RadishBase

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Alignment for radish unigene UN14339

               1      -     51
UN14339        --> GGAACACTTCACTGATCCTTTCTTTCATCTTCAGACGCTGCAAGCAGCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958943       <-- ..................................................
FY439244       <-- ..................................................
EX777670       <-- ..................................................
EX759855       <-- ..................................................
FD567324       <-- ..................................................
EY919622       <-- ..................................................
EY909636       <-- ..................................................
EY928657       <-- ..................................................
FD942816       <-- ..................................................
FD936344       <-- ..................................................
EY923887       --> GGAACACTTCACTGATCCTTTCTTTCATCTTCAAACGCTGCAAGCAGCAC
EY913397       --> .......ggCACTGATCCTTTCTTTCATCTTCAGACGCTGCAAGCAGCAC
EV567563       --> ........ggACTGATCCTTTCTTTCATCTTCAGACGCTGCAAGCAGCAC
EX746390       --> ........ggACTGATCCTTTCTTTCATCTTCAGACGCTGCAAGCAGCAC
EX746667       --> ........ggACTGATCCTTTCTTTCATCTTCAGACGCTGCAAGCAGCAC
EX773964       --> ........ggACTGATCCTTTCTTTCATCTTCAAACGCTGCAAGCAGCAC
EY908786       --> ........ggACTGATCCTTTCTTTCATCTTCAGACCCTGCAAGCAGCAC
EY933090       --> ........ggACTGATCCTTTCTTTCATCTTCAGACGCTGCAAGCAGCAC
EY947218       --> ........ggACTGATCCTTTCTTTCATCTTCAGACGCTGCAAGCAGCAC
FD563668       --> ........ggACTGATCCTTTCTTTCATCTTCAGACGCTGCAAGCAGCAC
FD940469       --> ........ggACTGATCCTTTCTTTCATCTTCAGACGCTGCAAGCAGCAC
FD534963       --> ...............ggCTTTCTTTCATCTTCAGACGCTGCAAGCAGCAC
FD542690       --> ........................ggATCTTCAGACCCTGCAAGCAGCAC
FD978779       --> ........................ggATCTTCAGACGCTGCAAGCAGCAC
FD979809       --> ........................ggATCTTCAGACGCTGCAAGCAGCAC
EX755909       --> ................................AGACCCTTCAAGCAGCAC
FD946757       --> ...........................aggggAGACGCTGCGAGCAGCAC
FY436714       --> ......................................gtgcAGCAGCAC
FD558199       --> ................................................gg
EY905357       --> ..................................................
EX773866       --> ..................................................
FD532533       --> ..................................................
FD956449       --> ..................................................
EV527501       --> ..................................................

               51     -    101
UN14339        --> ACCACACAAAA-TACAAAATGGCTCAAACCATGCTGCTTACTTCAGGCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958943       <-- ..................................................
FY439244       <-- ..................................................
EX777670       <-- ..................................................
EX759855       <-- ..................................................
FD567324       <-- ..................................................
EY919622       <-- ..................................................
EY909636       <-- ..................................................
EY928657       <-- ..................................................
FD942816       <-- ..................................................
FD936344       <-- ..................................................
EY923887       --> ACCACACAAAA-TACAAAATGGCTCAAACCATGCTGCTTACTTCAGGCGT
EY913397       --> ACCACACAAAA-TACAAAATGGCTCAAACCATGCTGCTTACTTCAGGCGT
EV567563       --> ACCACACAAAA-TACAAAATGGCTCAAACCATGCTGCTTACTTCAGGCGT
EX746390       --> ACCACACAAAA-TACAAAATGGCTCAAACCATGCTGCTTACTTCAGGCGT
EX746667       --> ACCACACAAAA-TACAAAATGGCTCAAACCATGCTGCTTACTTCAGGCGT
EX773964       --> ACCACACAAAA-TACAAAATGGCTCAAACCATACTGCTTACTTCAGGCGT
EY908786       --> ACCACACAAAA-TACAAAATGGCTCAAACCATGCTGCTTACTTCAGGCGT
EY933090       --> ACCACACAAAA-TACAAAATGGCTCAAACCATGCTGCTTACCTCAGGCGT
EY947218       --> ACCACAAAAAA-TACAAAATGGCTCAAACCATGCTGCTTACTTCAGGCGT
FD563668       --> ACCACACAAAA-TACAAAATGGCTCAAACCATGCTGCTTACTTCAGGCGT
FD940469       --> ACCACACAAAA-TACAAAATGGCTCAAACCATGCTGCTTACTTCAGGCGT
FD534963       --> ACCACACAAAA-TACAAAATGGCTCAAACCATGCTGCTTACTTCAGGCGT
FD542690       --> ACCACACAAAA-TACAAAATGGCTCAAACCATGCTGCTTACTTCAGGCGT
FD978779       --> ACCACAAAAAAATACAAAATGGCTCAAACCATGCTGCTTACTTCAGGCGT
FD979809       --> ACCACACAAAA-TACAAAATGGCTCAAACCATGCTGCTTACTTCAGGCGT
EX755909       --> ACCACACAAAA-TACAAAATGGCTCAAACCATGCTGCTTACTTCAGGCGT
FD946757       --> ACCACAAAAAA-TACAAAATGGCTCAAACCATGCTGCTTACTTCAGGCGT
FY436714       --> ACCACACAAAA-TACAAAATGGCTCAAACCATGCTGCTTACTTCAGGCGT
FD558199       --> ACCACACAAAA-TACAAAATGGCTCAAACCATGCTGCTTACTTCAGGCGT
EY905357       --> .....ggAAAA-TACAAAATGGCTCAAACCATGCTGCTTACTTCAGGCGT
EX773866       --> ..................................................
FD532533       --> ..................................................
FD956449       --> ..................................................
EV527501       --> ..................................................

