1      -     51
UN14407        --> GTCAGGACGAGAAAACATAAACCCAACCAAGAATAGATTAAAAATACAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445888       <-- .....................................TTAAAAATACAAC
EV548204       <-- ..................................................
FD541986       <-- ..................................................
EY900521       <-- ..................................................
EW716630       <-- ..................................................
FD954627       <-- ..................................................
EX902763       <-- ..................................................
EY939193       <-- ..................................................
FD572088       <-- ..................................................
EV543924       --> GTCAGGACGAGAAAACATAAACCAAACCAAGAATAGATTAAAAATACAAC
EX776616       --> ...................AACCCAACCAAGAATAGATTAAAA-TACAAC
FY431164       --> .....................aCCAACCAAGAATAGATTAAAAANTCAAC
EW720725       --> ....................................cTTAAAAATACAAC
EY935176       --> .....................................TTAAAAATACAAC
FD575802       --> .....................................TTAAAAATACAAC
FD950844       --> .....................................TTAAAAATACAAC
EY896045       --> ..................................................

               51     -    101
UN14407        --> TTTGTTTTCGTTTTTTTTCTTTTCCATTTTCACAGAAGAAACAACAAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445888       <-- TTTGTTTTCGTTTTTTT-CTTTTCCATTTTCACAGAAGAAACAACAAAAT  Raphanus sativus cv GSK3-1
EV548204       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541986       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900521       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW716630       <-- ..................................................  Raphanus sativus var. oleiformis
FD954627       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX902763       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY939193       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD572088       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV543924       --> TTTGTTTTCGTTTTTTT-CTTTTCCATTTTCACAGAAGAAACAACAAAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776616       --> TTTGTTTTCGTTTTTTT-CTTTTCCATTTTCACAGAAAAAACAACAAAAT  Raphanus raphanistrum subsp. landra
FY431164       --> TTTGTTTTCGTTTTTTT-CTTTTCCATTTTCACAGAAGAAACAACAAAAT  Raphanus sativus cv GSK3-1
EW720725       --> TTTGTTTTCGTTTTTTTTCTTTTCCATTTTCACAGAAAAAACAACAAAAT  Raphanus sativus var. oleiformis
EY935176       --> TTTGTTTTCGTTTTTTTTCTTTTCCATTTTCACAGAAGAAACAACAAAAT  Raphanus sativus cv Early Scarlet Globe
FD575802       --> TTTGTTTTCGTTTTTTTTCTTTTCCATTTTCACAGAAAAAACAACAAAAT  Raphanus sativus cv Early Scarlet Globe
FD950844       --> TTTGTTTTCGTTTTTTTTCTTTTCCATTTTCACAGAAGAAACAACAAAAT  Raphanus sativus cv Rat-Tail Radish #3870
EY896045       --> .......................CCATTTTCACAGAAGAAACAACAAAAT  Raphanus raphanistrum subsp. maritimus

               101    -    151
UN14407        --> CTTGGAAACTGGAGTTCAGAGAGATTT--AAAAAA-AAAAA-CAAATAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445888       <-- CTTGGAAACTTGAGTTCAGAGAGATTT--AAAAAACAAAAA-CAAATAAA  Raphanus sativus cv GSK3-1
EV548204       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541986       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900521       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW716630       <-- ..................................................  Raphanus sativus var. oleiformis
FD954627       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX902763       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY939193       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD572088       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV543924       --> CTTGGAAACTGGAGTTCAGAGAGATTT--AAAAAA-AAAAAACAAATAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776616       --> CTTGGAAACTGGAGTTCAGAGAGATTT--AAAAAA-AAAAA-CAAATAAA  Raphanus raphanistrum subsp. landra
FY431164       --> CTTGGAAACTTGAGTTCAGAGAGATTT--AAAAAACAAAAA-CAAATAAA  Raphanus sativus cv GSK3-1
EW720725       --> CTTGGAAACTGGAGTTCAAAGAGATTT--AAAAAA-AAA---CAAATAAA  Raphanus sativus var. oleiformis
EY935176       --> CTTGGAAACTGGAGTTCAGAGAGATTT--AAAAAA-AAA---CAAATAAA  Raphanus sativus cv Early Scarlet Globe
FD575802       --> CTTGGAAACTGGAGTTCAAAGAGATTT--AAAAAA-AAAA--CAAATAAA  Raphanus sativus cv Early Scarlet Globe
FD950844       --> CTTGGAAACTGGAGTTCAGAGAGATTT--AAAAAA-AAA---CAAATAAA  Raphanus sativus cv Rat-Tail Radish #3870
EY896045       --> CTTGGAAACTTGAGTTCAGAGAGATTTTAAAAAAA-AAAAA-CAAATAAA  Raphanus raphanistrum subsp. maritimus

