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Alignment for radish unigene UN14388

               1      -     51
UN14388        --> TTTTTTTTCTCTGTTCCCGATCTTCCACAGGGGGAATAGTATCTGAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752512       <-- ..................................................
EV531081       <-- ..................................................
EW736245       <-- ..................................................
EV546867       <-- ..................................................
FD564701       --> TTTTTTTTCTCTGTTCCCGATCTTCCACAGGGGGAATAGTATCTGATAAA
EV526659       --> ........CTCTGTTCCCGATCTTCCACAGGGGGAATAGTATCTGAGAAA
EW716353       --> .....gacCTCTGTTCCCGATCTTCAACAGGGGGAATAGTATCTGAGAAA
EW731385       --> ...........gGTTCCCGATCTTCCACAGGGGGAATAGTATCTGAGAAA
EW733187       --> ...........gGTTCCCGATCTTCCACAGGGGGAATAGTATCTGAGAAA
EX747757       --> ..........ggGTTCCCGATCTTCCACAGGGGGAATAGTATCTGAGAAA
EX748635       --> ..........ggGTTCCCGATCTTCCACAGGGGGAATAGTATCTGAGAAA
EV551834       --> ..................................................
EW723723       --> ..................................................

               51     -    101
UN14388        --> CTGCCAAAATGAGTAAGCTCCAGAGTGAAGCCGTGAGAGAGGCGATATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752512       <-- ..................................................
EV531081       <-- ..................................................
EW736245       <-- ..................................................
EV546867       <-- ..................................................
FD564701       --> CTGCCAAAATGAGTAGGCTCCAGAGTGAAGCCGTTAGAGAGGCGATATCC
EV526659       --> CTGCCAAAATGAGTAAGCTCCAGAGTGAAGCCGTGAGAGAGGCGATATCC
EW716353       --> CTGCCAAAATGAG----CTTCAGAGTGAAGCCGTGAGAGAGGCGATATCC
EW731385       --> CTGCCAAAATGAGTAAGCTCCAGAGTGAAGCCGTGAGAGAGGCGATATCC
EW733187       --> CTGCCAAAATGAGTAAGCTCCAGAGTGAAGCCGTGAGAGAGGCGATATCC
EX747757       --> CTGCCAAAATGAGTAAGCTCCAGAGTGATGCCGTGAGAGAGGCGATATCC
EX748635       --> CTGCCAAAATGAGTAAGCTCCAGAGTGAAGCCGTGAGAGAGGCGATATCC
EV551834       --> ..................................................
EW723723       --> ..................................................

               101    -    151
UN14388        --> TCCATCATCACTCATTGCAAGGAGACAAAGCCACGCAAGTTCACTGAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752512       <-- ..................................................
EV531081       <-- ..................................................
EW736245       <-- ..................................................
EV546867       <-- ..................................................
FD564701       --> TCCATGATCACTCACTGCAAGGAGACAAAGCCACGCAAGTTCACTGAGAC
EV526659       --> TCCATCATCACTCATTGCAAGGAGACAAAGCCACGCAAGTTCACTGAGAC
EW716353       --> TCCATGATCACTCACTGCAAGGAGACAAAGCCACGCAAGTTCACTGAGAC
EW731385       --> TCCATCATCACTCATTGCAAGGAGACAAAGCCACGCAAGTTCACTGAGAC
EW733187       --> TCCATCATCACTCATTGCAAGGAGACAAAGCCACGCAAGTTCACTGAGAC
EX747757       --> TCCATCATCACTCATTGCAAGGAGACAAAGCCACGCAAGTTCACTGAGAC
EX748635       --> TCCATCATCACTCATTGCAAGGAGACAAAGCCACGCAAGTTCACTGAGAC
EV551834       --> ..................................................
EW723723       --> ..................................................

