1      -     51
UN14451        --> AAGATAATTGGCTGAAAAAGGAACATTTAATATTGGCAGAAACAAAAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW735397       <-- AAGATAATTGGCTGAAAAAGGAACATTTAATATTG-CAGAAACAAAAGTA
EY899240       <-- .........GGCTGAAAAAGGAACATTTAATATTGGCAGAAACAAAAGTA
EY938580       <-- .........GGCTGAAAAAGGAACATTTAATATTGGCAGAAACAAAAGTA
FY438091       <-- .........GGCTGAAAAAGGAACATTTAATATTGGCAGAAACAAAAGTA
FD576446       <-- .............GAAAAAGGAACATTTAATATTGGCAGAAACAAAAGTA
EY930650       <-- ...............AAAAGGAACATTTAATATTGGCAGAAACAAAAGTA
FD535589       <-- .............ggAAAAGGAACATTTAATATTGGCAGAGACAAAAGTA
EY931652       <-- ................AAAGGAACATTTAATATTGGCAGAAACAAAAGTA
EX762425       <-- ...............gtAAGGAACATTTAATATTGGCAGAAACAAAAGTA
EY905514       <-- ..................................................
FD543731       <-- ..................................................
EX764977       <-- ..................................................
FD957363       <-- ..................................................
FD989012       <-- ..................................................
FD940245       <-- ..................................................
EY895064       --> .........GGCTGAAAAAGGAACATTTAATATTGGCAGAAACAAAAGTA
EY934679       --> .........GGCTGAAAAAGGAACATTTAATATTGGCAGAAACAAAAGTA
FD942785       --> .........GGCTGAAAAAGGAACATTTAATATTGGCAGAAACAAAAGTA
FD580941       --> .............GAAAAAGGAACATTTAATATTGGCAGAAACAAAAGTA
FD531221       --> .............ggAAAAGGAACATTTAATATTGGCAGAGACAAAAGTA
FD936174       --> ..............................TATTGGCAGAAACAAAAGTA
EY941959       --> ..................................GGCAGAAACAAAAGTA
EY901933       --> ..................................................
EX766680       --> ..................................................
EX768795       --> ..................................................
FD953078       --> ..................................................
EW739495       --> ..................................................
FD984849       --> ..................................................

               51     -    101
UN14451        --> TCAATAACAAAACTCATGCTGTTTAAAATCATCTTTCAGTACTTAAGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW735397       <-- TCAATAACAAAACTCATGCTGCTTAAAATCATCTTTCAGTACTTAAGGTC
EY899240       <-- TCAATAACAAAACTCATGCTGTTTAAAATCATCTTTCAGTACTTAAGGTC
EY938580       <-- TCAATAACAAAACTCATGCTGTTTAAAATCATCTTTCAGTACTTAAGGTC
FY438091       <-- TCAATAACAAAACTCATGCTGTTTAAAATCATCTTTCAGTACTTAAGGTC
FD576446       <-- TCAATAACAAAACTCATGCTGTTTAAAATCATCTTTCAGTACTTAAGGTC
EY930650       <-- TCAATAACAAAACTCATGCTGTTTAAAATCATCTTTCAGTACTTAAGGTC
FD535589       <-- TCAATAACAAAACTCATGCTGTTTAAAATCATCTTTCAGTACTTAAGGTC
EY931652       <-- TCAATAACAAAACTCATGCTGTTTAAAATCATCTTTCAGTACTTAAGGTC
EX762425       <-- TCAATAACAAAACTCATGCTGTTTAAAATCATCTTTCAGTACTTAAGGTC
EY905514       <-- .....AACAAAACTCATGGTGTTTAAAATCATCTT-CAGTATTTAAG-TC
FD543731       <-- .....AACAAAACTCATGGTGTTTAAAATCATCTT-CAGTATTTAAG-TC
EX764977       <-- .................GCTGTTTAAAATCATCTTTCAGTACTTAAGGTC
FD957363       <-- ........................AAAATCATCTTTCAGTACTTAAGGTC
FD989012       <-- ........................AAAATCATCTTTCAGTACTTAAGGTC
FD940245       <-- ..................................................
EY895064       --> TCAATAACAAAACTCATGCTGTTTAAAATCATCTTTCAGTACTTAAGGTC
EY934679       --> TCAATAACAAAACTCATGCTGTTTAAAATCATCTTTCAGTACTTAAGGTC
FD942785       --> TCAATAACAAAACTCATGCTGTTTAAAATCATCTTTCAGTACTTAAGGTC
FD580941       --> TCAATAACAAAACTCATGCTGTTTAAAATCATCTTTCAGTACTTAAGGTC
FD531221       --> TCAATAACAAAACTCATGCTGTTTAAAATCATCTTTCAGTACTTAAGGTC
FD936174       --> TCAATAACAAAACTCATGCTGTTTAAAATCATCTTTCAGTACTTAAGGTC
EY941959       --> TCAATAACAAAACTCATGCTGTTTAAAATCATCTTTCAGTACTTAAGGTC
EY901933       --> .....AACAAAACTCATGGTGTTTAAAATCATCTT-CAGTATTTAAG-TC
EX766680       --> ........AAAACTCATGCTGTTTAAAATCATCTTTCAGTACTTAAGGTC
EX768795       --> .................GCTGTTTAAAATCATCTTTCAGTACTTAAGGTC
FD953078       --> ........................AAAATCATCTTTCAGTACTTAAGGTC
EW739495       --> ..................................................
FD984849       --> ..................................................

               101    -    151
UN14451        --> GCTACAAAACATATGGAAGGAAAGCTCAAAAACATAAGGGGAAGAAAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW735397       <-- GCTACAAAACATATGGAAGGAAAGCTCAAAAACATAAGGGGAAGAAAGTA
EY899240       <-- GCTACAAAACATATGGAAGGAAAGCTCAAAAACATAAGGGGAAGAAAGTA
EY938580       <-- GCTACAAAACATATGGAAGGAAAGCTCAAAAACATAAGGGGAAGAAAGTA
FY438091       <-- GCTACAAAACATATGGAAGGAAAGCTCAAAAACATAAGGGGAAGAAAGTA
FD576446       <-- GCTACAAAACATATGGAAGGAAAGCTCAAAAACATAAGGGGAAGAAAGTA
EY930650       <-- GCTACAAAACATATGGAAGGAAAGCTCAAAAACATAAGGGGAAGAAAGTA
FD535589       <-- GCTACAAAACATATGGAAGGAAAGCTCAAAAACATAAGGGGAAGAAAGTA
EY931652       <-- GCTACAAAACATATGGAAGGAAAGCTCAAAAACATAAGGGGAAGAAAGTA
EX762425       <-- GCTACAAAACATATGGAAGGAAAGCTCAAAAACATAAGGGGAAGAAAGTA
EY905514       <-- GCTACAAAACATATG-AAGGAAAGCCCAAAAACACAAGGGGAAGAAAGTA
FD543731       <-- GCTACAAAACATATG-AAGGAAAGCCCAAAAACACAAGGGGAAGAAAGTA
EX764977       <-- GCTACAAAACATATGGAAGGAAAGCTCAAAAACATAAGGGGAAGAAAGTA
FD957363       <-- GCTACAAAACATATGGAAGGAAAGCTCAAAAACATAAGGGGAAGAAAGTA
FD989012       <-- GCTACAAAACATATGGAAGGAAAGCTCAAAAACATAAAGGGAAGAAAGTA
FD940245       <-- ..................................................
