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Alignment for radish unigene UN14518

               1      -     51
UN14518        --> TTTTTTCTTACATAACAAAGATAGAGAGAGAGAAAGCCTTGGTGGGTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547568       <-- ..............................................TTCA
EX753936       <-- ..................................................
FD546351       <-- ..................................................
EX901521       <-- ..................................................
EW721088       <-- ..................................................
FD937797       --> TTTTTTCTTACATAACAAAGATAGAGAGAGAGAAAGCCTTGGTGGGTTCA
EW722597       --> .............ggataacaaAGATAGAGAGAAAGCCTTGGTGGGTTCA
EX897829       --> ...........ggacataacaaAGATAGAGAGAAAGCCTTGGTGGGTTCA
EX888169       --> ......................................gaGGTGGGTTCA
FD551728       --> .......................................gGGTGGGTTCA
EV525729       --> .........................................ggGGGTTCA
EW717096       --> ..........................................gGGGTTCA
FD938942       --> ..........................................gGGGTTCA
FD550383       --> ..................................................

               51     -    101
UN14518        --> ATAGATTCTT-TCT---CTTGTCTTGTCTCTTCAAAGCCACGCCCCGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547568       <-- ATAGAT-CTT-TCT---CT-GTC-TGTCTCT-CAAAGCCACGCCCCGTTG
EX753936       <-- ..................................................
FD546351       <-- ..................................................
EX901521       <-- ..................................................
EW721088       <-- ..................................................
FD937797       --> ATAGATTCTT-TCT---CTTGTCTTGTCTCTTCAAAGCCACGCCCCGTTG
EW722597       --> ATAGATTCTTCTCTTGTCTTGTCTTGTCTCTTCAAAGCCACGCCCCGTTG
EX897829       --> ATAGATTCTT--CT---CTTGTCTTGTCTCTTCAAAGCCACGCCCCGTTG
EX888169       --> ATAGATTCTT-TCT---CTTGTCTTGTCTCTTCAAAGCCACGCCCCGTTG
FD551728       --> ATAGATTCTT-TCT---CTTGTCTTGTCTCTTCAAAGCCACGCCCCGTTG
EV525729       --> ATAGATTCTT-TCT---CTTGTCTTGTCTCTTCAAAGCCACGCCCCGTTG
EW717096       --> ATAGATTCTT-TCT---CTTGTCTTGTCTCTTCAAAGCCACGCCCCGTTG
FD938942       --> ATAGATTCTT-TCT---CTTGTCTTGTCTCTTCAAAGCCACGCCCCGTTG
FD550383       --> ..................................................

               101    -    151
UN14518        --> GTAAAGATGGAGGAACAGTTCATACTTAGGGTTCCACAGTCTGTTTCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547568       <-- -TAAAGATGGAGGAACAGTTCATACTTAGGGTTCCACAGTCTGTTTCAGA
EX753936       <-- ..................................................
FD546351       <-- ..................................................
EX901521       <-- ..................................................
EW721088       <-- ..................................................
FD937797       --> GTAAAGATGGAGGAACAGTTCATACTTAGGGTTCCACAGTCTGTTTCAGA
EW722597       --> GTAAAGATGGAGGAACAGTTCATACTTAGGGTTCCACAGTCTGTTTCAGA
EX897829       --> GTAAAGATGGAGGAACAGTTCATACTTAGGGTTCCACCGTCTGTTTCAGA
EX888169       --> GTAAAGATGGAGGAACAGTTCATACTTAGGGTTCCACAGTCTGTTTCAGA
FD551728       --> GTAAAGATGGAGGAACAGTTCATACTTAGGGTTCCACAGTCTGTTTCAGA
EV525729       --> GTAAAGATGGAGGAACAGTTCATACTTAGGGTTCCACAGTCTGTTTCAGA
EW717096       --> GTAAAGATGGAGGAACAGTTCATACTTAGGGTTCCACAGTCTGTTTCAGA
FD938942       --> GTAAAGATGGAGGAACAGTTCATACTTAGGGTTCCACAGTCTGTTTCAGA
FD550383       --> .........ggGGAACAGTTCATACTTAGGGTTCCACAGTCTGTTTCAGA