               151    -    201
UN14388        --> CATCGAACTCCAGATTGGTCTTAAGAACTATGACCCACAAAAGGACAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752512       <-- .......................AGAACTATGACCCACAAAAGGACAAGC
EV531081       <-- ..................................................
EW736245       <-- ..................................................
EV546867       <-- ..................................................
FD564701       --> CATCGAGCTCCAGATTGGTCTTAAGAACTATGACCCACAAAAGGACAAGC
EV526659       --> CATCGAACTCCAGATTGGTCTTAAGAACTATGACCCACAAAAGGACAAGC
EW716353       --> TATCGAGCTCCAGATTGGTCTTAAGAACTATGACCCACAAAAGGACAAGC
EW731385       --> CATCGAACTCCAGATTGGTCTTAAGAACTATGACCCACAAAAGGACAAGC
EW733187       --> CATCGAACTCCAGATTGGTCTTAAGAACTATGACCCACAAAAGGACAAGC
EX747757       --> CATCGAACTCCAGATTGGTCTTAAGAACTATGACCCACAAAAGGACAAGC
EX748635       --> CATCGAACTCCAGATTGGTCTTAAGAACTATGACCCACAAAAGGACAAGC
EV551834       --> ..................................................
EW723723       --> ..................................................

               201    -    251
UN14388        --> GGTTTAGCGGATCCGTTAAGTTGCCTCACATTCCGAGGCCCAAAATGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752512       <-- GGTTTAGCGGATCCGTTAAGTTGCCTCACATTCCGAGGCCCAAAATGAAG  Raphanus raphanistrum subsp. maritimus
EV531081       <-- ..........................CACATTCCGAGGCCCAAAATGAAG  Raphanus raphanistrum subsp. maritimus
EW736245       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV546867       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD564701       --> GGTTCAGCGGATCCGTTAAGTTGCCTCACATTCCGAGGCCCAAGATGAAG  Raphanus sativus var. oleiformis
EV526659       --> GGTTTAGCGGATCCGTTAAGTTGCCTCACATTCCGAGGCCCAAAATGAAG  Raphanus raphanistrum subsp. maritimus
EW716353       --> GGTTTAGCGGATCCGTTAAGTTGCCTCACATTCCGAGGCCCAAGATGAAG  Raphanus sativus var. oleiformis
EW731385       --> GGTTTAGCGGATCCGTTAAGTTGCCTCACATTCCGAGGCCCAAgat....  Raphanus sativus cv Rat-Tail Radish #3870
EW733187       --> GGTTTAGCGGATCCGTTAAGTTGCCTCACATTCCGAGGCCCAAGATGAAG  Raphanus sativus cv Rat-Tail Radish #3870
EX747757       --> GGTTTAGCGGATCCGTTAAGTTGCCTCACATTCCGAGGCCCAAAATGAAG  Raphanus raphanistrum subsp. maritimus
EX748635       --> GGTTTAGCGGATCCGTTAAGTTGCCTCACATTCCGAGGCCCAAAATGAAG  Raphanus raphanistrum subsp. maritimus
EV551834       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW723723       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               251    -    301
UN14388        --> ATTTGCATGCTCGGTGACGCTCAGCACGTTGAAGAGGCTGAGAAGATTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752512       <-- ATTTGCATGCTCGGTGACGCTCAGCACGTTGAAGAGGCTGAGAAGATTGG
EV531081       <-- ATTTGCATGCTCGGTGACGCTCAGCACGTTGAAGAGGCTGAGAAGATTGG
EW736245       <-- ..................................................
EV546867       <-- ..................................................
FD564701       --> ATTTGCATGCTCGGTGACGCTCAGCACTTTGAAGAGGCTGAGAAGATTGG
EV526659       --> ATTTGCATGCTCGGTGACGCTCAGCACGTTGAAGAGGCTGAGAAGATTGG
EW716353       --> ATTTGCATGCTCGGTGACGCTCAGCACGTTGAAGAGGCTGAGAAGATTGG
EW731385       --> ..................................................
EW733187       --> ATTTGCATGCTCGGTGACGCTCAGCACGTTGAAGAGGCTGAGAAGATTGG
EX747757       --> ATTTGCATGCTCGGTGACGCTCAGCACGTTGAAGAGGCTGAGAAGATTGG
EX748635       --> ATTTGCATGCTCGGTGACGCTCAGCACGTTGAAGAGGCTGAGAAGATTGG
EV551834       --> ...gGCATGCTCGGTGACGCTCAGCACGTTGAAGAGGCTGAGAAGATTGG
EW723723       --> ..................................................