EY895064       --> GCTACAAAACATATGGAAGGAAAGCTCAAAAACATAAGGGGAAGAAAGTA
EY934679       --> GCTACAAAACATATGGAAGGAAAGCTCAAAAACATAAGGGGAAGAAAGTA
FD942785       --> GCTACAAAACATATGGAAGGAAAGCTCAAAAACATAAGGGGAAGAAAGTA
FD580941       --> GCTACAAAACATATGGAAGGAAAGCTCAAAAACATAAGGGGAAGAAAGTA
FD531221       --> GCTACAAAACATATGGAAGGAAAGCTCAAAAACATAAGGGGAAGAAAGTA
FD936174       --> GCTACAAAACATATGGAAGGAAAGCTCAAAAACATAAGGGGAAGAAAGTA
EY941959       --> GCTACAAAACATATGGAAGGAAAGCTCAAAAACATAAGGGGAAGAAAGTA
EY901933       --> GCTACAAAACATATG-AAGGAAAGCCCAAAAACACAAGGGGAAGAAAGTA
EX766680       --> GCTACAAAACATATGGAAGGAAAGCTCAAAAACATAAGGGGAAGAAAGTA
EX768795       --> GCTACAAAACATATGGAAGGAAAGCTCAAAAACATAAGGGGAAGAAAGTA
FD953078       --> GCTACAAAACATATGGAAGGAAAGCTCAAAAACATAAGGGGAAGAAAGTA
EW739495       --> ..................................................
FD984849       --> ..................................................

               151    -    201
UN14451        --> GAACTAATAGCCTCCCTTGAGATCGTTGACGACATCGTAGGGGATAGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW735397       <-- GAACTAATAGCCTCCCTTGAGATCGTTGACGACGTCGTAGGGGATAGGAG  Raphanus sativus cv Rat-Tail Radish #3870
EY899240       <-- GAACTAATAGCCTCCCTTGAGATCGTTCACGACGTCGTAGGGGATAGGAG  Raphanus raphanistrum subsp. maritimus
EY938580       <-- GAACTAATAGCCTCCCTTGAGATCGTTGACGACGTCGTAGGGGATAGGAG  Raphanus sativus cv Early Scarlet Globe
FY438091       <-- GAACTAATAGCCTCCCTTGAGATCGTTGACGACGTCGTAGGGGATAGGAG  Raphanus sativus cv GSK3-1
FD576446       <-- GAACTAATAGCCTCCCTTGAGATCGTTGACGACATCGTAGGGGATAGGAG  Raphanus sativus cv Rat-Tail Radish #3870
EY930650       <-- GAACTAATAGCCTCCCTTGAGATCGTTGACGACATCGTAGGGGATAGGAG  Raphanus sativus var. oleiformis
FD535589       <-- GAACTAATAGCCTCCCTTGAGATCGTTGACGACATCGTAGGGGATAGGAG  Raphanus raphanistrum subsp. maritimus
EY931652       <-- GAACTAATAGCCTCCCTTGAGATCGTTGACGACATCGTAGGGGATAGGAG  Raphanus sativus var. oleiformis
EX762425       <-- GAACTAATAGCCTCCCTTGAGATCGTTGACGACGTCGTAGGGGATAGGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY905514       <-- GAACTAATAGCCTCCCTTGAGATCGTTGACGACATCGCAGGGGATAGGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543731       <-- GAACTAATAGCCACCCTTGAGATCGTTGACGACATCGTAGGGGATAGGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX764977       <-- GAACTAATAGCCTCCCTTGAGATCGTTGACGACGTCGTAGGGGATAGGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD957363       <-- GAATTAATAGCCTCCCTTGAGATCGTTGACGACATCGTAGGGGATAGGAG  Raphanus sativus cv Rat-Tail Radish #3870
FD989012       <-- GAACTAATAGCTTCCCTTGAGATCGTTGACGACATCGTAGGGGATAGGAG  Raphanus raphanistrum subsp. landra
FD940245       <-- ..................................................  Raphanus sativus var. oleiformis
EY895064       --> GAACTAATAGCCTCCCTTGAGATCGTTCACGACGTCGTAGGGGATAGGAG  Raphanus raphanistrum subsp. maritimus
EY934679       --> GAACTAATAGCCTCCCTTGAGATCGTTGACGACGTCGTAGGGGATAGGAG  Raphanus sativus cv Early Scarlet Globe
FD942785       --> GAACTAATAGCCTCCCTTGAGATCGTTGACGACGTCGTAGGGGATAGGAG  Raphanus sativus cv Early Scarlet Globe
FD580941       --> GAACTAATAGCCTCCCTTGAGATCGTTGACGACATCGTAGGGGATAGGAG  Raphanus sativus cv Rat-Tail Radish #3870
FD531221       --> GAACTAATAGCCTCCCTTGAGATCGTTGACGACATCGTAGGGGATAGGAG  Raphanus raphanistrum subsp. maritimus
FD936174       --> GAACTAATAGCCTCCCTTGAGATCGTTGACGACGTCGTAGGGGATAGGAG  Raphanus sativus var. oleiformis
EY941959       --> GAACTAATAGCCTCCCTTGAGATCGTTGACGACATCGTAGGGGATAGGAG  Raphanus sativus cv Rat-Tail Radish #3870
EY901933       --> GAACTAATAGCCTCCCTTGAGATCGTTGACGACATCGCAGGGGATAGGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766680       --> GAACTAATAGCCTCCCTTGAGATCGTTGACGACGTCGTAGGGGATAGGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768795       --> GAACTAATAGCCTCCCTTGAGATCGTTGACGACGTCGTAGGGGATAGGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD953078       --> GAATTAATAGCCTCCCTTGAGATCGTTGACGACATCGTAGGGGATAGGAG  Raphanus sativus cv Rat-Tail Radish #3870