               151    -    201
UN14518        --> GCGAATCGATCGCCTTTTGAGCGACGAGGCTTCTTCTACTTCCGACGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547568       <-- GCGAATCGATCGCCTTTTGAGCGACGAGGCTTCTTCTACTTCCGACGAGA
EX753936       <-- ...................AGCGACGAGGCTTCTTCTACTTCCGACGAGA
FD546351       <-- ..................................................
EX901521       <-- ..................................................
EW721088       <-- ..................................................
FD937797       --> GCGAATCGATCGCCTTTTGAGCGACGAGGCTTCTTCTACTTCCGACGAGA
EW722597       --> GCGAATCGATCGCCTTTTGAGCGACGAGGCTTCTTCTACTTCCGACGAGA
EX897829       --> GCGAATCGATCGCCTTTTGAGCGACGAGGCTTCTTCTACTTCCGACGACA
EX888169       --> GCGAATCGATCGCCTTTTGAGCGACGAGGCTTCTTCTACTTCCGACGAGA
FD551728       --> GCGAATCGATCGCCTTTTGAGCGACGAGGCTTCTTCTACTTCCGACGAGA
EV525729       --> GCGAATCGATCGCCTTTTGAGCGACGAGGCTTCTTCTACTTCCGACGAGA
EW717096       --> GCGAATCGATCGCCTTTTGAGCGACGAGGCTTCTTCTACTTCCGACGAGA
FD938942       --> GCGAATCGATCGCCTTTTGAGCGACGAGGCTTCTTCTACTTCCGACGAGA
FD550383       --> GCGAATCGATCGCCTTTTGAGCGACGAGGCTTCTTCTACTTCCGACGAGA

               201    -    251
UN14518        --> TCCCTTTAGATTTATGCTTTTCAGAGGATGGGAGAAGCGGGACGTTTGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547568       <-- TCCCTTTAGATTTATGCTTTTCAGAGGATGGGAGAAGCGGGACGTTTGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX753936       <-- TCCCTTTAGATTTATGCTTTTCAGAGGATGGGAGAAGCGGGACGTTTGTA  Raphanus raphanistrum subsp. maritimus
FD546351       <-- .......AGATTTATGCTTTTCAGAGGATGGGAGAAGCGGGACGTTTGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901521       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW721088       <-- ..................................................  Raphanus sativus var. oleiformis
FD937797       --> TCCCTTTAGATTTGTGCTTTTCAGAGGATGGGAGAAGCGGGACGTTTGTA  Raphanus sativus var. oleiformis
EW722597       --> TCCCTTTAGATTTATGCTTTTCAGAGGATGGGAGAAGCGGGACGTTTGTT  Raphanus sativus cv Early Scarlet Globe
EX897829       --> TCCCTTTAGATTTATGCTTTTCAGAGGATGGGAGAAGCGGGACGTTTGTA  Raphanus sativus cv Early Scarlet Globe
EX888169       --> TCCCTTTAGATTTGTGCTTTTCAGAGGATGGGAGAAGCGGGACGTTTGTA  Raphanus sativus var. oleiformis
FD551728       --> TCCCTTTAGATTTATGCTTTTCAGAGGATGGGAGAAGCGGGACGTTTGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV525729       --> TCCCTTTAGATTTATGCTTTTCAGAGGATGGGAGAAGCGGGACGTTTGTA  Raphanus raphanistrum subsp. maritimus
EW717096       --> TCCCTTTAGATTTGTGCTTTTCAGAGGATGGGAGAAGCGGGACGTTTGTA  Raphanus sativus var. oleiformis
FD938942       --> TCCCTTTAGATTTGTGCTTTTCAGAGGATGGGAGAAGCGGGACGTTTGTA  Raphanus sativus var. oleiformis
FD550383       --> TCCCTTTAGATTTATGCTTTTCAGAGGATGGGAGAAGCGGGACGTTTGTA  Raphanus raphanistrum subsp. raphanistrum (NY)