               101    -    151
UN14339        --> CTCTGCAAACCAATTTTTAAGGAACAA---GAACCCTCTCGCTCAGCCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958943       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FY439244       <-- ..................................................  Raphanus sativus cv GSK3-1
EX777670       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX759855       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD567324       <-- ..................................................  Raphanus sativus var. oleiformis
EY919622       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY909636       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928657       <-- ..................................................  Raphanus sativus var. oleiformis
FD942816       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD936344       <-- ..................................................  Raphanus sativus var. oleiformis
EY923887       --> CTCTGCAAACCAATTTTTAAGGAACAA---GAACCCTCTCGCTCAGCCCA  Raphanus raphanistrum subsp. landra
EY913397       --> CTCTGCAAACCAATTTTTAAGGAACAACAAGAACCCTCTCGCTCAGCCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV567563       --> CTCTGCAAACCAATTTTTAAGGAACAA---GAACCCTCTCGCTCAGCCCA  Raphanus raphanistrum subsp. landra
EX746390       --> CTCTGCAAACACTTTTTTAAGGAACAA---GAACCCTCTCGCTCAGCCCA  Raphanus raphanistrum subsp. maritimus
EX746667       --> CTCTGCAAACACTTTTTTAAGGAACAA---GAACCCTCTCGCTCAGCCCA  Raphanus raphanistrum subsp. maritimus
EX773964       --> CTCTGCAAACCAATTTTTAAGGAACAA---GAACCCTCTCGCTCATCCCA  Raphanus raphanistrum subsp. landra
EY908786       --> CTCTGCAAACCAATTTTTA-GGAACAA---GAACCCTCACGCTCAGCCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933090       --> CTCTGCAAACCAATTTTTAAGAAACAT---GAACCCTCTCGCTCAGCCCA  Raphanus sativus var. oleiformis
EY947218       --> CTCTGCCAACCAATTTTTAAGGAACAA---GAACCCTCTCGCTCAGCCCA  Raphanus sativus cv Rat-Tail Radish #3870
FD563668       --> CTCTGCAAACACTTTTTTAAGGAACAA---GAACCCTCTCGCTCAGCCCA  Raphanus sativus var. oleiformis
FD940469       --> CTCTGCAAACACTTTTTTAAGGAACAA---GAACCCTCTCGCTCAGCCCA  Raphanus sativus var. oleiformis
FD534963       --> CTCTGCAAACACTTTTTTAAGGAACAA---GAACCCTCTCGCTCAGCCCA  Raphanus raphanistrum subsp. maritimus
FD542690       --> CTCTGCAAACCAATTTTTAAGGAACAA---GAACCCTCTCGCTCAGCCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978779       --> CTCTGCCAACCAATTTTTAAGGAACAA---GAACCCTCTCGCTCAGCCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979809       --> CTCTGCAAACCAATTTTTAAGGAACAACAAGAACCCTCTCGCTCAGCCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755909       --> CTCTGCAAACCAATTTTTAAGGAACAA---GAACCCTCACGCTCAGCCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946757       --> CTCTGCCAACCAATTTTTAAGGAACAA---GAACCCTCTCGCTCAGCCCA  Raphanus sativus cv Early Scarlet Globe
FY436714       --> CTCTGCAAACCAATTTTTAAGAAACAA---GAACCCTCTCGCTCAGCCCA  Raphanus sativus cv GSK3-1
FD558199       --> CTCTGCAAACCAATTTTTAAGGAACAA---GAACCCTCTCGCTCAGCCCA  Raphanus raphanistrum subsp. landra
EY905357       --> CTCTGCAAACCAATTTTTAAGGAACAA---GAACCCTCACGCTCAGCCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX773866       --> ..................................................  Raphanus raphanistrum subsp. landra
FD532533       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD956449       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV527501       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               151    -    201
UN14339        --> AAGTTCACCATCTCTTCCTCTCGGGAAACTCTCATGTTATTCTACCATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958943       <-- ......ACCATCTCTTCCTCTCGGGAA-CTCTCATGTTATTCTACCATCT  Raphanus raphanistrum subsp. maritimus
FY439244       <-- ..................................................  Raphanus sativus cv GSK3-1
EX777670       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX759855       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD567324       <-- ..................................................  Raphanus sativus var. oleiformis
EY919622       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY909636       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928657       <-- ..................................................  Raphanus sativus var. oleiformis
FD942816       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD936344       <-- ..................................................  Raphanus sativus var. oleiformis
EY923887       --> AAGTTCACCATCTCTTCCTCTCGGGAAACTCTCATGTTATTCTACCATCT  Raphanus raphanistrum subsp. landra
EY913397       --> AAGTTCACCATCTCTTCCTCTCGGGAAACTCTCATGTTGTTCTACCATCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV567563       --> AAGTTCACCATCTCTTCCTCTCGGGAAACTCTCATGTTATTCTACCATCT  Raphanus raphanistrum subsp. landra
EX746390       --> AAGTTCACCATCTCTTCCTCTCGGGAAACTCTCATGTTATTCTACCATCT  Raphanus raphanistrum subsp. maritimus
EX746667       --> AAGTTCACCATCTCTTCCTCTCGGGAAACTCTCATGTTATTCTACCATCT  Raphanus raphanistrum subsp. maritimus
EX773964       --> AAGTTCACCATCTCTTCCTCTCGGGAAACTCTCATGTTATTCTACCATCT  Raphanus raphanistrum subsp. landra
EY908786       --> AAGTTCACCATCTCTTCCTCTCGGGAAACTCTCATGTTGTTCTACCATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933090       --> AAGTTCACCATCTCTTCCTCTCGGGAAACTCTCATGTTATTCTACCATCT  Raphanus sativus var. oleiformis
EY947218       --> AAGTTCACCATCTCTTCCTCTCGGGAAACTCTCATGTTGTTCTACCATCT  Raphanus sativus cv Rat-Tail Radish #3870
FD563668       --> AAGTTCACCATCTCCTCCTCTCGGGAAACTCTCATGTTATTCTACCATCT  Raphanus sativus var. oleiformis
FD940469       --> AAGTTCACCATCTCCTCCTCTCGGGAAACTCTCATGTTATTCTACCATCT  Raphanus sativus var. oleiformis
FD534963       --> AAGTTCACCATCTCTTCCTCTCGGGAAACTCTCATGTTATTCTACCATCT  Raphanus raphanistrum subsp. maritimus
FD542690       --> AAGTTCACCATCTCTTCCTCTCGGGAAACTCTCATGTTGTTCTACCATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978779       --> AAGTTCACCATCTCTTCCTCTCGGGAAACTCTCATGTTGTTCTACCATCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979809       --> AAGTTCACCATCTCTTCCTCTCGGGAAACTCTCATGTTGTTCTACCATCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755909       --> AAGTTCACCATCTCTTCCTCTCGGGAAACTCTCATGTTGTTCTACCATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946757       --> AAGTTCGCCATCTCTTCCTCTCGGGAAACTCTCATGTTGTTCTACCATCT  Raphanus sativus cv Early Scarlet Globe
FY436714       --> AAGTTCACCATCTCTTCCTCTCGGGAAACTCTCATGTTATTCTACCATCT  Raphanus sativus cv GSK3-1
FD558199       --> AAGTTCACCATCTCTTCCTCTCGGGAAACTCTCATGTTATTCTACCATCT  Raphanus raphanistrum subsp. landra
EY905357       --> AAGTTCACCATCTCTTCCTCTCGGGAAACTCTCATGTTGTTCTACCATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX773866       --> ..................................................  Raphanus raphanistrum subsp. landra
FD532533       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD956449       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV527501       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               201    -    251
UN14339        --> CGAAGACCATCATTAGTTCCTCTCGCCATCTTCAAACCCAAAACCAAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958943       <-- CGAAGACCATCATTAGTTCCTCTCGCCATCTTCAAACCCAAAACCAAAGC
FY439244       <-- ..AAGACCATCATTAGTTCCTCTCGCCATCTTCAAACCCAAAACCAAAGC
EX777670       <-- ........................................AAACCAAAGC
EX759855       <-- ..................................................
FD567324       <-- ..................................................
EY919622       <-- ..................................................
EY909636       <-- ..................................................
EY928657       <-- ..................................................
FD942816       <-- ..................................................
FD936344       <-- ..................................................
EY923887       --> CGAAGACCATCATTAGTTCCTCTCGCCATCTTCAAACCCAAAACCAAAGC
EY913397       --> CGAAGACCATCATTAGTTCCTCTCGCCATCTTCAAACCCAAAACCAAAGC
EV567563       --> CGAAGACCATCATTAGTTCCTCTCGCCATCTTCAAACCCAAAACCAAAGC
EX746390       --> CGAAGACCATCATTAGTTCCTCTCGCCATCTTCAAACCCAAAACCAAAGC
EX746667       --> CGAAGACCATCATTAGTTCCTCTCGCCATCTTCAAACCCAAAACCAAAGC
EX773964       --> CGAAGACCATCATTAGTTCCTCTCGCCATCTTCAAACCCAAAACCAAAGC
EY908786       --> CGAAGACCATCATTAGTTCCTCTCGCCATCTTCAAACCCAAAACTAAAGC
EY933090       --> CGAAGACCATCATTAGTTCCTCTCGCCATCTTCAAACCCAAAACCAAAGC
EY947218       --> CGAAGACCATCATTAGTTCCTCTCGCCATCTTCAAACCCAAAACCAAAGC
FD563668       --> CGAAGACCATCATTAGTTCCTCTCGCCATCTTCAAACCCAAAACCAAAGC
FD940469       --> CGAAGACCATCATTAGTTCCTCTCGCCATCTTCAAACCCAAAACCAAAGC
FD534963       --> CGAAGACCATCATTAGTTCCTCTCGCCATCTTCAAACCCAAAACCAAAGC
FD542690       --> CGAAGACCATCATAAGTTCCTCTCGCCATCTTCAAACCCAAAACCAAAGC
FD978779       --> CGAAGACCATCATTAGTTCCTCTCGCCATCTTCAAACCCAAAACCAAAGC
FD979809       --> CGAAGACCATCATTAGTTCCTCTCGCCATCTTCAAACCCAAAACCAGAGC
EX755909       --> CGAAGACCATCATTAGTTCCTCTCGCCATCTTCAAACCCAAAACTAAAGC
FD946757       --> CGAAGACCATCATTAGTTCCTCTCGCCATCTTCAAACCCAAAACCAAAGC
FY436714       --> CGAAGACCATCATTAGTTCCTCTCGCCATCTTCAAACCCAAAACCAAAGC
FD558199       --> CGAAGACCATCATTAGTTCCTCTCGCCATCTTCAAACCCAAAACCGAAGC
EY905357       --> CGAAGACCATCATTAGTTCCTCTCGCCATCTTCAAACCCAAAACTAAAGC
EX773866       --> gGAAGACCATCATTAGTTCCTCTCGCCATCTTCAAACCCAAAACCAAAGC
FD532533       --> ..................................................
FD956449       --> ..................................................
EV527501       --> ..................................................