EW739495       --> ...................................ccTAGGGGATAGGAG  Raphanus sativus cv Rat-Tail Radish #3870
FD984849       --> ................................................AG  Raphanus raphanistrum subsp. landra

               201    -    251
UN14451        --> TGACAGTCTCCAAGGTCATACCCTCAACCATGAATCCTGGCTTGGGGCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW735397       <-- TGACAGTCTCCAAGGTCATACCCTCAACCATGAATCCTGGCTTGGGGCCT  Raphanus sativus cv Rat-Tail Radish #3870
EY899240       <-- TGACAGTCTCCAAGGTCATACCCTCAACCATGAATCCTGGCTTGGGGCCT  Raphanus raphanistrum subsp. maritimus
EY938580       <-- TGACAGTCTCCAAGGTCATACCCTCAACCATGAATCCTGGCTTGGGGCCT  Raphanus sativus cv Early Scarlet Globe
FY438091       <-- TGACAGTCTCCAAGGTCATACCCTCAACCATGAATCCTGGCTTGGGGCCT  Raphanus sativus cv GSK3-1
FD576446       <-- TAACAGTCTCCAAGGTCATACCCTCAACCATGAATCCTGGCTTGGGGCCT  Raphanus sativus cv Rat-Tail Radish #3870
EY930650       <-- TAACAGTCTCCAAGGTCATACCCTCAACCATGAATCCTGGCTTGGGGCCT  Raphanus sativus var. oleiformis
FD535589       <-- TAACAGTCTCCAAGGGCATACCCTCAACCATGAATCCTGGCTTGGGGCCT  Raphanus raphanistrum subsp. maritimus
EY931652       <-- TAACAGTCTCCAAGGTCATACCCTCAACCATGAATCCTGGCTTGGGGCCT  Raphanus sativus var. oleiformis
EX762425       <-- TGACAGTCTCCAAGGTCATACCCTCAACCATGAATCCTGGCTTGGGGCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY905514       <-- TGACAGTCTCCAAGGTCATACCCTCAACCATGAATCCTGGCTTGGGGCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543731       <-- TGACAGTCTCCAAGGTCATACCCTCAACCATGAATCCTGGCTTGGGGCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX764977       <-- TGACAGTCTCCAAGGTCATACCCTCAACCATGAATCCTGGCTTGGGGCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD957363       <-- TAACAGTCTCCAAGGTCATACCCTCAACCATGAATCCTGGCTTGGGGCCT  Raphanus sativus cv Rat-Tail Radish #3870
FD989012       <-- TAACAGTCTCCAAGGTCATACCCTCAACCATGAATCCTGGCTTAGGGCCT  Raphanus raphanistrum subsp. landra
FD940245       <-- ..................................................  Raphanus sativus var. oleiformis
EY895064       --> TGACAGTCTCCAAGGTCATACCCTCAACCATGAATCCTGGCTTGGGGCCT  Raphanus raphanistrum subsp. maritimus
EY934679       --> TGACAGTCTCCAAGGTCATACCCTCAACCATGAATCCTGGCTTGGGGCCT  Raphanus sativus cv Early Scarlet Globe
FD942785       --> TGACAGTCTCCAAGGTCATACCCTCAACCATGAATCCTGGCTTGGGGCCT  Raphanus sativus cv Early Scarlet Globe
FD580941       --> TAACAGTCTCCAAGGTCATACCCTCAACCATGAATCCTGGCTTGGGGCCT  Raphanus sativus cv Rat-Tail Radish #3870
FD531221       --> TAACAGTCTCCAAGGGCATACCCTCAACCATGAATCCTGGCTTGGGGCCT  Raphanus raphanistrum subsp. maritimus
FD936174       --> TGACAGTCTCCAAGGTCATACCCTCAACCATGAATCCTGGCTTGGGGCCT  Raphanus sativus var. oleiformis
EY941959       --> TAACAGTCTCCAAGGTCATACCCTCAACCATGAATCCTGGCTTGGGGCCT  Raphanus sativus cv Rat-Tail Radish #3870
EY901933       --> TGACAGTCTCCAAGGTCATACCCTCAACCATGAATCCTGGCTTGGGGCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766680       --> TGACAGTCTCCAAGGTCATACCCTCAACCATGAATCCTGGCTTGGGGCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768795       --> TGACAGTCTCCAAGGTCATACCCTCAACCATGAATCCTGGCTTGGGGCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD953078       --> TAACAGTCTCCAAGGTCATACCCTCAACCATGAATCCTGGCTTGGGGCCT  Raphanus sativus cv Rat-Tail Radish #3870
EW739495       --> TGACAGTCTCCAAGGTCATACCCTCAACCATGAATCCTGGCTTGGGGCCT  Raphanus sativus cv Rat-Tail Radish #3870
FD984849       --> TAACAGTCTCCAAGGGCATACCCTCAACCATGAATCCTGGCTTAGGGCCT  Raphanus raphanistrum subsp. landra

               251    -    301
UN14451        --> TTAGGTTGTCTCTTGGTGCTTATTGTCTCGCCTCTGGCTTTGGCTGCGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW735397       <-- TTAGGTTGTCTCTTGGTGCTTATTGTATCGCCTCTGGCTTTGGCTGCGGC  Raphanus sativus cv Rat-Tail Radish #3870
EY899240       <-- TTAGGTTGTCTCTTGGTGCTTATTGTCTCGCCTCTGGCTTTGGCTGCGGC  Raphanus raphanistrum subsp. maritimus
EY938580       <-- TTAGGTTGTCTCTTGGTGCTTATTGTCTCGCCTCTGGCTTTGGCTGCGGC  Raphanus sativus cv Early Scarlet Globe