               251    -    301
UN14518        --> ATTGGAAACGAAGAGTTCCCGGCTTCTCTGCTGGACCTTCCTGCTGTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547568       <-- ATTGGAAACGAAGAGTTCCCGGCTTCTCTGCTGGACCTTCCTGCTGTTGT
EX753936       <-- ATTGGAAACGAAGAGTTCCCGGCTTCTCTGCTGGACCTTCCTGCTGTTGT
FD546351       <-- ATTGGAAACGAAGAGTTCCCGGCTTCTCTGCTGGACCTTCCTGCTGTTGT
EX901521       <-- ..................................................
EW721088       <-- ..................................................
FD937797       --> ATTGGAAACGAAGAGTTCCCGGCTTCTCTGCTGGACCTTCCTGCTGTTGT
EW722597       --> ATTGGAAACGAAGAGTTCCCGGCTTCTCTGCTGGACCTTCCTGCTGTTGT
EX897829       --> ATTGGAAACGAAGAGTTCCCGGCTTCTCTGCTGGACCTTCCTGCTGTTGT
EX888169       --> ATTGGAAACGGAGATTTCCCGGCTTCTCTGCTGGACCTTCCTGCTGTTGT
FD551728       --> ATTGGAAACGAAGAGTTCCCGGCTTCTCTGCTGGACCTTCCTGCTGTTGT
EV525729       --> ATTGGAAACTAAGAGTTCCCGGCTTCTCTGCTGGACCTTCCTGCTGTTGT
EW717096       --> ATTGGAAACGAAGAGTTCCCGGCTTCTCTGCTGGACCTTCCTGCTGTTGT
FD938942       --> ATTGGAAACGAAGAGTTCCCGGCTTCTCTGCTGGACCTTCCTGCTGTTGT
FD550383       --> ATTGGAAACGAAGAGTTCCCGGCTTCTCTGCTGGACCTTCCTGCTGTTGT

               301    -    351
UN14518        --> TGAGTCTTTCAAAACTTATGATGACTCTGCACTTGTCAAAACTGCTGACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547568       <-- TGGGTCTTTCAAAACTTATGATGACTCTGCACTTGTCAAAACTGCTGACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX753936       <-- TGAGTCTTTCAAAACTTATGATGACTCTGCACTTGTCAAAACTGCTGACA  Raphanus raphanistrum subsp. maritimus
FD546351       <-- TGAGTCTTTCAAAACTTATGATGACTCTGCACTTGTCAAAACTGCTGACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901521       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW721088       <-- ..................................................  Raphanus sativus var. oleiformis
FD937797       --> TGAGTCTTTTAAAACTTATGATGACTCTGCACTTGTCAAAACTGCTGACA  Raphanus sativus var. oleiformis
EW722597       --> TGAGTCTTTCAAAACTTATGATGACTCTGCACTTGTCAAAACTGCTGACA  Raphanus sativus cv Early Scarlet Globe
EX897829       --> TGAGTCTTTTAAAACTTATGATGACTCTGCACTTGTCAAAACTGCTGACA  Raphanus sativus cv Early Scarlet Globe
EX888169       --> TGAGTCTTTTAAAACTTATGATGACTCTGCACTTGTCAAAACTGCTGACA  Raphanus sativus var. oleiformis
FD551728       --> TGGGTCTTTCAAAACTTATGATGACTCTGCACTTGTCAAAACTGCTGACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV525729       --> TGAGTCTTTCAAAACTTATGATGACTCTGCACTTGTCAAAACTGCTGACA  Raphanus raphanistrum subsp. maritimus
EW717096       --> TGAGTCTTTTAAAACTTATGATGACTCTGCACTTGTCAAAACTGCTGACA  Raphanus sativus var. oleiformis
FD938942       --> TGAGTCTTTTAAAACTTATGATGACTCTGCACTTGTCAAAACTGCTGACA  Raphanus sativus var. oleiformis
FD550383       --> TGAGTCTTTCAAAACTTATGATGACTCTGCACTTGTCAAAACTGCTGACA  Raphanus raphanistrum subsp. raphanistrum (NY)

