RadishBase

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Alignment for radish unigene UN14438

               1      -     51
UN14438        --> CGACACAAGACAATACATATATTTTCATTAACTTCTTACTTTGTAGAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550923       <-- CGACACAAGACAATACATATATTTTCATTAACTTCTTACTTTGTAGAAAC
EW724875       <-- .......................TTCATTAACTTCTTACTTTGTAGAAAC
FD938390       <-- ..................................................
FD578329       <-- ..................................................
EW726519       <-- ..................................................
FD958262       <-- ..................................................
FD559211       <-- ..................................................
EX772694       <-- ..................................................
FD955286       <-- ..................................................
EW714830       <-- ..................................................
FD571198       <-- ..................................................
FD577523       <-- ..................................................
EX902197       <-- ..................................................
EV546118       --> CGACACAAGACAATACATATATTTTCATTAACTTCTTACTTTGTAGAAAC
EX906520       --> .........................CATTAACTTCTTACTTTGTAGAAAC
FD581813       --> ..................................................
FD554954       --> ..................................................
FD582503       --> ..................................................
EW730667       --> ..................................................
FD953782       --> ..................................................
EX776584       --> ..................................................
FD575065       --> ..................................................
FD951361       --> ..................................................
EW718976       --> ..................................................
FD546985       --> ..................................................

               51     -    101
UN14438        --> ACTGACTATAAAGGATATGACGATAATAGCTAAAAACACAACTCCTGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550923       <-- ACTGACTATAAAGGATATGACGATAATAGCTAAGAACACAACTCCTGTGT
EW724875       <-- ACTGACTATAAAGGATATGACGATAACAGCTAAGAACACAACTCCTGTGT
FD938390       <-- ..................................................
FD578329       <-- ..................................................
EW726519       <-- ..................................................
FD958262       <-- ..................................................
FD559211       <-- ..................................................
EX772694       <-- ..................................................
FD955286       <-- ..................................................
EW714830       <-- ..................................................
FD571198       <-- ..................................................
FD577523       <-- ..................................................
EX902197       <-- ..................................................
EV546118       --> ACTGACTATAAAGGATATGACGATAATAGCTAAAAACACAACTCCTGTGT
EX906520       --> ACTGACTATAAAGGATATGACGATAATAGCTAAAAACACAACTCCTGTGT
FD581813       --> ........................AATAGCTAAAAACACAACTCCTGTGT
FD554954       --> ...............................aagAACACAACTCCTGTGT
FD582503       --> ..................................................
EW730667       --> ..................................................
FD953782       --> ..................................................
EX776584       --> ..................................................
FD575065       --> ..................................................
FD951361       --> ..................................................
EW718976       --> ..................................................
FD546985       --> ..................................................

               101    -    151
UN14438        --> TCATTTGTGCATCTGGCAGGGACATACATATCTCATTGTAATTTAGATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550923       <-- TCATTTGTGCATCTGGCAGGGACATACATATCTCATTGTAATTTAGATTT
EW724875       <-- TCATTTGTGCATCTGGCAGGGACATACATATCTCATTGTAATGTAGATTT
FD938390       <-- ........GCATCTG-CA-GGACATACATATCTCAT-GT-ATGTAGATTT
FD578329       <-- ..................................................
EW726519       <-- ..................................................
FD958262       <-- ..................................................
FD559211       <-- ..................................................
EX772694       <-- ..................................................
FD955286       <-- ..................................................
EW714830       <-- ..................................................
FD571198       <-- ..................................................
FD577523       <-- ..................................................
EX902197       <-- ..................................................
EV546118       --> TCATTTGTGCATCTGGCAGGGACATACATATCTCATTGTAATTTAGATTT
EX906520       --> TCATTTGTGCATCTGGCAGGGACATACATATCTCATTGTAATTTAAATTT
FD581813       --> TCATTTGTGCATCTGGCAGGGACATACATATCTCATTGTAATTTAGATTT
FD554954       --> TCATTTGTGCATCTGGCAGGGACATACATATCTCATTGTAATTTAGATTT
FD582503       --> ..................................................
EW730667       --> ..................................................
FD953782       --> ..................................................
EX776584       --> ..................................................
FD575065       --> ..................................................
FD951361       --> ..................................................
EW718976       --> ..................................................
FD546985       --> ..................................................

               151    -    201
UN14438        --> TGAGTTATAAGCAGAGAGAAGAAATAAAAAGCAGAATGGTTGAATCTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550923       <-- TGAGTTATAAGCAGAGAGAAGAAATAAAAAGCAGAATGGTTGAATCTTTA
EW724875       <-- TGAGTTATAAGCAGAGAGAAGAAATAAAAAGCAGAATGGTTGAATCTTTA
FD938390       <-- -GAGTTATA-GCAGAGAGAAGAAATAAAAAGCAGAATGGTTGAATCTTTA
FD578329       <-- ..............ttttttttggTAAAAAGCAGAATGGTTGAATCTTTA
EW726519       <-- ..........................agAAGCAGAATG-TTG-ATCTTTA
FD958262       <-- ...........................tAAGCAGAATGGTTGAATCTTTA
FD559211       <-- ...............................CAGAATGGTTGAATCTTTA
EX772694       <-- .................................................t
FD955286       <-- ..................................................
EW714830       <-- ..................................................
FD571198       <-- ..................................................
FD577523       <-- ..................................................
EX902197       <-- ..................................................
EV546118       --> TGAGTTATAAGCAGAGAGAAGAAATAAAAAGCAGAATGGTTGAATCTTTA
EX906520       --> TGAGTTATAAGCAGAAAGAAAAAATAAAAAGCAAAATGGTTGAATCTTTA
FD581813       --> TGAGTTATAAGCAGAGAGAAGAAATAAAAAGCAGAATGGTTGAATCTTTA
FD554954       --> TGAGTTATAAGCAGAGAGAAGAAATAAAAAGCAGAATGGTTGAATCTTTA
FD582503       --> ......................ggTAAAAAGCAGAATGGTTGAATCTTTA
EW730667       --> .........................agAAAGCAGAATGGTTGAATCTTTA
FD953782       --> ............................AAGCAGAATGGTTGAATCTTTA
EX776584       --> ............................gAGCAGAATGGTTGAATCTTTA
FD575065       --> .............................AGCAAAATGGTTGAATCTTTA
FD951361       --> .............................AGCAGAATGGTTGAATCTTTA
EW718976       --> ..............................GCAGAATGGTTGAATCTTTA
FD546985       --> ..................................................

