1      -     51
UN14524        --> GGAAGCTCATCATCTCTCTATCCTCCCACCCTAAGAACTTTCGAAATCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY437799       <-- ..................................................
FD546059       <-- ..................................................
FD985979       <-- ..................................................
EX751333       <-- ..................................................
EY895148       <-- ..................................................
EY945456       <-- ..................................................
EV572452       <-- ..................................................
EX750651       <-- ..................................................
EV543780       <-- ..................................................
EV567529       --> GGAAGCTCATCATCTCTCTATCCTCCCACCCTAAGAACTTTCGAAATCCT
EY950070       --> .................CTATCCTCCCACCCTAAGAACTTTCGAAATCCT
EX746183       --> ..................gATCCTCCCACCCTAAGAACTTTCGAAATCCT
FY435598       --> .........................CCACCCTAAGAA-TTTCGAAATCCT
EY899353       --> .........................ggACCCTAAGAACTTTCGAAATCCT
FD550066       --> .............................ggaAAGAACTTTCGAAATCCT
HS106817       --> ..........................gcacgaggGAACTTTCTTAATCCT
FY433268       --> .....................................CTTTCGAAA-CCT
FY434567       --> .....................................CTTTCGAAA-CCT
FY439567       --> ...............................................CCT
EY931650       --> .................................................g
FY434862       --> ..................................................
FY436153       --> ..................................................
FY439544       --> ..................................................
FY439628       --> ..................................................
FY435678       --> ..................................................
FY437360       --> ..................................................
EY916724       --> ..................................................
EY917017       --> ..................................................
FD965638       --> ..................................................
EV548022       --> ..................................................
FY439203       --> ..................................................
FY434972       --> ..................................................

               51     -    101
UN14524        --> AAGAGCCATGTCGCTCACGATCCCGACGAACCTCGTCCTCAACAAGTCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY437799       <-- ..GAGCCATGTCGCTCACGATCCCGACGAACCTCGTCCTCAACAAGTCAC
FD546059       <-- ..................................................
FD985979       <-- ..................................................
EX751333       <-- ..................................................
EY895148       <-- ..................................................
EY945456       <-- ..................................................
EV572452       <-- ..................................................
EX750651       <-- ..................................................
EV543780       <-- ..................................................
EV567529       --> AAGAGCCATGTCGCTCACGATCCCGACGAACCTCGTCCTCAACAAGTCAC
EY950070       --> AAGAGCCATGTCGCTCACGATCCCGACGAACCTCGTCCTCAACAAGTCAC
EX746183       --> AAGAGCCATGTCGCTCACGATCCCGACGAACCTCGTCCTCAACAAGTCAC
FY435598       --> AAGAGCCATGTCGCTCACGATCCCGACGAACCTCGTCCTCAACAAGTCAC
EY899353       --> AAGAGCCATGTCGCTCACGATCCCGACGAACCTCGTCCTCAACAAGTCAC
FD550066       --> AAGAGCCATGTCGCTCACGATCCCGACGAACCTCGTCCTCAACAAGTCTC
HS106817       --> AAGAGCCATGTCGCTCACGATCCCGACGAACCTCGTCCTCAACAAGTCAC
FY433268       --> AAGAGCCATGTCGCTCACGATCCCGACGAACCTCGTCCTCAACAAGTCAC
FY434567       --> AAGAGCCATGTCGCTCACGATCCCGACGAACCTCGTCCTCAACAAGTCAC
FY439567       --> AAGAGCCATGTCGCTCACGATCCCGACGAACCTCGTCCTCAACAAGTCAC
EY931650       --> AAGAGCCATGTCGCTCACGATCCCGACGAACCTCGTCCTCAACAAGTCAC
FY434862       --> .AGAGC-ATGTCGCTCACGATCCCGACGAACCTCGTCCTCAACAAGTCAC
FY436153       --> ......CATGTCGCTCACGATCCCGACGAACCTCGTCCTCAACAAGTCAC
FY439544       --> ........................GACGAACCTCGTCCTCAACAAGTCAC
FY439628       --> .................................................C
FY435678       --> ..................................................
FY437360       --> ..................................................
EY916724       --> ..................................................
EY917017       --> ..................................................
FD965638       --> ..................................................
EV548022       --> ..................................................
FY439203       --> ..................................................
FY434972       --> ..................................................

               101    -    151
UN14524        --> TCACCCAATCCGTACCTAAATCCACCGCGAGATTCGTCTGCTCCGATGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY437799       <-- TCACCCAATCCGTACCTAAATCCACCGCGAGATTCGTCTGCTCCGATGAC
FD546059       <-- .....................CCACCGCGAGATTCGTCTACTCCGATGAC
FD985979       <-- .....................CCACCGCGAGATTCGTCTGCTCCGATGAC
EX751333       <-- ..................................................
EY895148       <-- ..................................................
EY945456       <-- ..................................................
EV572452       <-- ..................................................
EX750651       <-- ..................................................
EV543780       <-- ..................................................
EV567529       --> TCACCCAATCCGTACCTAAATCCACCGCGAGATTCGTCTGCTCCGATGAC
EY950070       --> TCACCCAATCCGTACCTAAATCCACCGCGAGATTCGTCTGCTCCGATGAC
EX746183       --> TCACCCAATCCGTACCTAAATCCACCGCGAGATTCGTCTGCTCCAATGAC
FY435598       --> TCACCCAATCCGTACCTAAATCCACCGCGAGATTCGTCTGCTCCGATGAC
EY899353       --> TCACCCAATCCGTACCTAAATCCACCGCGAGATTCGTCTGCTCCGATGAC
FD550066       --> CCACCCAATCCGTACCTAAATCCACCGCGAGATTCGTCTACTCCGATGAC
HS106817       --> TCACCCAATCCGTACCTAAATCCACCGCGAGATTCGTCTGCTCCGATGAC
FY433268       --> TCACCCAATCCGTACCTAAATCCACCGCGAGATTCGTCTGCTCCGATGAC
FY434567       --> TCACCCAATCCGTACCTAAATCCACCGCGAGATTCGTCTGCTCCGATGAC
FY439567       --> TCACCCAATCCGTACCTAAATCCACCGCGAGATTCGTCTGCTCCGATGAC
EY931650       --> TCACCCAATCCGTACCTAAATCCACCGCGAGATTCGTCTGCTCCGATGAC
FY434862       --> TCACCCAATCCGTACCTAAATCCACCGCGAGATTCGTCTGCTCCGATGAC
FY436153       --> TCACCCAATCCGTACCTAAATCCACCGCGAGATTCGTCTGCTCCGATGAC
FY439544       --> TCACCCAATCCGTACCTAAATCCACCGCGAGATTCGTCTGCTCCGATGAC
FY439628       --> TCACCCAATCCGTACCTAAATCCACCGCGAGATTCGTCTGCTCCGATGAC
FY435678       --> ..................................CGTCTGCTCCGATGAC
FY437360       --> ..................................................
EY916724       --> ..................................................
EY917017       --> ..................................................
FD965638       --> ..................................................
EV548022       --> ..................................................
FY439203       --> ..................................................
FY434972       --> ..................................................