               151    -    201
UN14407        --> CATGATACATGACTGAAAACAAACACACTTGCCAAACTGTTTGATCTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445888       <-- CATGATACATGACTGAAAACAAACACACTTGCCGAACTGTTTGATCTGCT
EV548204       <-- ..................................................
FD541986       <-- ..................................................
EY900521       <-- ..................................................
EW716630       <-- ..................................................
FD954627       <-- ..................................................
EX902763       <-- ..................................................
EY939193       <-- ..................................................
FD572088       <-- ..................................................
EV543924       --> CATGATACATGACTGAAAACAAACACACTTGCCAAACTGTTTGATCTGCT
EX776616       --> CATGATACATGACTGAAAACAAACACACTTGCCAAACTGTTTGATCTGCT
FY431164       --> CATGATACATGACTGAAAACAAACACACTTGCCGAACTGTTTGATCTGCT
EW720725       --> CATGATACATGACTGAAAACAAACACACTTGCCAAACTGTTTGATCTGCT
EY935176       --> CATGATACATGACTGAAAACAAACACACTTGCCAAACTGTTTGATCTGCT
FD575802       --> CATGATACATGACTGAAAACAAACACACTTGCCAAACTGTTTGATCTGCT
FD950844       --> CATGATACATGACTGAAAACAAACACACTTGCCAAACTGTTTGATCTGCC
EY896045       --> CATGATACATGACTGAAAACAAACACACTTGCCGAACTGTTTGATCTGCT

               201    -    251
UN14407        --> ATGCTCTTCTCAGGTATCTTCCACCTGAGAATGAAACACAAAGCTCGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445888       <-- ATGCTCTTCTCAGGTATCTTCCACCTGAGAATGAAACACAAAGCTCGGAA
EV548204       <-- ..................................................
FD541986       <-- ..................................................
EY900521       <-- ..................................................
EW716630       <-- ..................................................
FD954627       <-- ..................................................
EX902763       <-- ..................................................
EY939193       <-- ..................................................
FD572088       <-- ..................................................
EV543924       --> ATGCTCTTCTCAGGTATCTTCCACCTGAGAATGAAACACAAAGCTCGGAA
EX776616       --> ATGCTCTTCTCAGGTATCTTCCACCTGAAAATGAAACACAAAGCTCGGAA
FY431164       --> ATGCTCTTCTCAGGTATCTTCCACCTGAGAATGAAACACAAAGCTCGGAA
EW720725       --> ATGCTCTTCTCAGGTATCTTCCACCTGAAAATGAAACACAAAGCTCGGAA
EY935176       --> ATGCTCTTCTCAGGTATCTTCCACCTGAGAATGAAACACAAAGCTCGGAA
FD575802       --> ATGCTCTTCTCAGGTATCCTCCACCTGAAAATGAAACACAAAGCTCGGAA
FD950844       --> ATGCTCTTCTCAGGTATCTTCCACCTGAAAATGAAACACAAAGCTCGGAA
EY896045       --> ATGCTCTTCTCAGGTATCTTCCACCTGAGAATGAAACACAAAGCTCGGAA

               251    -    301
UN14407        --> ACGTAGTCGTGATATCCTTGAGATACTGAAGTGTCATGTTCTTCAAAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445888       <-- ACGTAGTCGTGATATCCTTGAGATACTGAAGTGTCATGTTCTTCAGAAGC  Raphanus sativus cv GSK3-1
EV548204       <-- .................TTGAGATACTGAAGTGTCATGTTCTTCAGAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541986       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900521       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW716630       <-- ..................................................  Raphanus sativus var. oleiformis
FD954627       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX902763       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY939193       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD572088       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV543924       --> ACGTAGTCGTGATATCCTTGAGATACTGAAGTGTCATGTTCTTCAGAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776616       --> ACGTAGTCGTGATATCCTTGAAATACTGAAGTGTCATGTTCTTCAAAAGC  Raphanus raphanistrum subsp. landra
FY431164       --> ACGTAGTCGTGATATCCTTGAGATACTGAAGTGTCATGTTCTTCAGAAGC  Raphanus sativus cv GSK3-1
EW720725       --> ACGTAGTCGTGATATCCTTGAGATACTGAAGTGTCATGTTCTTCAAAAGC  Raphanus sativus var. oleiformis
EY935176       --> ACGTAGTCGTGATATCCTTGAGATACTGAAGTGTCATGTTCTTCAAAAGC  Raphanus sativus cv Early Scarlet Globe
FD575802       --> ACGTAGTCGTGATATCCTTGAAATACTGAAGTGTCATGTTCTTCAAAAGC  Raphanus sativus cv Early Scarlet Globe
FD950844       --> ACGTAGTCGTGATATCCTTGAGATACTGAAGTGTCATGTTCTTCAAAAGC  Raphanus sativus cv Rat-Tail Radish #3870
EY896045       --> ACGTAGTCGTGATATCCTTGAGATACTGAAGTGTCATGTTCTTCAAAAGC  Raphanus raphanistrum subsp. maritimus