               251    -    301
UN14339        --> TGCTCCCAAAAAGGTTGAGAAGGTGAAGCCAAAGGTTGAAGACGGTATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958943       <-- TGCTCCCAAAAAGGTTGAGAAGGTGAAGCCAAAGGTTGAAGACGGTATTT  Raphanus raphanistrum subsp. maritimus
FY439244       <-- TGCTCCC---------AAAAAGGTGAAGCCAAAGGTTGAAGACGGTATCT  Raphanus sativus cv GSK3-1
EX777670       <-- TGCTCCCAAAA-GGTTGAGAAGGTGAAGCCAAAGGTTGAAGACGGTATCT  Raphanus raphanistrum subsp. landra
EX759855       <-- .................AGAAGATGAAGCCGAAGGTTGAAGACGGTATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD567324       <-- ..................................................  Raphanus sativus var. oleiformis
EY919622       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY909636       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928657       <-- ..................................................  Raphanus sativus var. oleiformis
FD942816       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD936344       <-- ..................................................  Raphanus sativus var. oleiformis
EY923887       --> TGCTCCCAAAAAGGTTGAGAAGGTGAAGCCAAAGGTTGAAGACGGTATCT  Raphanus raphanistrum subsp. landra
EY913397       --> TGTTCCCAAAAAGGTTGAGAAGGTGAAGCCAAAGGTTGAAGACGGTATCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV567563       --> TGCTCCCAAAAAGGTTGAGAAGGTGAAGCCAAAGGTTGAAGACGGTATCT  Raphanus raphanistrum subsp. landra
EX746390       --> TGCTCCCAAAAAGGTTGAGAAGGTGAAGCCAAAGGTTGAAGACGGTATTT  Raphanus raphanistrum subsp. maritimus
EX746667       --> TGCTCCCAAAAAGGTTGAGAAGGTGAAGCCAAAGGTTGAAGACGGTATTT  Raphanus raphanistrum subsp. maritimus
EX773964       --> TGCTCCCAAAAAGGTTGAGAAGGTGAAGCCAAAGGTTGAAGACGGTATCT  Raphanus raphanistrum subsp. landra
EY908786       --> TGCTCCCAAAAAGGTTGAGAAGGTGAAGCCGAAGGTTGAAGACGGTATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933090       --> TGCTCCCAAAAAGGTTGAGAAGGTGAAGCCAAAGGTTGAAGACGGTATCT  Raphanus sativus var. oleiformis
EY947218       --> TGCTCCCAAAAAGGTTGAGAAGGTGAAGCCAAAGGTTGAAGACAGTATCT  Raphanus sativus cv Rat-Tail Radish #3870
FD563668       --> TGCTCCCAAAAAGGTTGAGAAGGTGAAGCCAAAGGTTGAAGACGGTATTT  Raphanus sativus var. oleiformis
FD940469       --> TGCTCCCAAAAAGGTTGAGAAGGTGAAGCCAAAGGTTGAAGACGGTATTT  Raphanus sativus var. oleiformis
FD534963       --> TGCTCCCAAAAAGGTTGAGAAGGTGAAGCCAAAGGTTGAAGACGGTATTT  Raphanus raphanistrum subsp. maritimus
FD542690       --> TGCTCCCAAAAAGGTTGAGAAGGTGAAGCCGAAGGTTGAAGACGGTATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978779       --> TGCTCCCAAAAAGGTTGAGAAGGTGAAGCCAAAGGTTGAAGACGGTATCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979809       --> TGTTCCCAAAAAGGTTGAGAAGGTGAAGCCAAAGGCTGAAGACGGTATCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755909       --> TGCTCCCAAAAAGGTTGAGAAGATGAAGCCGAAGGTTGAAGACGGTATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946757       --> TGCTCCCAAAAAGGTTGAGAAGGTGAAGCCAAAGGTTGAAGACAGTATCT  Raphanus sativus cv Early Scarlet Globe
FY436714       --> TGCTCCCAAAAAGGTTGAGAAGGTGAAGCCAAAGGTTGAAGACGGTATCT  Raphanus sativus cv GSK3-1
FD558199       --> TGCTCCCAAAAAGGTTGAGAAGGTGAAGCCAAAGGTTGAAGACGGTATCT  Raphanus raphanistrum subsp. landra
EY905357       --> TGCTCCCAAAAAGGTTGAGAAGATGAAGCCGGAGGTTGAAGACGGTATCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX773866       --> TGCTCCCAAAAAGGTTGAGAAGGTGAAGCCAAAGGTTGAAGACGGTATCT  Raphanus raphanistrum subsp. landra
FD532533       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD956449       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV527501       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               301    -    351
UN14339        --> TCGGAACATCTGGTGGGATAGGTTTCACGAAGCAGAACGAGCTCTTTGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958943       <-- TCGGAACATCCGGTGGGATAGGTTTCACGAAGCAGAACGAGCTCTTTGTG
FY439244       <-- TCGGAACATCTGGTGGGATAGGTTTCACGAAGCAGAACGAGCTCTTTGTG
EX777670       <-- TCGGAACATCTGGTGGGATAGGTTTCACGAAGCAGAACGAGCTCTTTGTG
EX759855       <-- TCGGAACATCTGGTGGGATAGGTTTCACGAAGCAGAACGAGCTCTTTGTG
FD567324       <-- ................GATAGGTTTCACGAAGCAGAACGAGCTCTTTGTG
EY919622       <-- ........................TCACGAAGCAGAACGAGCTCTTTGTG
EY909636       <-- .................................AGAACGAGCTCTTTGTG
EY928657       <-- ..................................................
FD942816       <-- ..................................................
FD936344       <-- ..................................................
EY923887       --> TCGGAACATCTGGTGGGATAGGTTTCACGAAGCAGAACGAGCTCTTTGTG
EY913397       --> TCGGAACATCTGGTGGGATAGGTTTCACGAAGCAGAACGAGCTCTTTGTG
EV567563       --> TCGGAACATCTGGTGGGATAGGTTTCACGAAGCAGAACGAGCTCTTTGTG
EX746390       --> TCGGAACATCTGGTGGGATAGGTTTCACGAAGCAGAACGAGCTCTTTGTG
EX746667       --> TCGGAACATCTGGTGGGATAGGTTTCACGAAGCAGAACGAGCTCTTTGTG
EX773964       --> TCGGAACATCTGGTGGGATAGGTTTCACGAAGCAGAACGAGCTCTTTGTG
EY908786       --> TCGGAACATCTGGTGGGATAGGTTTCACGAAGCAGAACGAGCTCTTTGTG
EY933090       --> TCGGAGCATCTGGTGGGATAGGTTTCACGAAGCAGAACGAGCTCTTTGTG
EY947218       --> TCGGAACATCTGGTGGGATAGGTTTCACGAAGCAGAACGAGCTCTTTGTG
FD563668       --> TCGGAACATCTGGTGGGATAGGTTTCACGAAGCAGAACGAGCTCTTTGTG
FD940469       --> TCGGAACATCTGGTGGGATAGGTTTCACGAAGCAGAACGAGCTCTTTGTG
FD534963       --> TCGGAACATCTGGTGGGATAGGTTTCACGAAGCAGAACGAGCTCTTTGTG
FD542690       --> TCGGAACATCTGGTGGGATAGGTTTCACGAAGCAGAACGAGCTCTTTGTG
FD978779       --> TCGGAACATCTGGTGGGATAGGTTTCACGAAGCAGAACGAGCTCTTTGTG
FD979809       --> TCGGAACATCTGGTGGGATAGGTTTCACGAAGCAGAACGAGCTCTTTGTG
EX755909       --> TCGGAACATCTGGTGGGATAGGTTTCACGAAGCAGAACGAGCTCTTTGTG
FD946757       --> TCGGAACATCTGGTGGGATAGGTTTCACGAAGCAGAACGAGCTCTTTGTG
FY436714       --> TCGGAACATCTGGTGGGATAGGTTTCACGAAGCAGAACGAGCTCTTTGTG
FD558199       --> TCGGAACATCTGGTGGGATAGGTTTCACGAAGCAGAACGAGCTCTTTGTG
EY905357       --> TCGGAACATCTGGTGGGATAGGCTTCACGAAGCAGAACGAGCTCTTTGTG
EX773866       --> TCGGAACATCTGGTGGGATAGGTTTCACGAAGCAGAACGAGCTCTTTGTG
FD532533       --> ..................................................
FD956449       --> ..................................................
EV527501       --> ..................................................