               151    -    201
UN14524        --> AAATCCGCAACGCCGCAGCAACAGCAGTCCATGAAGGCTCTCTCGGCGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY437799       <-- AAATCCGCAACGCCGCAGCAACAGCAGTCCATGAAGGCTCTCTCGGCGGC  Raphanus sativus cv GSK3-1
FD546059       <-- AAATCCGCAACGCCGCAGCAACAGCAGTCCATGAAGGCTTTCTCCGCGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD985979       <-- AAATCCGCAACGCCGCAGCAACAGCAGTCCATGAAGGCTTTCTCCGCGGC  Raphanus raphanistrum subsp. landra
EX751333       <-- .....CGCAACGCCGCAGCAACAGCAGTCCATGAAGGCTTTCTCCGCGGC  Raphanus raphanistrum subsp. maritimus
EY895148       <-- ............CCGCAGCAACAGCAGTCCATGAAGGCTTTCTCCGCGGC  Raphanus raphanistrum subsp. maritimus
EY945456       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV572452       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX750651       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV543780       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV567529       --> AAATCCGCAACGCCTCAGCAACAGCAGTCCATGAAGGCTTTCTCCGCGGC  Raphanus raphanistrum subsp. landra
EY950070       --> AAATCCGCAACGCCGCAGCAACAGCAGTCCATGAAGGCTCTCTCGGCGGC  Raphanus sativus cv Rat-Tail Radish #3870
EX746183       --> AAATCCGCAACGCCGCAGCAACAGCAGTCCATGAAGGCTTTCTCCGCGGC  Raphanus raphanistrum subsp. maritimus
FY435598       --> AAATCCGCAACGCCGCAGCAACAGCAGTCCATGAAGGCTCTCTCGGCGGC  Raphanus sativus cv GSK3-1
EY899353       --> AAATCCGCAACGCCGCAGCAACAGCAGTCCATGAAGGCTTTCTCCGCGGC  Raphanus raphanistrum subsp. maritimus
FD550066       --> AAATCCGCAACGCCGCAGCAACAGCAGTCCATGAAGGCTTTCTCCGCGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
HS106817       --> AAATCCGCAACGCCGCAGCAACAGCAGTCCATGAAGGCTCTCTCGGCGGC  Raphanus sativus var. niger
FY433268       --> AAATCCGCAACGCCGCAGCAACAGCAGTCCATGAAGGCTCTCTCGGCGGC  Raphanus sativus cv GSK3-1
FY434567       --> AAATCCGCAACGCCGCAGCAACAGCAGTCCATGAAGGCTCTCTCGGCGGC  Raphanus sativus cv GSK3-1
FY439567       --> AAATCCGCAACGCCGCAGCAACAGCAGTCCATGAAGGCTCTCTCGGCGGC  Raphanus sativus cv GSK3-1
EY931650       --> AAATCCGCAACGCCGCAGCAACAGCAGTCCATGAAGGCTTTCTCCGCGGC  Raphanus sativus var. oleiformis
FY434862       --> AAATCCGCAACGCCGCAGCAACAGCAGTCCATGAAGGCTCTCTCGGCGGC  Raphanus sativus cv GSK3-1
FY436153       --> AAATCCGCAACGCCGCAGCAACAGCAGTCCATGAAGGCTCTCTCGGCGGC  Raphanus sativus cv GSK3-1
FY439544       --> AAATCCGCAACGCCGCAGCAACAGCAGTCCATGAAGGCTCTCTCGGCGGC  Raphanus sativus cv GSK3-1
FY439628       --> AAATCCGCAACGCCGCATCAACAACAGTCCATGAAGGCTCTCTCGGCGGC  Raphanus sativus cv GSK3-1
FY435678       --> AAATCCGCAACGCCGCAGCAACAGCAGTCCATGAAGGCTCTCTCGGCGGC  Raphanus sativus cv GSK3-1
FY437360       --> ..................................................  Raphanus sativus cv GSK3-1
EY916724       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY917017       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD965638       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV548022       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY439203       --> ..................................................  Raphanus sativus cv GSK3-1
FY434972       --> ..................................................  Raphanus sativus cv GSK3-1

               201    -    251
UN14524        --> GGTAGCTCTCTCTTCCATCCTCCTCTCAGCTCCGATGCCAGCCGTCGCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY437799       <-- GGTAGCTCTCTCTTCCATCCTCCTCTCAGCTCCGATGCCAGCCGTCGCCG  Raphanus sativus cv GSK3-1
FD546059       <-- CGTAGCTCTCTCTTCCATCCTCCTCTCAGCTCCGATGCCAGCCGTCGCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD985979       <-- CGTAGCTCTCTCTTCCATCCTCCTCTCAGCTCCGATGCCAGCCGTCGCCG  Raphanus raphanistrum subsp. landra
EX751333       <-- CGTAGCTCTCTCTTCCATCCTCCTCTCAGCTCCGATGCCAGCCGTCGCCG  Raphanus raphanistrum subsp. maritimus
EY895148       <-- CGTAGCTCTCTCTTCCATCCTCCTCTCAGCTCCGATGCCAGCCGTCGCCG  Raphanus raphanistrum subsp. maritimus
EY945456       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV572452       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX750651       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV543780       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV567529       --> CGTAGCTCTCTCTTCCATCCTCCTCTCAGCTCCGATGCCAGCCGTCGCCG  Raphanus raphanistrum subsp. landra
EY950070       --> GGTAGCTCTCTCTTCCATCCTCCTCTCAGCTCCGATGCCAGCCGTCGCCG  Raphanus sativus cv Rat-Tail Radish #3870
EX746183       --> CGTAGCTCTCTCTTCCATCCTCCTCTCAGCTCCGATGCCAGCCGTCGCCG  Raphanus raphanistrum subsp. maritimus
FY435598       --> GGTAGCTCTCTCTTCCATCCTCCTCTCAGCTCCGATGCCAGCCGTCGCCG  Raphanus sativus cv GSK3-1
EY899353       --> CGTAGCTCTCTCTTCCATCCTCCTCTCAGCTCCGATGCCAGCCGTCGCCG  Raphanus raphanistrum subsp. maritimus
FD550066       --> CGTAGCTCTCTCTTCCATCCTCCTCTCAGCTCCGATGCCAGCCGTCGCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
HS106817       --> GGTAGCTCTCTCTTCCATCCTCCTCTCAGCTCCGATGCCAGCCGTCGCCG  Raphanus sativus var. niger
FY433268       --> GGTAGCTCTCTCTTCCATCCTCCTCTCAGCTCCGATGCCAGCCGTCGCCG  Raphanus sativus cv GSK3-1
FY434567       --> GGTAGCTCTCTCTTCCATCCTCCTCTCAGCTCCGATGCCAGCCGTCGCCG  Raphanus sativus cv GSK3-1
FY439567       --> GGTAGCTCTCTCTTCCATCCTCCTCTCAGCTCCGATGCCAGCCGTCGCCG  Raphanus sativus cv GSK3-1
EY931650       --> CGTAGCTCTCTCTTCCATCCTCCTCTCAGCTCCGATGCCAGCCGCCGCTG  Raphanus sativus var. oleiformis
FY434862       --> GGTAGCTCTCTCTTCCATCCTCCTCTCAGCTCCGATGCCAGCCGTCGCCG  Raphanus sativus cv GSK3-1
FY436153       --> GGTAGCTCTCTCTTCCATCCTCCTCTCAGCTCCGATGCCAGCCGTCGCCG  Raphanus sativus cv GSK3-1
FY439544       --> GGTAGCTCTCTCTTCCATCCTCCTCTCAGCTCCGATGCCAGCCGTCGCCG  Raphanus sativus cv GSK3-1
FY439628       --> GGTAGCTCTCTCTTCCATCCACCTCTCAGCTCCGATGCCATCCGTCGACG  Raphanus sativus cv GSK3-1
FY435678       --> GGTAGCTCTCTCTTCCATCCTCCTCTCAGCTCCGATGCCAGCCGTCGCCG  Raphanus sativus cv GSK3-1
FY437360       --> ...AGCTCTCTCTTC-ATCCTCCTCTCAGCTCCGATGCCAGCCGTCGCCG  Raphanus sativus cv GSK3-1
EY916724       --> .....................gCTCTCAGCTCCGATGCCAGCCGTCGCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY917017       --> .....................gCTCTCAGCTCCGATGCCAGCCGTCGCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD965638       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV548022       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY439203       --> ..................................................  Raphanus sativus cv GSK3-1
FY434972       --> ..................................................  Raphanus sativus cv GSK3-1

