1      -     51
UN14578        --> GCAGGAACATAATCTCTATAAGAATTTGAGAAAAAAAAATGTAAATCCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754445       <-- ..................................................
EX894983       <-- ..................................................
EV526187       <-- ..................................................
EW726260       <-- ..................................................
EV530731       --> GCAGGAACATAATCTCTATAAGAATTTGAGAAAAAAAAATGTAAATCCAC
FD967436       --> ..................................................
EW729854       --> ..................................................
EX899221       --> ..................................................

               51     -    101
UN14578        --> ATTTTGAAGACATAACAAAGTGTTTAATCACTTCAGTAGTCGCAGTATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754445       <-- ...............gAAAGTGTTTAATCACTTCAGTAGTCGCAGTATTA
EX894983       <-- ..................................................
EV526187       <-- ..................................................
EW726260       <-- ..................................................
EV530731       --> ATTTTGAAGACATAACAAAGTGTTTAATCACTTCAGTAGTCGCAGTATTA
FD967436       --> ..................................................
EW729854       --> ..................................................
EX899221       --> ..................................................

               101    -    151
UN14578        --> TTCCATCCGTATAGCAGCATTTTATTTCTTGTCGCCAGTGGCTACCCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754445       <-- TTCCATCCGTATAGCAGCATTTTATTTCTTGTCGCCAGTGGCTACCCAAG
EX894983       <-- ..................................................
EV526187       <-- ..................................................
EW726260       <-- ..................................................
EV530731       --> TTCCATCCGTATAGCAGCATTTTATTCCTTGTCGCCAGTGGCTACTCGAG
FD967436       --> ..CCATCCGTATAGCAGCATTTTATTTCTTGTCGCCAGTGGCTACCCAAG
EW729854       --> ..................................................
EX899221       --> ..................................................

               151    -    201
UN14578        --> AGCCAACAGTTGAAAAATAGAAGAAAATAATAAATTCAATTAGAGTAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754445       <-- AGCCAACAGTTGAAAAATAGAAGAAAATAATAAATTCAATTAGAGTAGTT
EX894983       <-- ..................................................
EV526187       <-- ..................................................
EW726260       <-- ..................................................
EV530731       --> AGCCAACAGTTGAAAAATAGAAGAAAATAATAAATTTAATTAGAGTAGTT
FD967436       --> AGCCAACAGTTGAAAAATAGAAGAAAATAATAAATTCAATTAGAGTAGTT
EW729854       --> ..................................................
EX899221       --> ..................................................

               201    -    251
UN14578        --> TAAAGCTTTTGCTCAGAGGCAGAGCTTTT--AGTTGTGTTTGCCGTCGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754445       <-- TAAAGCTTTTGCTCAGAGGCAGGGCTTTT--AGTTGTGTTTGCCGTCGTT
EX894983       <-- ..................................................
EV526187       <-- ..................................................
EW726260       <-- ..................................................
EV530731       --> TAAAGATTTTGCTCAGAGGCAGAGCTTTTTTAGTTGTGTTTGCCGTCGTT
FD967436       --> TAAAGCTTTTGCTCAGAGGCAGAGCTTTT--AGTTGTGTTTGCCGTCGTT
EW729854       --> .................GGCAGAGCTTTT--AGTTGTGTTTGCCGTCGTT
EX899221       --> .....................GAGCTTTT--AGTTGTGTTTGCCGTCGTT

               251    -    301
UN14578        --> AAACTGTGCGTTTTTGGAAGACTTGAAAGTTTGAAGAAACTCTTTAGCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754445       <-- AAACTGTGCGTTTTTGGAAGACTTGAAAGTTTGAAGAAACTCTTTAGCCT
EX894983       <-- ..................................................
EV526187       <-- ..................................................
EW726260       <-- ..................................................
EV530731       --> AAACTGTGCGTTTTTGGAAGACTTGAAAGTTTGAAGAAACTCTTTAGCCT
FD967436       --> AAACTGTGCGTTTTTGGAAGACTTGAAAGTTTGAAGAAACTCTTTAGCCT
EW729854       --> AAACTGTGCGTTTTTGGAAGACTTGAAAGTTTGAAGAAACTCTTTAGCCT
EX899221       --> AAACTGTGCGTTTTTGGAAGACTTGAAAGTTTGAAAAAACTCTTTAGCCT