               301    -    351
UN14407        --> GAAGGATGCCTAAGAACAAGGATCCTCCACTCTTCCTTATCGATCCTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445888       <-- GAAGGATGCCTAAGAACAAGGATCCTCCACTCTTCCTTATCGATCCTCCC  Raphanus sativus cv GSK3-1
EV548204       <-- GAAGGATGCCTAAGAACAAGGATCCTCCACTCTTCCTTATCGATCCTCCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541986       <-- ......atgCTAAGAACAAGGATCCTCCACTC--TCTTATCGATCCTCC-  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900521       <-- .............GAACAAGGATCCTCCACTCTTC-TTATCGATCCTCCC  Raphanus raphanistrum subsp. maritimus
EW716630       <-- ..................................................  Raphanus sativus var. oleiformis
FD954627       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX902763       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY939193       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD572088       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV543924       --> GAAGGATGCCTAAGAACAAGGATCCTCCACTCTTCCTTATCGATCCTCCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776616       --> GAAGGATGCCTAAAAACAAGGATCCTCCACTCTTCCTTATCGATCCTCCC  Raphanus raphanistrum subsp. landra
FY431164       --> GAAGGATGCCTAAGAACAAGGATCCTCCACTCTTCCTTATCGATCCTCCC  Raphanus sativus cv GSK3-1
EW720725       --> GAAGGATGCCTAAAAACAAGGATCCTCCACTCTTCCTTATCGATCCTCCC  Raphanus sativus var. oleiformis
EY935176       --> GAAGGATGCCTAAAAACAAGGATCCTCCACTCTTCCTTATCGATCCTCCC  Raphanus sativus cv Early Scarlet Globe
FD575802       --> GAAGGATGCCTAAAAACAAGGATCCTCCACTCTTCCTTATCGATCCTCCC  Raphanus sativus cv Early Scarlet Globe
FD950844       --> GAAGGATGCCTAAAAACAAGGATCCTCCACTCTTCCTTATCGATCCTCCC  Raphanus sativus cv Rat-Tail Radish #3870
EY896045       --> GAAGGATGCCTAAAAACAAGGATCCTCCACTCTTCCTTATCGATCCTCCC  Raphanus raphanistrum subsp. maritimus

               351    -    401
UN14407        --> GTCATGCTTTGTGTCAGCTTCTTCAAATGTCTTGTCGATTATACTCTCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445888       <-- GTCATGCTTTGTGTCAGCTTCTTCAAATGTCTTGTCGATTATACTCTCTA
EV548204       <-- GTCATGCTTTGTGTCAGCTTCTTCAAATGTCTTGTCGATTATACTCTCTA
FD541986       <-- GTCATGCTTTGTGTCAGCTTCTTCAAATGTCT-GTCGATTATACTCTCTA
EY900521       <-- GTCATGCTTTGTGTCAGCTTCTTCAAATGTCT-GTCGATTATACTCTCTA
EW716630       <-- GTCATGCTTTGTGTCAGCTTCTTCAAATGTCTTGTCGATTATACTCTCTA
FD954627       <-- ..................................................
EX902763       <-- ..................................................
EY939193       <-- ..................................................
FD572088       <-- ..................................................
EV543924       --> GTCATGCTTTGTGTCAGCTTCTTCAAATGTCTTGTCGATTATACTCTCTA
EX776616       --> GTCATGCTTTGTGTCAGCTTCTTCAAATGTCTTGTCGATTATACTCTCTA
FY431164       --> GTCATGCTTTGTGTCAGCTTCTTCAAATGTCTTGTCGATTATACTCTCTA
EW720725       --> GTCATGCTTTGTGTCAGCTTCTTCAAATGTCTTGTCGATTATACTCTCTA
EY935176       --> GTCATGCTTTGTGTCAGCTTCTTCAAATGTCTTGTCGATTATACTCTCTA
FD575802       --> GTCATGCTTTGTGTCAGCTTCTTCAAATGTCTTGTCGATTATACTCTCTA
FD950844       --> GTCATGCTTTGTATCAGCTTCTTCAAATGTCTTGTCGATTATACTCTCTA
EY896045       --> GTCATGCTTTGTGTCAGCTTCTTCAAATGTCTTGTCGATTATACTCTCTA

               401    -    451
UN14407        --> TGACTTCGTCTGACAGGTTCATGCCTGACTCAGCAAGAGTAGCCACCACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445888       <-- TGACTTCGTCTGACAGGTTCATGCCTGACTCAGCAAGAGTAGCCACCACC
EV548204       <-- TGACTTCGTCTGATAGGTTCATGCCTGACTCAGCAAGAGTAGCCACCACC
FD541986       <-- TGACTTCGTCTGACAGGTTCATGCCCGACTCAGCAAGAGTAGCCACCACC
EY900521       <-- TGACTTCGTCTGACAGGTTCATGC-TGACTCAGCAAGAGTAGCCACCACC
EW716630       <-- TGACTTCGTCTGACAGGTTCATGCCTGACTCAGCAAGAGTAGCCACCACC
FD954627       <-- ............................CTCAGCAAGAGTAGCCACCACC
EX902763       <-- ..................................................
EY939193       <-- ..................................................
FD572088       <-- ..................................................
EV543924       --> TGACTTCGTCTGATAGGTTCATGCCTGACTCAGCAAGAGTAGCCACCACC
EX776616       --> TGACTTCGTCTGACAGGTTCATGCCTGACTCAGCAAGAGTAGCCACCACC
FY431164       --> TGACTTCGTCTGACAGGTTCATGCCTGACTCAGCAAGAGTAGCCACCACC
EW720725       --> TGACTTCGTCTGACAGGTTCATGCCTGACTCAGCAAGAGTAGCCACCACC
EY935176       --> TGACTTCGTCTGACAGGTTCATGCCTGACTCAGCAAGAGTAGCCACCACC
FD575802       --> TGACTTCGTCTGACAGG.................................
FD950844       --> TGACTTCGTCTGACAGGTTCATGCCTGACTCAGCAAGAGTAGCCACCACC
EY896045       --> TGACTTCGTCTGACAGGTTCATGCCTGACTCAGCAAGAGTAGCCACCACC