               251    -    301
UN14524        --> ATATCTCGGGCTTAACCCCTTGCAAGGAGTCGAAACAGTTCGCCAAGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY437799       <-- ATATCTCGGGCTTAACCCCTTGCAAGGAGTCGAAACAGTTCGCCAAGAGG
FD546059       <-- ATATCTCGGGCTTAACCCCTTGCAAGGAGTCGAAACAGTTCGCCAAGAGG
FD985979       <-- ATATCTCGGGCTTAACCCCTTGCAAGGAGTCGAAACAGTTCGCCAAGAGG
EX751333       <-- ATATCTCGGGCTTAACCCCTTGCAAGGAGTCGAAACAGTTCGCCAAGAGG
EY895148       <-- ATATCTCGGGCTTAACCCCTTGCAAGGAGTCGAAACAGTTCGCCAAGAGG
EY945456       <-- ..................................................
EV572452       <-- ..................................................
EX750651       <-- ..................................................
EV543780       <-- ..................................................
EV567529       --> ATATCTCGGGCTTAACCCCTTGCAAGGAGTCGAAACAGTTCGCCAAGAGG
EY950070       --> ATATCTCGGGCTTAACCCCTTGCAAGGAGTCTAAACAGTTCGCCAAGAGG
EX746183       --> ATATCTCGGGCTTAACCCCTTGCAAGGAGTCGAAACAGTTCGCCAAGAGG
FY435598       --> ATATCTCGGGCTTAACCCCTTGCAAGGAGTCGAAACAGTTCGCCAAGAGG
EY899353       --> ATATCTCGGGCTTAACCCCTTGCAAGGAGTCGAAACAGTTCGCCAAGAGG
FD550066       --> ATATCTCGGGCTTAACCCCTTGCAAGGAGTCGAAACAGTTCGCCAAGAGG
HS106817       --> ATATCTCGGGCTTAACCCCTTGCAAGGAGTCGAAACAGTTCGCCAAGAGG
FY433268       --> ATATCTCGGGCTTAACCCCTTGCAAGGAGTCGAAACAGTTCGCCAAGAGG
FY434567       --> ATATCTCGGGCTTAACCCCTTGCAAGGAGTCGAAACAGTTCGCCAAGAGG
FY439567       --> ATATCTCGGGCTTAACCCCTTGCAAGGAGTCGAAACAGTTCGCCAAGAGG
EY931650       --> ATATCTCGGGCTTAACCCCTTGCAAGGAGTCGAAACAGTTCGCCAAGAGG
FY434862       --> ATATCTCGGGCTTAACCCCTTGCAAGGAGTCGAAACAGTTCGCCAAGAGG
FY436153       --> ATATCTCGGGCTTAACCCCTTGCAAGGAGTCGAAACAGTTCGCCAAGAGG
FY439544       --> ATATCTCGGGCTTAACCCCTTGCAAGGAGTCGAAACAGTTCGCCAAGAGG
FY439628       --> ATATCTCGGGCTTAACCCCTTGCAAGGAGTCAAAACAGTTCGCCAAGAGG
FY435678       --> ATATCTCGGGCTTAACCCCTTGCAAGGAGTCGAAACAGTTCGCCAAGAGG
FY437360       --> ATATCTCGGGCTTAACCCCTTGCAAGGAGTCGAAACAGTTCGCCAAGAGG
EY916724       --> ATATCTCGGGCTTAACCCCTTGCAAGGAGTCGAAACAGTTCGCCAAGATG
EY917017       --> ATATCTCGGGCTTAACCCCTTGCAAGGAGTCGAAACAGTTCGCCAAGATG
FD965638       --> ..................................................
EV548022       --> ..................................................
FY439203       --> ..................................................
FY434972       --> ..................................................

               301    -    351
UN14524        --> GAGAAGCAACAGATCAAGAAGCTCGAATCATCTCTTAAGCTCTACGCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY437799       <-- GAGAAGCAACAGATCAAGAAGCTCGAATCATCTCTTAAGCTCTACGCTCC
FD546059       <-- GAGAAGCAACAGATCAAGAAGCTCGAATCATCTCTTAAGCTCTACGCTCC
FD985979       <-- GAGAAGCAACAGATCAAGAAGCTCGAATCATCTCTTAAGCTCTACGCTCC
EX751333       <-- GAGAAGCAACAGATCAAGAAGCTCGAATCATCTCTTAAGCTCTACGCTCC
EY895148       <-- GAGAAGCAACAGATCAAGAAGCTCGAATCATCTCTTAAGCTCTACGCTCC
EY945456       <-- ..................................................
EV572452       <-- ..................................................
EX750651       <-- ..................................................
EV543780       <-- ..................................................
EV567529       --> GAGAAGCAACAGATCAAGAAGCTCGAATCATCTCTTAAGCTCTACGCTCC
EY950070       --> GAGAAGCAACAGATCAAGAAGCTCGAATCATCTCTTAAGCTCTACGCTCC
EX746183       --> GAGAAGCAACAGATCAAGAAGCTCGAATCATCTCTTAAGCTCTACGCTCC
FY435598       --> GAGAAGCAACAGATCAAGAAGCTCGAATCATCTCTTAAGCTCTACGCTCC
EY899353       --> GAGAAGCAACAGATCAAGAAGCTCGAATCATCTCTTAAGCTCTACGCTCC
FD550066       --> GAGAAGCAACAGATCAAGAAGCTCGAATCATCTCTTAAGCTCTACGCTCC
HS106817       --> GAGAAGCAACAGATCAAGAAGCTCGAATCATCTCTTAAGCTCTACGCTCC
FY433268       --> GAGAAGCAACAGATCAAGAAGCTCGAATCATCTCTTAAGCTCTACGCTCC
FY434567       --> GAGAAGCAACAGATCAAGAAGCTCGAATCATCTCTTAAGCTCTACGCTCC
FY439567       --> GAGAAGCAACAGATCAAGAAGCTCGAATCATCTCTTAAGCTCTACGCTCC
EY931650       --> GAGAAGCAACAGATCAAGAAGCTCGAATCATCTCTTAAGCTCTACGCTCC
FY434862       --> GAGAAGCAACAGATCAAGAAGCTCGAATCATCTCTTAAGCTCTACGCTCC
FY436153       --> GAGAAGCAACAGATCAAGAAGCTCGAATCATCTCTTAAGCTCTACGCTCC
FY439544       --> GAGAAGCAACAGATCAAGAAGCTCGAATCATCTCTTAAGCTCTACGCTCC
FY439628       --> GAGAAGCAACAGATCAAGAAGCTCAAATCATCTCTTAAGCTCAACGCTCC
FY435678       --> GAGAAGCAACAGATCAAGAAGCTCGAATCATCTCTTAAGCTCTACGCTCC
FY437360       --> GAGAAGCAACAGATCAAGAAGCTCGAATCATCTCTTAAGCTCTACGCTCC
EY916724       --> GAGAAGCAACAGATCAAGAAGCTCGAATCATCTCTTAAGCTCTACGCTCC
EY917017       --> GAGAAGCAACAGATCAAGAAGCTCGAATCATCTCTTAAGCTCTACGCTCC
FD965638       --> .............gCAAGAAGCTCGAATCATCTCTTAAGCTCTACGCTCC
EV548022       --> ................AGAAGCTCGAATCATCTCTTAAGCTCTACGCTCC
FY439203       --> ..................................................
FY434972       --> ..................................................

               351    -    401
UN14524        --> TGAGAGCGCCCCTGCTCTTGCTCTTAACGCTCAGATCGAGAAGACCAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY437799       <-- TGAGAGCGCCCCCGCTCTTGCTCTTAACGCTCAGATCGAGAAGACCAAGC
FD546059       <-- TGAGAGCGCCCCTGCTCTTGCTCTTAACGCTCAGATCGAGAAGACCAAGC
FD985979       <-- TGAGAGCGCCCCTGCTCTTGCTCTTAACGCTCAGATCGAGAAGACCAAGC
EX751333       <-- TGAGAGCGCCCCTGCTCTTGCTCTTAACGCTCAGATCGAGAAGACCAAGC
EY895148       <-- TGAGAGCGCCCCTGCTCTTGCTCTTAACGCTCAGATCGAGAAGACCAAGC
EY945456       <-- ..................TGCTCTTAACGCTCAGATCGAGAAGACCAAGC
EV572452       <-- ..................................................
EX750651       <-- ..................................................
EV543780       <-- ..................................................
EV567529       --> TGAGAGCGCCCCTGCTCTTGCTCTTAACGCTCAGATCGAGAAGACCAAGC
EY950070       --> TGAGAGCGCCCCTGCTCTTGCTCTTAACGCTCAGATCGAGAAGACCAAGC
EX746183       --> TGAGAGCGCCCCTGCTCTTGCTCTTAACGCTCAGATCGAGAAGACCAAGC
FY435598       --> TGAGAGCGCCCCTGCTCTTGCTCTTAACGCTCAGATCGAGAAGACCAAGC
EY899353       --> TGAGAGCGCCCCTGCTCTTGCTCTTAACGCTCAGATCGAGAAGACCAAGC
FD550066       --> TGAGAGCGCCCCTGCTCTTGCTCTTAACGCTCAGATCGAGAAGACCAAGC
HS106817       --> TGAGAGCGCCCCTGCTCTTGCTCTTAACGCTCAGATCGAGAAGACCAAGC
FY433268       --> TGAGAGCGCCCCTGCTCTTGCTCTTAACGCTCAGATCGAGAAGACCAAGC
FY434567       --> TGAGAGCGCCCCTGCTCTTGCTCTTAACGCTCAGATCGAGAAGACCAAGC
FY439567       --> TGAGAGCGCCCCTGCTCTTGCTCTTAACGCTCAGATCGAGAAGACCAAGC
EY931650       --> TGAGAGCGCCCCTGCTCTTGCTCTTAACGCTCAGATCGAGAAGACCAAGC
FY434862       --> TGAGAGCGCCCCTGCTCTTGCTCTTAACGCTCAGATCGAGAAGACCAAGC
FY436153       --> TGAGAGCGCCCCTGCTCTTGCTCTTAACGCTCAGATCGAGAAGACCAAGC
FY439544       --> TGAGAGCGCCCCTGCTCTTGCTCTTAACGCTCAGATCGAGAAGACCAAGC
FY439628       --> TGAAAGCGCCCCTGCTCTTGCTCTTAACGCTCAGATCGAGAAGACCAAGC
FY435678       --> TGAGAGCGCCCCTGCTCTTGCTCTTAACGCTCAGATCGAGAAGACCAAGC
FY437360       --> TGAGAGCGCCCCTGCTCTTGCTCTTAACGCTCAGATCGAGAAGACCAAGC
EY916724       --> TGAGAGCGCCCCTGCTCTTGCTCTTAACGCTCAGATCGAGAAGACCAAGC
EY917017       --> TGAGAGCGCCCCTGCTCTTGCTCTTAACGCTCAGATCGAGAAGACCAAGC
FD965638       --> TGAGAGCGCCCCTGCTCTTGCTCTTAACGCTCAGATCGAGAAGACCAAGC
EV548022       --> TGAGAGCGCCCCTGCTCTTGCTCTTAACGCTCAGATCGAGAAGACCAAGC
FY439203       --> .........................AACGCTCAGATCGAGAAGCCCAAGC
FY434972       --> ..................................................