               201    -    251
UN14438        --> TTAAGTGGCTAAACATAGTCGTTTGAAAAA-CAAAAGTCTTCAAATCACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550923       <-- TTAAGTGGCTAAACATAGTCGTTTGGAAAA-CAAAAGTCTTCAAATCACT
EW724875       <-- TTAAGTGGCTAAACATAGTCGTTTGAAAAAACAAAAGTCTTCAAATCACT
FD938390       <-- TTAAGTGGCTAAACATAGTCGTT-GAAAAA-CAAAAGTCTTCAAATCACT
FD578329       <-- TTAAGTGGCTAAACATAGTCGTTTGAAAAA-CAAAAGTCTTCAAATCACT
EW726519       <-- T-AAGTG-CTAAACATAGTCGTTTGAAAAA-CAAA-GTCTTCAAATCACT
FD958262       <-- TTAAGTGGCTAAACATAGTCGTTTGAAAAA-CAAAAGTCTTCAAATCACT
FD559211       <-- TTAAGTG-CTAAACATAGTCGTT-GAAAAA-CAAAAGTCTTCAAATCACT
EX772694       <-- aTAAGTGG-TAAACATAGTCGTT-GAAAA--CAAAAGTCTTCAAATCACT
FD955286       <-- ..........AAACATAGTCGTT-GAAAAA-CAAAAGTCTTCAAATCACT
EW714830       <-- ..........................AAAA-CAAAAGTCTTCAAATCACT
FD571198       <-- ............................AA-CAAAAGTCTTCAAATCACT
FD577523       <-- ...............................CAAAAGTCTTCAAATCACT
EX902197       <-- ..................................................
EV546118       --> TTAAGTGGCTAAACATAGTCGTTTGGAAAA-CAAAAGTCTTCAAATCACT
EX906520       --> TTAAGTGGCTAAACATAGTCGTTTGAAAAA-CAAAAGTCTTCAAATCACT
FD581813       --> TTAAGTGGCTAAACATAGTCGTTTGAAAAA-CAAAAGTCTTCAAATCACT
FD554954       --> TTAAGTGGCTAAACATAGTCGTTTGAAAAA-CAAAAGTCTTCAAATCACT
FD582503       --> TTAAGTGGCTAAACATAGTCGTTTGAAAAAACAAAAGTCTTCAAATCACT
EW730667       --> TTAAGTGGCTAAACATAGTCGTTTGAAAAAACAAAAGTCTTCAAATCACT
FD953782       --> TTAAGTGGCTAAACATAGTCGTTTGAAAAAACAAAAGTCTTCAAATCACT
EX776584       --> TTAAGTGGTTAAACATAGTCGTTTGAAAAA-CAAAAGTCTTCAAATCACT
FD575065       --> TTAAGTGGCTAAACATAGTCGTTTGAAAAAACAAAAGTCTTCAAATCACT
FD951361       --> TTAAGTGGCTAAACATAGTCGTTTGAAAAAACAAAAGTCTTCAAATCACT
EW718976       --> TTAAGTGGCTAAACATAGTCGTTTGAAAAAACAAAAGTCTTCAAATCACT
FD546985       --> ..................................................

               251    -    301
UN14438        --> AAGCTCACAGCAATGGATGATCAGATGGAGAAAACTTCATGAGAAGTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550923       <-- AAGCTCACAGCAATGGATGATCAGATGGAGAAAACTACATGAGAAGTTGA
EW724875       <-- AAGCTCACAGCAATGGATGATCAGATGGAGAAAACTTCATGAGAAGTTGA
FD938390       <-- AAGCTCACAGCAATGGATGATCAGATGGAGAAAACTTCATGAGAAGTTGA
FD578329       <-- AAGCTCACAGCAATGGATGATCAGATGGAGAAAACTTCATGAGAAGTTGA
EW726519       <-- AAGCTCACAGCAATGGATGATCAGATGGAGAAAACT-CATGAGAAGT-GA
FD958262       <-- AAGCTCACAGCAATGGATGATCAGATGGAGAAAACTTCATGAGAAGTTGA
FD559211       <-- AAGCTCACAGCAATGGATGATCAGATGGAGAAAACTTCATGAGAAGTTGA
EX772694       <-- AAGCTCACAGCAATGGATGATCAGATG-AGAAA-CTTCATGAGAAGTTGA
FD955286       <-- AAGCTCACAGCAATGGATGATCAGATGGAGAAAACTTCATGAGAAGTTGA
EW714830       <-- AAGCTCACAGCAATGGATGATCAGATGGAGAAAACTTCATGAGAAGTTGA
FD571198       <-- AAGCTCACAGCAATGGATGATCAGATGGAGAAAACTTCATGAGAAGTTGA
FD577523       <-- AAGCTCACAGCAATGGATGATCAGATGGAGAAAACTTCATGAGAAGTTGA
EX902197       <-- AAGCTCACAGCAATGGATGATCAGATGGAGAAAACTTCATGAGAAGTTGA
EV546118       --> AAGCTCACAGCAATGGATGATCAGATGGAGAAAACTACATGAGAAGTTGA
EX906520       --> AAGCTCACAGCAATGGATGATCAGATGGAGAAAACTTCATGAGAAGTTGA
FD581813       --> AAGCTCACAGCAATGGATGATCAGATGGAGAAAACTTCATGAGAAGTTGA
FD554954       --> AAGCTCACAGCAATGGATGATCAGATGGAGAAAACTTCATGAGAAGTTGA
FD582503       --> AAGCTCACAGCAATGGATGATCAGATGGAGAAAACTTCATGAGAAGTTGA
EW730667       --> AAGCTCACAGCAATGGATGATCAGATGGAGAAAACCTCATGAGAAGTTGA
FD953782       --> AAGCTCACAGCAATGGATGATCAGATGGAGAAAACTTCATGAGAAGTTGA
EX776584       --> AAGCTCACAGCAATGGATGATCAGATGGAGAAAACTTCATGAGAAGTTGA
FD575065       --> AAGCTCACAGCAATGGATGATCAGATGGAAAAAACTTCATGAAAAGTTGA
FD951361       --> AAGCTCACAGCAATGGATGATCAGATGGAGAAAACTTCATGAGAAGTTGA
EW718976       --> AAGCTCACAGCAATGGATGATCAGATGGAGAAAACTTCATGAGAAGTTGA
FD546985       --> ..................................................