               351    -    401
UN14339        --> GGTCGTGTTGCTATGATCGGTTTTGCTGCATCGTTGCTGGGTGAGGCGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958943       <-- GGTCGTGTTGCTATGATCGGTTTCGCTGCATCGTTGCTGGGTGAGGCGTT  Raphanus raphanistrum subsp. maritimus
FY439244       <-- GGTCGTGTTGCTATGATCGGTTTTGCTGCATCGTTGCTGGGTGAGGCGTT  Raphanus sativus cv GSK3-1
EX777670       <-- GGTCGTGTTGCTATGATCGGTTTCGCTGCATCGTTGCTGGGTGAGGCGTT  Raphanus raphanistrum subsp. landra
EX759855       <-- AGTCGTGTTGCTATGATCGGTTTTGCGGCATCGTTGCTAGGTGAAGCGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD567324       <-- GGTCGTGTTGCTATGATCGGTTTCGCTGCATCGTTGCTGGGTGAGGCGTT  Raphanus sativus var. oleiformis
EY919622       <-- GGTCGTGTTGCTATGATCGGTTTCGCTGCATCGTTGCTGGGTGAGGCGTT  Raphanus raphanistrum subsp. landra
EY909636       <-- GGTCGTGTTGCTATGATCGGTTTTGCTGCATCGTTGCTGGGTGAGGCGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928657       <-- ..................................................  Raphanus sativus var. oleiformis
FD942816       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD936344       <-- ..................................................  Raphanus sativus var. oleiformis
EY923887       --> GGTCGTGTTGCTATGATCGGTTTCGCTGCATCGTTGCTGGGTGAGGCGTT  Raphanus raphanistrum subsp. landra
EY913397       --> GGTCGTGTTGCTATGATCGGTTTTGCTGCATCGTTGCTGGGTGAGGCGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV567563       --> GGTCGTGTTGCTATGATCGGTTTTGCTGCATCGTTGCTGGGTGAGGCGTT  Raphanus raphanistrum subsp. landra
EX746390       --> GGTCGTGTTGCTATGATCGGTTTCGCTGCATCGTTGCTGGGTGAGGCGTT  Raphanus raphanistrum subsp. maritimus
EX746667       --> GGTCGTGTTGCTATGATCGGTTCCGCTGCATCGTTGCTGGGTGAGGCTTT  Raphanus raphanistrum subsp. maritimus
EX773964       --> GGTCGTGTTGCTATGATCGGTTTCGCTGCATCGTTGCTGGGTGAGGCGTT  Raphanus raphanistrum subsp. landra
EY908786       --> GGTCGTGTTGCTATGATCGGTTTTGCGGCATCGTTGCTAGGTGAAGCGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933090       --> GGTCGTGTTGCTATGATCGGTTTTGCTGCATCGTTGCTGGGTGAGGCGTT  Raphanus sativus var. oleiformis
EY947218       --> GGTCGTGTTGCTATGATCGGTTTTGCTGCATCGTTGCTGGGTGAGGCGTT  Raphanus sativus cv Rat-Tail Radish #3870
FD563668       --> GGTCGTGTTGCTATGATCGGTTTCGCTGCATCGTTGCTGGGTGAGGCGTT  Raphanus sativus var. oleiformis
FD940469       --> GGTCGTGTTGCTATGATCGGTTTCGCTGCATCGTTGCTGGGTGAGGCGTT  Raphanus sativus var. oleiformis
FD534963       --> GGTCGTGTTGCTATGATCGGTTTCGCTGCATCGTTGCTGGGTGAGGCGTT  Raphanus raphanistrum subsp. maritimus
FD542690       --> GGTCGTGTTGCTATGATCGGTTTTGCTGCATCGTTGCTGGGTGAGGCGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978779       --> GGTCGTGTTGCTATTATCGGTTTTGCTGCATCGTTGCTGGGTGAGGCGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979809       --> GGTCGTGTTGCTATGATCGGTTTTGCTGCATCGTTGCTGGGTGAGGCGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755909       --> AGTCGTGTTGCTATGATCGGTTTTGCGGCATCGTTGCTAGGTGAAGCGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946757       --> GGTCGTGTTGCTATGATCGGTTTTGCTGCATCGTTGCTGGGTGAGGCGTT  Raphanus sativus cv Early Scarlet Globe
FY436714       --> GGTCGTGTTGCTATGATCGGTTTTGCTGCATCGTTGCTGGGTGAGGCGTT  Raphanus sativus cv GSK3-1
FD558199       --> GGTCGTGTTGCTATGATCGGTTTCGCTGCATCGTTGCTGGGTGAGGCGTT  Raphanus raphanistrum subsp. landra
EY905357       --> GGTCGTGTTGCTATGATCGGTTTTGCGGCATCGTTGCTAGGTGAAGCGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX773866       --> GGTCGTGTTGCTATGATCGGTTTCGCTGCATCGTTGCTGGGTGAGGCGTT  Raphanus raphanistrum subsp. landra
FD532533       --> ...........................agggCGTTGCTGGGTGAGGCGTT  Raphanus raphanistrum subsp. maritimus
FD956449       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV527501       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               401    -    451
UN14339        --> GACAGGGAAAGGTATATTAGCACAGTTGAATCTGGAGACAGGGATACCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958943       <-- GACAGGGAAAGGTATATTAGCACAGTTGAATCTGGAGACAGGGATACCGA  Raphanus raphanistrum subsp. maritimus
FY439244       <-- GACAGGGAAAGGTATATTAGCACAGTTGAATCTGGAGACGGGGATACCGA  Raphanus sativus cv GSK3-1
EX777670       <-- GACAGGGAAAGGTATATTAGCACAGTTGAATCTGGAGACAGGGATACCGA  Raphanus raphanistrum subsp. landra
EX759855       <-- GACAGGGAAAGGTATATTAGCACAGTTGAATCTGGAGACAGGGATACCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD567324       <-- GACAGGGAAAGGTATATTAGCACAGTTGAATCCGGAGACAGGGATACCGA  Raphanus sativus var. oleiformis
EY919622       <-- GACAGGGAAAGGTATATTAGCACAGTTGAATCTGGAGACAGGGATACCGA  Raphanus raphanistrum subsp. landra
EY909636       <-- GACAGGGAAAGGTATATTAGCACAGTTGAATCTGGAGACAGGGATACCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928657       <-- ..................................................  Raphanus sativus var. oleiformis
FD942816       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD936344       <-- ..................................................  Raphanus sativus var. oleiformis
EY923887       --> GACAGGGAAAGGTATATTAGCACAGTTGAATCTGGAGACAGGGATACCGA  Raphanus raphanistrum subsp. landra
EY913397       --> GACAGGGAAAGGTATATTAGCACAGTTGAATCTGGAGACAGGGATACCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV567563       --> GACAGGGAAAGGTATATTAGCACAGTTGAATCTGGAGACAGGGATACCGA  Raphanus raphanistrum subsp. landra
EX746390       --> GACAGGGAAAGGTATATTAGCACAGTTGAATCTGGAGACAGGGATACCGA  Raphanus raphanistrum subsp. maritimus
EX746667       --> GACAGGGAAAGGTATATTAGCACAGTTGAGTCTGGAGACAGGGATACCGA  Raphanus raphanistrum subsp. maritimus
EX773964       --> GACAGGGAAAGGTATATTAGCACAGTTGAATCTGGAGACAGGGATACCGA  Raphanus raphanistrum subsp. landra
EY908786       --> GACAGGGAAAGGTATATTAGCACAGTTGAATCTGGAGACAGGGATACCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933090       --> GACAGGGAAAGGTATATTAGCACAGTTGAATCTGGAGACGGGGATACCGA  Raphanus sativus var. oleiformis
EY947218       --> GACAGGGAAAGGTATATTAGCACAGTTGAATCTGGAGACGGGGATACCGA  Raphanus sativus cv Rat-Tail Radish #3870
FD563668       --> GACAGGGAAAGGTATATTAGCACAGTTGAATCCGGAGACAGGGATACCGA  Raphanus sativus var. oleiformis
FD940469       --> GACAGGGAAAGGTATATTAGCACAGTTGAATCCGGAGACAGGGATACCGA  Raphanus sativus var. oleiformis
FD534963       --> GACAGGGAAAGGTATATTAGCACAGTTGAATCTGGAGACAGGGATACCGA  Raphanus raphanistrum subsp. maritimus
FD542690       --> GACAGGGAAAGGTATATTAGCACAGTTGAATCTGGAGACAGGGATACCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978779       --> GACAGGGAAAGGTATATTAGCACAGTTGAATCTGGAGACGGGGATACCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979809       --> GACAGGGAAAGGTATATTAGCACAGTTGAATCTGGAGACAGGGATACCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755909       --> GACAGGGAAAGGTATATTAGCACAGTTGAATCTGGAGACAGGGATACCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946757       --> GACAGGGAAAGGTATATTAGCACAGTTGAATCTGGAGACGGGGATACCGA  Raphanus sativus cv Early Scarlet Globe
FY436714       --> GACAGGGAAAGGTATATTAGCACAGTTGAATCTGGAGACGGGGATACCGA  Raphanus sativus cv GSK3-1
FD558199       --> GACAGGGAAAGGTATATTAGCACAGTTGAATCTGGAGACAGGGATACCGA  Raphanus raphanistrum subsp. landra
EY905357       --> GACAGG-AAAGGTATATTAGCACAGTTGAATCTGGAGACAGGGATACCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX773866       --> GACAGGGAAAGGTATATTAGCACAGTTGAATCTGGAGACAGGGATACCGA  Raphanus raphanistrum subsp. landra
FD532533       --> GACAGGGAAAGGTATATTAGCACAGTTGAATCTGGAGACAGGGATACCGA  Raphanus raphanistrum subsp. maritimus
FD956449       --> ..gAGGGAAAGGTATATTAGCACAGTTGAATCTGGAGACGGGGATACCGA  Raphanus sativus cv Rat-Tail Radish #3870
EV527501       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               451    -    501
UN14339        --> TTTACGAAGCAGAGCCATTGCTTCTCTTCTTCATATTGTTCACTCTGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958943       <-- TTTACGAAGCAGAGCCATTGCTTTTCTTCTTCATATTGTTCACTCTGTTG
FY439244       <-- TTTACGAAGCAGAGCCATTGCTTCTCTTCTTCATATTGTTCACTCTGTTG
EX777670       <-- TTTACGAAGCAGAGCCATTGCTTCTCTTCTTCATATTGTTCACTCTGTTA
EX759855       <-- TTTACGAAGCAGAGCCATTGCTTCTCTTCTTCATATTGTTCACTCTGTTG
FD567324       <-- TTTACGAAGCAGAGCCATTGCTTCTCTTCTTCATATTGTTCACTCTGTTG
EY919622       <-- TTT--AAAGCAGAGCCATTGCTTCTCTTCTTCATATTGTTCACTCTGTTG
EY909636       <-- TTTACGAAGCAGAGCCATTGCTTCTCTTCTTCATATTGTTCACTCTGTTG
EY928657       <-- ..........................................CTCTGTTG
FD942816       <-- ..........................................CTCTGTTG
FD936344       <-- ..................................................
EY923887       --> TTTA--AAGCAGAGCCATTGCTTCTCTTCTTCATATTGTTCACTCTGTTG
EY913397       --> TTTACGAAGCAGAGCCATTGCTTCTCTTCTTCATATTGTTCACTCTGTTG
EV567563       --> TTTACGAAGCAGAGCCATTGCTTCTCTTCTTCATTTTGTTCACTCTGTTG
EX746390       --> TTTACGAAGCGGAGCCATTGCTTCTCTTCTTCATATTGTTCACTCTGTTG
EX746667       --> TTTACGAAGCAGAGCCATTGCTTCTCTTCTTCATATTGTTCACTCTGTTG
EX773964       --> TTTACGAAGCAGAGCCATTGCTTCTCTTCTTCATATTGTTCACTCTGTTG
EY908786       --> TTTACGAAGCAGAGCCATTGCTTCTCTTCTTCATATTGTTCACTCTGTTG
EY933090       --> TTTACGAAGCAGAGCCATTGCTTCTCTTCTTCATATTGTTCACTCTGTTG
EY947218       --> TTTACGAAGCAGAGCCATTGCTTCTCTTCTTCATATTGTTCACTCTGTTG
FD563668       --> TTTACGAAGCAGAGCCATTGCTTCTCTTCTTCATATTGTTCACTCTGTTG
FD940469       --> TTTACGAAGCAGAGCCATTGCTTCTCTTCTTCATATTGTTCACTCTGTTG
FD534963       --> TTTACGAAGCAGAGCCATTGCTTCTCTTCTTCATATTGTTCACTCTGTTG
FD542690       --> TTTACGAAGCAGAGCCGTTGCTTCTCTTCTTCATATTGTTCACTCTGTTG
FD978779       --> TTTACGAAGCAGAGCCATTGCTTCTCTTCTTCATTTTGTTCACTCTGTTG
FD979809       --> TTTACGAAGCAGAGCCATTGCTTCTCTTCTTCATATTGTTCACTCTGTTG
EX755909       --> TTTACGAAGCAGAGCCATTGCTTCTCTTCTTCATATTGTTCACTCTGTTG
FD946757       --> TTTACGAAGCAGAGCCATTGCTTCTCTTCTTCATATTGTTCACTCTGTTG
FY436714       --> TTTACGAAGCAGAGCCATTGCTTCTCTTCTTCATATTGTTCACTCTGTTG
FD558199       --> TTTACGAAGCAGAGCCATTGCTTCTCTTCTTCATATTGTTCACTCTGTTG
EY905357       --> TTTACGAAGCAGAGCCATTGCTTCTCTTCTTCATATTGTTCACTCTGTTG
EX773866       --> TTTACGAAGCAGAGCCATTGCTTCTCTTCTTCATATTGTTCACTCTGTTA
FD532533       --> TTTACGAAGCAGAGCCATTGCTTCTCTTCTTCATATTGTTCACTCTGTTG
FD956449       --> TTTACGAAGCAGAGCCGTTGCTTCTCTTCTTCATATTGTTCACTCTGTTG
EV527501       --> ..................................................