               401    -    451
UN14524        --> GCAGGTTCGACAACTACGGCAAGTACGGGCTCCTCTGCGGGGCAGACGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY437799       <-- GCAGGTTCGACAACTACGGCAAGTACGGGCTCCTCTGCGGGGCAGACGGG  Raphanus sativus cv GSK3-1
FD546059       <-- GCAGGTTTGACAACTACGGCAAGTACGGGCTCCTCTGCGGTGCAGACGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD985979       <-- GCAGGTTTGACAACTACGGCAAGTACGGGCTCCTCTGCGGTGCAGACGGG  Raphanus raphanistrum subsp. landra
EX751333       <-- GCAGGTTTGACAACTACGGCAAGTACGGGCTCCTCTGCGGTGCAGACGGG  Raphanus raphanistrum subsp. maritimus
EY895148       <-- GCAGGTTTGACAACTACGGCAAGTACGGGCTCCTCTGCGGTGCAGACGGG  Raphanus raphanistrum subsp. maritimus
EY945456       <-- GCAGGTTCGACAACTACGGCAAGTACGGGCTCCTCTGCGGGGCAGACGGG  Raphanus sativus cv Rat-Tail Radish #3870
EV572452       <-- ............................................GACGGG  Raphanus raphanistrum subsp. landra
EX750651       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV543780       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV567529       --> GCAGGTTTGACAACTACGGCAAGTACGGGCTCCTCTGCGGTGCAGACGGG  Raphanus raphanistrum subsp. landra
EY950070       --> GCAGGTTCGACAACTACGGCAAGTACGGGCTCCTCTGCGGGGCAGACGGG  Raphanus sativus cv Rat-Tail Radish #3870
EX746183       --> GCAGGTTTGACAACTACGACAAGTACGGGCTCCTCTGCGGTGCAGACGGG  Raphanus raphanistrum subsp. maritimus
FY435598       --> GCAGGTTCGACAACTACGGCAAGTACGGGCTCCTCTGCGGGGCAGACGGG  Raphanus sativus cv GSK3-1
EY899353       --> GCAGGTTTGACAACTACGGCAAGTACGGGCTCCTCTGCGGTGCAGACGGG  Raphanus raphanistrum subsp. maritimus
FD550066       --> GCAGGTTTGACAACTACGGCAAGTACGGGCTCCTCTGCGGTGCAGACGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
HS106817       --> GCAGGTTCGACAACTACGGCAAGTACGGGCTCCTCTGCGGGGCAGACGGG  Raphanus sativus var. niger
FY433268       --> GCAGGTTCGACAACTACGGCAAGTACGGGCTCCTCTGCGGGGCAGACGGG  Raphanus sativus cv GSK3-1
FY434567       --> GCAGGTTCGACAACTACGGCAAGTACGGGCTCCTCTGCGGGGCAGACGGG  Raphanus sativus cv GSK3-1
FY439567       --> GCAGGTTCGACAACTACGGCAAGTACGGGCTCCTCTGCGGGGCAGACGGG  Raphanus sativus cv GSK3-1
EY931650       --> GCAGGTTTGACAACTACGGCAAGTACGGGCTCCTCTGCGGGGCAGACGGG  Raphanus sativus var. oleiformis
FY434862       --> GCAGGTTCGACAACTACGGCAAGTACGGGCTCCTCTGCGGGGCAGACGGG  Raphanus sativus cv GSK3-1
FY436153       --> GCAGGTTCGACAACTACGGCAAGTACGGGCTCCTCTGCGGGGCAGACGGG  Raphanus sativus cv GSK3-1
FY439544       --> GCAGGTTCGACAACTACGGCAAGTACGGGCTCCTCTGCGGGGCAGACGGG  Raphanus sativus cv GSK3-1
FY439628       --> GCAAGTTCAACAACTACGGCAAGTACGGGCTCCTCTGCGGGGCAGACGGG  Raphanus sativus cv GSK3-1
FY435678       --> GCAGGTTCGACAACTACGGCAAGTACGGGCTCCTCTGCGGGGCAGACGGG  Raphanus sativus cv GSK3-1
FY437360       --> GCAGGTTCGACAACTACGGCAAGTACGGGCTCCTCTGCGGGGCAGACGGG  Raphanus sativus cv GSK3-1
EY916724       --> GC................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY917017       --> GCAGGTTTGACAACTACGGCAAGTACGGGCTCCTCTGCGGTGCAGACGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD965638       --> GCAGGTTTGACAACTACGGCAAGTACGGGCTCCTCTGCGGTGCAGACGGG  Raphanus raphanistrum subsp. maritimus
EV548022       --> GCAGGTTTGACAACTACGGCAAGTACGGGCTCCTCTGCGGTGCAGACGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY439203       --> GCAGGTTCGACAACTACGGCAAGTACGGGCTCCTCCGCGGGGCAGACGGG  Raphanus sativus cv GSK3-1
FY434972       --> ................................................GG  Raphanus sativus cv GSK3-1

               451    -    501
UN14524        --> CTACCACACTTGATAGTCAACGGAGACCAGCGGCATTGGGGAGAGTTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY437799       <-- CTACCACACTTGATAGTCAACGGAGACCAGCGGCATTGGGGAGAGTTCAT
FD546059       <-- CTACCACACTTGATAGTCAACGGAGACCAGCGGCATTGGGGAGAGTTCAT
FD985979       <-- CTACCACACTTGATAGTCAACGGAGGCCAGCGGCATTGGGGAGAGTTCAT
EX751333       <-- CTATCACACTTGATAGTCAACGGAGACCAGCGGCATTGGGGAGAGTTCAT
EY895148       <-- CTACCACACTTGATAGTCAACGGAGACCAGCGGCATTGGGGAGAGTTCAT
EY945456       <-- CTACCACACTTGATAGTCAACGGAGACCAGCGGCATTGGGGAGAGTTCAT
EV572452       <-- CTACCACACTTGATAGTCAACGGAGCCCAGCGGCATTGGGGAGAGTTCAT
EX750651       <-- ..................................................
EV543780       <-- ..................................................
EV567529       --> CTACCACACTTGATAGTCAACGGAGACCAGCGGCATTGGGGAGAGTTCAT
EY950070       --> CTACCACACTTGATAGTCAACGGAGACCAGCGGCATTGGGGAGAGTTCAT
EX746183       --> CTACCACACTTGATAGTCAACGGAGACCAGCGGCATTGGGGAGAGTTCAT
FY435598       --> CTACCACACTTGATAGTCAACGGAGACCAGCGGCATTGGGGAGAGTTCAT
EY899353       --> CTACCACACTTGATAGTCAACGGAGACCAGCGGCATTGGGGAGAGTTCAT
FD550066       --> CTACCACACTTGATAGTCAACGGAGACCAGCGGCATTGGGGAGAGTTCAT
HS106817       --> CTACCACACTTGATAGTCAACGGAGACCAGCGGCATTGGGGAGAGTTCAT
FY433268       --> CTACCACACTTGATAGTCAACGGAGACCAGCGGCATTGGGGAGAGTTCAT
FY434567       --> CTACCACACTTGATAGTCAACGGAGACCAGCGGCATTGGGGAGAGTTCAT
FY439567       --> CTACCACACTTGATAGTCAACGGAGACCAGCGGCATTGGGGAGAGTTCAT
EY931650       --> CTACCACACTTCATAGTCAACGGAGACCAGCGGCATTGGGGGGAGTTCAT
FY434862       --> CTACCACACTTGATAGTCAACGGAGACCAGCGGCATTGGGGAGAGTTCAT
FY436153       --> CTACCACACTTGATAGTCAACGGAGACCAGCGGCATTGGGGAGAGTTCAT
FY439544       --> CTACCACACTTGATAGTCAACGGAGACCAGCGGCATTGGGGAGAGTTCAT
FY439628       --> CTACCACACTTGATAGTCAACGGATACCAGCGGCATTGGGGAGAGTTCAT
FY435678       --> CTACCACACTTGATAGTCAACGGAGACCAGCGGCATTGGGGAGAGTTCAT
FY437360       --> CTACCACACTTGATAGTCAACGGAGACCAGCGGCATTGGGGAGAGTTCAT
EY916724       --> ..................................................
EY917017       --> CTACCACACTTGATAGTCAACGGAGACCAGCGGCATTGGGGAGAGTTCAT
FD965638       --> CTACCACACTTGATAGTCAACGGAGACCAGCGGCATTGGGGAGAGTTCAT
EV548022       --> CTACCACACTTGATAGTCAACGGAGACCAGCGGCATTGGGGAGAGTTCAT
FY439203       --> CTACCACACTTGATAGTCAACGGAGACCAGCGGCATTGGGGAGAGTTCAT
FY434972       --> CTACCACACTTGATAGTCAACGGAGACCAGCGGCATTGGGGAGAGTTCAT