               301    -    351
UN14438        --> GAGTTACAGAGGAAGCTCACCACTGTCAACAATCACAACTTTACTCTTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550923       <-- GAGTTACAGAGGAAGCTCACCACTGTCAACAATCACAACTTTACTCTTAG
EW724875       <-- GAGTTACAGAGGAAGCTCACCACTGTCAACAATCACAACTTTACTCTTAG
FD938390       <-- GAGTTACAGAGGAAGCTCACCACTGTCAACAATCACAACTTTACTCTTAG
FD578329       <-- GAGTTACAGAGGAAGCTCACCACTGTCAACAATCACAACTTTACTCTTAG
EW726519       <-- GAGTTACAGTGGAAGCTCACCACTGTCAACAATCACAACTTTACTCTTAG
FD958262       <-- GAGTTACAGAGGAAGCTCACCACTGTCAACAATCATAACTTTACTCTTAG
FD559211       <-- GAGTTACAGAGGAAGCTCACCACTGTCAACAATCACAACTTTACTCTTAG
EX772694       <-- GAGTTACAGAGGAAGCTCACCACTGTCAACAATCACAACTTTACTCTTAG
FD955286       <-- GAGTTACAGAGGAAGCTCACCACTGTCAACAATCACAACTTTACTCTTAG
EW714830       <-- GAGTTACAGAGGAAGCTCACCACTGTCAACAATCACAACTTTACTCTTAG
FD571198       <-- GAGTTACAGAGGAAGCTCACCACTGTCAACAATCACAACTTTACTCTTAG
FD577523       <-- GAGTTACAGAGGAAGCTCACCACTGTCAGCAATCACAACTTTACTCTTAG
EX902197       <-- GAGTTACAGAGGAAGCTCACCACTGTCAGCAATAACAACTTTACTCTTAG
EV546118       --> GAGTTACAGAGGAAGCTCACCACTGTCAACAATCACAACTTTACTCTTAG
EX906520       --> GAGTTACAGAGGAAGCTCACCACTGTCAGCAATAACAACTTTACTCTTAG
FD581813       --> GAGTTACAGAGGAAGCTCACCACTGTCAGCAATCACAACTTTACTCTTAG
FD554954       --> GAGTTACAGAGGAAGCTCACCACTGTCAACAATCACAACTTTACTCTTAG
FD582503       --> GAGTTACAGAGGAAGCTCACCACTGTCAACAATCACAACTTTACTCTTAG
EW730667       --> GAGTTACAGTGGAAGCTCACCACTGTCAACAATCACAACTTTACTCTTAG
FD953782       --> GAGTTACAGAGGAAGCTCACCACTGTCAACAATCATAACTTTACTCTTAG
EX776584       --> GAGTTACAGAGGAAGCTCACCACTGTCAACAATCACAACTTTACTCTTAG
FD575065       --> AAGTTACAGAGGAAGCTCACCACTGTCAACAATCACAACTTTACTCTTAG
FD951361       --> GAGTTACAGAGGAAGCTCACCACTGTCAACAATCACAACTTTACTCTTAG
EW718976       --> GAGTTACAGAGGAAGCTCACCACTGTCAACAATCACAACTTTACTCTTAG
FD546985       --> ....TACAGAGGAAGCTCACCACTGTCAACAATCACAACTTTACTCTTAG

               351    -    401
UN14438        --> GAGTTCCACTCTGAGTACCCTCAGCTTCGATTTTGTACACCACGTCCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550923       <-- GAGTTCCACTCTGAGTACCCTCAGCTTCGATTTCGTACACCACGTCCATT
EW724875       <-- GAGTTCCACTCTGAGTACCCTCAGCTTCGATTTTGTACACCACGTCCATT
FD938390       <-- GAGTTCCACTCTGAGTACCCTCAGCTTCGATTTTGTACACCACGTCCATT
FD578329       <-- GAGTTCCACTCTGAGTACCCTCAGCTTCGATTTTGTACACCACGTCCATT
EW726519       <-- GAGTTCCACTCTGAGTACCCTCAGCTTCGATTTTGTACACCACGTCCATT
FD958262       <-- GAGTTCCACTCTGAGTACCCTCAGCTTCGATTTTGTACACCACGTCCATT
FD559211       <-- GAGTTCCACTCTGAGTACCCTCAGCTTCGATTTTGTACACCACGTCCATT
EX772694       <-- GAGTTCCACTCTGAGTACCCTCAGCTTCGATTTTGTACACCACGTCCATT
FD955286       <-- GAGTTCCACTCTGAGTACCCTCAGCTTCGATTTTGTACACCACGTCCATT
EW714830       <-- GAGTTCCACTCTGAGTACCCTCAGCTTCGATTTTGTACACCACGCCCATT
FD571198       <-- GAGTTCCACTCTGAGTACCCTCAGCTTCGATTTTGTACACCACGTCCATT
FD577523       <-- GAGTTCCACTCTGAGTACCCTCAGCTTCGATTTTGTACACCACGTCCATT
EX902197       <-- GAGTTCCACTCTGAGTACCCTCAGCTTCGATTTTGTACACCACGTCCATT
EV546118       --> GAGTTCCACTCTGAGTACCCTCAGCTTCGATTTCGTACACCACGTCCATT
EX906520       --> GAGTTCCACTCTGAGTACCCTCAGCTTCGATTTTGTACACCACGTCCATT
FD581813       --> GAGTTCCACTCTGAGTACCCTCAGCTTCGATTTTGTACACCACGTCCATT
FD554954       --> GAGTTCCACTCTGAGTACCCTCAGCTTCGATTTTGTACACCACGTCCATT
FD582503       --> GAGTTCCACTCTGAGTACCCTCAGCTTCGATTTTGTACACCACGTCCATT
EW730667       --> GAGTTCCACTCTGAGTACCCTCAGCTTCGATTTTGTACACCACGTCCATT
FD953782       --> GAGTTCCACTCTGAGTACCCTCAGCTTCGATTTTGTACACCACGTCCATT
EX776584       --> GAGTTCCACTCTGAGTACCCTCAGCTTCGATTTTGTACACCACGTCCATT
FD575065       --> GAGTTCCACTCTGAGTACCCTCAGCTTCGATTTTGTACACCACGTCCATT
FD951361       --> GAGTTCCACTCTGAGTACCCTCAGCTTCGATTTTGTACACCACGTCCATT
EW718976       --> GAGTTCCACTCTGAGTACCCTCAGCTTCGATTTTGTACACCACGCCCATT
FD546985       --> GAGTTCCACTCTGAGTACCCTCAGCTTCGATTTTGTACACCACGTCCATT