FY438091       <-- TTAGGTTGTCTCTTGGTGCTTATTGTCTCGACTCTGGCTTTGGCTGCGGC  Raphanus sativus cv GSK3-1
FD576446       <-- TTAGGTTGTCTCTTAGTGCTTATTGTCTCGCCTCTGGCTTTGGCTGCGGC  Raphanus sativus cv Rat-Tail Radish #3870
EY930650       <-- TTAGGTTGTCTCTTGGTGCTTATTGTCTCGCCTCTGGCTTTGGCTGCGGC  Raphanus sativus var. oleiformis
FD535589       <-- TTAGGTTGTCTCTTGGTGCTTATTGTCTCGCCTCTGGCTTTGGCTGCGGC  Raphanus raphanistrum subsp. maritimus
EY931652       <-- TTAGGTTGTCTCTTGGTGCTTATTGTCTCGCCTCTGGCTTTGGCTGCGGC  Raphanus sativus var. oleiformis
EX762425       <-- TTAGGTTGTCTCTTGGTGCTTATTGTATCGCCTCTGGTTTTGGCTGCGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY905514       <-- TTAGGTTGTCTCTTGGTGCTTATTGTCTCGCCTCTGGCTTTGGCTGCAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543731       <-- TTAGGTTGTCTCTTGGTGCTTATTGTCTCGCCTCTGGCTTTGGCTGCGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX764977       <-- TTAGGTTGTCTCTTGGTGCTTATTGTATCGCCTCTGGCTTTGGCTGCGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD957363       <-- TTAGGTTGTCTCTTGGTGCTTATTGTCTCGCCTCTGGCTTTGGCTGCGGC  Raphanus sativus cv Rat-Tail Radish #3870
FD989012       <-- TTAGGTTGTCTCTTGGTGCTTATTGTCTCGCCTCTGGCTTTGGCTGCGGC  Raphanus raphanistrum subsp. landra
FD940245       <-- ..................................................  Raphanus sativus var. oleiformis
EY895064       --> TTAGGTTGTCTCTTGGTGCTTATTGTCTCGCCTCTGGCTTTGGCTGCGGC  Raphanus raphanistrum subsp. maritimus
EY934679       --> TTAGGTTGTCTCTTGGTGCTTATTGTCTCGCCTCTGGCTTTGGCTGCGGC  Raphanus sativus cv Early Scarlet Globe
FD942785       --> TTAGGTTGTCTCTTGGTGCTTATTGTCTCGCCTCTGGCTTTGGCTGCGGC  Raphanus sativus cv Early Scarlet Globe
FD580941       --> TTAGGTTGTCTCTTAGTGCTTATTGTCTCGCCTCTGGCTTTGGCTGCGGC  Raphanus sativus cv Rat-Tail Radish #3870
FD531221       --> TTAGGTTGTCTCTTGGTGCTTATTGTCTCGCCTCTGGCTTTGGCTGCGGC  Raphanus raphanistrum subsp. maritimus
FD936174       --> TTAGGTTGTCTCTTGGTGCTTATTGTCTCGCCTCTGGCTTTGGCTGCGGC  Raphanus sativus var. oleiformis
EY941959       --> TTAGGTTGTCTCTTGGTGCTTATTGTCTCGCCTCTGGCTTTGGCTGCGGC  Raphanus sativus cv Rat-Tail Radish #3870
EY901933       --> TTAGGTTGTCTCTTGGTGCTTATTGTCTCGCCTCTGGCTTTGGCTGCAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766680       --> TTAGGTTGTCTCTTGGTGCTTATTGTATCGCCTCTGGTTTTGGCTGCGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768795       --> TTAGGTTGTCTCTTGGTGCTTATTGTATCGCCTCTGGCTTTGGCTGCGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD953078       --> TTAGGTTGTCTCTTGGTGCTTATTGTCTCGCCTCTGGCTTTGGCTGCGGC  Raphanus sativus cv Rat-Tail Radish #3870
EW739495       --> TTAGGTTGTCTCTTGGTGCTTATTGTATCCCCTCTGGCTTTGGCTGCGGC  Raphanus sativus cv Rat-Tail Radish #3870
FD984849       --> TTAGGTTGTCTCTTGGTGCTTATTGTCTCGCCTCTGGCTTTGGCTGCGGC  Raphanus raphanistrum subsp. landra

               301    -    351
UN14451        --> CTTGAGCTCATCGTTCTTCTTGATTCTAAGTTTGAACTCCTCTGCACACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW735397       <-- CTTGAGCTCATCGCTCTTCTTGATTCTAAGTTTGAACTCCTCTGCACACC
EY899240       <-- CTTGAGCTCATCGTTCTTCTTGATTCTAAGTTTGAACTCCTCTGCACACC
EY938580       <-- CTTGAGCTCATCGTTCTTCTTGATTCTAAGTTTGAACTCCTCTGCACACC
FY438091       <-- CTTGAGCTCATCGTTCTTCTTGATTCTAAGTTTGAACTCCTCTGCACACC
FD576446       <-- CTTGAGCTCATCGTTCTTCTTGATTCTAAGTTTGAACTCCTCTGCACACC
EY930650       <-- CTTGAGCTCATCGTTCTTCTTGATTCTAAGTTTGAACTCCTATGCACACC
FD535589       <-- CTTGAGCTCATCGTTCTTCTTGATTCTAAGTTTGAACTCCTCTGCACACC
EY931652       <-- CTTGAGCTCATCGTTCTTCTTGATTCTAAGTTTGAACTCCTATGCACACC
EX762425       <-- CTTGAGCTCATCGTTCTTCTTGATTCTAAGTTTGAACTCCTCTGCACACC
EY905514       <-- CTTGAGCTCATCGTTCTTCTTGATTCTAAGTTTGAACTCCTCTGCACACC
FD543731       <-- CTTGAGCTCATCGTTCTTCTTGATTCTAGGTTTGAACTCCTCTGCACACC
EX764977       <-- CTTGAGCTCATCGTTCTTCTTGATTCTAAGTTTGAACTCCTCTGCACACC
FD957363       <-- CTTGAGCTCATCGTTCTTCTTGATTCTAAGTTTGAACTCCTCTGCACACC
FD989012       <-- CTTGAGCTCATCGTTCTTCTTGATTCTAAGTTTGAACTCCTCTGCACACC
FD940245       <-- ..................................................