               351    -    401
UN14518        --> TTGGCCAGATGATCATGGTTAGGGAGCAGGGAGATCCTGCGCCTAATACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547568       <-- TTGGCCAGATGATCATGGTTAGAGAGCAGGGAGATCCTGCGCCTAATACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX753936       <-- TTGGCCAGATGATCATGGTTAGAGAGCAGGGAGATCCTGCGCCTAATACA  Raphanus raphanistrum subsp. maritimus
FD546351       <-- TTGGCCAGATGATCATGGTTAGAGAGCAGGGAGATCCTGCGCCTAATACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901521       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW721088       <-- ..................................................  Raphanus sativus var. oleiformis
FD937797       --> TTGGCCAGATGATCATGGTTAGGGAGCAGGGTGATCCTGCGCCTAATACA  Raphanus sativus var. oleiformis
EW722597       --> TTGGCCAGATGATCATGGTTAGGGAGCAGGGAGATCCTGCGCCTAATACA  Raphanus sativus cv Early Scarlet Globe
EX897829       --> TTGGCCAGATGATCATGGTTAGGGAGCAGGGTGATCCTGCGCCTAATACA  Raphanus sativus cv Early Scarlet Globe
EX888169       --> TTGGCCAGATGATCATGGTTAGGGAGCAGGGTGATCCTGCGCCTAATACA  Raphanus sativus var. oleiformis
FD551728       --> TTGGCCAGATGATCATGGTTAGAGAGCAGGGAGATCCTGCGCCTAATACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV525729       --> TTGGCCAGATGATCATGGTTAGAGAGCAGGGAGATCCTGCGCCTAATACA  Raphanus raphanistrum subsp. maritimus
EW717096       --> TTGGCCAGATGATCATGGTTAGGGAGCAGGGTGATCCTGCGCCTAATACA  Raphanus sativus var. oleiformis
FD938942       --> TTGGCCAGATGATCATGGTTAGGGAGCAGGGTGATCCTGCGCCTAATACA  Raphanus sativus var. oleiformis
FD550383       --> TTGGCCAGATGATCATGGTTAGAGAGCAGGGAGATCCTGCGCCTAATACA  Raphanus raphanistrum subsp. raphanistrum (NY)

               401    -    451
UN14518        --> GTTGAGTACAGACATGGTCTAACTCCTCCTATGAAGGATGCTCGTAAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547568       <-- GTTGAATACAGACATGGTCTAACTCCTCCTATGAAGGATGCTCGTAAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX753936       <-- GTTGAATACAGACATGGTCTAACTCCTCCTATGAAGGATGCTCGTAAGAG  Raphanus raphanistrum subsp. maritimus
FD546351       <-- GTTGAATACAGACATGGTCTAACTCCTCCTATGAAGGATGCTCGTAAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901521       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW721088       <-- ..................................................  Raphanus sativus var. oleiformis
FD937797       --> GTTGAGTACAGACATGGTCTAACTCCTCCTATGAAGGATGCTCGTAAGAG  Raphanus sativus var. oleiformis
EW722597       --> GTTGAGTACAGACATGGTCTAACTCCTCCTATGAAGGATGCTCGTAAGAG  Raphanus sativus cv Early Scarlet Globe
EX897829       --> GTTGAGTACAGACATGGTCTAACTCCTCCTATGAAGGATGCTCGTAAGAG  Raphanus sativus cv Early Scarlet Globe
EX888169       --> GTTGAGTACAGACATGGTCTAACTCCTCCTATGAAGGATGCTCGTAAGAG  Raphanus sativus var. oleiformis
FD551728       --> GTTGAATACAGACATGGTCTAACTCCTCCTATGAAGGATGCTCGTAAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV525729       --> GTTGAATACAGACATGGTCTAACTCCTCCTATGAAGGATGCTCGTAAGAG  Raphanus raphanistrum subsp. maritimus
EW717096       --> GTTGAGTACAGACATGGTCTAACTCCTCCTATGAAGGATGCTCGTAAGAG  Raphanus sativus var. oleiformis
FD938942       --> GTTGAGTACAGACATGGTCTAACTCCTCCTATGAAGGATGCTCGTAAGAG  Raphanus sativus var. oleiformis
FD550383       --> GTTGAATACAGACATGGTCTAACTCCTCCTATGAAGGATGCTCGTAAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)