               451    -    501
UN14407        --> ATTTGCTTCACCTCCTGCCTCTCGATGAAACCTTGCTGCTTAAGATCATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445888       <-- ATTTGCTTCACCTCCTGCCTCTCGATGAAACCTTGCTGC...........
EV548204       <-- ATCTGCTTCACCTCCTGCCTCTCGATGAAACCTTGCTGTTTAAGATCATA
FD541986       <-- ATTTGCTTCACCTCCTGCCTCTCGATGAAACCTTGCTGTTTAAGATCATA
EY900521       <-- ATTTGCTTCACCTC-TGCCTCTCGATGAAACCTTGCTGCTTAAGATCATA
EW716630       <-- ATTTGCTTCACCTCCTGCCTCTCGATGAAACCTTGCTGCTTAAGATCATA
FD954627       <-- ATTTGCTTCACCTCCTGCCTCTCGATGAAACCTTGCTGCTTAAGATCATA
EX902763       <-- ..................CTCTCGATGAAACCTTGCTGCTTAAGATCATA
EY939193       <-- ...................................CTGCTTAAGATCATA
FD572088       <-- ..................................................
EV543924       --> ATCTGCTTCACCTCCTGCCTCTCGATGAAACCTTGCTGTTTAAGATCATA
EX776616       --> ATTTGCTTCACCTCCTGCCTCTCGATGAAACCTTACTGCTTAAAATCATA
FY431164       --> ATTTGCTTCACCTCCTGCCTCTCGATGAAACCTTGCTGCTTAAGATCATA
EW720725       --> ATTTGCTTCACCTCCTGCCTCTCGATGAAACCTTGCTGCTTAAAATCATA
EY935176       --> ATTTGCTTCACCTCCTGCCTCTCGATGAAACCTTGCTGCTTAAGATCATA
FD575802       --> ..................................................
FD950844       --> ATTTGCTTCACCTCCTGCCTCTCGATGAAACCTTGCTGCTTAAGATCATA
EY896045       --> ATTTGCTTCACCTCCTGCCTCTCGATGAAACCTTGCTGCTTAAGATCATA

               501    -    551
UN14407        --> TAGCTGAAACGAAAAATCAATCTTGTCGTCTATAGGAGCATTTGGATGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445888       <-- ..................................................  Raphanus sativus cv GSK3-1
EV548204       <-- TAACTGAAACGAAAAATCAATCTTGTCGTCTATAGGAGCATTTGGATGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541986       <-- TAACTGAAACGAAAAATCAATCTTGTCGTCTATAGGAGCATTTGGATGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900521       <-- TAGCTGAAACGAAAAATCAATCTTGTCGTCTATAGGAGCATTTGGATGAA  Raphanus raphanistrum subsp. maritimus
EW716630       <-- TAGCTGAAAC-AAAAATCAATCTTGTCGTCTATAGGAGCATTTGGATGAA  Raphanus sativus var. oleiformis
FD954627       <-- TAGCTGAAACGAAAAATCAATCTTGTCGTCTATAGGAGCATTTGGATGAA  Raphanus sativus cv Rat-Tail Radish #3870
EX902763       <-- TAGCTGAAACGAAAAATCAATCTTGTCGTCTATAGGAGCATTTGGATGAA  Raphanus sativus cv Rat-Tail Radish #3870
EY939193       <-- TAGCTGAAACGAAAAATCAATCTTGTCGTCTATAGGAGCATTTGGATGAA  Raphanus sativus cv Early Scarlet Globe
FD572088       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV543924       --> TAACTGAAACGAAAAATCAATCTTGTCGTCTATAGGAGCATTTGGATGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776616       --> TAACTGGAACGAAAAATCAATCTTGTCATCTATAGGAGCGTTTGGATGAA  Raphanus raphanistrum subsp. landra
FY431164       --> TAGCTGAAACGAAAAATCAATCTTGTCGTCTATAGGAGCATTTGGATGAA  Raphanus sativus cv GSK3-1
EW720725       --> TAGCTGAAAC-AAAAATCAATCTTGTCGTCTATAGGAGCATTTGGATGAA  Raphanus sativus var. oleiformis
EY935176       --> TAGCTGAAACGAAAAATCAATCTTGTCGTCTATAGGAGCATTTGGATGAA  Raphanus sativus cv Early Scarlet Globe
FD575802       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD950844       --> TAGCTGAAACGAAAAATCAATCTTGTCGTCTATAGGAGCATTTGGATGAA  Raphanus sativus cv Rat-Tail Radish #3870
EY896045       --> TAGCTGAAACGAAAAATCAATCTTGTCGTCTATAGGAGCATTTGGATGAA  Raphanus raphanistrum subsp. maritimus

