Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN14417

               1      -     51
UN14417        --> GGACATATCACTAACAAAAATACAAAACTTTAGCTTCAGTTTCTTTGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904631       <-- ..................................................
FD571414       --> GGACATATCACTAACAAAAATACAAAACTTTAGCTTCAGTTTCTTTGTGT
FD570703       --> .GACATATCACTAACAAAAATACAAAACTTTAGCTTCAGTTTCTTTGTGT
FY447527       --> ...........................gTTTAGCTTCAGTTTCTTTGTGT
EX770531       --> ..................................................
EV570040       --> ..................................................
FD559368       --> ..................................................

               51     -    101
UN14417        --> TACGTCTCCGACCAGAAAAAAAAGATGGGTGAAATCGGTGCCAAGCGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904631       <-- ..................................................
FD571414       --> TACGTCTCCGACCAGAAAAAAA-GATGGGTGAAATCGTTGCCAAGCGATG
FD570703       --> TACGTCTCCGACCAGAAAAAAAAGATGGGTGAAATCGGTGCCAAGCGATG
FY447527       --> TACGTCTCCGACCAGAAAAAAAAGATGGGTGAAATCGGTGCCAAGCGATG
EX770531       --> ..................................................
EV570040       --> ..................................................
FD559368       --> ..................................................

               101    -    151
UN14417        --> GAACTTCGGAGCCAACGTGGTGGTCGAACGTTCAAGCTCCCTAAGCATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904631       <-- ..................................................
FD571414       --> GAACTTCGGAGCCAACGTGGTGGTCGAACGTTCAAGCTCCCTAAGCATTC
FD570703       --> GAACTTCGGGGCCAACGTGGTGGTCGAACGTTCAAGCTCCCTAAGCATTC
FY447527       --> GAACTTCGGAGCCAACGTGGTGGTCGAACGTTCAAGCTCCCTAAGCATTC
EX770531       --> ..................................................
EV570040       --> ..................................................
FD559368       --> ..................................................

               151    -    201
UN14417        --> GTGAGTATCTTAATACCTTAATCAGTAATCTCAACGAAGGTGACACCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904631       <-- ..................................................
FD571414       --> GTGAGTATCTTAATACCTTAATCAGTAATCTCAACGAAGGTGACACCAGA
FD570703       --> GTGAGTATCTTAATACCTTAATCAGTAATCTCAACGAAGGTGACACCAGA
FY447527       --> GTGAGTATCTTAATACCTTAATCAGTAATCTCAACGAAGGTGACACCAGA
EX770531       --> ..................................................
EV570040       --> ..................................................
FD559368       --> ..................................................

               201    -    251
UN14417        --> CCCGTCATCGCCTTTGGAAATGGCGACCCTTCTCTGTTCCCGAGATTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904631       <-- ..................................................
FD571414       --> CCCGTCATCGCCTTTGGAAATGGCGACCCTTCTCTGTTCCCGAGATTCAG
FD570703       --> CCCGTCATCGCCTTTGGAAATGGCGACCCTTCTCTGTTCCCGAGATTCAG
FY447527       --> CCCGTCATCGCCTTTGGAAATGGCGACCCTTCTCTGTTCCCGAGATTCAG
EX770531       --> ..................................................
EV570040       --> ..................................................
FD559368       --> ..................................................

               251    -    301
UN14417        --> TACTGATCCATCAGCCGTTAAAGCCATATGTGATGCTGTTAGTTCCAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904631       <-- ..................................................
FD571414       --> TACTGATCCA---GCCGTTAAAGCCATATGTGATGCTGTTAGTTCCAACA
FD570703       --> TACTGATCCATCAGCCGTTAAAGCCATATGTGATGCTGTTAGTTCCAACA
FY447527       --> TACTGATCCATCAGCCGTTAAAGCCATATGTGATGCTGTTAGTTCCAACA
EX770531       --> ..................................................
EV570040       --> ..................................................
FD559368       --> ..................................................

               301    -    351
UN14417        --> AGTTTAACAACTATGCTTCTGCTTCCGGTATTCCTGTCGCTAGGAAAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904631       <-- ..................................................
FD571414       --> AGTTTAACAACTATGCTTCTGCTTCCGGTATTCCTGTCGCTAGGAAAGCC
FD570703       --> AGTTTAACAACTATGCTTCTGCTTCCGGTATTCCTGTCGCTAGGAAAGCC
FY447527       --> AGTTTAACAACTATGCTTCTGCTTCCGGTATTCCTGTCGCTAGGAAAGCC
EX770531       --> ..................................................
EV570040       --> ..................................................
FD559368       --> ..................................................