               451    -    501
UN14518        --> AAGATTTCGTCGAGAGCCTGATCTTAATCCGGAGCTTGTACAGCGCGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547568       <-- AAGATTTCGTCGAGAGCCTGATCTTAATCCGGAGCTTGTACAGCGCGTTG
EX753936       <-- AAGATTTCGTCGAGAGCCTGATCTTAATCCGGAGCTTGTACAGCGCGTTG
FD546351       <-- AAGATTTCGTCGAGAGCCTGATCTTAATCCGGAGCTTGTACAGCGCGTTG
EX901521       <-- ..................................................
EW721088       <-- ..................................................
FD937797       --> AAGATTTCGTCGAGAGCCTGATCTTAATCCGGAGCTTGTACAGCGCGTTG
EW722597       --> AAGATTTCGTCGAGAGCCTGATCTTAATCCGGAGCTTGTACAGCGCGTTG
EX897829       --> AAGATTTCGTCGAGAGCCTGATCTTAATCCGGAGCTTGTACAGCGCGTTG
EX888169       --> AAGATTTCGTCGAGAGCCTGATCTTAATCCGGAGCTTGTACAGCGCGTTG
FD551728       --> AAGATTTCGTCGAGAGCCTGATCTTAATCCGGAGCTTGTACAGCGCGTTG
EV525729       --> AAGATTTCGTCGAGAGCCTGATCTTAATCCGGAGCTTGTACAGCGCGTTG
EW717096       --> AAGATTTCGTCGAGAGCCTGATCTTAATCCGGAGCTTGTACAGCGCGTTG
FD938942       --> AAGATTTCGTCGAGAGCCTGATCTTAATCCGGAGCTTGTACAGCGCGTTG
FD550383       --> AAGATTTCGTCGAGAGCCTGATCTTAATCCGGAGCTTGTACAGCGCGTTG

               501    -    551
UN14518        --> AGAGGGACTTGCTGAACATCTTGAGTGGCAGAACTGTCGAAAACGGAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547568       <-- AGAGGGACTTGCTGAACATCTTGAGTGGCAGAACTGTCGAAAACGGAAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX753936       <-- AGAGGGACTTGCCGAACATCTTGAGTGGCAGAACTGTCGAAAACGGAAAT  Raphanus raphanistrum subsp. maritimus
FD546351       <-- AGAGGGACTTGCTGAACATCTTGAGTGGCAGAACTGTCGAAAACGGAAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901521       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW721088       <-- ..................................................  Raphanus sativus var. oleiformis
FD937797       --> AGAGGGACTTGCTCAACATCTTGAGTGGCAGAACTGTCGAAAACGGAAAT  Raphanus sativus var. oleiformis
EW722597       --> AGAGGGACTTGCTCAACATCTTGAGTGGCAGAACTGTCGAAAACGGAAAT  Raphanus sativus cv Early Scarlet Globe
EX897829       --> AGAGGGACTTGCTGAACATCTTGAGTGGCAGAACTGTCGAAAACGGAAAT  Raphanus sativus cv Early Scarlet Globe
EX888169       --> AGAGGGACTTGTTCAACATCTTGAGTGGCAGAACTGTCGAAAACGGAAAT  Raphanus sativus var. oleiformis
FD551728       --> AGAGGGACTTGCTGAACATCTTGAGTGGCAGAACTGTCGAAAACGGAAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV525729       --> AGAGGGACTTGCTGAACATCTTGAGTGGCAGAACTGTCGAAAACGGAAAT  Raphanus raphanistrum subsp. maritimus
EW717096       --> AGAGGGACTTGCTCAACATCTTGAGTGGCAGAACTGTCGAAAACGGAAAT  Raphanus sativus var. oleiformis
FD938942       --> AGAGGGACTTGCTCAACATCTTGAGTGGCAGAACTGTCGAAAACGGAAAT  Raphanus sativus var. oleiformis
FD550383       --> AGAGGGACTTGCTGAACATCTTGAGTGGCAGAACTGTCGAAAACGGAAAT  Raphanus raphanistrum subsp. raphanistrum (NY)