               301    -    351
UN14388        --> GTTAGACTCTATGGATGTTGAAGCTCTTAAGAAGTTGAACAAGAACAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752512       <-- GTTAGACTCTATGGATGTTGAAGCTCTTAAGAAGTTGAACAAGAACAAGA
EV531081       <-- GTTAGACTCTATGGATGTTGAAGCTCTTAAGAAGTTGAACAAGAACAAGA
EW736245       <-- ..................................................
EV546867       <-- ..................................................
FD564701       --> GTTAGACTCTATGGATGTTGAAGCTCTTAAGAAGTTGAACAAGAACAAGA
EV526659       --> GTTAGACTCTATGGATGTTGAAGCTCTTAAGAAGTTGAACAAGAACAAGA
EW716353       --> GTTAGACTCTATGGATGTTGAAGCTCTTAAGAAGTTGAACAAGAACAAGA
EW731385       --> ..................................................
EW733187       --> GTTAGACTCTATGGATGTTGAAGCTCTTAAGAAGTTGAACAAGAACAAGA
EX747757       --> GTTAGACTCTATGGATGTTGAAGCTCTTAAGAAGTTGAACAAGAACAAGA
EX748635       --> GTTAGACTCTATGGATGTTGAAGCTCTTAAGAAGTTGAACAAGAACAAGA
EV551834       --> GTTAGACTCTATGGATGTTGAAGCTCTTAAGAAGTTGAACAAGAACAAGA
EW723723       --> ..................................................

               351    -    401
UN14388        --> AACTTGTTAAGAAGCTCGCCAAGAAGTTCCATGCTTTCCTTGCTTCTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752512       <-- AACTTGTTAAGAAGCTCGCCAAGAAGTTCCATGCTTTCCTTGCTTCTGAA
EV531081       <-- AATTTGTTAAGAAGCTCGCCAAGAAGTTCCATGCTTTCCTTGCTTCTGAA
EW736245       <-- ..................................................
EV546867       <-- ..................................................
FD564701       --> AACTTGTTAAGAAGCTCGCCAAGAAGTTCCATGCTTTCCTTGCTTCTGAA
EV526659       --> AATTTGTTAAGAAGCTCGCCAAGAAGTTCCATGCTTTCCTTGCTTCTGAA
EW716353       --> AACTTGTTAAGAAGCTCGCCAAGAAGTTCCATGCTTTCCTTGCTTCCGAA
EW731385       --> ..................................................
EW733187       --> AACTTGTTAAGAAGCTCGCCAAGAAGTTCCATGCTTTCCTTGCTTCTGAA
EX747757       --> AACTTGTTAAGAAGCTCGCCAAGAAGTTCCATGCTTTCCTTGCTTCTGAA
EX748635       --> AACTTGTTAAGAAGCTCGCCAAGAAGTTCCATGCTTTCCTTGCTTCTGAA
EV551834       --> AACTTGTTAAGAAGCTCGCCGAGAAGTTCCATGCTTTCCTTGCTTCTGAA
EW723723       --> ..................................................

               401    -    451
UN14388        --> TCTGTCATTAAGCAGATTCCTCGTCTTCTTGGTCCTGGTCTCAACAAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752512       <-- TCTGTCATTAAGCAGATTCCTCGTCTTCTTGGTCCTGGTCTCAACAAGGC
EV531081       <-- TCTGTCATTAATCAGATTCCTCGTCTTCTTGGTCCTGGTCTCAACAAGGC
EW736245       <-- ...............................GTCCTGGTCTCAACAAGGC
EV546867       <-- ..................................................
FD564701       --> TCTGTCATTAAGCAGATTCCTCGTCTTCTTGGTCCTGGTCTCAACAAGGC
EV526659       --> TCTGTCATTAATCAGATTCCTCGTCTTCTTGGTCCTGGTCTCAACAAGGC
EW716353       --> TCTGTCATTAAGCAGATTCCTCGTCTTCTTGGTCCTGGTCTCAACAAGGC
EW731385       --> ..................................................
EW733187       --> TCTGTCATTAAGCAGATTCCTCGTCTTCTTGGTCCTGGTCTCAACAAGGC
EX747757       --> TCTGTCATTAAGCAGATTCCTCGTCTTCTTGGTCCTGGTCTCAACAAGGC
EX748635       --> TCTGTCATTAAGCAGATTCCTCGTCTTCTTGGTCCTGGTCTCAACAAGGC
EV551834       --> TCTGTCATTAAGCAGATTCCTCGTCTTCTTGGTCCTGGTCTCAACAAGGC
EW723723       --> ..................................................