               401    -    451
UN14438        --> CCTGTAACTACCTTCCCGAACACTACGTGCCTCCCGTCCAACCAGCTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550923       <-- CCTGTCACTACCTTCCCGAACACTACGTGCCTCCCGTCCAACCAGCTTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724875       <-- CCTGTAACTACCTTCCCGAACACTACGTGCCTCCCGTCCAACCAGCTTGT  Raphanus sativus cv Early Scarlet Globe
FD938390       <-- CCTGTAACTACCTTCCCGAACACTACGTGCCTCCCGTCCAACCAGCTTGT  Raphanus sativus var. oleiformis
FD578329       <-- CCTGTAACTACCTTCCCGAACACTACGTGCCTCCCGTCCAACCAGCTTGT  Raphanus sativus cv Rat-Tail Radish #3870
EW726519       <-- CCTGTAACTACCTTCCCGAACACTACGTGCCTCCCGTCCAACCAGCTTGT  Raphanus sativus cv Early Scarlet Globe
FD958262       <-- CCTGTAACTACCTTCCCGAACACTACGTGCCTCCCGTCCAACCAGCTTGT  Raphanus sativus cv Rat-Tail Radish #3870
FD559211       <-- CCTGTCACTACCTTCCCGAACACTACGTGCCTCCCGTCCAACCAGCTTGT  Raphanus raphanistrum subsp. landra
EX772694       <-- CCTGTCACTACCTTCCCGAACACTACGTGCCTCCCGTCCAACCAGCTTGT  Raphanus raphanistrum subsp. landra
FD955286       <-- CCTGTAACTACCTTCCCGAACACTACGTGCCTCCCGTCCAACCAGCTTGT  Raphanus sativus cv Rat-Tail Radish #3870
EW714830       <-- CCTGTAACTACCTTCCCGAACACTACGTGCCTCCCGTCCAACCAGCTTGT  Raphanus sativus var. oleiformis
FD571198       <-- CCTGTAACTACCTTCCCGAACACTACGTGCCTCCCGTCCAACCAGCTTGT  Raphanus sativus cv Early Scarlet Globe
FD577523       <-- CCTGTAACTACCTTCCCGAACACTACGTGCCTCCCGTCCAACCAGCTTGT  Raphanus sativus cv Rat-Tail Radish #3870
EX902197       <-- CCTGTAACTACCTTCCCGAACACTACGTGCCTCCCGTCCAACCAGCTTGT  Raphanus sativus cv Rat-Tail Radish #3870
EV546118       --> CCTGTCACTACCTTCCCGAACACTACGTGCCTCCCGTCCAACCAGCTTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX906520       --> CCTGTAACTACCTTCCCGAACACTACGTGCCTCCCGTCCAACCAGCTTGT  Raphanus sativus cv Rat-Tail Radish #3870
FD581813       --> CCTGTAACTACCTTCCCGAACACTACGTGCCTCCCGTCCAACCAGCTTGT  Raphanus sativus cv Rat-Tail Radish #3870
FD554954       --> CCTGTCACTACCTTCCCGAACACTACGTGCCTCCCGTCCAACCAGCTTGT  Raphanus raphanistrum subsp. landra
FD582503       --> CCTGTAACTACCTTCCCGAACACTACGTGCCTCCCGTCCAACCAGCTTGT  Raphanus sativus cv Rat-Tail Radish #3870
EW730667       --> CCTGTAACTACCTTCCCGAACACTACGTGCCTCCCGTCCAACCAGCTTGT  Raphanus sativus cv Early Scarlet Globe
FD953782       --> CCTGTAACTACCTTCCCGAACACTACGTGCCTCCCGTCCAACCAGCTTGT  Raphanus sativus cv Rat-Tail Radish #3870
EX776584       --> CCTGTCACTACCTTCCCGAACACTACGTGCCTCCCGTCCAACCAGCTTGT  Raphanus raphanistrum subsp. landra
FD575065       --> CCTGTAACTACCTTCCCGAACACTACGTGCCTCCCGTCCAACCAGCTTGT  Raphanus sativus cv Early Scarlet Globe
FD951361       --> CCTGTAACTACCTTCCCGAACACTACGTGCCTCCCGTCCAACCAGCTTGT  Raphanus sativus cv Rat-Tail Radish #3870
EW718976       --> CCTGTAACTACCTTCCCGAACACTACGTGCCTCCCGTCCAACCAGCTTGT  Raphanus sativus var. oleiformis
FD546985       --> CCTGTAACTACCTTCCCGAACACTACGTGCCTCCCGTCCAACCAGCTTGT  Raphanus raphanistrum subsp. raphanistrum (NY)

               451    -    501
UN14438        --> TGTAACTGTTGTGATGAAAAACTGTGATCCGTTGGTGTCTTCACCGGCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550923       <-- TGTAACTGTTGTGATGAAAAACTGTGATCCGTTGGTGTCTTCACCGGCGT
EW724875       <-- TGTAACTGTTGTGATGAAAAACTGTGATCCGTTGGTGTCTTCACCGGCGT
FD938390       <-- TGTAACTGTTGTGATGAAAAACTGTGATCCGTTGGTGTCTTCACCGGCGT
FD578329       <-- TGTAACTGTTGTGATGAAAAACTGTGATCCGTTGGTGTCTTCACCGGCGT
EW726519       <-- TGTAACTGTTGTGATGAAAAACTGTGATCCGTTGGTGTCTTCACCGGCGT
FD958262       <-- TGTAACTGTTGTGATGAAAAACTGTGATCCGTTGGTGTCTTCACCGGCGT
FD559211       <-- TGTAACTGTTGTGATGAAAAACTGTGATCCGTTGGTGTCTTCACCGGCGT
EX772694       <-- TGTAACTGTTGTGATGAAAAACTGTGATCCGTTGGTGTCTTCACCGGCGT
FD955286       <-- TGTAACTGTTGTGATGAAAAACTGTGATCCGTTGGTGTCTTCACCGGCGT
EW714830       <-- TGTAACTGTTGTGATGAAAAACTGTGATCCGTTGGTGTCTTCACCGGCGT
FD571198       <-- TGTAACTGTTGTGATGAAAAACTGTGATCCGTTGGTGTCTTCACCGGCGT
FD577523       <-- TGTAACTGTTGTGATGAAAAACTGTGATCCGTTGGTGTCTTCACCGGCGT
EX902197       <-- TGTAACTGTTGTGAT-AAAAACTGTGATCCGTTGGTGTCTTCACCGGCGT
EV546118       --> TGTAACTGTTGTGATGAAAAACTGTGATCCGTTGGTGTCTTCACCGGCGT
EX906520       --> TGTAACTGTTGTGAT-AAAAACTGTGATCCGTTGGTGTCTTCACCGGCGT
FD581813       --> TGTAACTGTTGTGATGAAAAACTGTGATCCGTTGGTGTCTTCACCGGCGT
FD554954       --> TGTAACTGTTGTGATGAAAAACTGTGATCCGTTGGTGTCTTCACCGGCGT
FD582503       --> TGTAACTGTTGTGATGAAAAACTGTGATCCGTTGGTGTCTTCACCGGCGT
EW730667       --> TGTAACTGTTGTGATGAAAAACTGTGATCCGTTGGTGTCTTCACCGGCGT
FD953782       --> TGTAACTGTTGTGATGAAAAACTGTGATCCGTTGGTGTCTTCACCGGCGT
EX776584       --> TGTAACTGTTGTGATGAAAAACTGTGATCCGTTGGTGTCTTCACCGGCGT
FD575065       --> TGTAACTGTTGTGATGAAAAACTGTGATCCGTTGGTGTCTTCACCGGCGT
FD951361       --> TGTAACTGTTGTGATGAAAAACTGTGATCCGTTGGTGTCTTCACCGGCGT
EW718976       --> TGTAACTGTTGTGATGAAAAACTGTGATCCGTTGGTGTCTTCACCGGCGT
FD546985       --> TGTAACTGTTGGGATGAAAAACTGGGATCCGTTGGTGTCTTCCCCGGCGT