EY895064       --> CTTGAGCTCATCGTTCTTCTTGATTCTAAGTTTGAACTCCTCTGCACACC
EY934679       --> CTTGAGCTCATCGTTCTTCTTGATTCTAAGTTTGAACTCCTCTGCACACC
FD942785       --> CTTGAGCTCATCGTTCTTCTTGATTCTAAGTTTGAACTCCTCTGCACACC
FD580941       --> CTTGAGCTCATCGTTCTTCTTGATTCTAAGTTTGAACTCCTCTGCACACC
FD531221       --> CTTGAGCTCATCGTTCTTCTTGATTCTAAGTTTGAACTCCTCTGCACACC
FD936174       --> CTTGAGCTCATCGTTCTTCTTGATTCTAAGTTTGAACTCCTCTGCACACC
EY941959       --> CTTGAGCTCATCGTTCTTCTTGATTCTAAGTTTGAACTCCTCTGCACACC
EY901933       --> CTTGAGCTCATCGTTCTTCTTGATTCTAAGTTTGAACTCCTCTGCACACC
EX766680       --> CTTGAGCTCATCGTTCTTCTTGATTCTAAGTTTGAACTCCTCTGCACACC
EX768795       --> CTTGAGCTCATCGTTCTTCTTGATTCTAAGTTTGAACTCCTCTGCACACC
FD953078       --> CTTGAGCTCATCGTTCTTCTTGATTCTAAGTTTGAACTCCTCTGCACACC
EW739495       --> CTTGAGCTCATCGCTCTTCTTGATTCTAAGTTTGAACTCCTCTGCACACC
FD984849       --> CTTGAGCTCATCGTTCTTCTTGATTCTAAGTTTGAACTCCTCTGCACACC

               351    -    401
UN14451        --> TTGACTGCTGCACGTGCTCCACACGCACATGAAGCCTCTTCCTGATGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW735397       <-- TTGACTGCTGCACGTGCTCCACACGCACATGAAGCCTCTTCCTGATGATT
EY899240       <-- TTGACTGCTGCACGTGCTCCACACGCACATGAAGCCTCTTCCTGATGATT
EY938580       <-- TTGACTGCTGCACGTGCTCCACACGCACATGAAGCCTCTTCCTGATGATT
FY438091       <-- TTGACTGCTGCACGTGCTCCACACGCACATGAAGCCTCTTCCTGATGATT
FD576446       <-- TTGACTGCTGCACGTGCTCCACACGCACATGAAGCCTCTTCCTGATGATT
EY930650       <-- TTGACTGCTGCACGTGCTCCACACGCACATGAAGCCTCTTCCTGATGATT
FD535589       <-- TTGACTGCTGCACGTGCTCCACACGCACATGAAGCCTCTTCCTGATGATT
EY931652       <-- TTGACTGCTGCACGTGCTCCACACGCACATGAAGCCTCTTCCTGATGATT
EX762425       <-- TTGACTGCTGCACGTGCTCCACACGCACATGAAGCCTCTTCCTGATGATT
EY905514       <-- TTGACTGCTGCACGTGCTCCACACGCACATGAAGCCTCTTCCTGATGATT
FD543731       <-- TTGACTGCTGCACGTGCTCCACACGCACATGAAGCCTCTTCCTGATGATT
EX764977       <-- TTGACTGCTGCACGTGCTCCACACGCACATGAAGCCTCTTCCTGATGATT
FD957363       <-- TTGACTGCTGCACGTGCTCCACACGCACATGAAGCCTCTTCCTGATGATT
FD989012       <-- TTGACTGCTGCACGTGCTCCACACGCACATGAAGCCTCTTCCTGATGATT
FD940245       <-- ..................................................
EY895064       --> TTGACTGCTGCACGTGCTCCACACGCACATGAAGCCTCTTCCTGATGATT
EY934679       --> TTGACTGCTGCACGTGCTCCACACGCACATGAAGCCTCTTCCTGATGATT
FD942785       --> TTGACTGCTGCACGTGCTCCACACGCACATGAAGCCTCTTCCTGATGATT
FD580941       --> TTGACTGCTGCACGTGCTCCACACGCACATGAAGCCTCTTCCTGATGATT
FD531221       --> TTGACTGCTGCACGTGCTCCACACGCACATGAAGCCTCTTCCTGATGATT
FD936174       --> TTGACTGCTGCACGTGCTCCACACGCACATGAAGCCTCTTCCTGATGATT
EY941959       --> TTGACTGCTGCACGTGCTCCACACACACATGAAGCCTCTTCCTGATGATT
EY901933       --> TTGACTGCTGCACGTGCTCCACACGCACATGAAGCCTCTTCCTGATGATT
EX766680       --> TTGACTGCTGCACGTGCTCCACACGCACATGAAGCCTCTTCCTGATGATT
EX768795       --> TTGACTGCTGCACGTGCTCCACACGCACATGAAGCCTCTTCCTGATGATT
FD953078       --> TTGACTGCTGCACGTGCTCCACACGCACATGAAGCCTCTTCCTGATGATT
EW739495       --> TTGACTGCTGCACGTGCTCCACACGCACATGAAGCCTCTTCCTGATGATT
FD984849       --> TTGACTGCTGCACGTGCTCCACACGCACATGAAGCCTCTTCCTGATGATT

               401    -    451
UN14451        --> CTGTTACCAATCTGCTTGTTCACTTCGACACCGACGGCACGCTTGGTGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW735397       <-- CTGTTACCAATCTGCTTGTTCACTTCGACACCGACGGCACGCTTGGTGAC
EY899240       <-- CTGTTACCAATCTGCTTGTTCACTTCGACACCGACGGCACGCTTGGTGAC
EY938580       <-- CTGTTACCAATCTGCTTGTTCACTTCGACACCGACGGCACGCTTGGTGAC
FY438091       <-- CTGTTACCAATCTGCTTGTTCACTTCGACACCGACGGCACGCTTGGTGAC
FD576446       <-- CTGTTACCAATCTGCTTGTTCACTTCGACACCGACGGCACGCTTGGTGAC
EY930650       <-- CTGTTACCAATCTGCTTGTTCACTTCGACACCGACGGCACGCTTGGTGAC
FD535589       <-- CTGTTACCAATCTGCTTGTTCACTTCGACACCGACGGCACGCTTGGTGAC
EY931652       <-- CTGTTACCAATCTGCTTGTTCACTTCGACACCGACGGCACGCTTGGTGAC
EX762425       <-- ATGTTACCAATCTGCTTGTTCACTTCGACACCGACGGCACGCTTGGTGAC
EY905514       <-- CTGTTACCAATCTGCTTGTTGACTTCGACACCGACGGCACGCTTGGTGAC
FD543731       <-- CTGTTACCAATCTGCTTGTTGACTTCGACACCGACGGCACGCTTGGTGAC
EX764977       <-- CTGTTACCAATCTGCTTGTTCACTTCGACACCGACGGCACGCTTGGTGAC
FD957363       <-- CTGTTACCAATCTGCTTGTTCACTTCGACACCGACGGCACGCTTGGTGAC
FD989012       <-- CTGTTACCAATCTGCTTGTTCACTTAGACACCGACGGCACGCTTGGTGAC
FD940245       <-- ..................................................
EY895064       --> CTGTTACCAATCTGCTTGTTCAC...........................