               501    -    551
UN14339        --> GGTGCTATCGGAGCTCTTGGGGACAGAGGAAAATTCGTCGACGATCCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958943       <-- GGTGCTATCGGAGCTCTTGGGGACAGAGGAAAATTCGTCGACGATCCTCC
FY439244       <-- GGTGCTATCGGAGCTCTTGGGGACAGAGGAAAATTCGTCGACGATCCTCC
EX777670       <-- GGTGCTATCGGAGCTCTTGGGGACAGAGGAAAATTCGTCGACGATCCTCC
EX759855       <-- GGTGCTATCGGAGCTCTTGGGGACAGAGGAAAATTCGTCGACGATCCTCC
FD567324       <-- GGTGCTATCGGAGCTCTTGGGGACAGAGGAAAATTCGTCGACGATCCTCC
EY919622       <-- GGTGCTATCGGAGCTCTTGGGGACAGAGGAAAATTCGTCGACGATCCTCC
EY909636       <-- GGTGCTATCGGAGCTCTTGGGGACAGAGGAAAATTCGTCGACGATCCTCC
EY928657       <-- GGTGCTATCGGAGCTCTTGGGGACAGAGGAAAATTCGTCGACGATCCTCC
FD942816       <-- GGTGCTATCGGAGCTCTTGGGGACAGAGGAAAATTCGTCGACGATCCTCC
FD936344       <-- ..................................................
EY923887       --> GGTGCTATCGGAGCTCTTGGGGACAGAGGAAAATTCGTCGACGATCCTCC
EY913397       --> GGTGCTATCGGAGCTCTTGGGGACAGAGGAAA-TTCGTCGACGATCCTCC
EV567563       --> GGTGCTATCGGAGCTCTTGGGGACAGAGGAAAATTCGTCGACGATCCTCC
EX746390       --> GGTGCTATCGGAGCTCTTGGGGACAGAGGAAAATTCGTCGACGATCCTCC
EX746667       --> GGTGCTATCGGAGCTCTTGGGGACAGAGGAAAATTCGTCGACGATCCTCC
EX773964       --> GGTGCTATCGGAGCTCTTGGGGACAGAGGAAAATTCGTCGACGATCCTCC
EY908786       --> GGTGCTATCGGAGCTCTTGGGGACAGAGGAAA-TTCGTCGACGATCCTCC
EY933090       --> GGTGCTATCGGAGCTCTTGGGGACAGAGGAAAATTCGTCGACGATCCTCC
EY947218       --> GGTGCTATCGGAGCTCTTGGGGACAGAGGAAAATTCGTCGACGATCCTCC
FD563668       --> GGTGCTATCGGAGCTCTTGGGGACAGAGGAAAATTCGTCGACGATCCTCC
FD940469       --> GGTGCTATCGGAGCTCTTGGGGACAGAGGAAAATTCGTCGACGATCCTCC
FD534963       --> TGTGCTATCGGAGCTCTTGGGGACAGAGGAAAATTCGTCGACGATCCTCC
FD542690       --> GGTGCTATCGGAGCTCTTGGGGACAGAGGAAAATTCGTCGACGATCCTCC
FD978779       --> GGTGCTATCGGAGCTCTTGGGGACAGAGGAAAATTCGTCGACGATCTTCC
FD979809       --> GGTGCTATCGGAGCTCTTGGGGACGGAGGAAAATTCGTCGACGATCCTCC
EX755909       --> GGTGCTATCGGAGCTCTTGGGGACAGAGGAAAATTCGTCGACGATCCTCC
FD946757       --> GGTGCTATCGGAGCTCTTGGGGACAGAGGAAAATTCGTCGACGATCCTCC
FY436714       --> GGTGCTATCGGAGCTCTTGGGGACAGAGGAAAATTCGTCGACGATCCTCC
FD558199       --> GGTGCTATCGGAGCTCTTGGGGACAGAGGAAAATTCGTCGACGATCCTCC
EY905357       --> GGTGCTATCGGAGCTCTTGGGGACAGAGGAAAATTCGTCGACGATCCTCC
EX773866       --> GGTGCTATCGGAGCTCTTGGGGACAGAGGAAAATTCGTCGACGATCCTCC
FD532533       --> GGTGCTATCGGAGCTCTTGGGGACAGAGGAAAATTCGTCGACGATCCTCC
FD956449       --> GGTGCTATCGGAGCTCTTGGGGACAGAGGAAAATTCGTCGACGATCCTCC
EV527501       --> ..................................................