               501    -    551
UN14438        --> TTGCCATTGATAGATACCCTGGACCAGTATGCTTGAGTTTGAAGTTCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550923       <-- TTGCCATTGATAGATACCCTGGACCAGTATGCTTGAGTTTGAAGTTCTCA
EW724875       <-- TTGCCATTGATAGATACCCTGGACCAGTATGCTTGAGTTTGAAGTTCTCA
FD938390       <-- TTGCCATTGATAGATACCCTGGACCAGTATGCTTGAGTTTGAAGTTCTCA
FD578329       <-- TTGCCATTGATAGATACCCTGGACCAGTATGCTTGAGTTTGAAGTTCTCA
EW726519       <-- TTGCCATTGATAGATACCCTGGACCAGTATGCTTGAGCTTGAAGTTCTCA
FD958262       <-- TTGCCATTGATAGATATCCTGGACCAGTATGCTTGAGTTTGAAGTTCTCA
FD559211       <-- TTGCCATTGATAGATACCCTGGACCAGTGTGCTTGAGTTTGAAGTTCTCA
EX772694       <-- TTGCCATTGATAGATACCCTGGACCAGTGTGCTTGAGTTTGAAGTTCTCA
FD955286       <-- TTGCCATTGATAGATACCCTGGACCAGTATGCTTGAGTTTGAAGTTCTCA
EW714830       <-- TTGCCATTGATAGATACCCTGGACCAGTATGCTTGAGTTTGAAGTTCTCA
FD571198       <-- TTGCCATTGATAGATACCCTGGACCAGTATGCTTGAGTTTGAAGTTCTCA
FD577523       <-- TTGCCATTGATAGATACCCTGGACCAGTATGCTTGAGTTTGAAGTTCTCA
EX902197       <-- TTGCCATTGATAGATACCCTGGACCAGTATGCTTGAGTTTGAAGTTCTCA
EV546118       --> TTGCCATTGATAGATACCCTGGACCAGTATGCTTGAGTTTGAAGTTCTCA
EX906520       --> TTGCCATTGATAGATACCCTGGACCAGTATGCTTGAGTTTGAAGTTCTCA
FD581813       --> TTGCCATTGATAGATACCCTGGACCAGTATGCTTGAGTTTGAAGTTCTCA
FD554954       --> TTGCCATTGATAGATACCCTGGACCAGTgtg...................
FD582503       --> TTGCCATTGATAGATACCCTGGACCAGTATGCTTGAGTTTGAAGTTCTCA
EW730667       --> TTGCCATTGATAGATACCCTGGACCAGTATGCTTGAGCTTGAAGTTCTCA
FD953782       --> TTGCCATTGATAGATATCCTGGACCAGTATGCTTGAGTTTGAAGTTCTCA
EX776584       --> TTGCCATTGATAGATACCCTGGACCAGTGTGCTTGAGTTTGAAGTTCTCA
FD575065       --> TTGCCATTGATAAATACCCTGGACCAGTATGCTTGAGTTTGAAGTTCTCA
FD951361       --> TTGCCATTGATAGATACCCTGGACCAGTATGCTTGAGTTTGAAGTTCTCA
EW718976       --> TTGCCATTGATAGATACCCTGGACCAGTATGCTTGAGTTTGAAGTTCTCA
FD546985       --> TTGCCATTGATAAATACCCTGGACCAGTATGCTTGAGTTTGAAGTTCTCA

               551    -    601
UN14438        --> TCAGCAAACTTCTCACCATAAATAGATTCACCACCCATACCATTACCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550923       <-- TCAGCAAACTTCTCACCATAAATAGATTCACCTCCCATACCATTACCATC
EW724875       <-- TCAGCAAACTTCTCACCATAAATAGATTCACCACCCATACCATTACCATC
FD938390       <-- TCAGCAAACTTCTCACCATAAATAGATTCACCACCCATACCATTACCATC
FD578329       <-- TCAGCAAACTTCTCACCATAAATAGATTCACCACCCATACCATTACCATC
EW726519       <-- TCAGCAAACTTCTCACCATAAATAGATTCACCACCCATACCATTACCATC
FD958262       <-- TCAGCAAACTTCTCACCATAAATAGATTCACCACCCATACCATTACCATC
FD559211       <-- TCAGCAAACTTTTCACCATAAATAGATTCACCACCCATACCATTACCATC
EX772694       <-- TCAGCAAACTTTTCACCATAAATAGATTCACCACCCATACCATTACCATC
FD955286       <-- TCAGCAAACTCCTCACCATAAATAGATTCACCACCCATACCATTACCATC
EW714830       <-- TCAGCAAACTTCTCACCATAAATAGATTCACCACCCATACCATTACCATC
FD571198       <-- TCAGCAAACTTCTCACCATAAATAGATTCACCACCCATACCATTACCATC
FD577523       <-- TCAGCAAACTTCTCACCATAAATAGATTCACCACCCATATCATTACCATC
EX902197       <-- TCAGCAAACTTCTCACCATAAATAGATTCACCACCCATACCATTACCATC
EV546118       --> TCAGCAAACTTCTCACCATAAATAGATTCACCTCCCATACCATTACCATC
EX906520       --> TCAGCAAACTTCTCACCATAAATAGATTCACCACCCATACCATTACCATC
FD581813       --> TCAGCAAACTTCTCACCATAAATAGATTCACCACCCATATCATTACCATC
FD554954       --> ..................................................
FD582503       --> TCAGCAAACTTCTCACCATAAATAGATTCACCACCCATACCATTACCATC
EW730667       --> TCAGCAAACTTCTCACCATAAATAGATTCACCACCCATACCATTACCATC
FD953782       --> TCAGCAAACTTCTCACCATAAATAGATTCACCACCCATACCATTACCATC
EX776584       --> TCAGCAAACTTTTCACCATAAATAGATTCACCACCCATACCATTACCATC
FD575065       --> TCAGCAAACTTCTCACCATAAATAGATTCACCACCCATACCATTACCATC
FD951361       --> TCAGCAAACTCCTCACCATAAATAGATTCACCACCCATACCATTACCATC
EW718976       --> TCAGCAAACTTCTCACCATAAATAGATTCACCACCCATACCATTACCATC
FD546985       --> TCACCAAACTTCCCACCATAAATAAATTCCCCACCCGTACCATTACCATC