               501    -    551
UN14524        --> AACTCCAGGACTTCTCTTCCTCTACATTGCTGGGTGGATCGGGTGGG-TC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY437799       <-- AACTCCAGGACTTCTCTTCCTCTACATTGCTGGGTGGATCGGGTGGG-TC  Raphanus sativus cv GSK3-1
FD546059       <-- AACACCAGGACTTCTCTTCCTCTACATTGCTGGATGGATCGGGTGGG-TC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD985979       <-- AACACCAGGACTTCTCTTCCTCTACATTGTTGGATGGATCGGGTGGG-TC  Raphanus raphanistrum subsp. landra
EX751333       <-- AACACCAGGACTTCTCTTCCTCTACATTGCTGGATGGATCGGGTGGG-TC  Raphanus raphanistrum subsp. maritimus
EY895148       <-- AACACCAGGACTTCTCTTCCTCTACATTGCTGGATGGATCGGGTGGG-TC  Raphanus raphanistrum subsp. maritimus
EY945456       <-- AACTCCAGGACTTCTCTTCCTCTACATTGCTGGGTGGATCGGGTGGG-TC  Raphanus sativus cv Rat-Tail Radish #3870
EV572452       <-- AACACCAGGACTTTTCTTCCTCTACATTGCTGGATGGATCGGGTGGG-TC  Raphanus raphanistrum subsp. landra
EX750651       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV543780       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV567529       --> AACACCAGGACTTCTCTTCCTCTACATTGCTGGATGGATCGGGTGGG-TC  Raphanus raphanistrum subsp. landra
EY950070       --> AACTCCAGGACTTCTCTTCCTCTACATTGCTGGGTGGATCGGGTGGG-TC  Raphanus sativus cv Rat-Tail Radish #3870
EX746183       --> AACACCAGGACTTCTCTTCCTCCACATTGCTGGATGGATCGGGTGGG-TC  Raphanus raphanistrum subsp. maritimus
FY435598       --> AACTCCAGGACTTCTCTTCCTCTACATTGCTGGGT...............  Raphanus sativus cv GSK3-1
EY899353       --> AACACCAGGACTTCTCTTCCTCTACATTGCTGGATGGATCGGGTGGG-TC  Raphanus raphanistrum subsp. maritimus
FD550066       --> AACACCAGGACTTCTCTTCCTCTACATTGCTGGATGGATCGGGTGGG-TC  Raphanus raphanistrum subsp. raphanistrum (NY)
HS106817       --> AACTCCAGGACTTCTCTTCCTCTACATTGCTGGGTGGATCGGGTGGG-TC  Raphanus sativus var. niger
FY433268       --> AACTCCAGGACTTCTCTTCCTCTACATTGCTGGGTGGATCGGGTGGG-TC  Raphanus sativus cv GSK3-1
FY434567       --> AACTCCAGGACTTCTCTTCCTCTACATTGCTGGGTGGATCGGGTGGG-TC  Raphanus sativus cv GSK3-1
FY439567       --> AACTCCAGGACTTCTCTTCCTCTACATTGCTGGGTGGATCGGGTGGG-TC  Raphanus sativus cv GSK3-1
EY931650       --> AACTCCAGGACTTCTCTTCCTCTACATTGCTGGATGGATCGGGTGGG-TC  Raphanus sativus var. oleiformis
FY434862       --> AACTCCAGGACTTCTCTTCCTCTACATTGCTGGGTGGATCGGGTGGG-TC  Raphanus sativus cv GSK3-1
FY436153       --> AACTCCAGGACTTCTCTTCCTCTACATTGCTGGGTGGATCGGGTGGG-TC  Raphanus sativus cv GSK3-1
FY439544       --> AACTCCAGGACTTCTCTTCCTCTACATTGCTGGGTGGATCGGGTGGG-TC  Raphanus sativus cv GSK3-1
FY439628       --> AACTCCAGGACTTCTCTTCCTCTACATTGCTGGGTGGATCGGGTGGG-TC  Raphanus sativus cv GSK3-1
FY435678       --> AACTCCAGGACTTCTCTTCCTCTACATTGCTGGGTGGATCGGGTGGG-TC  Raphanus sativus cv GSK3-1
FY437360       --> AACTCCAGGACTTCTCTTCCTCTACATTGCTGGGTGGATCGGGTGGG-TC  Raphanus sativus cv GSK3-1
EY916724       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY917017       --> AACACCAGGACTTCTCTTCCTCTACATTGCTGGATGGATCGGGTGGG-TC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD965638       --> AACACCAGGACTTCTCTTCCTCTACATTGCTGGATGGATCGGGTGGG-TC  Raphanus raphanistrum subsp. maritimus
EV548022       --> AACACCAGGACTTCTCTTCCTCTACATTGCTGGATGGATCGGGTGGGGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY439203       --> AACTCCAGGACTTCTCTTCCTCTACATTGCTGGGTGGATCGGGTGGG-TC  Raphanus sativus cv GSK3-1
FY434972       --> AACTCCAGGACTTCTCTTCCTCTACATTGCTGGGTGGATCGGGTGGG-TC  Raphanus sativus cv GSK3-1