               551    -    601
UN14518        --> GAGCAGCAAG-GGAGACAGTTG-CGGAGGAGAATACAAATAAGAAAGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547568       <-- GAGCAGCAA---GAGACAGTTG-CGGAGGAGAATACAAATAAGAAAGTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX753936       <-- GAGCAGCAA---GAGACAGTTG-CGGAGGAGAATACAAATAAGAAAGTCT  Raphanus raphanistrum subsp. maritimus
FD546351       <-- GAGCAGCAA---GAGACAGTTG-CGGAGGAGAATACAAATAAGAAAGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901521       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW721088       <-- ..................................................  Raphanus sativus var. oleiformis
FD937797       --> GAGCAGCAAGAGGAGACAGTTG-CGGAGGAGAATACAAATAAGAAAGTCT  Raphanus sativus var. oleiformis
EW722597       --> GAGCAGCAAGCGGAGACAGTTG-CGGAGGAGAATACAAATAAGAAAGTCT  Raphanus sativus cv Early Scarlet Globe
EX897829       --> GAGCAGCAAGCGGAGACAGTTGGGGGAGGAGAATACAAATAAGAAAGTCT  Raphanus sativus cv Early Scarlet Globe
EX888169       --> GAGCAGCAAGAGGAGACAGTTG-CGGAGGAGAATACAAATAAGAAAGTCT  Raphanus sativus var. oleiformis
FD551728       --> GAGCAGCAAG---AGACAGTTG-CGGAGGAGAATACAAATAAGAAAGTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV525729       --> GAGCAGCAAG---AGACAGTTG-CGGAGGAGAATACAAATAAGAAAGTCT  Raphanus raphanistrum subsp. maritimus
EW717096       --> GAGCAGCAAGAGGAGACAGTTG-CGGAGGAGAATACAAATAAGAAAGTCT  Raphanus sativus var. oleiformis
FD938942       --> GAGCAGCAAGAGGAGACAGTTG-CGGAGGAGAATACAAATAAGAAAGTCT  Raphanus sativus var. oleiformis
FD550383       --> GAGCAGCAAG---AGACAGTTG-CGGAGGAGAATACAAATAAGAAAGTCT  Raphanus raphanistrum subsp. raphanistrum (NY)