               601    -    651
UN14438        --> AGTAAAGTCGCCTCCCTGGAGCATAAAGCTTGGTATGATCCTATGGAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550923       <-- AGTGAAGTCGCCTCCCTGGAGCATAAAGCTTGGTATGATCCTATGGAAGG
EW724875       <-- AGTAAAGTCGCCTCCCTGG...............................
FD938390       <-- AGTAAAGTCGCCTCCCTGGAGCATAAAGCTTGGTATGATCCTATGGAAGG
FD578329       <-- AGTAAAGTCGCCCCCCTGGAGCATAAAGCTTGGTATGATCCTATGGAAGG
EW726519       <-- AGTAAAGTCGCCTCCCTGGAGCATAAAGCTTGGTATGATCCTATGGAAGG
FD958262       <-- AGTAAAGTCGCCCCCCTGGAGCATAAAGCTTGGTATGATCCTATGGAAGG
FD559211       <-- AGTAAAGTCACCTCCCTGGAGCATAAAGCTTGGTATGATCCTATGGAAGG
EX772694       <-- AGTAAAGTCACCTCCCTGGAGCATAAAGCTTGGTATGATCCTATGGAAGG
FD955286       <-- AGTAAAGTCGCCCCCCTGGAGCATAAAGCTTGGTATGATCCTATGGAAGG
EW714830       <-- AGTAAAGTCGCCTCCCTGGAGCATAAAGCTTGGTATGATCCTATGGAAGG
FD571198       <-- AGTAAAGTCGCCTCCCTGGAGCATAAAGCTTGGTATGATCCTATGGAAGG
FD577523       <-- AGTAAAGTCGCCTCCCTGGAGCATAAAGCTTGGTATGATCCTATGGAAGG
EX902197       <-- AGTAAAGTCGCCTCCCTGGAGCATAAAGCTTGGTATGATCCTATGGAAGG
EV546118       --> AGTGAAGTCGCCTCCCTGGAGCATAAAGCTTGGTATGATCCTATGGAAGG
EX906520       --> AGTAAAGTCGCCTCCCTGGAGCATAAAGCTTGGTATGATCCTATGGAAGG
FD581813       --> AGTAAAGTCGCCTCCCTGGAGCATAAAGCTTGGTATGATCCTATGGAAGG
FD554954       --> ..................................................
FD582503       --> AGTAAAGTCGCCCCCCTGGAGCATAAAGCTTGGTATGATCCTATGGAAGG
EW730667       --> AGTAAAGTCGCCTCCCTGGAGCATAAAGCTTGGTATGATCCTATGGAAGG
FD953782       --> AGTAAAGTCGCCCCCCTGGAGCATAAAGCTTGGTATGATCCTATGGAAGG
EX776584       --> AGTAAAGTCACCTCCCTGGAGCATAAAGCTTGGTATGATCCTATGGAAGG
FD575065       --> AGTAAAGTCCCCTCCCTGGAGCATAAAGCTTGGTATGATCCTATGGAAGG
FD951361       --> AGTAAAGTCGCCCCCCTGGAGCATAAAGCTTGGTATGATCCTATGGAAGG
EW718976       --> AGTAAAGTCGCCTCCCTGGAGCATAAAGCTTGGTATGATCCTATGGAAGG
FD546985       --> AGTAAAGTCCCCTCCCTGGAGCATAAAGCTTGGTATGATCCTATGGAAGG

               651    -    701
UN14438        --> AACTCCCCTTGTAATGCAGAGCCTTCCCTTTCTTACCTACTCCTTTCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550923       <-- AACTCCCCc.........................................
EW724875       <-- ..................................................
FD938390       <-- AACTCCCCTTGTAATGCAGAGCCTTCCCTTTCTTACCTACTCCTTTCTCC
FD578329       <-- AACTCCCCTTGTAATGCAGAGCCTTCCCTTTCTTACCTACTCCTTTCTCC
EW726519       <-- AACTCCCCTTGTAATGCAGAGCCTTCCCTTTCTTACCTACTCCTTTCTCC
FD958262       <-- AACTCCCCTTGTAATGCAGAGCCTTCCCTTTCTTACCTACTCCTTTCTCC
FD559211       <-- AACTCCCCTTGTAATGTAGAGCCTTCCCTTTCTTTCCCATTCCTTTCTCC
EX772694       <-- AACTCCCCTTGTAA....................................
FD955286       <-- AACTCCCCTTGTAATGCAGAGCCTTCCCTTTCTTACCTACTCCTTTCTCC
EW714830       <-- AACTCCCCTTGTAATGCAGAGCCTTCCCTTTCTTACCTACTCCTTTCTCC
FD571198       <-- AACTCCCCTTGTAATGCAGAGCCTTCCCTTTCTTACCTACTCCTTTCTCC
FD577523       <-- AACTCCCCTTGTAATGCAGAGCCTTCCCTTTCTTACCTACTCCTTTCTCC
EX902197       <-- AACTCCCCTTGTAATGCAGAGCCTTCCCTTTCTTACCTACTTCTTTCTCC
EV546118       --> AACTCCCCc.........................................
EX906520       --> AACTCCCCTTGTAATGCAGAGCCTTCCCTTTCTTACCTACTTCTTTCTCC
FD581813       --> AACTCCCCTTGTAATGCAGAGCCTTCCCTTTCTTACCTACTCCTTTCTCC
FD554954       --> ..................................................
FD582503       --> AACTCCCCTTGTAATGCAGAGCCTTCCCTTTCTTACCTACTCCTTTCTCC
EW730667       --> AACTCCCCTTGTAATGCAGAGCCTTCCCTTTCTTACCTACTCCTTTCTCC
FD953782       --> AACTCCCCTTGTAATGCAGAGCCTTCCCTTTCTTACCTACTCCTTTCTCC
EX776584       --> AACTCCCCTTGTAATGTAGAGCCTTCCCTTTCTTTCCCATTCCTTTCTCC
FD575065       --> AACTCCCCTTGTAATGCAAAGCCTTCCCTTTCTTACCTACTCCTTTCTCC
FD951361       --> AACTCCCCTTGTAATGCAGAGCCTTCCCTTTCTTACCTACTCCTTTCTCC
EW718976       --> AACTCCCCTTGTAATGCAGAGCCTTCCCTTTCTTACCTACTCCTTTCTCC
FD546985       --> AACTCCCCTTGTAATGCAAAGCCTTCCCTTTCTTACCTACTCCTTTCTCC