               551    -    601
UN14524        --> GGAAGAAGCTACTTGATAGCGATCAGTGATGAGAAGAAACCAGCGATGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY437799       <-- GGAAGAAGCTACTTGATAGCGATCAGTGATGAGAAGAAACCAGCGATGAA  Raphanus sativus cv GSK3-1
FD546059       <-- GGAAGAAGCTACTTGATAGCGATCAGTGATGAGAAGAAACCAGCCATGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD985979       <-- GGAAGAAGCTACTTGATAGCGATCAGTGATGAGAAGAAACCAGCCATGAA  Raphanus raphanistrum subsp. landra
EX751333       <-- GGAAGAAGCTACTTGATAGCGATCAGTGATGAGAAGAAACCAGCCATGAA  Raphanus raphanistrum subsp. maritimus
EY895148       <-- GGAAGAAGCTACTTGATAGCGATCAGTGATGAGAAGAAACCAGCCATGAA  Raphanus raphanistrum subsp. maritimus
EY945456       <-- GGAAGAAGCTACTTGATAGCGATCAGTGATGAGAAGAAACCAGCGATGAA  Raphanus sativus cv Rat-Tail Radish #3870
EV572452       <-- GGAAGAAGCTACTTGATAGCGATCAGTGATGAGAAGAAACCAGCCATGAA  Raphanus raphanistrum subsp. landra
EX750651       <-- .............................................ATGAA  Raphanus raphanistrum subsp. maritimus
EV543780       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV567529       --> GGAAGAAGCTACTTGATAGCGATCAGTGATGAGAAGAAACCAGCCATGAA  Raphanus raphanistrum subsp. landra
EY950070       --> GGA...............................................  Raphanus sativus cv Rat-Tail Radish #3870
EX746183       --> GGAAGAAGCTACTTGATAGCGATCAGTGATGAGAAGAAACCAGCCATGAA  Raphanus raphanistrum subsp. maritimus
FY435598       --> ..................................................  Raphanus sativus cv GSK3-1
EY899353       --> GGAAGAAGCTACTTGATAGCGATCAGTGATGAGAAGAAACCAGCCATGAA  Raphanus raphanistrum subsp. maritimus
FD550066       --> GGAAGAAGCTACTTGATAGCGATCAGTGATGAGAAGAAACCAGCCATGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
HS106817       --> GGAAGAAGCTACTTGATAGCGATCAGTGATGAGAAGAAACCAGCGATGAA  Raphanus sativus var. niger
FY433268       --> GGAAGAAGCTACTTGATAGCGATCAGTGATGAGAAGAAACCAGCGATGAA  Raphanus sativus cv GSK3-1
FY434567       --> GGAAGAAGCTACTTGATAGCGATCAGTGATGAGAAGAAACCAGCGATGAA  Raphanus sativus cv GSK3-1
FY439567       --> GGAAGAAGCTACTTGATAGCGATCAGTGATGAGAAGAAACCAGCGATGAA  Raphanus sativus cv GSK3-1
EY931650       --> GGAAGAAGCTACTTGATAGCGATCAGTGATGAGAAGAAACCAGCGATGAA  Raphanus sativus var. oleiformis
FY434862       --> GGAAGAAGCTACTTGATAGCGATCAGTGATGAGAAGAAACCAGCGATGAA  Raphanus sativus cv GSK3-1
FY436153       --> GGAAGAAGCTACTTGATAGCGATCAGTGATGAGAAGAAACCAGCGATGAA  Raphanus sativus cv GSK3-1
FY439544       --> GGAAGAAGCTACTTGATAGCGATCAGTGATGAGAAGAAACCAGCGATGAA  Raphanus sativus cv GSK3-1
FY439628       --> GGAAGAAACTACTTGATAGCGATCAGTGATGAGAAGAAACCAGCGATGAA  Raphanus sativus cv GSK3-1
FY435678       --> GGAAGAAGCTACTTGATAGCGATCAGTGATGAGAAGAAACCAGCGATGAA  Raphanus sativus cv GSK3-1
FY437360       --> GGAAGAAGCTACTTGATAGCGATCAGTGATGAGAAGAAACCAGCGATGAA  Raphanus sativus cv GSK3-1
EY916724       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY917017       --> GGAAGAAGCTACTTGATAGCGATCAGTGATGAGAAGAAAGCAGCCATGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD965638       --> GGAAGAAGCTACTTGATAGCGATCAGTGATGAGAAGAAACCAGCCATTAA  Raphanus raphanistrum subsp. maritimus
EV548022       --> GGAAGAAGCTACTTGATAGCGATCAGTGATGAGAAGAAACCAGCCATGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY439203       --> GGAAGAAGCTACTTGATAGCGATCAGTGATGAGAAGAAACCAGCGATGAA  Raphanus sativus cv GSK3-1
FY434972       --> GGAAGAAGCTACTTGATAGCGATCAGTGATGAGAAGAAACCAGCGATGAA  Raphanus sativus cv GSK3-1

               601    -    651
UN14524        --> AGAGATCATTATCGATGTTCCATTGG-CTAGTCGTCTCATCTTCCGTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY437799       <-- AGAGATCATTATCGATGTTCCATTGG-CTAGTCGTCTCATCTTCCGTGGT
FD546059       <-- AGAGATCATTATCGATGTTCCATTGG-CTAGTCGTCTCATCTTCCGTGGT
FD985979       <-- AGAGATCATTATCGATGTTCCATTGG-CTAGTCGTCTCATCTTCCGTGGT
EX751333       <-- GGAGATCATTATCGATGTcccc............................
EY895148       <-- AGAGATCATTATCGATGTTCCATTGG-CTAGTCGTCTCATCTTCCGTGGT
EY945456       <-- AGAGATCATTATCGATGTTCCATTGG-CTAGTCGTCTCATCTTCCGTGGT
EV572452       <-- AGAGATCATTATCGATGTTCCATTGG-CTAGTCGTCTCATCTTCCGTGGT
EX750651       <-- AGAGATCATTATCGATGTTCCATTGG-CTAGTCGTCTCATCTTCCGTGGT
EV543780       <-- .......ATTATCGATGTTCCATTGG-CTAGTCGTCTCATCTTCCGTGGT
EV567529       --> AGAGATCATTATCGATGTTCCATTGG-CTAGTCGTCTCATCTTCCGTGGT
EY950070       --> ..................................................
EX746183       --> AGAGATCATTATCGATGTTCCATTGG-CTAGTCGTCTCATCTTCCGTGGT
FY435598       --> ..................................................
EY899353       --> AGAGATCATTATCGATGTTCCATTGG-CTAGTCGTCTCATCTTCCGTGGT
FD550066       --> AGAGATCATTATCGATGTTCCATTGG-CTAGTCGTCTCATCTTCCGTGGT
HS106817       --> AGAGATCATTATCGATGTTCCATTGG-CTAGTCGTCTCATCTTCCGTGGT
FY433268       --> AGAGATCATTATCGATGTTCCATTGG-CTAGTCGTCTCATCTTCCGTGGT
FY434567       --> AGAGATCATTATCGATGTTCCATTGG-CTAGTCGTCTCATCTTCCGTGGT
FY439567       --> AGAGATCATTATCGATGTTCCATTGG-CTAGTCGTCTCATCTTCCGTGGT
EY931650       --> AGAGATCATTATCGATGTTCCATTGG-CTAGTCGTCTCATCTTCCGTGGT
FY434862       --> AGAGATCATTATCGATGTTCCATTGG-CTAGTCGTCTCATCTTCCGTGGT
FY436153       --> AGAGATCATTATCGATGTTCCATTGG-CTAGTCGTCTCATCTTCCGTGGT
FY439544       --> AGAGATCATTATCGATGTTCCATTGG-CTAGTCGTCTCATCTTCCGTGGT
FY439628       --> AGAGATCATTATCGATGTTCCATTGG-CTAGTCGTCTCAACTTCCGTGGT
FY435678       --> AGAGATCATTATCGATGTTCCATTGG-CTAGTCGTCTCATCTTCCGTGGT
FY437360       --> AGAGATCATTATCGATGTTCCATTGG-CTAGTCGTCTCATCTTCCGTGGT
EY916724       --> ..................................................
EY917017       --> AGAGATCATTATCGATGTTCCATTGG-CTAGTCGTCTCATCTTCCGTGGT
FD965638       --> AGAGATCATTATCGATGTTCCATTGG-CTAGTCGTCTCATCTTCCGTGGT
EV548022       --> AGAGATCATTATCGATGTTCCATTGGGCTAGTCGTCTCATCTTCCGTGGT
FY439203       --> AGAGATCATTATCGATGTTCCATTGG-CTAGTCGTCTCATCTTCCGTGGT
FY434972       --> AGAGATCATTATCGATGTTCCATTGG-CTAGTCGTCTCATCTTCCGTGGT