EY934679       --> CTGTTACCAATCTGCTTGTTCACTTCGACACCGACGGCACGCTTGGTGAC
FD942785       --> CTGTTACCAATCTGCTTGTTCACTTCGACACCGACGGCACGCTTGGTGAC
FD580941       --> CTGTTACCAATCTGCTTGTTCACTTCGACACCGACGGCACGCTTGGTGAC
FD531221       --> CTGTTACCAATCTGCTTGTTCACTTCGACACCGACGGCACGCTTGGTGAC
FD936174       --> CTGTTACCAATCTGCTTGTTCACTTCGACACCGACGGCACGCTTGGTGAC
EY941959       --> CTGTTACCAATCTGCTTGTTCACTTCGACACCGACGGCACGCTTGGTGAC
EY901933       --> CTGTTACCAATCTGCTTGTTGACTTCGACACCGACGGCACGCTTGGTGAC
EX766680       --> ATGTTACCAATCTGCTTGTTCACTTCGACACCGACGGCACGCTTGGTGAC
EX768795       --> CTGTTACCAATCTGCTTGTTCACTTCGACACCGACGGCACGCTTGGTGAC
FD953078       --> CTGTTACCAATCTGCTTGTTCACTTCGACACCGACGGCACGCTTGGTGAC
EW739495       --> CTGTTACCAATCTGCTTGTTCACTTCCACACCGACGGCACGCTTGGTGAC
FD984849       --> CTGTTACCAATCTGCTTGTTCACTTAGACACCGACGGCACGCTTGGTGAC

               451    -    501
UN14451        --> GTTCCAGACACGACCGGTACGACCGTGGTAGAACTTGTGAGGCATACCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW735397       <-- GTTCCAGACACGACCGGTACGACCATGGTAGAACTTGTGGGGCATACCCT  Raphanus sativus cv Rat-Tail Radish #3870
EY899240       <-- GTTCCAGACACGACCGGTACGACCATGGTAGAACTTGTGAGGCATACCCT  Raphanus raphanistrum subsp. maritimus
EY938580       <-- GTTCCAGACACGACCGGTACGACCGTGGTAGAACTTGTGAGGCATACCCT  Raphanus sativus cv Early Scarlet Globe
FY438091       <-- GTTCCAGACACGACCGGTACGACCGTGGTAGAACTTGTGAGGCATACCCT  Raphanus sativus cv GSK3-1
FD576446       <-- GTTCCAGACACGACCGGTACGACCGTGGTAGAACTTGTGAGGCATACCCT  Raphanus sativus cv Rat-Tail Radish #3870
EY930650       <-- GTTCCAGACACGACCGGTACGACCGTGGTAGAACTTGTGAGGCATACCCT  Raphanus sativus var. oleiformis
FD535589       <-- GTTCCAGACACGACCGGTACGACCGTGGTAGAACTTGTGAGGCATACCCT  Raphanus raphanistrum subsp. maritimus
EY931652       <-- GTTCCAGACACGACCGGTACGACCGTGGTAGAACTTGTGAGGCATACCCT  Raphanus sativus var. oleiformis
EX762425       <-- GTTCCAGACACGACCGGTACGACCATGGTAGAACTTGTGAGGCATACCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY905514       <-- GTTCCAGACACGACCGGTACGACCGTGGTAGAACTTGTGAGGCATACCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543731       <-- GTTCCAGACACGACCGGTACGACCGTGGTAGAACTTGTGAGGCATACCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX764977       <-- GTTCCAGACACGACCGGTACGACCATGGTAGAACTTGTGAGGCATACCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD957363       <-- GTTCCAGACACGACCGGTACGACCGTGGTAGAACTTGTGAGGCATACCCT  Raphanus sativus cv Rat-Tail Radish #3870
FD989012       <-- GTTCCAGACACGACCGGTACGACCGTGGTAGAACTTGTGAGGCATACCCT  Raphanus raphanistrum subsp. landra
FD940245       <-- ..................................................  Raphanus sativus var. oleiformis
EY895064       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY934679       --> GTTCCAGACACGACCGGTACGACCGTGGTAGAACTTGTGAGGCATACCCT  Raphanus sativus cv Early Scarlet Globe
FD942785       --> GTTCCAGACACGACCGGTACGACCGTGGTAGAACTTGTGAGGCATACCCT  Raphanus sativus cv Early Scarlet Globe
FD580941       --> GTTCCAGACACGACCGGTACGACCGTGGTAGAACTTGTGAGGCATACCCT  Raphanus sativus cv Rat-Tail Radish #3870
FD531221       --> GTTCCAGACACGACCGGTACGACCGTGGTAGAACTTGTGAGGCATACCCT  Raphanus raphanistrum subsp. maritimus
FD936174       --> GTTCCAGACACGACCGGTACGACCGTGGTAGAACTTGTGAGGCATACCCT  Raphanus sativus var. oleiformis
EY941959       --> GTTCCAGACACGACCGGTACGACCGTGGTAGAACTTGTGAGGCATACCCT  Raphanus sativus cv Rat-Tail Radish #3870
EY901933       --> GTTCCAGACACGACCGGTACGACCGTGGTAGAACTTGTGAGGCATACCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766680       --> GTTCCAGACACGACCGGTACGACCATGGTAGAACTTGTGAGGCATACCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768795       --> GTTCCAGACACGACCGGTACGACCATGGTAGAACTTGTGAGGCATACCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD953078       --> GTTCCAGACACGACCGGTACGACCGTGGTAGAACTTGTGAGGCATACCCT  Raphanus sativus cv Rat-Tail Radish #3870
EW739495       --> GTT...............................................  Raphanus sativus cv Rat-Tail Radish #3870
FD984849       --> GTTCCAGACACGACCGGTACGACCGTGGTAGAACTTGTGAGGCATACCCT  Raphanus raphanistrum subsp. landra

               501    -    551
UN14451        --> TGTGGATCGCACCGTTCACCTTAACATCGACGTAATCGCCGACCTTGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW735397       <-- TGTGGATCGCACCGTTCACCTTAACATCGACGTAATCGCCGACCTTGAAG
EY899240       <-- TGTGGATCGCACCGTTCACCTTAACATCGACGTAATCGCCGACCTTGAAG
EY938580       <-- TGTGGATCGCACCGTTCACCTTAACATCGACGTAATCGCCGACCTTGAAG
FY438091       <-- TGTGGATCGCACCGTTCACCTTAACATCGACGTAATCGCCGACCTTGAAG
FD576446       <-- TGTGGATCGCACCGTTCACCTTAACATCGACGTAATCCCCGACCTTGAAG
EY930650       <-- TGTGGATCGCGCCGTTCACCTTAACATCGACGTAATCCCCGACCTTGAAG
FD535589       <-- TGTGGATCGCACCGTTCACCTTAACATCGACGTAATCCCCGACCTTGAAG
EY931652       <-- TGTGGATCGCGCCGTTCACCTTAACATCGACGTAATCCCCGACCTTGAAG
EX762425       <-- TGTGGATCGCACCGTTCACCTTAACATCGACGTAATCGCCGACCTTGAAG
EY905514       <-- TGTGGATCGCACCGTTCACCTTAACATCGACGTAATCGCCGACCTTGAAt
FD543731       <-- TGTGGATCGCACCGTTCACCTTAACATCGACGTAATCGCCGACCTTGAAT
EX764977       <-- TGTGGATCGCACCGTTCACCTTAACATCGACGTAATCGCCGACCTTGAAG
FD957363       <-- TGTGGATCGCACCGTTCACCTTAACATCGACGTAATCCCCGACCTTGAAG
FD989012       <-- TGTGGATCGCACCGTTCACCTTAACATCGACGTAATCGCCGACCTTGAAG
FD940245       <-- .........................................ACCTTGAAG
EY895064       --> ..................................................