               701    -    751
UN14438        --> CCTGTGCACAAAGCTCGGAAATTCTCTGCAGTTTTAGGGACTGTCTTGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550923       <-- ..................................................
EW724875       <-- ..................................................
FD938390       <-- CCTGTGCACAAAGCTCGGAAATTCTCTGCAGTTTTAGGGACTGTCTTGCC
FD578329       <-- CCTGTGCACAAAGCTCGGAAATTCTCTGCAGTTTTAGGGACTGTCTTGCC
EW726519       <-- TCTGTGCACAAAGCTCGGAAATTCTCTGCAGTTTTAGGGACTGTCTTGCC
FD958262       <-- CCTGTGCACAAAGCTCGGAAATTCTCTGCAGTTTTAGGGACTGTCTTGCC
FD559211       <-- CCTGTGCACAAAGCTCGGAAATTCTCTGCAGTTTTAGGGACTGTCTTGCC
EX772694       <-- ..................................................
FD955286       <-- CCTGTGCACAAAGCTCGGAAATTCTCTGCAGTTTTAGGGACTGTCTTGCC
EW714830       <-- CCTGTGCACAAAGCTCGGAAATTCTCTGCAGTTTTAGGGACTGTCTTGCC
FD571198       <-- CCTGTGCACAAAGCTCGGAAATTCTCTGCAGTTTTAGGGACTGTCTTGCC
FD577523       <-- CCTGTGCACAAAGCTCGGAAATTCTCTGCAGTTTTAGGGACGGTCTTGCC
EX902197       <-- CCTGTGCACAAAGCTCGGAAATTCTCTGCAGTTTTAGGGACTGTCTTGCC
EV546118       --> ..................................................
EX906520       --> CCTGTGCACAAAGCTCGG................................
FD581813       --> CCTGTGCACAAAGCTCGGAAATTCTCTGCAGTTTTAGGGACGGTCTTGCC
FD554954       --> ..................................................
FD582503       --> CCTGTGCACAAAGCTCGGAAATTCTCTGCAGTTTTAGGGACTGTCTTGCC
EW730667       --> TCTGTGCACAAAGCTCGGAAATTCTCTGCAGTTTTAGGGACTGTCTTGCC
FD953782       --> CCTGTGCACAAAGCTCGGAAATTCTCTGCAGTTTTAGGGACTGTCTTGCC
EX776584       --> CCTGTGCACAAAGCTCGGAAATTCTCTGCAGTTTTAGGGACTGTCTTGCC
FD575065       --> CCTGTGCACAAAGCTCGGAAATTCTCTGCAGTTTTAGGGACTGTCTTGCC
FD951361       --> CCTGTGCACAAAGCTCGGAAATTCTCTGCAGTTTTAGGGACTGTCTTGCC
EW718976       --> CCTGTGCACAAAGCTCGGAAATTCTCTGCAGTTTTAGGGACTGTCTTGCC
FD546985       --> C.................................................

               751    -    801
UN14438        --> AAATAGACCCATGACAATACGACCGGCTTCTTTGCCATTAATTTCGACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550923       <-- ..................................................
EW724875       <-- ..................................................
FD938390       <-- AAATAGACCCATGACAATACGACCGGCTTCTTTGCCATTAATTTCGACAT
FD578329       <-- AAATAGACCCATGACAATACGACCGGCTTCTTTGCCATTAATTTCGACAT
EW726519       <-- AAATAGACCCATGACAATACGACCGGCTTCTTTGCCATTAATTTCGACAT
FD958262       <-- AAATAGACCCATGACAATACGACCGGCTTCTTTGCCATTAATTTCGACAT
FD559211       <-- AAATAGACCCATGACAATACGACCGGCTTCTTTGCCATTAATTTCGACAT
EX772694       <-- ..................................................
FD955286       <-- AAATAGACCCATGACAATACGACCGGCTTCTTTGCCATTAATTTCGACAT
EW714830       <-- AAATAGACCCATGACAATACGACCGGCTTCTTTGCCATTAATTTCGACAT
FD571198       <-- AAATAGACCCATGACAATACGACCGGCCTCTTTGCCATTAATTTCGACAT
FD577523       <-- AAATAGACCCATGACAATACGACCGGCTTCTTTGCCATTAATTTCGACAT
EX902197       <-- AAATAGACCCATGACAATACGACCGGCTTCTTTGCCATTAATTTCGACAT
EV546118       --> ..................................................
EX906520       --> ..................................................
FD581813       --> AAATAGACCCATGACAATACGACCGGCTTCTTTGCCATTAATTTCGACAT
FD554954       --> ..................................................
FD582503       --> AAATAGACCCATGACAATACGACCGGCTTCTTTGCCATTAATTTCGACAT
EW730667       --> AAATAGACCCATGACAATACGACCGGCTTCTTTGCCATTAATTTCGACAT
FD953782       --> AAATAGACCCATGACAATACGACCGGCTTCTTTGCCATTAATTTCGACAT
EX776584       --> AAATAGACCCATGACAATACGACCAGCTTCTTTGCCATTAATTTCGACAT
FD575065       --> AA................................................
FD951361       --> AAATAGACCCATGACAATACGACCGGCTTCTTTGCCATTAATTTCGACAT
EW718976       --> AAATAGACCCATGACAATACGACCGGCTTCTTTGCCATTAATTTCGACAT
FD546985       --> ..................................................

               801    -    851
UN14438        --> CGAAATAAACCTTGTGTGTGATCTTTTCCTTCTTTTTGGCCTGAATAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550923       <-- ..................................................
EW724875       <-- ..................................................
FD938390       <-- CGAAATAAACCTTGTGTGTGATCTTTTCCTTCTTTTTGGCCTGAATAGAG
FD578329       <-- CGAAATAAACCTTGTGTGTGATCTTTTCCTTCTTTTTGGCCTGAATAGAG
EW726519       <-- CGAAATAAACCTTGTGTGTGATCTTTTCCTTCTTTTTGGGCTGAATAGAG
FD958262       <-- CGAAATAAACCTTGTGTGTGATCTTTTCCTTCTTTTTGGCCTGAATAGAG
FD559211       <-- CGAAATAAACCTTGTGTGTGATCTTTTCCTTCTTTTTGGCCTGAATAGAG
EX772694       <-- ..................................................
FD955286       <-- CGAAATAAACCTTGTGTGTGATCTTTTCCTTCTTTTTGGCCTGAATAGAG
EW714830       <-- CGAAATAAACCTTGTGTGTGATCTTTTCCTTCTTTTTGGCCTGAATAGAG
FD571198       <-- CGAAATAAACCTTGTGTGTGATCCTTTCCTTCTTTTTGGCCTGAATAGAG
FD577523       <-- CGAAATAAACCTTGTGTGTGATCTTTTCCTTCTTTTTGGCCTGAATAGAG
EX902197       <-- CGAAATAAACCTTGTGTGTGATCTTTTCCTTCTTTTTGGCCTGAATAGAG
EV546118       --> ..................................................
EX906520       --> ..................................................
FD581813       --> CGAAATAAACCTTGTGTGTGATCTTTTC......................
FD554954       --> ..................................................
FD582503       --> CGAAATAAACCTTGTGTGTGATCTTTTCCTTCTTTTTGGCCTGAATAGAG
EW730667       --> CGAAATAAACCTTGTGTGTGATCTTTTCCTTCTTTTTGGGCTGAATAGAG
FD953782       --> CGAAATAAACCTTGTGTGTGATCTTTTCCTTCTTTTTGGCCTGAATAGAG
EX776584       --> CGAAATAAACCTTGTGTGTGATCTTTTCCTTCTTTTTGGCCTGAATAGAG
FD575065       --> ..................................................
FD951361       --> CGAAATAAACCTTGTGTGTGATCTTTTCCTTCTTTTTGGCCTGAATA...
EW718976       --> CGAAATAAACCTTGTGTGTGATCTTTTCCTTCTTTTTGGCCTGAATAGAG
FD546985       --> ..................................................