               351    -    401
UN14417        --> GTTGCAGAGTACCTTTCTCGCGATCTCTCTTACCAGATATCTCCAAAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904631       <-- ..................................................
FD571414       --> GTTGCAGAGTACCTTTCTCGCGATCTCTCTTACCAGATATCTCCAAAGGA
FD570703       --> GTTGCAGAGTACCTTTCTCGCGATCTCTCTTACCAGATATCTCCAAAGGA
FY447527       --> GTTGCAGAGTACCTTTCTCGCGATCTCTCTTACCAGATATCTCCAAAGGA
EX770531       --> ..................................................
EV570040       --> ..................................................
FD559368       --> ..................................................

               401    -    451
UN14417        --> TGTTCATATTACTTCTGGTTGTTTGCAAGCCGTTGAGATTTTGATCTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904631       <-- ..................................................
FD571414       --> TGTTCATATTACTTCTGGTTTTTTGCAAGCCGTTGAGATTTTGATCTCCT
FD570703       --> TGTTCATATTACTTCTGGTTGTTTGCAAGCCGTTGAGATTTTGATCTCCT
FY447527       --> TGTTCATATTACTTCTGGTTGTTTGCAAGCCGTTGAGATTTTGATCTCCT
EX770531       --> ...gCATATTACTTCGGGTTGTTTGCAAGCCATTGAGATTTTGATCTCCT
EV570040       --> ................................................CT
FD559368       --> ...............................................gCT

               451    -    501
UN14417        --> CACTCGCGAAACCTGGTGCCAACATTCTGCTGCCTAGGCCCACTTACCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904631       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD571414       --> CACTCGCGAAACCTGGTGCCAACATTCTGCTGCCTAGGCCCACTTACCCT  Raphanus sativus cv Early Scarlet Globe
FD570703       --> CACTCGCGAAACCTGGTGCCAACATTCTGCTGCCTAGGCCCACTTACCCT  Raphanus sativus cv Early Scarlet Globe
FY447527       --> CACTCGCGAAACCTGGTGCCAACATTCTGCTGCCTAGGCCCACTTACCCT  Raphanus sativus cv GSK3-1
EX770531       --> CACTCGCGAAACCTGGCGCCAACATTCTGCTGCCTAGGCCCATTTACCCT  Raphanus raphanistrum subsp. landra
EV570040       --> CACTCGCGAAACCTGGCGCCAACATTCTGCTGCCTAGGCCCACTTACCCT  Raphanus raphanistrum subsp. landra
FD559368       --> CACTCGCGAAACCTGGCGCCAACATTCTGCTGCCTAGGCCCACTTACCCT  Raphanus raphanistrum subsp. landra

               501    -    551
UN14417        --> ATGTATGATTCCAGAGCGTCTTTCAGTCAGCTAGAGATTCGTTATTTCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904631       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD571414       --> ATGTATGATTCCAGAGCGTCTTTCAGTCAGCTAGAGATTCGTTATTTCGA  Raphanus sativus cv Early Scarlet Globe
FD570703       --> ATGTATGATTCCAGAGCGTCTTTCAGTCAGCTAGAGATTCGTTATTTCGA  Raphanus sativus cv Early Scarlet Globe
FY447527       --> ATGTATGATTCCAGAGCGTCTTTCAGTCAGCTAGAGATTCGTTATTTCGA  Raphanus sativus cv GSK3-1
EX770531       --> ATGTATGACTCCAGAGCGTCTTTCAGTCATCTAGAGATTCGTTATTTCGA  Raphanus raphanistrum subsp. landra
EV570040       --> ATGTATGACTCCAGAGCGTCTTTCAGTCAGCTAGAGATTCGTTATTTCGA  Raphanus raphanistrum subsp. landra
FD559368       --> ATGTATGACTCCAGAGCGTCTTTCAGTCAGCTAGAGATTCGTTATTTCGA  Raphanus raphanistrum subsp. landra

               551    -    601
UN14417        --> CCTCCTACCAGAAAATGGTTGGGATGTTGATCTCGATGCTGTTGAAGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904631       <-- ..................................................
FD571414       --> CCTCCTACCAGAAAATGGTTGGGATGTTGATCTCGATGCTGTTGAAGCTC
FD570703       --> CCTCCTACCAGAAAATGGTTGGGATGTTGATCTCGATGCTGTTGAAGCTC
FY447527       --> CCTCCTACCAGAAAATGGTTGGGATGTTGATCTCGATGCTGTTGAAGCTC
EX770531       --> CCTCCTACCAGAAAATGGTTGGGATGTTGATCTCGATGCTGTTGAAGCTC
EV570040       --> CCTCCTACCAGAAAATGGTTGGGATGTTGATCTCGATGCTGTTGAAGCTC
FD559368       --> CCTCCTACCAGAAAATGGTTGGGATGTTGATCTCGATGCTGTTGAAGCTC