EY934679       --> TGTGGATCGCACCGTTCACCTTAACATCGACGTAATCGCCGACCTTGAAG
FD942785       --> TGTGGATCGCACCGTTCACCTTAAC.........................
FD580941       --> TGTGGATCGCACCGTTCACCTTAACATCGACGTAATCCCCGACCTTGAAG
FD531221       --> TGTGGATCGCACCGTTCACCTTAACATCGACGTAATCCCCGACCTTGAAG
FD936174       --> TGTGGATCGCACCGTTCACCTTAACATCGACGTAATCGCCGACCTTGAAG
EY941959       --> TGTGGATCGCACCGTTCACCTTAACATCGACGTAATCCCCGACCTTGAAG
EY901933       --> TGTGGATCGCACCGTTCACCTTAACATCGACGTAATCGCCGACCTTGAAT
EX766680       --> TGTGGATCGCACCGTTCACCTTAACATCGACGTAATCGCCGACCTTGAAG
EX768795       --> TGTGGATCGCACCGTTCACCTTAACATCGACGTAATCGCCGACCTTGAAG
FD953078       --> TGTGGATCGCACCGTTCACCTTAACATCGACGTAATCCCCGACCTTGAAG
EW739495       --> ..................................................
FD984849       --> TGTGGATCGCACCGTTCACCTTAACATCGACGTAATCGCCGACCTTGAAG

               551    -    601
UN14451        --> GTCCTGAGGTAGGTCGAGAGTGGGATTGTACCCTTCTTCCTGAACCCCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW735397       <-- GTCCTGAGGTAGGTGGACAATGGGATTGTACCCTTCTTCCTGAACCCCCT  Raphanus sativus cv Rat-Tail Radish #3870
EY899240       <-- GTCCTGAGGTAGGTGGACAATGGGATTGTACCCTTCTTCCTGAACCCCCT  Raphanus raphanistrum subsp. maritimus
EY938580       <-- GTCCTGAGGTAGGTCGAGAGTGGGATTGTACCCTTCTTCCTGAACCCCCT  Raphanus sativus cv Early Scarlet Globe
FY438091       <-- GTCCTGAGGTAGGTCGAGAGTGGGATTGTACCCTTCTTCCTGAACCCCCT  Raphanus sativus cv GSK3-1
FD576446       <-- GTCCTGAGGTATGTCGAGAGTGGGATTGTACCCTTCTTCCTGAACCCCCT  Raphanus sativus cv Rat-Tail Radish #3870
EY930650       <-- GTCCTGAGGTATGTCGAGAGTGGGATTGTACCCTTCTTCCTGAACCCCCT  Raphanus sativus var. oleiformis
FD535589       <-- GTCCTGAGGTATGTCGAGAGTGGGATTGTACCCTTCTTCCTGAACCCCCT  Raphanus raphanistrum subsp. maritimus
EY931652       <-- GTCCTGAGGTATGTCGAGAGTGGGATTGTACCCTTCTTCCTGAACCCCCT  Raphanus sativus var. oleiformis
EX762425       <-- GTCCTGAGGTAGGTGGACAATGGGATTGTACCCTTCTTCCTGAACCCCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY905514       <-- gt................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543731       <-- GTCCCGAGGTAGGTCGAGAGTGGGATTGTACCCTTCTTCCTGAACCCCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX764977       <-- GTCCTGAGGTAGGTGGACAATGGGATTGTACCCTTCTTCCTGAACCCCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD957363       <-- GTCCTGAGGTATGTCGAGAGTGGGATTGTACCCTTCTTCCTGAACCCCCT  Raphanus sativus cv Rat-Tail Radish #3870
FD989012       <-- GTCCTGAGGTAGGTCGAGAGTGGGATTGTACCCTTCTTCCT.........  Raphanus raphanistrum subsp. landra
FD940245       <-- GTCCTGAGGTAGGTCGAGAGTGGGATTGTACCCTTCTTCCTGAACCCCCT  Raphanus sativus var. oleiformis
EY895064       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY934679       --> GTCCTGAGGTAGGTCGAGAGTGGGATTGTACCCTTCTTCCTGAACCCCCT  Raphanus sativus cv Early Scarlet Globe
FD942785       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD580941       --> GTCCTGAGGTATGTCGAGAGTGGGATTGTACCCTTCTTCCTGAACCCCCT  Raphanus sativus cv Rat-Tail Radish #3870
FD531221       --> GTCCTGAGGTATGTCGAGAGTGGGATTGTACCCTTCTTCCTGAACCCCCT  Raphanus raphanistrum subsp. maritimus
FD936174       --> GTCCTGAGGTAGGTCGAGAGTGGGATTGTACCCTTCTTCCTGAACCCCCT  Raphanus sativus var. oleiformis
EY941959       --> GTCCTGAGGTATGTCGAGAGTGGGATTGTACCCTTCTTCCTGAACCCCCT  Raphanus sativus cv Rat-Tail Radish #3870
EY901933       --> GTCCTGAGGTAGGTCGAGAGTGGGATTGTACCCTTCTTCCTGAACCCCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766680       --> GTCCTGAGGTAGGTGGACAATGGGATTGTACCCTTCTTCCTGAACCCCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768795       --> GTCCTGAGGTAGGTGGACAATGGGATTGTACCCTTCTTCCTGAACCCCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD953078       --> GTCCTGAGGTATGTCGAGAGTGGGATTGTACCCTTCTTCCTGAACCCCCT  Raphanus sativus cv Rat-Tail Radish #3870
EW739495       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD984849       --> GTCCTGAGGTAGGTCGAGAGTGGGATTGTACCCTTCTTCCTGAACCCCCT  Raphanus raphanistrum subsp. landra

               601    -    651
UN14451        --> CGCGAACAGATCCCTCGTCCTCGCACGAACTCCATGTCCTGCCGGCATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW735397       <-- CGCGAACAGATCCCTCGTCCTCGCACGAACTCCATGTCCTGCCGGCATTT
EY899240       <-- CGCGAACAGATCCCTCGTCCTCGCACGAACTCCATGTCCTGCCGGCATTT
EY938580       <-- CGCGAACAGATCCCTTGTCCTCGCACGAACTCCATGTCCTGCCGGCATTT
FY438091       <-- CGCGAACAGATCCCTTGTCCTCGCACGAACTCCATGTCCTGCCGGCATTT
FD576446       <-- CGCGAACAGATCCCTCGTCCTCGCACGAACTCCATGTCCTGCCGGCATTT
EY930650       <-- CGCGAACAGATCCCTCGTCCTCGCACGAACTCCATGTCCTGCCGGCATTT
FD535589       <-- CGCGAACAGATCCCTCGTCCTCGCACGAACTCCATGTCCTGCCGGCATTT
EY931652       <-- CGCGAACAGATCCCTCGTCCTCGCACGAACTCCATGTCCTGCCGGCATTT
EX762425       <-- CGCGAACAGATCCCTCGTCCTCGCACGAACTCCATGTCCTGCCGGCATTT
EY905514       <-- ..................................................