               451    -    501
UN14388        --> AGGAAAATTCCCAACTCTTGTTAGCCACCAAGAGTCTTTGGAATCCAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752512       <-- AGGAAAATTCCCAACTCTTGTTAGCCACCAAGAGTCTTTGGAATCCAAGG
EV531081       <-- AGAAAAATTCCCAACTCTTGTTAGCCACCAAGAGTCTTTGGAATCCAAGG
EW736245       <-- AGGAAAGTTCCCTACTCTTGTTAGCCACCAAGAGTCTTTGGAAGCCAAGG
EV546867       <-- ....AAATTCCCAACTCTTGTTAGCCACCAAGCGTCTTTGGAATCCAAGG
FD564701       --> AGGAAAATTCCCTACTCTTGTTAGCCACCAAGAGTCTTTGGAATCGAAGG
EV526659       --> AGGAAAATTCCCAACTCTTGTTAGCCACCAAGAGTCTTTGGAATCCAAGG
EW716353       --> AGGAAAATTCCCAACTCTTGTTAGCCACCAAGAGTCTTTGGAATTGAAGG
EW731385       --> ..................................................
EW733187       --> AGGAAAGTTCCCTACTCTTGTTAGCCACCAAGAGTCTTTGGAAGCCAAGG
EX747757       --> AGGAAAATTCCCAACTCTTGTTAGCCACCAAGAGTCTTTGGAATCCAAGG
EX748635       --> AGGAAAATTCCCAACTCTTGTTAGCCACCAAGAGTCTTTGGAATCCAAGG
EV551834       --> AGGAAAATTCCCAACTCTTGTTAGCCACCAAGCGTCTTTGGAATCCAAGG
EW723723       --> ..................................................

               501    -    551
UN14388        --> TGAATGAGACAAAGGCAACAGTTAAGTTCCAGCTGAAGAAGGTTCTGTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752512       <-- TGAATGAGACAAAGGCAACAGTTAAGTTCCAGCCGAAGAAGGTTCTGTGC  Raphanus raphanistrum subsp. maritimus
EV531081       <-- TGAATGAGACAAAGGCAACAGTTAAGTTCCAGCTGAAGAAGGTTCTGTGC  Raphanus raphanistrum subsp. maritimus
EW736245       <-- TGAATGAGACAAAGGCAACAGTGAAGTTCCAGCTCAAGAAGGTTCTGTGC  Raphanus sativus cv Rat-Tail Radish #3870
EV546867       <-- TGAATGAGACAAAGGCAACAGTTAAGTTCCAGCTGAAGAAGGTTCTGTGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD564701       --> TGAATGAGACAAAGGCAACAGTGAAGTTCCAGCTCAAGAAGGTTCTGTGC  Raphanus sativus var. oleiformis
EV526659       --> TGAATGAGACAAAGGCAACAGTTAAGTTCCAGCTGAAGAAGGTTCTGTGC  Raphanus raphanistrum subsp. maritimus
EW716353       --> TGAATGAGACAAAGGCAACAGTGAAGTTCCAGCTCAAGAAGGTTCTGTGC  Raphanus sativus var. oleiformis
EW731385       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW733187       --> TGAATGAGACAAAGGCAACAGTGAAGTTCCAGCTCAAGAAGGTTCTGTGC  Raphanus sativus cv Rat-Tail Radish #3870
EX747757       --> TGAATGAGACAAAGGCAACAGTTAAGTTCCAGCTGAAGAAGGTTCTGTGC  Raphanus raphanistrum subsp. maritimus
EX748635       --> TGAATGAGACAAAGGCAACAGTTAAGTTCCAGCCGAAGAAGGTTCTGTGC  Raphanus raphanistrum subsp. maritimus
EV551834       --> TGAATGAGACAAAGGCAACAGTTAAGTTCCAGCTGAAGAAGGTTCTGTGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW723723       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               551    -    601
UN14388        --> ATGGGTGTCGCTGTTGGGAATCTCGGCATGGAAGAGAAGCAGATCTTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752512       <-- ATGGGTGTCGCTGTTGGGAATCTCGGCATGGAAGAGAAGCAGATCTTTCA
EV531081       <-- ATGGGTGTCGCTGTTGGGAATCTCGGCATGGAAGAGAAGCAGATCTTTCA
EW736245       <-- ATGGGTGTCGCTGTTGGGAATCTCGGCATGGAAGAGAAGCAGATCTTTCA
EV546867       <-- ATGGGTGTCGCTGTTGGGAATCTCGGCATGGAAGAGAAGCAGATCTTTCA
FD564701       --> ATGGGTGTCGCTGTTGGGAATCTCGGCATGGAAGAGAAGCAGATCTTTCA
EV526659       --> ATGGGTGTCGCTGTTGGGAATCTCGGCATGGAAGAGAAGCAGATCTTTCA
EW716353       --> ATGGGTGTCGCTGTTGGGAATCTCGGCATGGAAGAGAAGCAGATCTTTCA
EW731385       --> ..................................................
EW733187       --> ATGGGTGTCGCTGTTGGGAATCTCGGCATGGAAGAGAAGCAGATCTTTCA
EX747757       --> ATGGGTGTCGCTGTTGGGAATCTCGGCATGGAAGAGAAGCAGATCTTTCA
EX748635       --> ATGGGTGTCGCTGTTGGGAATCTCGGCATGGAAGAGAAGCAGATCTTTCA
EV551834       --> ATGGGTGTCGCTGTTGGGAATCTCGGCATGGAAGAGAAGCAGATCTTTCA
EW723723       --> ..................................................