               551    -    601
UN14407        --> AGACGGAGAGAGCACGGGCAAACTCCTCAAACCCCAGTATTCCATTATGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445888       <-- ..................................................  Raphanus sativus cv GSK3-1
EV548204       <-- AGACGGAGAGAGCACGGGCAAACTCCTCAAACCCCAGTATTCCATTATGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541986       <-- AGACGGAGAGAGCACGAGCAAACTCCTCAAACCCCAGTATTCCATTATGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900521       <-- AGACGGAGAGAGCACGGGCAAACTCCTCAAACCCCAGTATTCCATTATGC  Raphanus raphanistrum subsp. maritimus
EW716630       <-- AGACGGAGAGAGCACGGGCAAACTCCTCAAACCCCAATATTCCATTATGC  Raphanus sativus var. oleiformis
FD954627       <-- AGACGGAGAGAGCACGGGCAAACTCCTCAAACCCCAATATTCCATTATGC  Raphanus sativus cv Rat-Tail Radish #3870
EX902763       <-- AGACGGAGAGAGCACGGGCAAACTCCTCAAACCCCAATATTCCATTATGC  Raphanus sativus cv Rat-Tail Radish #3870
EY939193       <-- AGACGGAGAGAGCACGGGCAAACTCCTCAAACCCCAATATTCCATTATGC  Raphanus sativus cv Early Scarlet Globe
FD572088       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV543924       --> AGACGGAGAGAGCACGGGCAAACTCCTCAAACCCCAGTATTCCATTATGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776616       --> AGACGGAAAGAGCGCGGGCAAACTCCTCAAACCCCAGTATTCCATTATGC  Raphanus raphanistrum subsp. landra
FY431164       --> AGACGGAGAGAGCACGGGCAAACTCCTCAAACCCCAGTATTCCATTATGC  Raphanus sativus cv GSK3-1
EW720725       --> AGACGGAAAGAGCACGGGCAAACTCCTCAAACCCCAATATTCCATTATGC  Raphanus sativus var. oleiformis
EY935176       --> AGACGGAGAGAGCACGGGCAAACTCCTCAAACCCCAATATTCCATTATGC  Raphanus sativus cv Early Scarlet Globe
FD575802       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD950844       --> AGACGGAGAGAGCACGGGCAAACTCCTCAAACCCCAATATTCCATTATGC  Raphanus sativus cv Rat-Tail Radish #3870
EY896045       --> AGACGGAGAGAGCACGGGCAAACTCCTCAAACCCCAGTATTCCATTATGC  Raphanus raphanistrum subsp. maritimus

               601    -    651
UN14407        --> TTTGTGTCAAACAAATCAAACACCCGGTCTGCAAACAAGCTCTCTTTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445888       <-- ..................................................  Raphanus sativus cv GSK3-1
EV548204       <-- TTTGTGTCGAACAAGTCAAACACCCGGTCTGCAAACAAGCTCTCTTTTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541986       <-- TTTGTGTCGAACAAATCAAACACCCGGTCTGCAAACAAGCTCTCTTTTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900521       <-- TTTGTGTCGAACAAATCAAACACCCGGTCTGCAAACAAGCTCTCTTTTTT  Raphanus raphanistrum subsp. maritimus
EW716630       <-- TTTGTGTCAAACAAATCAAACACCCGGTCTGCAAACAAGCTCTCTTTTTT  Raphanus sativus var. oleiformis
FD954627       <-- TTTGTGTCAAACAAATCAAACACCCGGTCTGCAAACAAGCTCTCTTTTTT  Raphanus sativus cv Rat-Tail Radish #3870
EX902763       <-- TTTGTGTCAAACAAATCAAACACCCGGTCTGCAAACAAGCTCTCTTTTTT  Raphanus sativus cv Rat-Tail Radish #3870
EY939193       <-- TTTGTGTCAAACAAATCAAACACCCGGTCTGCAAACAAGCTCTCTTTTTT  Raphanus sativus cv Early Scarlet Globe
FD572088       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV543924       --> TTTGTGTCGAACAAGTCAAACACCCGGTCTGCAAACAAGCTCTCTTTTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776616       --> TTTGTGTCAAACAAATCAAACACCCGGTCTGCAAACAAGCTCTCTTTTTT  Raphanus raphanistrum subsp. landra
FY431164       --> TTTGTGTCGAACAAATCAAACACCCGGTCTGCAAACAAGCTCTCTTTTTT  Raphanus sativus cv GSK3-1
EW720725       --> TTTGTGTCAAACAAATCAAACACCCGGTCTGCAAACAAGCTCTCTTTTTT  Raphanus sativus var. oleiformis
EY935176       --> TTTGTGTCAAACAAATCAAACACCCGGTCTGCAAACAAGCTCTCTTTTTT  Raphanus sativus cv Early Scarlet Globe
FD575802       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD950844       --> TTTGTGTCAAACAAATCAAACACCCGGTCTGCAAACAAGCTCTCTTTTTT  Raphanus sativus cv Rat-Tail Radish #3870
EY896045       --> TTTGTGTCGAACAAATCAAACACCCGGTCTGCAAACAAGCTCTCTTTTTT  Raphanus raphanistrum subsp. maritimus