               651    -    701
UN14524        --> TTCATTTGGCCCGTTGCTGCTTACAGAGCTTTACTCAATGGTGATCTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY437799       <-- TTCATTTGGCCCGTTGCTGCTTACAGAGCTTTAATCAATGGTGATCTCAT  Raphanus sativus cv GSK3-1
FD546059       <-- TTCATTTGGCCCATTGCTGCTTACAGAGCGTTACTCAATGGTGATCTCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD985979       <-- TTCATTTGGCCCATTGCTGCTTACAGAGCGTTACTCAATGGTGATCTCAT  Raphanus raphanistrum subsp. landra
EX751333       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY895148       <-- TTCATTTGGCCCATTGCTGCTTACAGAGCGTTACTCAATGGTGATCTCAT  Raphanus raphanistrum subsp. maritimus
EY945456       <-- TTCATTTGGCCCGTTGCTGCTTACAGAGCTTTAATCAATGGTGATCTCAT  Raphanus sativus cv Rat-Tail Radish #3870
EV572452       <-- TTCATTTGGCCCATTGCTGCTTACAGAGCGTTACTCAATGGTGATCTCAT  Raphanus raphanistrum subsp. landra
EX750651       <-- TTCATTTGGCCCATTGCTGCTTACAGAGCGTTACTCAATGGTGATCTCAT  Raphanus raphanistrum subsp. maritimus
EV543780       <-- TTCATTTGGCCCATTGCTGCTTACAGAGCGTTACTCAATGGTGATCTCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV567529       --> TTCATTTGGCCCATTGCTGCTTACAGAGCGTTACTCAATGGTGATCTCAT  Raphanus raphanistrum subsp. landra
EY950070       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX746183       --> TTCATTTGGCCCATTGCTGCTTACAGAGCGTTACTCAATGGTGATCTCAT  Raphanus raphanistrum subsp. maritimus
FY435598       --> ..................................................  Raphanus sativus cv GSK3-1
EY899353       --> TTCATTTGGCCCATTGCTGCTTACAGAGCGTTACTCAATGGTGATCTCAT  Raphanus raphanistrum subsp. maritimus
FD550066       --> TTCATTTGGCCCATTGCTGCTTACAGAGCGTTACTCAATGGTGATCTCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
HS106817       --> TTCATTTGGCCCGTTGCTGCTTACAGAGCTTTAATCAATGGTGATCTCAT  Raphanus sativus var. niger
FY433268       --> TTCATTTGGCCCGTTGCTGCTTACAGAGCTTTAATCAATGGTGATCTCAT  Raphanus sativus cv GSK3-1
FY434567       --> TTCATTTGGCCCGTTGCTGCTTACAGAGCTTTAATCAATGGTGATCTCAT  Raphanus sativus cv GSK3-1
FY439567       --> TTCATTTGGCCCGTTGCTGCTTACAGAGCTTTAATCAATGGTGATCTCAT  Raphanus sativus cv GSK3-1
EY931650       --> TTCATTTGGCCCGTTGCTGCTTACAGAGCTTTACTCAATGGTGATCTCAT  Raphanus sativus var. oleiformis
FY434862       --> TTCATTTGGCCCGTTGCTGCTTACAGAGCTTTAATCAATGGTGATCTCAT  Raphanus sativus cv GSK3-1
FY436153       --> TTCATTTGGCCCGTTGCTGCTTACAGAGCTTTAATCAATGGTGATCTCAT  Raphanus sativus cv GSK3-1
FY439544       --> TTCATTTGGCCCGTTGCTGCTTACAGAGCTTTAATCAATGGTGATCTCAT  Raphanus sativus cv GSK3-1
FY439628       --> TTCATTTGGCCCGTTGCTGCTTACAGAGCTTTAATCAATGATGATCTCAT  Raphanus sativus cv GSK3-1
FY435678       --> TTCATTTGGCCCGTTGCTGCTTACAGAGCTTTAATCAATGGTGATCTCAT  Raphanus sativus cv GSK3-1
FY437360       --> TTCATTTGGCCCGTTGCTGCTTACAGAGCTTTAATCAATGGTGATCTCAT  Raphanus sativus cv GSK3-1
EY916724       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY917017       --> TTCATTTGGCCCATTGCTGCTTACAGAGCGTTACTCAATGGTGATCTCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD965638       --> TTCATTTGGCCCATTGCTGCTTACAGAGCGTTACTCAATGGTGATCTCAT  Raphanus raphanistrum subsp. maritimus
EV548022       --> TTCATTTGGCCCATTGCTGCTTACAGAGCGTTACTCAATGGTGATCTCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY439203       --> TTCATTTGGCCCGTTGCTGCTTACAGAGCTTTAATCAATGGTGATCTCAT  Raphanus sativus cv GSK3-1
FY434972       --> TTCATTTGGCCCGTTGCTGCTTACAGAGCTTTAATCAATGGTGATCTCAT  Raphanus sativus cv GSK3-1

               701    -    751
UN14524        --> CGCTAAGGATGTCTAGAAACATATCTGCTTTTCATCTTTTGTTTGCTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY437799       <-- CGCTAAGGATGTCTAGAAACATATCTGCTTTTCATCTTTTGTTTGCTTCT  Raphanus sativus cv GSK3-1
FD546059       <-- CGCCAAGGATGTCTAGAAACATATCTGCTTTTCATCTTTTGTTTGCTTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD985979       <-- CGCCAAGGATGTCTAGAAACATATCTGCTTTTCATCTTTTGTTTGCTTCT  Raphanus raphanistrum subsp. landra
EX751333       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY895148       <-- CGCCAAGGATGTCTAGAAACATATCTGCTTTTCATCTTTTGTTTGCTTCT  Raphanus raphanistrum subsp. maritimus
EY945456       <-- CGCTAAGGATGTCTAGAAACATATCTGCTTTTCATCTTTTGTTTGCTTCG  Raphanus sativus cv Rat-Tail Radish #3870
EV572452       <-- CGCCAAGGATGTCTAGAAACATATCTGCTTTTCATCTTTTGTTTGCTTCT  Raphanus raphanistrum subsp. landra
EX750651       <-- CGCCAAGGATGTCTAGAAACATATCTGCTTTTCATCTTTTGTTTGCTTCT  Raphanus raphanistrum subsp. maritimus
EV543780       <-- CGCCAAGGATGTCTAGAAACATATCTGCTTTTCATCTTTTGTTTGCTTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV567529       --> CGCCAAGGATGTCTAGAAACATATCTGCTTTTCATCTTTTGTTTGCTTCT  Raphanus raphanistrum subsp. landra
EY950070       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX746183       --> CGCCAAG-ATGTCTAGAAACATATCTGCTTTTCATCTTTTGTTTGCTTCT  Raphanus raphanistrum subsp. maritimus
FY435598       --> ..................................................  Raphanus sativus cv GSK3-1
EY899353       --> CGCCAAGGATGTCTAGAAACATATCTGCTTTTCATCTTTTGTTTGCTTCT  Raphanus raphanistrum subsp. maritimus
FD550066       --> C.................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
HS106817       --> CGCTAAGGATGTCTAGAAACATATCTGCTTTTCATCT.............  Raphanus sativus var. niger
FY433268       --> CGCTAAGGATGTCTAGAAACATATCTGCTTTTCATCTTTTGTTTGCTTCT  Raphanus sativus cv GSK3-1
FY434567       --> CGCTAAGGATGTCTAGAAACATATCTGCTTTTCATCTTTTGTTTGCTTCT  Raphanus sativus cv GSK3-1
FY439567       --> CGCTAAGGATGTCTAGAAACATATCTGCTTTTCATCTTTTGTTTGCTTCT  Raphanus sativus cv GSK3-1
EY931650       --> CGCc..............................................  Raphanus sativus var. oleiformis
FY434862       --> CGCTAAGGATGTCTAGAAACATATCTGCTTTTCATCTTTTGTTTGCTTCT  Raphanus sativus cv GSK3-1
FY436153       --> CGCTAAGGATGTCTAGAAACATATCTGCTTTTCATCTTTTGTTTGCTTCT  Raphanus sativus cv GSK3-1
FY439544       --> CGCTAAGGATGTCTAGAAACATATCTGCTTTTCATCTTTTGTTTGCTTCT  Raphanus sativus cv GSK3-1
FY439628       --> CGCTAAGGATGTCTAGAAACATATCTGCTTTTCATCTTTTGTTTGCTTCT  Raphanus sativus cv GSK3-1
FY435678       --> CGCTAAGGATGTCTAGAAACATATCTGCTTTTCATCTTTTGTTTGCTTCT  Raphanus sativus cv GSK3-1
FY437360       --> CGCTAAGGATGTCTAGAAACATATCTGCTTTTCATCTTTTGTTTGCTTCT  Raphanus sativus cv GSK3-1
EY916724       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY917017       --> CGCCAAGGATGTCTAGAAACATATCTGCTTTTCATCTTTTGTTTGCTTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD965638       --> CGCCAAGGATGTCTAGAAACATATCTGCTTTTCATCTTTTGTTTGCTTCT  Raphanus raphanistrum subsp. maritimus
EV548022       --> CG................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY439203       --> CGCTAAGGATGTCTAGAAACATATCTGCTTTTCATCTTTTGTTTGCTTCT  Raphanus sativus cv GSK3-1
FY434972       --> CGCTAAGGATGTCTAGAAACATATCTGCTTTTCATCTTTTGTTTGCTTCT  Raphanus sativus cv GSK3-1