               601    -    651
UN14388        --> GAACGTTCAGATGAGCGTCAACTTCCTTGTTTCGCTCTTGAAGAAGAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752512       <-- GAACGTTCAGATGAGCGTCAACTTCCTTGTTTCGCTCTTGAAGAAGAACT
EV531081       <-- GAACGTTCAGATGAGCGTCAACTTCCTTGTTTCGCTCTTGAAGAAGAACT
EW736245       <-- GAACGTTCAGATGAGCGTCAACTTCCTTGTTTCGCTCTTGAAGAAGAACT
EV546867       <-- GAACGTTCAGACGAGCGTCAACTTCCTTGTTTCGCTCTTGAAGAAGAACT
FD564701       --> GAA-TTTCAGATGAGCGTCAACTTCCTTGTTTCTCTCTTGAAG.......
EV526659       --> GAACGTTCAGATGAGCGTCAACTTCCTTGTTTCGCTCTTGAAGAAGAACT
EW716353       --> GAACGTTCAGATGAGCGTCAACTTCCTTGTTTCGCTCTTGAAGAAGA-CT
EW731385       --> ..................................................
EW733187       --> GAACGTTCAGATGAGCGTCAACTTCCTTGTTTCGCTCTTGAAGAAGAACT
EX747757       --> GAACGTTCAGATGAGCGTCAACTTCCTTGTTTCGCTCTTGAAGAAGAACT
EX748635       --> GAACGTTCAGATGAGCGTCAACTTCCTTGTTTCGCTCTTGAAGAAGAACT
EV551834       --> GAACGTTCAGACGAGCGTCAACTTCCTTGTTTCGCTCTTGAAGAAGAACT
EW723723       --> .................................tCTCTTGAAGAAGAACT