               651    -    701
UN14407        --> ATTGGTCTTGAACAAGGCTAGTTGAAACTCTTCCTTGTTTATTAGCCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445888       <-- ..................................................  Raphanus sativus cv GSK3-1
EV548204       <-- ATTTGTCTTGAACAAGGCTAGTTGAAACTCTTCCTTGTTTATTAGCCCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541986       <-- ATTTGTCTTGAACAAGGCTAGTTGAAACTCTTCCTTGTTTATTAGCCCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900521       <-- ATTGGTCTTGAACAAGGCTAGTTGAAACTCTTCCTTGTTTATTAGCCCAT  Raphanus raphanistrum subsp. maritimus
EW716630       <-- ATTGGTCTTGAACAAGGCTAGTTGAAACTCTTCCTTGTTTATTAGCCCAT  Raphanus sativus var. oleiformis
FD954627       <-- ATTGGTCTTGAACAAGGCTAGTTGAAACTCTTCCTTGTTTATTAGCCCAT  Raphanus sativus cv Rat-Tail Radish #3870
EX902763       <-- ATTGGTCTTGAACAAGGCTAGTTGAAACTCTTCCTTGTTTATTAGCCCAT  Raphanus sativus cv Rat-Tail Radish #3870
EY939193       <-- ATTGGTCTTGAACAAGGCTAGTTGAAACTCTTCCTTGTTTATTAGCCCAT  Raphanus sativus cv Early Scarlet Globe
FD572088       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV543924       --> ATTTGTCTTGAACAAGGCTAGTTGAAACTCTTCCTTGTTTATTAGCCCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776616       --> ATCTGTCTTGAACAAGGCTAGTTGAAACTCTTCCTTGTTTATTAGCCCAT  Raphanus raphanistrum subsp. landra
FY431164       --> ATTGGTCTTGAACAAGGCTAGTTGAAACTCTTCCTTGTTTATTAGCCCAT  Raphanus sativus cv GSK3-1
EW720725       --> ATTGGTCTTGAACAAGGCTAGTTGAAACTCTTCCTTGTTTATTAGCCCAT  Raphanus sativus var. oleiformis
EY935176       --> ATTGGTCTTGAACAAGGCTAGTTGAAACTCTTCCTTGTTTATTAGCCCAT  Raphanus sativus cv Early Scarlet Globe
FD575802       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD950844       --> ATTGGTCTTGAACAAGGCTAGTTGAAACTCTTCCTTGTTTATTAGCCCAT  Raphanus sativus cv Rat-Tail Radish #3870
EY896045       --> ATTGGTCTTGAACAAGGCTAGTTGAAACTCTTCCTTGTTTATTAGCCCAT  Raphanus raphanistrum subsp. maritimus

               701    -    751
UN14407        --> CATCAATGACAGCACTGCTGATTTTCTTAAACAGCTCATAGAGAGCCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445888       <-- ..................................................
EV548204       <-- CATCAATGACAGCACTGCTGATTTTCTTAAACAGCTCATAGAGAGCCTCT
FD541986       <-- CATCAATGACAGCACTGCTGATTTTCTTAAACAGCTCATAGAGAGCCTCT
EY900521       <-- CATCAATGACAGCACTGCTGATTTTCTTAAACAGCTCATAGAGAGCCTCT
EW716630       <-- CATCAATGACAGCACTGCTGATTTTCTTAAACAGCTCATAGAGAGCCTCT
FD954627       <-- CATCAATGACAGCACTGCTGATTTTCTTAAACAGCTCATAGAGAGCCTCT
EX902763       <-- CATCAATGACAGCACTGCTGATTTTCTTAAACAGCTCATAGAGAGCCTCT
EY939193       <-- CATCAATGACAGCACCGCTGATTTTCTTAAACAGCTCATAGAGAGCCTCT
FD572088       <-- ..................................................
EV543924       --> CATCAATGACAGCACTGCTGATTTTCTTAAACAGCTCATAGAGAGCCTCT
EX776616       --> CATCAATGACAGCACTGCTGATTTTCTTAAACAGCTCATAGAGAGCCTCT
FY431164       --> CATCAATGACAGCACTGCTGATTTTCTTAAACAGCTCATAGAGAGCCTCT
EW720725       --> CATCAATGACAGCACTGCTGATTTTCTTAAACAGCTCATAGAGAGCCTCT
EY935176       --> CATCAATGACAGCACCGCTGATTTTCTTAAACAGCTCATAGAGAGCCTCT
FD575802       --> ..................................................
FD950844       --> CATCAATGACAGCACTGCTGATTTTCTTAAACAGCTCATAGAGAGCCTCT
EY896045       --> CATCAATGACAGCACTGCTGATTTTCTTAAACAGCTCATAGAGAGCCTCT