               601    -    651
UN14518        --> CTTCTACTTCTTCACCTGCTGCTACACCTGTTGAAAAGCCTGAAGAAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547568       <-- CTTCTACTTCTTCACCTGCTGCTACACCTGTTGAAAAGCCTAAAGAAGCT
EX753936       <-- CTTCTACTTCTTCACCTGCTGCTACACCTGTTGAAAAGCCTGAAGAAGCT
FD546351       <-- CTTCTACTTCTTCACCTGCTGCTACACCTGTTGAAAAGCCTGAAGAAGCT
EX901521       <-- .tttTACTTCTTCACCTGCTGCTACACCTGTTGAAAAGCCTGAAGAAGCT
EW721088       <-- .....ACTTCTTCACCTGCTGCTACACCTGTTGAAAAGCCTGAAGAAGCT
FD937797       --> CTTCTACTTCTTCACCTGCTGCTACACCTGTTGAAAAGCCTGAAGAAGCT
EW722597       --> CTTCTACTTCTTCACCTGCTGCTACACCTGTTGAAAAGCCTGAAGAAGCT
EX897829       --> CTTCTACTTCTTCACCTGCTGCTACACCTGTTGAAA-GCCTGAAGAAGCT
EX888169       --> CTTCTACTTCTTCACCTGCTGCTACACCTGTTGAAAAGCCTGAAGAAGCT
FD551728       --> CTTCTACTTCTTCACCTGCTGCTACACCTGTTGAAAAGCCTAAAGAAGCT
EV525729       --> CTTCTACTTCTTCACCTGCTGCTACACCTGTTGAAAAGCCTGAATAAGCT
EW717096       --> CTTCTACTTCTTCACCTGCTGCTACACCTGTTGAAAAGCCTGAAGAAGCT
FD938942       --> CTTCTACTTCTTCACCTGCTGCTACACCTGTTGAAAAGCCTGAAGAAGCT
FD550383       --> CTTCTACTTCTTCACCTGCTGCTACACCTGTTGAAAAGCCTGAAGAAGCT

               651    -    701
UN14518        --> CCTGAGGCAGGGACTAATAATAACAATCATAATACTCCAGCAGAAGTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547568       <-- CCTGAGGCAGGGACTAATAATAACAATCATAATACCCCAGCAGAAGTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX753936       <-- CCTGAGGCAGGGACTAATAATAACAATCATAATACCCCAGCAGAAGTTGA  Raphanus raphanistrum subsp. maritimus
FD546351       <-- TCTGAGGCAGGGACTAATAATAACAATCATAATACCCCAGCAGAAGTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901521       <-- CCTGAGGCAGGGACTAATAATAACAATCATAATACTCCAGCAGAAGTTGA  Raphanus sativus cv Early Scarlet Globe
EW721088       <-- CCTGAGGCAGGGACTAATAATAACAATCATAATACTCCAGCAGAAGTTGA  Raphanus sativus var. oleiformis
FD937797       --> CCTGAGGCAGG-ACTAATAATAACAATCATAATACTCCAGCAGAAGTTGA  Raphanus sativus var. oleiformis
EW722597       --> CCTGAGGCAGGGACTAATAATAACAATCATAATACTCCAGCAGAAGTTGA  Raphanus sativus cv Early Scarlet Globe
EX897829       --> CCTGAGGCAGG-ACTAATAATAACA-TCATAATACTCCAGCAGAAGT...  Raphanus sativus cv Early Scarlet Globe
EX888169       --> CCTGAGGCAGGGACTAATAATAACAATCATAATACTCCAGCAGAAGTTGA  Raphanus sativus var. oleiformis
FD551728       --> CCTGAGGCAGG-ACTAATAATAACAATCATAATACCCCAGCAGAAGTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV525729       --> CCTGAGGCAGGGACTAATAATAACAATCATAATACCCCAGCAGAAGTTGA  Raphanus raphanistrum subsp. maritimus
EW717096       --> CCTGAGGCAGG-ACTAATAATAACAATCATAATACTCCAGCAGAAGTTGA  Raphanus sativus var. oleiformis
FD938942       --> CCTGA.............................................  Raphanus sativus var. oleiformis
FD550383       --> TCTGAGGCAGGGACTAATAATAACAATCATAATACCCCAGCA........  Raphanus raphanistrum subsp. raphanistrum (NY)