               651    -    701
UN14388        --> GGCAAAACGTGAGGTGCTTGTACTTGAAGAGCACAATGGGTCCACCAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752512       <-- GGCAAAACGTGAGGTGCTTGTACTTGAAGAGCACAATGAGTCCACCAAAC
EV531081       <-- GGCAAAACGTGAGGTGCTTGTACTTGAAGAGCACAATGGGTCCACCAAAC
EW736245       <-- GGCAAAACGTGAGGTGCTTGTACTTGAAGAGCGCAATGGGTCCACCAAAC
EV546867       <-- GGCAAAACGTGAGGTGCTTGTACTTGAAGAGCACAATGGGTCCACCAAAC
FD564701       --> ..................................................
EV526659       --> GGCAAAACGTGAGGTGCTTGTACTTGAAGAGCACAATGGGTCCACCAAAC
EW716353       --> GGCAAAACGTGAGGTGCTTGTACTTGAAGAGCACAATGGGTCCACCAGAC
EW731385       --> ..................................................
EW733187       --> GGCAAAACGTGAGGTGCTTGTACTTGAAGAGCGCAATGGGTCCACCAAAC
EX747757       --> GGCAAAACGTGAGGTGCTTGTACTTGAAGAGCACAATGGGTCCACCAAGC
EX748635       --> GGCAAAACGTGAGGTGCTTGTACTTGAAGAGCACAATGAGTCCACCAAAC
EV551834       --> GGCAAAACGTGAGGTGCTTGTACTTGAAGAGCACAATGGGTCCACCAAAC
EW723723       --> GGCAAAACGTGAGGTGCTTGTACTTGAAGAGCACAATGGGTCCACCAAAC

               701    -    751
UN14388        --> CGTGTTTTCTAAGATGTTCTTATTC-TCTGAA-GGTGTCGTCAGCAGACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752512       <-- CGTGTTTTCTAAGATGTTCTTATTC-TCTGAA-GGTGTCGTCAGCAGACG
EV531081       <-- CGTGTTTTTTAAGATGTTCTTATTC-TCTGAA-GGTGTCGTCAGCAGACG
EW736245       <-- CGTGTTTTtta.......................................
EV546867       <-- CGTGTTTTCTAATATGTTCTTATTC-TCTGAA-GGTGTCGTCAGCAGACG
FD564701       --> ..................................................
EV526659       --> CGTGTTTTCTAAGATGTTCTTATTC-TCTGAA-AGTGTCGTCAGCAGACG
EW716353       --> CGTGTTTTCTAAGATGTTCTTATTC-TCTGAA-G-TGTCGTCAGCAGACG
EW731385       --> ..................................................
EW733187       --> CGTGTTTTCTAAGATGTTCTTATTC-TCTGAAAGGTGTCGTCAGCAGACG
EX747757       --> CGTGTTTTCTAAGATGTTCTTATTC-TCTGAA-G-TGTCGTCAGCAGACG
EX748635       --> CGTGTTTTCTAAGATGTTCTTATTC-TCTGAA-G-TGTCGTCAGCA....
EV551834       --> CGTGTTTTCTAATATGTTCTTATTC-TCTGAA-GGTGTCGTCAGCAGACG
EW723723       --> CGTGTTTTCTAAGATGTTCTTATTCCTCTGAA-AGTGTCGTCAGCAGACG

               751    -    801
UN14388        --> GATAGAAAAGTTGATTTTCTTTCCAGTCATGAGCCTTCTTCTTCTTGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752512       <-- GATAGAAAAGTTGATTTTCTTTCCAGTCATGAGCCTTCTTCTTCTTGGAT
EV531081       <-- GATAGAAAAGTTGATTTTCTTTCCAGTCATGAGCCTTCTTCTTCTTGGAT
EW736245       <-- ..................................................
EV546867       <-- GATAGAAAAGTTGATTTTCTTTCCAGTCGTGACCCTTCTTCTTCTTGGAT
FD564701       --> ..................................................
EV526659       --> GATAGAAAAGTTGATTTTCTTTCCAGTCATGAGCCTTCTTCTTCTTGGAT
EW716353       --> GATAGAAA-GTTGATTTTCTTTC-AGTCATGAGCCT-CTTCTct......
EW731385       --> ..................................................
EW733187       --> GATAGAAAAGTTGATTTTCTTTTCAGTCATGAGCCTTCTTCTTCTTGGAT
EX747757       --> GATAGAAA-GTTGATTTTCTTTC-AGTCATGAGCCTTCTTCTTCTTGGAT
EX748635       --> ..................................................
EV551834       --> GATAGAAAAGTTGATTTTCTTTCCAGTCGTGAGCCTTCTTCTTCTTGGAT
EW723723       --> agag..............................................

