACTGTAT....................
EW725024       --> ..................................................
EW726694       --> ..................................................
FD570452       --> ..................................................
FD949268       --> ..................................................
EX755013       --> TAAATATCATAATTGCTGTTCtaa..........................
EW723990       --> ..................................................

               951    -   1001
UN14334        --> GTGGGGAGGAGAAATCTAGGGACGGCGTAATATGGTATTTTTAAAATTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539017       <-- ..................................................
EX892312       <-- ..................................................
EX759199       <-- ..................................................
EY903126       <-- ..................................................
FD537955       <-- ..................................................
EY928396       <-- GTGGGGAGGAGAAATCTAGGGACGGCGTAATATGGTATTTTT........
FD564862       <-- GTGGGGAGGAGAAATCTAGGGACGGCGTAATATGGTATTTTTAAAATTCA
FD944932       <-- ..................................................
FD936003       <-- GTGGGGAGGAGAAATCTAGGGACGGCGTAATATGGTATTTTTAAAATTCA
FD574449       <-- GTGGGGAGGAGAAATCTAGAGACGGCGTAATATGATATTTTTAAAATTCA
EW728042       <-- ..................................................
FD541735       --> ..................................................
EY907094       --> ..................................................
FD543119       --> ..................................................
EW722847       --> ..................................................
EW725024       --> ..................................................
EW726694       --> ..................................................
FD570452       --> ..................................................
FD949268       --> ..................................................
EX755013       --> ..................................................
EW723990       --> ..................................................

               1001   -   1051
UN14334        --> GACTTGAAAGTCAAATAATTTTAATTAGATTTTGACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD539017       <-- .....................................
EX892312       <-- .....................................
EX759199       <-- .....................................
EY903126       <-- .....................................
FD537955       <-- .....................................
EY928396       <-- .....................................
FD564862       <-- GACTTGAAAG...........................
FD944932       <-- .....................................
FD936003       <-- GACTTGAAAGTCAAATAATTTTAATTAGATTTTGACC
FD574449       <-- GACTTGAAAGTCAAATAATTTTAATT...........
EW728042       <-- .....................................
FD541735       --> .....................................
EY907094       --> .....................................
FD543119       --> .....................................
EW722847       --> .....................................
EW725024       --> .....................................
EW726694       --> .....................................
FD570452       --> .....................................
FD949268       --> .....................................
EX755013       --> .....................................
EW723990       --> .....................................