               751    -    801
UN14407        --> ATTTCACTCACGCTAAAAACTGTCTCTCTGGCAAGTAGTTCAGGATCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445888       <-- ..................................................
EV548204       <-- ATTTCACTCACGCTAAAAACTGTCTCTCTGGCAAGTAGTTCAGGATCTCC
FD541986       <-- ATTTCACTCACGCTAAAAAATGTCTCTCTGGCAAGTAGTTCAGGATCTCC
EY900521       <-- ATTTCACTCACGCTAAAAACTGTTTCTCTGGCAAGTAGTTCAGGATCTCC
EW716630       <-- ATTTCACTCACGCTAAAAACTGTCTCTCTGGCAAGTAGTTCAGGATCTCC
FD954627       <-- ATTTCACTCACGCTAAAAACTGTCTCTCTGGCAAGTAGTTCAGGATCTCC
EX902763       <-- ATTTCACTCACGCTAAAAACTGTCTCTCTGGCAAGTAGTTCAGGATCTCC
EY939193       <-- ATTTCACTCACGCTAAAAACTGTCTCTCTGGCAAGTAGTTCAGGATCTCC
FD572088       <-- ..................................................
EV543924       --> ATTTCACTCACGCTAAAAACTGTCTCTCTGGCAAGTAGTTCAGGATCTCC
EX776616       --> ATTTCACTCACG......................................
FY431164       --> ATTTCACTCACGCTAAAAACTGTTTCTCTGGCAAGTAG............
EW720725       --> ATTTCACTCACGCT....................................
EY935176       --> ATTTCACTCACGCTAAA.................................
FD575802       --> ..................................................
FD950844       --> ATTTCACTCACGC.....................................
EY896045       --> ATTTCACTCACGCTAAAAACTGTTTCTCTGGCAAGTAGTTCAGGATCTCC

               801    -    851
UN14407        --> AAGGCCTCCAGACTGTTTATATATCTCGATATCAAAACACCGAAACAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445888       <-- ..................................................
EV548204       <-- AAGGCCTCCAGACTGTTTATATATCTCGATATCAAAACACCGAAACAGAG
FD541986       <-- AAGGCCTCCAGACTGTTTATATATCTCGATATCAAAACACCGAAACAGAG
EY900521       <-- AAGGCCTCCAGACTGTTTATATATCTCGATATCAAAACACCGAAACAGAG
EW716630       <-- AAGGCCTCCAGACTGTTTATATATCTCGATATCAAAACACCGAAACAGAG
FD954627       <-- AAGGCCTCCAGGCTGTTTATATATCTCGATATCAAAACACCGAAACAGAG
EX902763       <-- AAGGCCTCCAGACTGTTTATATATCTCGATATCAAAACACCGAAACAGAG
EY939193       <-- AAGGCCTCCAGACTGTTTATATATCTCGATATCAAAACACCGAAACAGAG
FD572088       <-- ..........................................gAACAGAG
EV543924       --> AAGGCCT...........................................
EX776616       --> ..................................................
FY431164       --> ..................................................
EW720725       --> ..................................................
EY935176       --> ..................................................
FD575802       --> ..................................................
FD950844       --> ..................................................
EY896045       --> AAGGCCTCCAGACTGTTTATATATCTCGATATCAAAACACCGAAACAGAG

               851    -    901
UN14407        --> AGTTGCATACATGCTTGAATCCGTCTATGCACTGCGTCATGATATCTCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445888       <-- ..................................................
EV548204       <-- AGTTGCATACATGCTTGAATCCGTCTATGCACTGCGTCATGATATCTCTA
FD541986       <-- AGTTGCATACATGCTTGAATCCGTCTATGCACTGCGTCATGATATCTCTA
EY900521       <-- AGTTGCATACATGCTTGAATCCGTCTACGCACTGCGTCATGATATCTCTA
EW716630       <-- AGTTGCATACATGCTTGAATCCGTCTATGCACTGCGTCATGATATCTCTA
FD954627       <-- AGTTGCATACATGCTTGAATCCGTCTATGCACTGTGTCATGATATCTCTA
EX902763       <-- AGTTGCATACATGCTTGAATCCGTCTATGCACTGCGTCATGATATCTCTA
EY939193       <-- AGTTGCATACATGCTTGAATCCGTCTATGCACTGCGTCATGATATCTCTA
FD572088       <-- AGTTGCATACATGCTTGAATCCGTCTATGCACTGCGTCATGATATCTCTA
EV543924       --> ..................................................
EX776616       --> ..................................................
FY431164       --> ..................................................
EW720725       --> ..................................................
EY935176       --> ..................................................
FD575802       --> ..................................................
FD950844       --> ..................................................
EY896045       --> AGTTGCATACATGCTTGAATCCGTCTACGCACTGCGTCATGATATCTCTA