               601    -    651
UN14417        --> TTGCGGACGACAAAACCGTAGCTATAGTTGTTGTCAACCCTTGCAATCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904631       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD571414       --> TTGCAGACGACAAAACCGTAGCTATAGTTGCTGTCAACCCTTGCAATCCC  Raphanus sativus cv Early Scarlet Globe
FD570703       --> TTGCAGACGACAAAACCGTAGCTATAGTTGTTGTCAACCCTTGCAATCCT  Raphanus sativus cv Early Scarlet Globe
FY447527       --> TTGCAGACGACAAAACCGTAGCTATAGTTGTTGTCAACCCTTGCAATCCT  Raphanus sativus cv GSK3-1
EX770531       --> TTGCGGACGACAAAACCGTAGCTATAGTTGTTGTCAACCCTCGCAATCCG  Raphanus raphanistrum subsp. landra
EV570040       --> TTGCGGACGACAAAACCGTAGCTATAGTTGTTGTCAACCCTTGCAATCCG  Raphanus raphanistrum subsp. landra
FD559368       --> TTGCGGACGACAAAACCGTAGCTATAGTTGTTGTCAACCCTTGCAATCCG  Raphanus raphanistrum subsp. landra

               651    -    701
UN14417        --> TGTGGAAACGTTTTTTCTCGCCAACATCTTCAAAAGATTGCAGAGACAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904631       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD571414       --> TGTGGAAACGTTTTTTCTCGCCA-CATCTTCAAA-GATTGCAGAGACAGC  Raphanus sativus cv Early Scarlet Globe
FD570703       --> TGTGGAAACGTTTTTTCTCGCCAACATCTTCAAAAGATTACAGAGACAGC  Raphanus sativus cv Early Scarlet Globe
FY447527       --> TGTGGAAACGTTTTTTCTCGCCAACATCTTCAAAAGATTGCAGAGACAGC  Raphanus sativus cv GSK3-1
EX770531       --> TGTGGAAACGTTTTTGCTCGCCAACATCTTCAAAAGATTGCAGAGACAGC  Raphanus raphanistrum subsp. landra
EV570040       --> TGTGGAAACGTTTTTGCTCGCCAACATCTTCAAAAGATTGCAGAGACAGC  Raphanus raphanistrum subsp. landra
FD559368       --> TGTGGAAACGTTCTTGCTCGCCAACATCTTCAAAAGATTGCAGAGACAGC  Raphanus raphanistrum subsp. landra

               701    -    751
UN14417        --> TTGCAAGCTTGGAATACTTTTGATCGCAGACGAAGTTTATGATCATTATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904631       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD571414       --> TTGCAAGCTTGGAATACTTTTGATCGCAGACGAAGTTTATGATCATTATG  Raphanus sativus cv Early Scarlet Globe
FD570703       --> TTGCAAGCTTGGAATACTTTTGATCGCAGACGAAGTTTATGATCATTATG  Raphanus sativus cv Early Scarlet Globe
FY447527       --> TTGGCAGCTTGGAATACTTTTGATCGCAGACGAAGTTTATGATCATTATG  Raphanus sativus cv GSK3-1
EX770531       --> TTGCAAGCTTGGAATACTTTTGATCGCAGACGAAGTTTATGACCATTATG  Raphanus raphanistrum subsp. landra
EV570040       --> TTGCAAGCTTGGAATACTTTTGACCGCAGACGAAGTTTATGACCATTATG  Raphanus raphanistrum subsp. landra
FD559368       --> TTGCAAGCTTGGAATACTTTTGATCGCAGACGAAGTTTATGACCATTATG  Raphanus raphanistrum subsp. landra

               751    -    801
UN14417        --> CATTTGGGGATAAACCATTTGTGTCCATGGCAGAGTTTGCAGAGATAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904631       <-- ..........TAAACCATTTGTGTCCATGGCAGAGTTTGCAGAGATAGTG
FD571414       --> CATTTGGGGATAA--CATTTGTGTC-AT-GCAGAGTT-GCAGAGATAGTG
FD570703       --> CATTTGGGGATAAACCATTTGTGTCCATGGCAGAGTT-GCAGAGATAGTG
FY447527       --> CATTTGG...........................................
EX770531       --> CATTTGGGGATAAACCATTTGTGTCCATGGCAGAGTTTGCAGAGATAGTG
EV570040       --> CATTTGGGGATAAACCATTTGTGTCCATGGCAGAGTTTGCAGAGATAGTG
FD559368       --> CATTTGGGGATAAACCATTTGTGTCCATGGCAGAGTTTGCAGAGATAGTG