               551    -    601
UN14339        --> CACCGGACTTGAGAAAGCCGTCATTCCTCCCGGCAAAGGCGTCCGATCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958943       <-- CACCGGACTTGAGAAAGCCGTCATTCCTCCCGGCAAAGGCGTCCGATCTG  Raphanus raphanistrum subsp. maritimus
FY439244       <-- CACCGGACTTGAGAAAGCCGTCATTCCTCCCGGCAAAGGCGTCCGATCTG  Raphanus sativus cv GSK3-1
EX777670       <-- CACCGGACTTGAGAAAGCCGTCATTCCTCCCGGCAAAGGCGTCCGCTCTG  Raphanus raphanistrum subsp. landra
EX759855       <-- CACCGGACTTGAGAAAGCCGTCATTCCTCCCGACAAAGGCGTCCGATCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD567324       <-- CACCGGACTTGAGAAAGCCGTCATTCCTCCCGGCAAAGGCGTCCGATCTG  Raphanus sativus var. oleiformis
EY919622       <-- CACCGGACTTGAGAAAGCCGTCATTCCTCCCGGCAAAGGCGTCCGCTCTG  Raphanus raphanistrum subsp. landra
EY909636       <-- CACCGGACTTGAGAAAGCCGTCATTCCTCCCGGCAAAGGCATCCGATCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928657       <-- CACCGGACTTGAGAAAGCCGTCATTCCTCCCGGCAAAGGCGTCCGATCTG  Raphanus sativus var. oleiformis
FD942816       <-- CACCGGACTTGAGAAAGCCGTCATTCCTCCCGGCAAAGGCGTCCGATCTG  Raphanus sativus cv Early Scarlet Globe
FD936344       <-- ..................................................  Raphanus sativus var. oleiformis
EY923887       --> CACCGGACTTGAGAAAGCCGTCATTCCTCCCGGCAAAGGCGTCCGCTCTG  Raphanus raphanistrum subsp. landra
EY913397       --> CACCGGACTTGAGAAAGCCGTCATTCCTCCCGGCAAAGGCATCCGATCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV567563       --> CACTGGACTTGAGAAAGCCGTCATTCCTCCCGGCAAAGGCGTCCGCTCTG  Raphanus raphanistrum subsp. landra
EX746390       --> CACCGGACTTGAGAAAGCCGTCATTCCTCCCGGCAAAGGCGTCCGATCTG  Raphanus raphanistrum subsp. maritimus
EX746667       --> CACCGGACTTGAGAAAGCCGTCATTCCTCCCGGCAAAGGCGTCCGATCTG  Raphanus raphanistrum subsp. maritimus
EX773964       --> CACCGGACTTGAGAAAGCCGTCATTCCTCCCGGC................  Raphanus raphanistrum subsp. landra
EY908786       --> CACCGGA-TTGAGA....................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933090       --> CACCGGACTTGAGAAAGCCGTCATTCCTCCCGGCAAAGGCGTCCGATCTG  Raphanus sativus var. oleiformis
EY947218       --> CACCGGACTTGAGAAAGCCGTCATTCCTCCCGGC................  Raphanus sativus cv Rat-Tail Radish #3870
FD563668       --> CACCGGACTTGAGAAAGCCGTCATTCCTCCCGGCAAAGGCGTCCGATCTG  Raphanus sativus var. oleiformis
FD940469       --> CACCGGACTTGAGAAAGCCGTCATTCCTCCCGGCAAAGGCGTCCGATCTG  Raphanus sativus var. oleiformis
FD534963       --> CACCGGACTTGAGAAAGCCGTCATTCCTCCCGGCAAAGGCGTCCGATCTG  Raphanus raphanistrum subsp. maritimus
FD542690       --> CACCGGACTTGAGAAAGCCGTCATTCCTCCCGGCAAAGGCGTCCGATCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978779       --> CACCGGACTTGAGAAAGCCGTCATTCCTCCCGGCAAAGGCGTCCGATCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979809       --> CACCGGACTTGAGAAAGCCGTCATTCCTCCCGGCAAAGGCGTCCGATCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755909       --> CACCGGACTTGAGAAAGCCGTCATTCCTCCCGACAAAGGCGTCCGATCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946757       --> CACCGGACTTGAGAAAGCCGTCATTCCTCCCGGCAAAGGCGTCCGATCTG  Raphanus sativus cv Early Scarlet Globe
FY436714       --> CACCGGACTTGAGAAAGCCGTCATTCCTCCCGGCAAAGGCGTCCGATCTG  Raphanus sativus cv GSK3-1
FD558199       --> CACCGGACTTGAGAAAGCCGTCATTCCTCCCGGCAAAGGCGTCCGCTCTG  Raphanus raphanistrum subsp. landra
EY905357       --> CACCGGACTTGAGAAAGCCGTCATTCCTCCCGGCAAAGGCGTCCGATCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX773866       --> CACCGGACTTGAGAAAGCCGTCATTCCTCCCGGCAAAGGCGTCCGCTCTG  Raphanus raphanistrum subsp. landra
FD532533       --> CACCGGACTTGAGAAAGCCGTCATTCCTCCCGGCAAAGGCGTCCGATCTG  Raphanus raphanistrum subsp. maritimus
FD956449       --> CACCGGACTTGAGAAAGCCGTCATTCCTCCCGGCAAAGGCGTCCGATCTG  Raphanus sativus cv Rat-Tail Radish #3870
EV527501       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               601    -    651
UN14339        --> CCCTCGGTCTTAAAGAACAAGGTCCATTGTTTGGGTTCACGAAGGCAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958943       <-- CCCTCGGTCTTAAAGAACAAGGTCCATTTTTTGGGTTCACGAAGGCAAAC  Raphanus raphanistrum subsp. maritimus
FY439244       <-- CCCTCGGTCTTAAAGAACAAGGTCCGTTGTTTGGGTTCACGAAGGCAAAC  Raphanus sativus cv GSK3-1
EX777670       <-- CCCTCGGTCTTAAAGAACAAGGTCCATTGTTTGGGTTCACGAAGGCAAAC  Raphanus raphanistrum subsp. landra
EX759855       <-- CCCTCGGTCTTAAAGAACAAGGTCCATTGTTTGGGTTCACGAAGGCAAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD567324       <-- CCCTCGGTCTTAAAGAACAAGGTCCATTGTTTGGGTTCACGAAGGCAAAC  Raphanus sativus var. oleiformis
EY919622       <-- CCCTCGGTCTTAAAGAACAAGGTCCATTGTTTGGGTTCACGAAGGCAAAC  Raphanus raphanistrum subsp. landra
EY909636       <-- CCCTCGGTCTTAAAGAACAAGGTCCATTGTTTGGGTTCACGAAGGCAAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928657       <-- CCCTCGGTCTTAAAGAACAAGGTCCGTTGTTTGGGTTCACGAAGGCAAAC  Raphanus sativus var. oleiformis
FD942816       <-- CCCTCGGTCTTAAAGAACAAGGTCCGTTGTTTGGGTTCACGAAGGCAAAC  Raphanus sativus cv Early Scarlet Globe
FD936344       <-- ..................................................  Raphanus sativus var. oleiformis
EY923887       --> CCCTCGGTCTTAAAGAACAAGGTCCATTGTTTGGGTTCACGAAG-CAAAC  Raphanus raphanistrum subsp. landra
EY913397       --> CCCTCGGTCTTAAAGA..................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV567563       --> CCCTCGGTCTTAAAGAACAAGGTCCATTGTTTGGGTTCACGAAGGCAAAC  Raphanus raphanistrum subsp. landra
EX746390       --> CCCTCGGTCTTAAAGAACAAGGTCCATTGTTTGGGTTCACGAAAGCAAAC  Raphanus raphanistrum subsp. maritimus
EX746667       --> CCCTCGGTCTTAAAGAACAAGGTCCATTGTTTGGGTTCACGAAG-CAAAC  Raphanus raphanistrum subsp. maritimus
EX773964       --> ..................................................  Raphanus raphanistrum subsp. landra
EY908786       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933090       --> CCCTCGGTCTTAAAGA..................................  Raphanus sativus var. oleiformis
EY947218       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD563668       --> CCCTCGGTCTTAAAGAACAAG-TCCATTGTTTGGGTTCAC..........  Raphanus sativus var. oleiformis
FD940469       --> CCCTCGGTCTTAAAGAACAAG-TCCATTGTTTGGGTTCACGAAAGCAAAC  Raphanus sativus var. oleiformis
FD534963       --> CCCTCGGTCTTAAAGAACAAGGTCCATTGTTTGGGTTCACGAAGGCAAAC  Raphanus raphanistrum subsp. maritimus
FD542690       --> CCCTCGGTCTTAAAGAACAAGGTCCATTGTTTGGGTTCACGAAGGCAAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978779       --> CCCTCGGTCTTAAAGAACAAGGTCCGTTGTTTGGGTTCACGA........  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979809       --> CCCTCGGTCTTAAAGAACAAGGTCCATTGTTTGGGTTCACGAAGGCAAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755909       --> CCCTCGGTCTTAAAGAACAAGGTCCATTGTTTGGGTTCACGAAG-CAAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946757       --> CCCTCGGTCTTAAAGAACAAGGTCCGTTGTTTGGGTTCACGAAGGCAAAC  Raphanus sativus cv Early Scarlet Globe
FY436714       --> CCCTCGGTCTTAAAGAACAAGGTCCGTTGTTTGGGTTCACGAAGGCAAAC  Raphanus sativus cv GSK3-1
FD558199       --> CCCTCGGTCTTAAAGA..................................  Raphanus raphanistrum subsp. landra
EY905357       --> CCCTCGGTCTTAAAGAACAAGGTCCATTGTTTGGGTTCACGAAAGCAAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX773866       --> CCCTCGGTCTTAAAGAACAAGGTCCATTGTTTGGGTTCACGAAGGCAAAC  Raphanus raphanistrum subsp. landra
FD532533       --> CCCTCGGTCTTAAAGAACAAGGTCCATTGTTTGGGTTCACGAAGGCAAAC  Raphanus raphanistrum subsp. maritimus
FD956449       --> CCCTCGGTCTTAAAGAACAAGGTCCGTTGTTTGGGTTCACGAAGGCAAAC  Raphanus sativus cv Rat-Tail Radish #3870
EV527501       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               651    -    701
UN14339        --> GAGTTGTTCGTAGGAAGATTGGCACAGTTGGGAATAGCATTTTCATTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958943       <-- GAGTTGTTCGTAGGAAGATTGGTACAGTTGGGAATAGCATTTTCATTGAT
FY439244       <-- GAGTTGTTCGTAGGAAGATTGGCACAGTTGGGAATAGCATTTTCATTGAT
EX777670       <-- GAGTTGTTCGTAGGAAGATTGGCACAGTTGGGAATAGCATTTTCATTGAT
EX759855       <-- GAGTTGTTCGTAGGAAGATTGGCACAGTTGGGAATAGCATTTTCATTGAT
FD567324       <-- GAGTTGTTCGTAGGAAGATTGGCACAGTTGGGAATAGCATTTTCATTGAT
EY919622       <-- GATTTGTTCGTAGGAAGATTGGCACAGTTGGGAATAGCATTTTCATTGAT
EY909636       <-- GAGTTGTTCGTAGGAAGATTGGCACAGTTGGGAATAGCATTTTCATTGAT
EY928657       <-- GAGTTGTTCGTAGGAAGATTGGCACAGTTGGGAATAGCATTTTCATTGAT
FD942816       <-- GAGTTGTTCGTAGGAAGATTGGCACAGTTGGGAATAGCATTTTCATTGAT
FD936344       <-- ..................................................
EY923887       --> GATTTGTTCGT.......................................
EY913397       --> ..................................................
EV567563       --> GAGTTGTTCGTAGGAAGATTGGCACAGTTGGGAATAGCATTTTCATTGAT
EX746390       --> GAGTTGTTCGTATGAAGATTGGCACAGTTGGGAATAGCATTTTCATTGAT
EX746667       --> GAGTTGTTCGTATGAAGATTGGCACAGTTGGGAATAGCATTTTCATTGAT
EX773964       --> ..................................................
EY908786       --> ..................................................
EY933090       --> ..................................................
EY947218       --> ..................................................
FD563668       --> ..................................................
FD940469       --> GAGTTGTTCGTAG-AAGATTGGCACAGTTGGGAATAGCATTTTCATTG..
FD534963       --> GAGTTGTTC.........................................
FD542690       --> GAGTTGTTCGTAGGAAGATTGGCACAGTTGGGAATAGCATTTTCATTGAT
FD978779       --> ..................................................
FD979809       --> GAGTTGTTCGTAG-AAGATTGGCACAGTTGGGAATAGCATTTTCATTGAT
EX755909       --> GAGTTGTTCGTAG-AAGATTGGCACAGTTGGGA-TAGCATTTTCATTGAT
FD946757       --> GAGTTGTTCGTAGGAAGATTGGCACAGTTGGGAATAGCATTTTCATTGAT
FY436714       --> GAGTTGTTCGTAGGAAGATTGGCACAGTTGGGAATAGCATTTTCATTGAT
FD558199       --> ..................................................
EY905357       --> GAGTTGTTC.........................................
EX773866       --> GAGTTGTTCGTAGGAAGATTGGCACAGTTGGGAATAGCATTTTCATTGAT
FD532533       --> GAGTTGTTCGTAGGAAGATTGGCACAGTTGGGAATAGCATTTTCATTGAT
FD956449       --> GAGTTGTTCGTAGGAAGATTGGCACAGTTGGGAATAGCATTTTCATTGAT
EV527501       --> ..................................................