FD543731       <-- CGCGAACAGATCCCTCGTCCTCGCACGAACTCCATGACCTGCCGGCATTT
EX764977       <-- CGCGAACAGATCCCTCGTCCTCGCACGAACTCCATGTCCTGCCGGCATTT
FD957363       <-- CGCGAACAGATCCCTCGTCCTCGCACGAACTCCATGTCCTGCCGGCATTT
FD989012       <-- ..................................................
FD940245       <-- CGCGAACAGATCCCTTGTCCTCGCACGAACTCCATGTCCTGCCGGCATTT
EY895064       --> ..................................................
EY934679       --> CGCGAACAG.........................................
FD942785       --> ..................................................
FD580941       --> CGCGAACAGATCCCTCGTCCTCGCACGAACTCCATGTCCTGCCGGCATTT
FD531221       --> CGCGAACAGATCCCTCGTCCTCGCACGAACTCCATGTCCTGCCGGCATTT
FD936174       --> CGCGAACAGATCCCTTGTCCTCGCACGAACTCCATGTCCTGCCGGCATTT
EY941959       --> CGCGAACAGATCCCTCGTCCTCGCACGAACTCCATGTCCTGCCGGCATTT
EY901933       --> CGCGAACAGATCCCTCGTCCTCGCACGAACTCCATGACCTGCCGGCATTT
EX766680       --> CGCGAACAGATCCCTCGTCCTCGCACGAACTCCATGTCCTGCCGGCATTT
EX768795       --> CGCGAACAGATCCCTCGTCCTCGCACGAACTCCATGTCCTGCCGGCATTT
FD953078       --> CGCGAACAGATCCCTCGTCCTCGCACGAACTCCATGTCCTGCCGGCATTT
EW739495       --> ..................................................
FD984849       --> CGCGAACAGATCCCTCGTCATAGCACGAACTCCATGTCCTGCCGGCATTT

               651    -    701
UN14451        --> T-TC--C-TC---TTGGGTGGATGCGTCAAGTGAAACCTAAAATCGCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW735397       <-- T-TC--C-TC---TTGGGTGGATGCGTCAAGTGAAACCTAAAATCGCAAG
EY899240       <-- T-TC--C-TC---TTGGGTGGATGCGTCAAGTGAAACCTAAAATCGCAAG
EY938580       <-- T-TC--C-TC---TTGGGTGGATGCGTCAAGTGAAACCTAAAATCGCca.
FY438091       <-- T.................................................
FD576446       <-- T-TCTTCGTC---TTGGTGGGATGCGTCAAGTGAAACCTAAAATCGCcc.
EY930650       <-- T-TCTTCGTC---TTGGTGGGATGCGTCAAGTGAAACCTAAAATCGCAAG
FD535589       <-- T-TCTTCGTC---TTGGTGGGATGCGTCAAGTGAAACCTAAAATCGCcc.
EY931652       <-- T-TCTTCGTC---TTGGTGGGATGCGTCAAGTGAAACCTAAAATCGCAAG
EX762425       <-- T-TC--C-TC---TTGGGTGGATGCGTCAAGTGAAACCTAAAATCGCtag
EY905514       <-- ..................................................
FD543731       <-- TCTC--C-TCGTCTTGGGTGGATGCGTCAAGTGAAACCTAAAATCGCTAG
EX764977       <-- T-TC--C-TC---TTGGGTGGATGCGTCAAGTGAAACCTAAAATCGCAAG
FD957363       <-- T-TCTTCGTC---TTGGTGGGATGCGTCAAGTGAAACCTAAAATCGCcc.
FD989012       <-- ..................................................
FD940245       <-- T-TC--C-TC---TTGGGTGGATGCGTCAAGTGAAACCTAAAATCGCccc
EY895064       --> ..................................................
EY934679       --> ..................................................
FD942785       --> ..................................................
FD580941       --> T-TCTTCGTC---TTGGTGGGATGCGTCAAGTGAAACCTAAAATCGCcc.
FD531221       --> T-TCTTCGTC---TTGGTGGGATGCGTCAAGTGAAACCTAAAATCGCcc.
FD936174       --> T.................................................
EY941959       --> T-TCtt............................................
EY901933       --> TCTC--C-TCGTCTTGGGTGGATGCGTCAAGTGAAACCTAAAATCGCTAG
EX766680       --> T-TC--C-TC---TTGGGTGGATGCGTCAAGTGAAACCTAAAATCGCtag
EX768795       --> T-TC--C-TC---TTGGGTGGATGCGTCAAGTGAAACCTAAAATCGCAAG
FD953078       --> T-TCTTCGTC---TTGGTGGGATGCGTCAAGTGAAACCTAAAATCGCcc.
EW739495       --> ..................................................
FD984849       --> T-TC--C-TC---TTGGGTGGATGCGTCAAGTGAAACCTAAAATCGCcc.

               701    -    751
UN14451        --> CC....
                   ~~~~~~
EW735397       <-- CC....
EY899240       <-- CC....
EY938580       <-- ......
FY438091       <-- ......
FD576446       <-- ......
EY930650       <-- CC....
FD535589       <-- ......
EY931652       <-- CC....
EX762425       <-- aagtcc
EY905514       <-- ......
FD543731       <-- CC....
EX764977       <-- CC....
FD957363       <-- ......
FD989012       <-- ......
FD940245       <-- t.....
EY895064       --> ......
EY934679       --> ......
FD942785       --> ......
FD580941       --> ......
FD531221       --> ......
FD936174       --> ......
EY941959       --> ......
EY901933       --> CC....
EX766680       --> aagtcc
EX768795       --> CC....
FD953078       --> ......
EW739495       --> ......
FD984849       --> ......