               801    -    851
UN14417        --> CCTGTAGTTTTGTTAGGCGCCATATCAAAAAGATGGTTTGTTCCTGGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904631       <-- CCTGTAGTTTTGTTAGGCGCCATATCAAAAAGATGGTTTGTTCCTGGCTG
FD571414       --> C-TGTAGTct........................................
FD570703       --> C-TGTAG...........................................
FY447527       --> ..................................................
EX770531       --> CCTGTAGCTTTGTTAGGCGCCATATCAAAAAGATGGTTTGTTCCTGGCTG
EV570040       --> CCTGTAGTTTTGTTAGGCGCCATATCAAAAAGATGGTTTGTTCCTGGCTG
FD559368       --> CCTGTAGTTTTGTTAGGCGCCATATCAAAAAGATGGTTTGTTCCTGGCTG

               851    -    901
UN14417        --> GAGACTTGGCTGGATGGTGACTCTTGACCCTCATAGCATCATGAAAGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904631       <-- GAGACTTGGCTGGATGGTGACTCTTGACCCTCATAGCATCATGAAAGATT
FD571414       --> ..................................................
FD570703       --> ..................................................
FY447527       --> ..................................................
EX770531       --> GAGACTTGGCTGGATGGTGACTCTTGACCCTCATAGCATCATGAAAGATT
EV570040       --> GAGACTTGGCTGGATGGTGACTCTTGACCCTCATAGCATCATGAAAGATT
FD559368       --> GAGACTTGGCTGGATGGTGACTCTTGACCCTCATAGCATCATGAAAGATT

               901    -    951
UN14417        --> CTGGGTTTCTTCAGTCTCTTACCAACGTCATCAACATTTCGACGGACGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904631       <-- CTGGGTTTCTTCAGTCTCTTACCAACGTCATCAACATTTCGACGGACGCT
FD571414       --> ..................................................
FD570703       --> ..................................................
FY447527       --> ..................................................
EX770531       --> CTGGGTTTCTTCAGTCTCTTACCAACGTCATCAACATTTCGACGGACGCT
EV570040       --> CTGGGTTTCTTCAGTCTCTTACCAACGTCATCAACATTTCGACGGACGCT
FD559368       --> CTGGGTTTCTTCAGTCTCTTACCAACGTCATCAACATTTCGACGGACGCT

               951    -   1001
UN14417        --> GCAACGTTCATTCAGGGTGCCATTCCTGATATCCTTGGGAATACGAAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904631       <-- GCAACGTTCATTCAGGGTGCCATTCCTGATATCCTTGGGAATACGAGAGA
FD571414       --> ..................................................
FD570703       --> ..................................................
FY447527       --> ..................................................
EX770531       --> GCAACGTTCATTCAGGGTGCCATTCCTGATATCCTTGGGAATACGAAAGA
EV570040       --> GCAACGTTCATTCAGGGTGCCATTCCTGATATCCTTGGGAATACGAAAGA
FD559368       --> GCAACGTTCATTCAGGGTGCCATTCCTGATATCCTTGGGAATACGAAAGA

               1001   -   1051
UN14417        --> AGAATTCTTCTCATTGAAACTTGAAAGGGTGAGAGAATGTGCAGAGATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904631       <-- AGAATTCTTCTCATTGAAACTTGAAAGGGTGAGAGAATGTGCAGAGATTT
FD571414       --> ..................................................
FD570703       --> ..................................................
FY447527       --> ..................................................
EX770531       --> AGAATTCTTCTCATTGAAACTTGAAAGGGTGAGAGAATGTGCAGAGATTT
EV570040       --> AGAATTCTTCTCATTGAAACTTGAAAGGGTGAGAGAATGTGCAGAGATTT
FD559368       --> AGAATTCTTCTCATTGAAACTTGAAAGGGTGAGAGAATGTGCAGAGATTT

               1051   -   1101
UN14417        --> GTTATGAAGAGATTATGAAGATCCCTTGCATCACTTGCCCCAGCAAACCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904631       <-- GTTATGAAGAGATTATGAAGATCCCATGCATCACTTGCCCCAGCAAACCC
FD571414       --> ..................................................
FD570703       --> ..................................................
FY447527       --> ..................................................
EX770531       --> GTTATGAAGAGATTATGAAGATCCCTTGCATCACTTGCCCCAGCAAACCC
EV570040       --> GTTATGAAGAGATTATGAAGATCCCTTGCATCACTTGCCCCAGCAAACCC
FD559368       --> GTTATGAAGAGATTATGAAGATCCCTTGCATCACTTGCCCCAGCAAACCC