               851    -    901
UN14438        --> ATTAGGGTTCCCAGAAGAAGAAGACTCCACAGAAGCAGTTTCACTGACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550923       <-- ..................................................
EW724875       <-- ..................................................
FD938390       <-- ATTAGGGTTCCCAGAAGAAGAAGACTCCATAGAAGCAGTTTCACTGACCT
FD578329       <-- ATTAGGCTTCCCAGAAGAAGAAGACTCCACAGAAGCAGTTTCACTGACCT
EW726519       <-- ATTAGGGTTCCCAGAAGAAGAAGACTCCATAGAAGCAGTTTCACTGACCT
FD958262       <-- ATTAGGCTTCCCAGAAGAAGAAGACTCCACAGAAGCAGTTTCACTGACCT
FD559211       <-- ATTAGGGTTCCCAGAAGAAGAAGACTCCATAGAAGCAGCTTCACTGACCT
EX772694       <-- ..................................................
FD955286       <-- ATTAGGCTTCCCAGAAGAAGAAGACTCCACAGAAGCAGTTTCACTGACCT
EW714830       <-- ATTAGGGTTCCCAGAAGAAGAAGACTCCATAGAAGCAGTTTCACTGACCT
FD571198       <-- ATTAGGGTTCCCAGAAGAAGAAGACTCCACAGAAGCAGCTTCACTGACCT
FD577523       <-- ATTAGGCTTCCCAGAAGAAGAAGACTCCACAGAAGCAGTTTCACTGACCT
EX902197       <-- ATTAGGCTTCCCAGAAGAAGAAGACTCCACAGAAGCAGTTTCACTGACCT
EV546118       --> ..................................................
EX906520       --> ..................................................
FD581813       --> ..................................................
FD554954       --> ..................................................
FD582503       --> ATTAGGCTTCCCAGAAGAAGAAGACTCCACAGAAGCAGTTTCACTGACCT
EW730667       --> ATTAGGGTTCCCAGAAGAAGAAGACTCCATAGAAGCAGTTTCACTGACCT
FD953782       --> ATTAGGCTTCCCAGAAGAAGAAGACTCCACAGAAGCAGTTTCACTGACCT
EX776584       --> ATTAGGGTTCCCAGAAGAAGAAGACTCCATAGAAGCAGCTTCACTGACCT
FD575065       --> ..................................................
FD951361       --> ..................................................
EW718976       --> ATTAGGGTTCCCAGAAGAAGAAGACTCCATAGAAGCAGTTTCACTGACCT
FD546985       --> ..................................................

               901    -    951
UN14438        --> CGCCATCTCTGATCTCTCTCTCTCGCACCCTCAAACTGTTTCTCTCTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550923       <-- ..................................................
EW724875       <-- ..................................................
FD938390       <-- CGCCATCTCTGATCTCTCTCTCTCGCACTCTCAAACTGTTTCTCTCcc..
FD578329       <-- CGCCATCTCTGATCTCTCT...............................
EW726519       <-- CGCCATCTCTGATCTCTCTCTCTCGCACCCTCAAACTGTTTCTCTCTCTc
FD958262       <-- CGCCATCTCTGATCTCT----CTCGCACCCTCCAACTGTTTCTCcc....
FD559211       <-- CGCCATCTCTGATCTCTCTCTCTCtctcaaactgtttctcc.........
EX772694       <-- ..................................................
FD955286       <-- CGCCATCTCTGATCTCc.................................
EW714830       <-- CGCCATCTCTGATCTCTCTCTCTCGCACCCTCAAACTGTTTCTCTCTATT
FD571198       <-- CGCCATCTCCGATCTCTCTCTCTCGCACCCTCAAACTGTTTCTCTCcc..
FD577523       <-- CGCCATCTCTGATCTCT----CTCGCACCCTCCAACTGTTTCTCTCTCc.
EX902197       <-- CGCCATCTCTGATCTCTCTCg.............................
EV546118       --> ..................................................
EX906520       --> ..................................................
FD581813       --> ..................................................
FD554954       --> ..................................................
FD582503       --> CGCCATCTCTGATCTCTCTC----GCACCCTCCAACTGTTTCTCcc....
EW730667       --> CGCCATCTCTGATCTCTCTCTCTCGCACCCTCAAACTGTTTCTCTCTCTc
FD953782       --> CGCCATCTCTGATCTCTCTC----GCACCCTCCAACTGTTTCTCcc....
EX776584       --> CGCCATCTCTGATCTCTCTCTCTCGCACCCTCAAACTGTTTCTCTCTCTc
FD575065       --> ..................................................
FD951361       --> ..................................................
EW718976       --> CGCCATCTCTGATCTCTCTCTCTCGCACCCTCAAACTGTTTCTCTCTATT
FD546985       --> ..................................................

               951    -   1001
UN14438        --> TTTCTGTCAGCCTTTTTTGCATTTTTATTTCCACTTGTGCCATAACAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV550923       <-- ..................................................
EW724875       <-- ..................................................
FD938390       <-- ..................................................
FD578329       <-- ..................................................
EW726519       <-- c.................................................
FD958262       <-- ..................................................
FD559211       <-- ..................................................
EX772694       <-- ..................................................
FD955286       <-- ..................................................
EW714830       <-- TTTCTGTCAGCCTTTTTTGCATTTTTATTTCCACTTGTGCCATAACAAAG
FD571198       <-- ..................................................
FD577523       <-- ..................................................
EX902197       <-- ..................................................
EV546118       --> ..................................................
EX906520       --> ..................................................
FD581813       --> ..................................................
FD554954       --> ..................................................
FD582503       --> ..................................................
EW730667       --> c.................................................
FD953782       --> ..................................................
EX776584       --> cc................................................
FD575065       --> ..................................................
FD951361       --> ..................................................
EW718976       --> TTTCTGTCAGCCTTTTTTGCATTTTTATTTCCACTTGTGCCATAACAAAG
FD546985       --> ..................................................

               1001   -   1051
UN14438        --> AACCCC
                   ~~~~~~
EV550923       <-- ......
EW724875       <-- ......
FD938390       <-- ......
FD578329       <-- ......
EW726519       <-- ......
FD958262       <-- ......
FD559211       <-- ......
EX772694       <-- ......
FD955286       <-- ......
EW714830       <-- AACCCC
FD571198       <-- ......
FD577523       <-- ......
EX902197       <-- ......
EV546118       --> ......
EX906520       --> ......
FD581813       --> ......
FD554954       --> ......
FD582503       --> ......
EW730667       --> ......
FD953782       --> ......
EX776584       --> ......
FD575065       --> ......
FD951361       --> ......
EW718976       --> AACCCC
FD546985       --> ......