               751    -    801
UN14524        --> TTCTCTATCGCTCTTGTGTTTTCCATTGTATGTAATTCAATCTCTTTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY437799       <-- TTCTCTATCGCTCTTGTGTTTTCCATTGTATGTAATTCAATCTCTTTCTc  Raphanus sativus cv GSK3-1
FD546059       <-- TTCTCTATCGCTCTTGTGTTTTCCATTGTATGTA-TTCAATCTCTTTCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD985979       <-- TTCTCTATCGCTCTTGTGTTTTCCGTTGTATGTA-TTCAATCTCTTTCTT  Raphanus raphanistrum subsp. landra
EX751333       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY895148       <-- TTCTCTATCGCTCTTGTGTTTTCCATTGTATGTA-TTCAATCTCTTTCTT  Raphanus raphanistrum subsp. maritimus
EY945456       <-- TTCTCTATCGCTCTTGTGTTTTCCATTGTATGTAATTCAATCTCTTTCTT  Raphanus sativus cv Rat-Tail Radish #3870
EV572452       <-- TTCTCTATCGCTCTTGTGTTTTCCATTGTATGTA-TTCAATCTCTTTCTT  Raphanus raphanistrum subsp. landra
EX750651       <-- TTCTCTATCGCTCTTGTGTTTTCCATTGTATGTA-TTCAATCTCTTTCTT  Raphanus raphanistrum subsp. maritimus
EV543780       <-- TTCTCTATCGCTCTTGTGTTTTCCATTGTATGTA-TTCAATCTCTTTCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV567529       --> TTCTCTATCGCTCTTGTGTTTTCCATTGTATGTA-TTCAATCTCT.....  Raphanus raphanistrum subsp. landra
EY950070       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX746183       --> TTCTCTATCGCTCTTGTGTTTTCCATTGTATGTA-TTCAATCTCTTTCTA  Raphanus raphanistrum subsp. maritimus
FY435598       --> ..................................................  Raphanus sativus cv GSK3-1
EY899353       --> TTCTCTATCGCTCTTGTGTTT-CCATTGTATGTA-TTCAATCTCTTTCT.  Raphanus raphanistrum subsp. maritimus
FD550066       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
HS106817       --> ..................................................  Raphanus sativus var. niger
FY433268       --> TTCTCTATCGCTCTTGTGTTTTCCATTGTATGTAATTCAATCTCTTTCTT  Raphanus sativus cv GSK3-1
FY434567       --> TTCTCTATCGCTCTTGTGTTTTCCATTGTATGTAATTCAATCTCTTTCTT  Raphanus sativus cv GSK3-1
FY439567       --> TTCTCTATCGCTCTTGTGTTTTCCATTGTATGTAATTCAATCTCTTTCTT  Raphanus sativus cv GSK3-1
EY931650       --> ..................................................  Raphanus sativus var. oleiformis
FY434862       --> TTCTCTATCGCTCTTGTGTTTTCCATTGTATGTAATTCAATCTCTTTCTT  Raphanus sativus cv GSK3-1
FY436153       --> TTCTCTATCGCTCTTGTGTTTTCCATTGTATGTAATTCAATCTCTTTCTT  Raphanus sativus cv GSK3-1
FY439544       --> TTCTCTATCGCTCTTGTGTTTTCCATTGTATGTAATTCAATCTCTTTCTT  Raphanus sativus cv GSK3-1
FY439628       --> TTCTCTATCGCTCTTGTGTTTTCCATTGTATGTAATTCAATCT.......  Raphanus sativus cv GSK3-1
FY435678       --> TT................................................  Raphanus sativus cv GSK3-1
FY437360       --> TTCTCTATCGCTCTTGTGTTTTCCATTGTATGTAATTCAATCTCTTTCTT  Raphanus sativus cv GSK3-1
EY916724       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY917017       --> TTCTCTATCGCTCTTGTGTTTTCCATTGTATGTA-TTCAATCTCTTTCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD965638       --> TTCTCTATCGCTCTTGTGTTTTCCATTGTATGTA-TTCAATCTCTTTCTT  Raphanus raphanistrum subsp. maritimus
EV548022       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY439203       --> TTCTCTATCGCTCTTGTGTTTTCCATTGTATGTAATTCAATCTCTTTCTT  Raphanus sativus cv GSK3-1
FY434972       --> TTCTCTATCGCTCTTGTGTTTTCCATTGTATGTAATTCAATCTCTTTCTT  Raphanus sativus cv GSK3-1

               801    -    851
UN14524        --> AAAAAGAAAATTATGTATTCAATCTCTTGTTAACTCTTCTTGTCTCTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY437799       <-- ..................................................
FD546059       <-- AAAAAGAAAATTATGTATTCAATCTCTTGTTAACTCTTCTTGTCTCTGCA
FD985979       <-- AAAAAGAAAATTATGTATTCAATCTCTTGTTAACTCTTCTTGTCTCTGCA
EX751333       <-- ..................................................
EY895148       <-- AAAAAGAAAATTATGTATTCAATCTCTTGTTAACT...............
EY945456       <-- CAAAAAAAAA........................................
EV572452       <-- AAAAAGAAAATTATGTATgc..............................
EX750651       <-- AAAAAGAAAATTATGTATTCAATCTCTTGTTAGCTCTTCTTGTCTCTGCA
EV543780       <-- AAAAAGAAAATTATGTATTCAATCTCTTGTTAACTCTTCTTGTCTCTGCA
EV567529       --> ..................................................
EY950070       --> ..................................................
EX746183       --> AAAgaaatatgta.....................................
FY435598       --> ..................................................
EY899353       --> ..................................................
FD550066       --> ..................................................
HS106817       --> ..................................................
FY433268       --> c.................................................
FY434567       --> c.................................................
FY439567       --> c.................................................
EY931650       --> ..................................................
FY434862       --> ..................................................
FY436153       --> c.................................................
FY439544       --> c.................................................
FY439628       --> ..................................................
FY435678       --> ..................................................
FY437360       --> c.................................................
EY916724       --> ..................................................
EY917017       --> AAAAAGAAAATTATGTATTCAATCTCTTGTTAACTCTTCTTGTCTCTGCA
FD965638       --> AAAAAGAAAATTATGTATTCAATCTCTTGTTAACTCTTCTTGTCTCTGCA
EV548022       --> ..................................................
FY439203       --> c.................................................
FY434972       --> c.................................................

               851    -    901
UN14524        --> ATATTGACAAAAATATATTATGATTTTTGTTCCGAGATTAGTCAACATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY437799       <-- ..................................................
FD546059       <-- ATATTGACAAAAATATATTATGATTTTTGTcc..................
FD985979       <-- ACATTGACAAAAATATATTATGATTTTTGTTCCGAGATTAGTCAACATTG
EX751333       <-- ..................................................
EY895148       <-- ..................................................
EY945456       <-- ..................................................
EV572452       <-- ..................................................
EX750651       <-- ATATTGACAAAAATATATTATGATTTTTGTTCCGAGATTAatc.......
EV543780       <-- ATATTGAC..........................................
EV567529       --> ..................................................
EY950070       --> ..................................................
EX746183       --> ..................................................
FY435598       --> ..................................................
EY899353       --> ..................................................
FD550066       --> ..................................................
HS106817       --> ..................................................
FY433268       --> ..................................................
FY434567       --> ..................................................
FY439567       --> ..................................................
EY931650       --> ..................................................
FY434862       --> ..................................................
FY436153       --> ..................................................
FY439544       --> ..................................................
FY439628       --> ..................................................
FY435678       --> ..................................................
FY437360       --> ..................................................
EY916724       --> ..................................................
EY917017       --> ATATTGACAAAA-TATATTATGATTTTTGTT...................
FD965638       --> ATATTGACAAAAA.....................................
EV548022       --> ..................................................
FY439203       --> ..................................................
FY434972       --> ..................................................

               901    -    951
UN14524        --> TAAACTGAGCTTCTATCATATTTATATCCTTGTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY437799       <-- ...................................
FD546059       <-- ...................................
FD985979       <-- TAAACTGAGCTTCTATCATATTTATATCCTTGTAG
EX751333       <-- ...................................
EY895148       <-- ...................................
EY945456       <-- ...................................
EV572452       <-- ...................................
EX750651       <-- ...................................
EV543780       <-- ...................................
EV567529       --> ...................................
EY950070       --> ...................................
EX746183       --> ...................................
FY435598       --> ...................................
EY899353       --> ...................................
FD550066       --> ...................................
HS106817       --> ...................................
FY433268       --> ...................................
FY434567       --> ...................................
FY439567       --> ...................................
EY931650       --> ...................................
FY434862       --> ...................................
FY436153       --> ...................................
FY439544       --> ...................................
FY439628       --> ...................................
FY435678       --> ...................................
FY437360       --> ...................................
EY916724       --> ...................................
EY917017       --> ...................................
FD965638       --> ...................................
EV548022       --> ...................................
FY439203       --> ...................................
FY434972       --> ...................................