               801    -    851
UN14388        --> TAGTTCCTGAATCTTTACTTTGTAGGATCAAGATTTTGTTGAAAGACAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752512       <-- TAGTTCCTGAATCTTTACTTTGTAGGATCAAGATTTTGTTGAAAGACAGT
EV531081       <-- TAGTTCCTGAATCTTTACTTTGTAGGATCAAGATTTTGTTGAAAGACAGT
EW736245       <-- ..................................................
EV546867       <-- TAGTTCCTGAATCTTTACTTTGTAGGATCAAGATTTTGTTGAAAGACAGT
FD564701       --> ..................................................
EV526659       --> TAGTTCCTGAATCTTTACTTTGTAG-ATCAAGATTTTGTTGAAAGACAGT
EW716353       --> ..................................................
EW731385       --> ..................................................
EW733187       --> TAGTTCCTGAATCTTTACTTTG............................
EX747757       --> -AG-TCCT-TATCTTTACTTT.............................
EX748635       --> ..................................................
EV551834       --> TAGTTCCTGAATCTTTACTTTGTAGGATCAAGATTTTGTTGAAAGACAGT
EW723723       --> ..................................................

               851    -    901
UN14388        --> TTTGTTTCTGTTATTATTAGTGGGATTTTCTCTATTTTAATTATTTCGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752512       <-- TTTGTTTCTGTTATTATTAGTGGGATTTTCTCTATTTTAATTATTTCGTG
EV531081       <-- TTTGTTTCTGTTATTATTAGTGGGATTTTCTCTATTTTAATTATTTCGTG
EW736245       <-- ..................................................
EV546867       <-- TTTGTTTCTGTTATTATTAGTGGGATTTTCTCTATTTTAATTATTTCGTG
FD564701       --> ..................................................
EV526659       --> TTTGTTTCTGTTAT-ATTAGTGGGATTTTCTCT.................
EW716353       --> ..................................................
EW731385       --> ..................................................
EW733187       --> ..................................................
EX747757       --> ..................................................
EX748635       --> ..................................................
EV551834       --> TTTGTTTCTGTTATTATTAGTGGGATTTTCTCTATTTTAATTATTTCGTG
EW723723       --> ..................................................

               901    -    951
UN14388        --> ACGACACATCATTTAAAGG-TTAGTCTTGGG-TGAATGTGACAAATTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752512       <-- ACGACACATC........................................
EV531081       <-- ACGACACATCATTTAAAGG-TTAGTCTTGGG-TGAATGTGACAAATTAAA
EW736245       <-- ..................................................
EV546867       <-- ACGACACATCATTTAAGGG-TTAGTCTTGGG-TGAATGTGACAAATTAAA
FD564701       --> ..................................................
EV526659       --> ..................................................
EW716353       --> ..................................................
EW731385       --> ..................................................
EW733187       --> ..................................................
EX747757       --> ..................................................
EX748635       --> ..................................................
EV551834       --> ACGACACATCATTTAAAGGGTTAGTCTTGGGGTGAATGTGACAAATTAAA
EW723723       --> ..................................................

               951    -   1001
UN14388        --> CGGTCTTCTTGTCATGACATTCTTCAATATCAACCAAACATGATTATTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752512       <-- ..................................................
EV531081       <-- CGGTCTCCTTG.......................................
EW736245       <-- ..................................................
EV546867       <-- CGGTCTTCTTGTCATGACATTCTTCAATATCAACCAAACATGATTATTAC
FD564701       --> ..................................................
EV526659       --> ..................................................
EW716353       --> ..................................................
EW731385       --> ..................................................
EW733187       --> ..................................................
EX747757       --> ..................................................
EX748635       --> ..................................................
EV551834       --> CGGTCTTCTTGTCATGACATTCTTCAATATCAACCAAACATGATTATTAC
EW723723       --> ..................................................

               1001   -   1051
UN14388        --> CC
                   ~~
EX752512       <-- ..
EV531081       <-- ..
EW736245       <-- ..
EV546867       <-- CC
FD564701       --> ..
EV526659       --> ..
EW716353       --> ..
EW731385       --> ..
EW733187       --> ..
EX747757       --> ..
EX748635       --> ..
EV551834       --> CC
EW723723       --> ..