               701    -    751
UN14339        --> AGGAGAGATTATAACCGGGAAAGGAGCATTGGCTCAACTCAACATTGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958943       <-- AGGAGAGATTATAACCGGGAAAGGAGCATTGGCTCAACTCAACATTGAGA
FY439244       <-- AGGAGAGATTATAACCGGGAAAGGAGCATTGGCTCAACTCAACATTGAGA
EX777670       <-- AGGAGAGATTATAACCGGGAAAGGAGCATTGGCTCAACTCAACATTGAGA
EX759855       <-- AGGAGAGATTATAACCGGGAAAGGAGCATTGGCTCAACTCAACATTGAGA
FD567324       <-- AGGAGAGATTATAACCGGGAAAGGAGCATTGGCTCAACTCAACATTGAGA
EY919622       <-- AGGAGAGATTATAACCGGGAAAGGAGCATTGGCTCAACTCAACATTGAGA
EY909636       <-- AGGAGAGATTATAACCGGGAAAGGAGCATTGGCTCAACTCAACATTGAGA
EY928657       <-- AGGAGAGATTATAACCGGGAAAGGAGCATTGGCTCAACTCAACATTGAGA
FD942816       <-- AGGAGAGATTATAACCGGGAAAGGAGCATTGGCTCAACTCAACATTGAGA
FD936344       <-- ..................................................
EY923887       --> ..................................................
EY913397       --> ..................................................
EV567563       --> AGGAGAGATTATAACCGGGAAAGGAGCATTGGCTCAACTCAACATTGAGA
EX746390       --> AGGAGAGATTATAACCGGGAAAGGAGCATTGGCTCAACTCAACATTGAGA
EX746667       --> AGGAGAGA..........................................
EX773964       --> ..................................................
EY908786       --> ..................................................
EY933090       --> ..................................................
EY947218       --> ..................................................
FD563668       --> ..................................................
FD940469       --> ..................................................
FD534963       --> ..................................................
FD542690       --> AGGAGAGATTATAACCGGGAAAGGAGCATTGGCTCAACTCAACATTGAGA
FD978779       --> ..................................................
FD979809       --> AGGAGA............................................
EX755909       --> AGGAGAGAT-ATAACCGGGAAAGGAGCATTGGCTCA-CTC-ACATTGAGA
FD946757       --> AGGAGAGAT-ATAACCGGGAAAGGAGCATTGGCTCAACTCAACATTGAGA
FY436714       --> AGGAG.............................................
FD558199       --> ..................................................
EY905357       --> ..................................................
EX773866       --> AGGAGAGATTATAACCGGGAAAGGAGCATTGGCTCAACTCAACATTGAGA
FD532533       --> AGGAGAGATTATAACCGGGAAAGGAGCATTGGCTCAACTCAACATTGAGA
FD956449       --> AGGAGAGATTATAACCGGGAAAGGAGCATTGGCTCAACTCAACATTGAGA
EV527501       --> .................................................g

               751    -    801
UN14339        --> CTGGTATTCCAATTCAAGATATCGAACCCCTCGTCCTCTTAAACGTTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958943       <-- CTGGTATTCCAATTCAAGATATCGAACCCCTCGTCCTCTTAAACGTTGCT
FY439244       <-- CTGGTATTCCAATTCAAGATATCGAACCCCTCGTCCTCTTAAACGTTGCT
EX777670       <-- CTGGTATTCCAATTCAAGATATCGAACCCCTCGTCCTCTTAAACGTTGCT
EX759855       <-- CTGGTATTCCAATTCAAGATATCGAACCCCTCGTCCTCTTAAACGTTGCT
FD567324       <-- CTGGTATTCCAATTCCAGATATCGAACCCCTCGTCCTCTTAAACGTTGCC
EY919622       <-- CTGGTATTCCAATTCAAGATATCGAACCCCTCGTCCTCTTAAACGTTGCT
EY909636       <-- CTGGTATTCCAATTCAAGATATCGAACCCCTCGTCCTCTTAAACGTTGCT
EY928657       <-- CTGGTATTCCAATTCAAGATATCAAACCCCTCGTCCTCTTAAACGTTGCT
FD942816       <-- CTGGTATTCCAATTCAAGATATCGAACCCCTCGTCCTCTTAAACGTTGCT
FD936344       <-- ................................................cc
EY923887       --> ..................................................
EY913397       --> ..................................................
EV567563       --> CTGGTATTCCAATTCAAGATATCGAACCCCTCGTCCTCTTAAACGTTGCT
EX746390       --> CTGGTA............................................
EX746667       --> ..................................................
EX773964       --> ..................................................
EY908786       --> ..................................................
EY933090       --> ..................................................
EY947218       --> ..................................................
FD563668       --> ..................................................
FD940469       --> ..................................................
FD534963       --> ..................................................
FD542690       --> CTGGTAT-CCAATTCAAGATATCGAACCC-TCGTCCTCTTAAACGTTGCT
FD978779       --> ..................................................
FD979809       --> ..................................................
EX755909       --> CT................................................
FD946757       --> CTGGTATTCCAATT....................................
FY436714       --> ..................................................
FD558199       --> ..................................................
EY905357       --> ..................................................
EX773866       --> CTGGTATTCCAATTCAAGATATCGAACCCCTCGTCCTCTTAAACGTTGCT
FD532533       --> CTGGTATTCCAATTCAAGATATCGAACCCCTCGTCCTCTTAAACGTTGCT
FD956449       --> CTGGTATTCCAATTCAAGATATCGAACCCCTCGTCCTCTTAAACGTTGCT
EV527501       --> gTGGTATTCCAATTCAAGATATCGAACCCCTCGTCCTCTTAAACGTTGCT

               801    -    851
UN14339        --> TTCTTCTTCTTTGCAGCCATTAATCCTGGTAATGGAAAGTTCATTACTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958943       <-- TTCTTCTTCTTTGCAGCCATTAATCCTGGTAATGGAAAGTTCATTACTGA  Raphanus raphanistrum subsp. maritimus
FY439244       <-- TTCTTCTTCTTTGCAGCCATTAATCCTGGTAATGGAAAGTTCATTACTGA  Raphanus sativus cv GSK3-1
EX777670       <-- TTCTTCTTCTTTGCAGCCATTAATCCTGGTAATGGGAAGTTCATTACTGA  Raphanus raphanistrum subsp. landra
EX759855       <-- TTCTTCTTCTTTGCAGCCATTAATCCTGGTAATGGAAAGTTCATTACTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD567324       <-- TTTTTTTTCTTTGCAGCCATTAATCCTGATAATGGAAAGTTCATTACTGA  Raphanus sativus var. oleiformis
EY919622       <-- TTCTTCTTCTTTGCAGCCATTAATCCTGGTAATGGGAAGTTCATTACTGA  Raphanus raphanistrum subsp. landra
EY909636       <-- TTCTTTTTCTTTGCAGCCATTAATCCTGGTAATGGAAAGTTCATTACTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928657       <-- TTCTTCTTCTTTGCAGCCATTAATCCTGGTAATGGAAAGTTCATTACTGA  Raphanus sativus var. oleiformis
FD942816       <-- TTCTTTTTCTTTGCAGCCATTAATCCTGGTAATGGAAAGTTCATTACTGA  Raphanus sativus cv Early Scarlet Globe
FD936344       <-- TTCTTCTTCTTTGCAGCCATTAATCCTGATAATGGAAAGTTCATTACTGA  Raphanus sativus var. oleiformis
EY923887       --> ..................................................  Raphanus raphanistrum subsp. landra
EY913397       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV567563       --> TTCTTCTTCTTTGCAGCCATTAATCCTGGTAATGGGAAGTTCATTACTGA  Raphanus raphanistrum subsp. landra
EX746390       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX746667       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX773964       --> ..................................................  Raphanus raphanistrum subsp. landra
EY908786       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933090       --> ..................................................  Raphanus sativus var. oleiformis
EY947218       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD563668       --> ..................................................  Raphanus sativus var. oleiformis
FD940469       --> ..................................................  Raphanus sativus var. oleiformis
FD534963       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD542690       --> T.................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978779       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979809       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755909       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946757       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY436714       --> ..................................................  Raphanus sativus cv GSK3-1
FD558199       --> ..................................................  Raphanus raphanistrum subsp. landra
EY905357       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX773866       --> TTCTTCTTCTTTGCAGCCATTAATCCTGGTAATGGGAAGTTCATTACTGA  Raphanus raphanistrum subsp. landra
FD532533       --> TTCTTCTTCTTTGCAGCCATTAATCCTGGTAATGGAAAGTTCATTACTGA  Raphanus raphanistrum subsp. maritimus
FD956449       --> TTCTTCTTCTTTGCAGCCATTAATCCTGGTAATGGAAAGTTCATTACTGA  Raphanus sativus cv Rat-Tail Radish #3870
EV527501       --> TTCTTCTTCTTTGCAGCCATTAATCCTGGTAATGGAAAGTTCATTACTGA  Raphanus raphanistrum subsp. maritimus