               1101   -   1151
UN14417        --> -GAGGGATCAATGTTCACGATGGTGAAGTTAAACCTCTCGCTACTCGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904631       <-- -GAGGGATCAATGTTCACGATGGTGAAGTTAAACCTGTCGCTACTCGGAG
FD571414       --> ..................................................
FD570703       --> ..................................................
FY447527       --> ..................................................
EX770531       --> -GAGGGATCAATGTTCACGATGGTGAAGTTAAACCTCTCGCTACTCGGAG
EV570040       --> CGAGGGATCAATGTTCACGATGGTGAAGTTAAACCTCTCGCTACTCGGAG
FD559368       --> -GAGGGATCAATGTTCACGATGGTGAAGTTAAACCTCTCGCTACTCGGAG

               1151   -   1201
UN14417        --> ATATCAGTGATGATTTGGACTTCTGCTGCAAGCTGGCTAAAGAGGAATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904631       <-- ATATCAGTGATGATTTGGACTTCTGCTGCAAGCTGGCTAAAGAGGAATCG
FD571414       --> ..................................................
FD570703       --> ..................................................
FY447527       --> ..................................................
EX770531       --> ATATCAGTGATGATTTGGACT-CTGCTGCAgctg................
EV570040       --> ATATCAGTGATGATTTGGACTTCTGCTGCAAGCTGGCTAAAGAGGA-TCG
FD559368       --> ATATCAGTGATGATTTGGACTTCTGCTGCA-GCTGGC.............

               1201   -   1251
UN14417        --> TTGATCATCCTACCAGGTCGAGCTGTTGGGCTCAAGAACTGGCTACGTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904631       <-- TTGATCATCCTACCAGGTCGAGCTGTTGGGCTCAAGAACTGGCTACGTAT
FD571414       --> ..................................................
FD570703       --> ..................................................
FY447527       --> ..................................................
EX770531       --> ..................................................
EV570040       --> TTGATCATCCTACCAGGTCGAGCTGTTGGGCTCA-GAACTGGCTACGTAT
FD559368       --> ..................................................

               1251   -   1301
UN14417        --> CACTTTTGCTGTTGAGCTCGATCTCCTCATTGACGGCTTTTCCAGGCTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904631       <-- CACTTTTGCTGTTGAGCTCGATCTCCTCATTGACGGCTTTTCCAGGCTAA
FD571414       --> ..................................................
FD570703       --> ..................................................
FY447527       --> ..................................................
EX770531       --> ..................................................
EV570040       --> CACTTT............................................
FD559368       --> ..................................................

               1301   -   1351
UN14417        --> AGAACTTTGCCCAGAGACACTCCAAGAAAAACCCATGAGTGTTAAGTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904631       <-- AGAACTTTGCCCAGAGACACTCCAAGAAAAACCCATGAGTGTTAAGTCTC
FD571414       --> ..................................................
FD570703       --> ..................................................
FY447527       --> ..................................................
EX770531       --> ..................................................
EV570040       --> ..................................................
FD559368       --> ..................................................

               1351   -   1401
UN14417        --> TCTCTCCTTCTCAATAGTCAAAGCAATTTCTTGCTTAGAAACTTCAAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904631       <-- TCTCTCCTTCTCAATAGTCAAAGCAATTTCTTGCTTAGAAACTTCAAACT
FD571414       --> ..................................................
FD570703       --> ..................................................
FY447527       --> ..................................................
EX770531       --> ..................................................
EV570040       --> ..................................................
FD559368       --> ..................................................

               1401   -   1451
UN14417        --> TCTAAAACAAGACATTGTAATAACTAGTAAGCTTTGTTTTTCTTTGAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904631       <-- TCTAAAACAAGACATTGTAATAACTAGTAAGCTTTGTTTTTCTTTGAACA
FD571414       --> ..................................................
FD570703       --> ..................................................
FY447527       --> ..................................................
EX770531       --> ..................................................
EV570040       --> ..................................................
FD559368       --> ..................................................

               1451   -   1501
UN14417        --> AAAATATGAACCAAGTGATGCCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~
EY904631       <-- AAAATATGAACCAAGTGATGCCAAG
FD571414       --> .........................
FD570703       --> .........................
FY447527       --> .........................
EX770531       --> .........................
EV570040       --> .........................
FD559368       --> .........................