               901    -    951
UN14407        --> GTAAATCAAAACTCTCCATGACTTTTAACCATTTCCTAGTTCGTTAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445888       <-- ..................................................
EV548204       <-- GTAAATCAAAACTCTCCATGACTTTTAACCATTTCCTAGTTCGTTAAGAA
FD541986       <-- GCAAATCAAAACCCTCCATGACTTTTAACCACTTCCTAGTTCGTTAAGAA
EY900521       <-- GCAAATCAAAACTCTCCATAACTTTTAACCATTTCCTAGTTCGTTAAGAA
EW716630       <-- GTAAATCAAAACTCTCCATGACTTTTAACCATTTCCTAGTTCGTTAAGAA
FD954627       <-- GTAAATCAAAACTCTCCATGACTTTTAACCATTTCCTAGTTCGTTAAGAA
EX902763       <-- -AAAATCAAAACTCTCCATGACTTTTAACCATTTCCTAGTTCGTTAAGAA
EY939193       <-- GTAAATCAAAACTCTCCATGACTTTTAACCATTTCCTAGTTCGTTAAGAA
FD572088       <-- GTAAATCAAAACTCTCCATGACTTTTAACCATTTCCTAGTTCGTTAAGAA
EV543924       --> ..................................................
EX776616       --> ..................................................
FY431164       --> ..................................................
EW720725       --> ..................................................
EY935176       --> ..................................................
FD575802       --> ..................................................
FD950844       --> ..................................................
EY896045       --> Gca...............................................

               951    -   1001
UN14407        --> AGGCAAAAA-CACTTTGTAGACCTCAAAAAA-TATGCCACGGAGGATTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445888       <-- ..................................................
EV548204       <-- AGGCAAAAAaca......................................
FD541986       <-- AGGCAAAAA-CACTTTGTAGACCTCAAAAAAATATGCCACGGACGATTCC
EY900521       <-- AGGCAAAAAACACTTTGTAGACCTCAAAAAAATATGCCACGGACGATTCC
EW716630       <-- AGGCAAAAA-CACTTTGTAGACCTCAAAAAA-TATGCCACGGAGGATTCC
FD954627       <-- AGGCAAAAA-CACTTTGTAGACCTCAAAAAA-TATGCCACGGAGGATTCC
EX902763       <-- AGGCAAAAA-CACTTTGTAGACCTCAAAAAA-TATGCCACGGAGGATTCC
EY939193       <-- AGGCAAAAA-CACTTTGTAGACCTCAAAAAA-TATGCCACGGAGGATTCC
FD572088       <-- AGGCAAAAA-CACTTTGTAGACCTCAAAAAA-TATGCCACGGAGGATTCC
EV543924       --> ..................................................
EX776616       --> ..................................................
FY431164       --> ..................................................
EW720725       --> ..................................................
EY935176       --> ..................................................
FD575802       --> ..................................................
FD950844       --> ..................................................
EY896045       --> ..................................................

               1001   -   1051
UN14407        --> TTACGGCGACTCCGGAGGTTGAAGCTAGCGATTGTTGCGGTGGAGGTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY445888       <-- ..................................................
EV548204       <-- ..................................................
FD541986       <-- TTGCGGCGACTCCGGAGGTTGAAGCTGACGATTGTTGCGGTGGAGGTTGG
EY900521       <-- TTACGGCGACTCCGGAGGTTGAAGCTAGCGATTGTTGCGGTGGAGGTTGG
EW716630       <-- TTACGGCGACTCCGGAGGTTGAAGCTAGCGATTGTTGCGGTGGAGGTTGG
FD954627       <-- TTACGGCGACTCCGGAGGTTGAAGCTAGCGATTGTTGCGGTGGAGGTTGG
EX902763       <-- TTACGGCGACTCCGGAGGTTGAAGCTAGCGATTGTTGCGGTGGAGGTTGG
EY939193       <-- TTACGGCGACTCCGGAGGTTGAAGCTAGCGATTGTTGCGGTGGAGGTTGG
FD572088       <-- TTACGGCGACTCCGGAGGTTGAAGCTAGCGATTGTTGCGGTGGAGGTTGG
EV543924       --> ..................................................
EX776616       --> ..................................................
FY431164       --> ..................................................
EW720725       --> ..................................................
EY935176       --> ..................................................
FD575802       --> ..................................................
FD950844       --> ..................................................
EY896045       --> ..................................................

               1051   -   1101
UN14407        --> CACCAAAACAAACAAAAAAA
                   ~~~~~~~~~~~~~~~~~~~~
FY445888       <-- ....................
EV548204       <-- ....................
FD541986       <-- CACCAAAACGAACAAAAA..
EY900521       <-- CACCAAAACGAACAAAAA..
EW716630       <-- CACCAAAACAAAC.......
FD954627       <-- CACCAAAACAAACAAAAAAA
EX902763       <-- CACCAAAACAAACAAAAAAA
EY939193       <-- CACCAAAACAAACAAAAAAA
FD572088       <-- CACCAAAACAAACAAAAAAA
EV543924       --> ....................
EX776616       --> ....................
FY431164       --> ....................
EW720725       --> ....................
EY935176       --> ....................
FD575802       --> ....................
FD950844       --> ....................
EY896045       --> ....................