               701    -    751
UN14518        --> GCAGGAGAGAAGTGAATCAGAAGATTCTGATGATTCTATGTGAAAGGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547568       <-- GCAGGAGAGAAGTGAATCAGAAGATTCTGATGATTCTATGTGAAAGGTTG
EX753936       <-- GCAGGAGAGAAGTGAATCAGAAGATTCTGATGATTCTATGTGAAAGGTTG
FD546351       <-- GCAGGAGAGAAGTGAATCAGAAGATTCTGATGATTCTATGTGAAAGGTTG
EX901521       <-- GCAGGAGGGAAGTGAATCAGAAGATTCTGATGATTCTATGTGAAAGGTTG
EW721088       <-- GCAGGAGAGAAGTGAATCAGAAGATTCTGATGATTCTATGTGAAAGGTTG
FD937797       --> GCAG-AGAGAAGTGAATCAGAAGATTCTGATGATTCTATGTGAAAGGT-G
EW722597       --> GC................................................
EX897829       --> ..................................................
EX888169       --> ..................................................
FD551728       --> GCAGGAGAGAAGTGAATCAGAAGATTCTGATGAT-CTATGTGAAAGGT-G
EV525729       --> GCAGGAGAGAAGTGAATCAGAAGATTCTGATGATTCTATGTGA.......
EW717096       --> ..................................................
FD938942       --> ..................................................
FD550383       --> ..................................................

               751    -    801
UN14518        --> GTTAT-GTATGTATCACGTTTGAAGAAACGAATGCAGCTATGTTTACCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547568       <-- GTTAT-GTATGTATCACGTTTGAAGAAACGAATGCAGCTATGTTTACCAC
EX753936       <-- GTTAT-GTATGTATCACGTTTGAAGAAACGAATGCAGCTATGTTTACCAC
FD546351       <-- GTTAT-GTATGTATCACGTTTGAAGAAACGAATGCAGCTATGTTTACCAC
EX901521       <-- GTTAT-GTATGTATCACGTTTGAAGAAACGAATGCAGCTATGTTTACCAC
EW721088       <-- GTTATTGTATG--TGACGTTTGAAGAAATGAATGCAGCTATGTTTACC..
FD937797       --> G-TAT-GTATGTgacgtttgaga...........................
EW722597       --> ..................................................
EX897829       --> ..................................................
EX888169       --> ..................................................
FD551728       --> GTTAT-GTATGTATCACGTTTGAAGAAACGAATGCAGCTATGTTTAC-AC
EV525729       --> ..................................................
EW717096       --> ..................................................
FD938942       --> ..................................................
FD550383       --> ..................................................

               801    -    851
UN14518        --> TTTTATCATTTATTGGTTCGTGGTCAGGAAGAGTAGAGCGTTACGATCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD547568       <-- TTTTATCATTTATTGGTTCGTGGTCAGGAAGAGTAGAGCGTTACGATCTG
EX753936       <-- TTTTATCATTTATTGGTTCGTGGTCAGGAAGAGTAGAGCGTTACGATCTG
FD546351       <-- TTTTATCATTTATTGGTTCGTGGTCAGGAAGAGTAGAGCGTTACGATCTG
EX901521       <-- TTTTATCATTTATTGGTTCGTGGTCAGGAAGAGTAGAGCGTTACGATCTG
EW721088       <-- ..................................................
FD937797       --> ..................................................
EW722597       --> ..................................................
EX897829       --> ..................................................
EX888169       --> ..................................................
FD551728       --> TTT...............................................
EV525729       --> ..................................................
EW717096       --> ..................................................
FD938942       --> ..................................................
FD550383       --> ..................................................

               851    -    901
UN14518        --> GTA
                   ~~~
FD547568       <-- Gc.
EX753936       <-- GTA
FD546351       <-- GTA
EX901521       <-- GTA
EW721088       <-- ...
FD937797       --> ...
EW722597       --> ...
EX897829       --> ...
EX888169       --> ...
FD551728       --> ...
EV525729       --> ...
EW717096       --> ...
FD938942       --> ...
FD550383       --> ...