               851    -    901
UN14339        --> TGATGGTGAAGAAAGCTAAACTATTTATGTACTTAAAATTTGTAGTTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958943       <-- TGATGGTGAAGAAAGCTAAACTATTTATGTACTTAAAATTTGTAGTTTGT  Raphanus raphanistrum subsp. maritimus
FY439244       <-- TGATGGTGAAGAAAGCTAAACTATTTATGTACTTAAAATTTGTAGTTTGT  Raphanus sativus cv GSK3-1
EX777670       <-- TGATGGCGAAGAAAGCTAAACTATTTATGTACTTAAATTTGGTAGTTTGT  Raphanus raphanistrum subsp. landra
EX759855       <-- TGATGGTGAAGAAAGCTAAACTATTTATGTACTTAAAATTTTTAGTTTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD567324       <-- TGATGGTGAAGAAAGCTAAACTATTTATGTACTTAAAATTTGTAGTTTGT  Raphanus sativus var. oleiformis
EY919622       <-- TGATGGCGAAGAAAGCTAAACTATTTATGTACTTAAATTTGGTAGTTTGT  Raphanus raphanistrum subsp. landra
EY909636       <-- TGATGGTGAAGAAAGCTAAACTATTTATGTACTTAAAATTTGTAGTTTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928657       <-- TGATGGTGAAGAAAGCTAAACTATTTATGTACTTAAAATTTGTAGTTTGT  Raphanus sativus var. oleiformis
FD942816       <-- TGATGGTGAAGAAAGCTAAACTATTTATGTACTTAAAATTTGTAGTTTGT  Raphanus sativus cv Early Scarlet Globe
FD936344       <-- TGATGGTGAAGAAAGCTAAACTATTTATGTACTTAAAATTTGTAGTTTGT  Raphanus sativus var. oleiformis
EY923887       --> ..................................................  Raphanus raphanistrum subsp. landra
EY913397       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV567563       --> TGATGGCG-AGAAAGCTAAACTATTTATGTACTT................  Raphanus raphanistrum subsp. landra
EX746390       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX746667       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX773964       --> ..................................................  Raphanus raphanistrum subsp. landra
EY908786       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933090       --> ..................................................  Raphanus sativus var. oleiformis
EY947218       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD563668       --> ..................................................  Raphanus sativus var. oleiformis
FD940469       --> ..................................................  Raphanus sativus var. oleiformis
FD534963       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD542690       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978779       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979809       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755909       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946757       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY436714       --> ..................................................  Raphanus sativus cv GSK3-1
FD558199       --> ..................................................  Raphanus raphanistrum subsp. landra
EY905357       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX773866       --> TGATGGCGAAGAAAGCTAAACTATTTATGTACTTAAATTTGGTAGTTTGT  Raphanus raphanistrum subsp. landra
FD532533       --> TGATGGTGAAGAAAGCTAAACTATTTATGTACTTAAAATTTGTAGTTTGT  Raphanus raphanistrum subsp. maritimus
FD956449       --> TGATGGTGAAGAAAGCTAAACTATTTATGTACTTAAAATTTGTAGTTTGT  Raphanus sativus cv Rat-Tail Radish #3870
EV527501       --> TGATGGTGAAGAAAGCTAAACTATTTATGTACTTAAAATTTGTAGTTTGT  Raphanus raphanistrum subsp. maritimus

               901    -    951
UN14339        --> GAGCCCTCTTCATGTTGAGACAAAATGAAATGGGCAGCTTAAACTGTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958943       <-- GAGCCCTCTTCATGTTGAGACAAAATGAAATGGGCAGCTTAAACTGTTGT
FY439244       <-- GAGCCCTCTTCATGTTGAGACAAAATGAAATGGGCAGCTTAAACTGTTGT
EX777670       <-- GAGCCCTCTTCATGTTGAGACAAAAGGAAATGGGCAGCTTAAACTGTTGT
EX759855       <-- GAGCCCTCTT........................................
FD567324       <-- GAGCCCTCTTCATGTTGAGACAAAATGAAATGGGCAGCTTAAACTGTTGT
EY919622       <-- GAGCCCTCTTCATGTTGAGACAAAAGGAAATGGGCAGCTTAAACTGTTGT
EY909636       <-- GAACCCTCTTCATGTTGAGACAAAAGGAAATGGGCAGCTTAAACTGTTGT
EY928657       <-- GAGCCCTCTTCATGTTGAGACAAAATGAAATGGGCAGCTTAAACTGTTGT
FD942816       <-- GAGCCCTCTTCATGTTGAGACAAAATGAAATGGGCAGCTTAAACTGTTGT
FD936344       <-- GAGCCCTCTTCATGTTGAGACAAAATGAAATGGGCAGCTTAAACTGTTGT
EY923887       --> ..................................................
EY913397       --> ..................................................
EV567563       --> ..................................................
EX746390       --> ..................................................
EX746667       --> ..................................................
EX773964       --> ..................................................
EY908786       --> ..................................................
EY933090       --> ..................................................
EY947218       --> ..................................................
FD563668       --> ..................................................
FD940469       --> ..................................................
FD534963       --> ..................................................
FD542690       --> ..................................................
FD978779       --> ..................................................
FD979809       --> ..................................................
EX755909       --> ..................................................
FD946757       --> ..................................................
FY436714       --> ..................................................
FD558199       --> ..................................................
EY905357       --> ..................................................
EX773866       --> GAGCCCTCTT........................................
FD532533       --> GAGCCCTCTTCATGTTGAGACAAAATGAAATGGGCAGCTTAAACTGTTGT
FD956449       --> GAGCCCTCTTCATGTTGAGACAAAATGAAATGGGCAGCTTAAACTGTTGT
EV527501       --> GAGCCCTCTTCATGTTGAGACAAAATGAAATGGGCAGCTTAAACTGTTGT

               951    -   1001
UN14339        --> AATTCTTAAATCCTCTTGTTTTAACTTGAGTTTTCAGATTATATATAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958943       <-- AATTCTTAAATCCTCTTGTTTTAACTTGAGTATTCAGATTAcatgggc..  Raphanus raphanistrum subsp. maritimus
FY439244       <-- AATTCTTAAATCCTTTTGTTTTAACTTGAGTTTTCAGATTATATATAGCT  Raphanus sativus cv GSK3-1
EX777670       <-- AATGCTTAAATCCTCTTGTTTTAACTTGAGTTTTCAGATTATATATAGCT  Raphanus raphanistrum subsp. landra
EX759855       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD567324       <-- AATTCTTAAATCCTCTTGTTTTAACTTGAGTATTCAGATTAcatgggtga  Raphanus sativus var. oleiformis
EY919622       <-- AATGCTTAAATCCTCTTGTTTTAACTTGAGTTTTCAGATTATATATAGCT  Raphanus raphanistrum subsp. landra
EY909636       <-- AATTCTTAAATCCTCTTGTTTTAACTTGAGTTTTCAGATTATATATAGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928657       <-- AATTCTTAAATCCTCTTGTTTTAACTTGAGTTTTCAGATT..........  Raphanus sativus var. oleiformis
FD942816       <-- AATTCTTAAATCCTCTTGTTTTAACTTGAGTTTTCAGATTAcatggggga  Raphanus sativus cv Early Scarlet Globe
FD936344       <-- AATTCTTAAATCCT....................................  Raphanus sativus var. oleiformis
EY923887       --> ..................................................  Raphanus raphanistrum subsp. landra
EY913397       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV567563       --> ..................................................  Raphanus raphanistrum subsp. landra
EX746390       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX746667       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX773964       --> ..................................................  Raphanus raphanistrum subsp. landra
EY908786       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933090       --> ..................................................  Raphanus sativus var. oleiformis
EY947218       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD563668       --> ..................................................  Raphanus sativus var. oleiformis
FD940469       --> ..................................................  Raphanus sativus var. oleiformis
FD534963       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD542690       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD978779       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979809       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755909       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946757       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY436714       --> ..................................................  Raphanus sativus cv GSK3-1
FD558199       --> ..................................................  Raphanus raphanistrum subsp. landra
EY905357       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX773866       --> ..................................................  Raphanus raphanistrum subsp. landra
FD532533       --> AATTCTTAAATCCTCTTGTTTTAACTTGAGTATTCAGATTAcatgggtga  Raphanus raphanistrum subsp. maritimus
FD956449       --> AATTCTTAAATCCTCTTGTTTTAACTTGAGTTTTCAGATTAcatgggtga  Raphanus sativus cv Rat-Tail Radish #3870
EV527501       --> AATTCTTAAATCCTCTTGTTTTAACTTGAGTATTCAGATTAcatgggtga  Raphanus raphanistrum subsp. maritimus

               1001   -   1051
UN14339        --> TCATAAATGATTTGAATGATTGATATCTTTTAGCATCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD958943       <-- .......................................
FY439244       <-- CCATAAATGATT-GAATG.....................
EX777670       <-- TCATAAATGATTTGAATGATTGATATCTTTTAGCATCTC
EX759855       <-- .......................................
FD567324       <-- ttggttgggct............................
EY919622       <-- TCATAAATGATTTGAAcg.....................
EY909636       <-- CCATAAATGATTTG.........................
EY928657       <-- .......................................
FD942816       <-- ttggttgggctt...........................
FD936344       <-- .......................................
EY923887       --> .......................................
EY913397       --> .......................................
EV567563       --> .......................................
EX746390       --> .......................................
EX746667       --> .......................................
EX773964       --> .......................................
EY908786       --> .......................................
EY933090       --> .......................................
EY947218       --> .......................................
FD563668       --> .......................................
FD940469       --> .......................................
FD534963       --> .......................................
FD542690       --> .......................................
FD978779       --> .......................................
FD979809       --> .......................................
EX755909       --> .......................................
FD946757       --> .......................................
FY436714       --> .......................................
FD558199       --> .......................................
EY905357       --> .......................................
EX773866       --> .......................................
FD532533       --> ttggttgggcttt..........................
FD956449       --> ttggttgggctttatctc.....................
EV527501       --> ttggttgggctttatct......................