               301    -    351
UN14578        --> TCTGCAACTCCTGCTTCTCCCTCGACTTGTCCCACTTGTGTTCACTCGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754445       <-- TCTGCAACTCCTGCTTCTCCCTCGACTTGTCCCACTTGTGTTCACTCGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894983       <-- .............................TCCCACTTGTGTACACTCGCT  Raphanus sativus cv Early Scarlet Globe
EV526187       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW726260       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV530731       --> TCTGCAACTCCTGTTTCTCCCTCGACTTGTCCCACTTGTGTTCACTCGCT  Raphanus raphanistrum subsp. maritimus
FD967436       --> TCTGCAACTCCTGCTTCTCCCTCGACTTGTCCCACTTGTGTTCACTCGCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW729854       --> TCTGCAACTCCTGCTTCTCCCTCGACTTGTCCCACTTGTGTACACTCGCT  Raphanus sativus cv Early Scarlet Globe
EX899221       --> TCTGCAACTCCTGCTTCTCCCTCGACTTGTCCCACTTGTGTACACTCGCT  Raphanus sativus cv Early Scarlet Globe

               351    -    401
UN14578        --> AGAATCTCCACCACACGCTGCAACGCCCTCGCCGCTGCGTCTGTGTCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754445       <-- AGAATCTCCACCACACGCTGCAACGCCCTTGCCGCTGCGTCTGTGTCCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894983       <-- AGAATCTCCACCACACGCTGCAAAGCCCTCGCCGCTGCGTCTGTGTCCAA  Raphanus sativus cv Early Scarlet Globe
EV526187       <-- .............CACGCTGCAACGCCCTCGCCGCTGCGTCTGTGTCCAA  Raphanus raphanistrum subsp. maritimus
EW726260       <-- ..............................GCCGCTGCGTCTGTGTCCAA  Raphanus sativus cv Early Scarlet Globe
EV530731       --> AGAATCTCCACCACACGCTGCAACGCCCTCGCCGCTGCGTCTGTGTCCAA  Raphanus raphanistrum subsp. maritimus
FD967436       --> AGAATCTCCACCACACGCTGCAACGCCCTCGCCGCTGCGTTTGTGTCCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW729854       --> AGAATCTCCACCACACGCTGCAAAGCCCTCGCCGCTGCGTCTGTGTCCAA  Raphanus sativus cv Early Scarlet Globe
EX899221       --> AGAATCTCCACCACACGCTGCAAAGCCCTCGCCGCTGCGTCTGTGTCCAA  Raphanus sativus cv Early Scarlet Globe

               401    -    451
UN14578        --> GAACGCTATTCTACATCTCCTTGCTATGAAATCAACCGCTGATTCGCAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754445       <-- GAACGCTATTCTACATCTCCTTGCTATGAAATCAACCGCTGACTCGCAGT
EX894983       <-- GAACGCTATTCTACATCTCCTTGCTATGAAATCAACCGCTGATTCGCAGT
EV526187       <-- GAACGCTATTCTACATCTCCTTGCTATGAAATCAACCGCTGATTCGCAGT
EW726260       <-- GAACGCTATTCTACATCTCCTTGCTATGAAATCAACCGCTGATTCGCAGT
EV530731       --> GAACGCTATTCTACATCTCCTTGCTATGAAATCAACCGCTGATTCGCAGT
FD967436       --> GAACGCTATTCTACATCTCCTTGCTATAAAATCAACAGCTGATTCGCAGT
EW729854       --> GAACGCTATTCTACATCTCCTTGCTATGAAATCAACCGCTGATTCCCAGT
EX899221       --> GAACGCTATTCTACATCTCCTTGCTATGAAATCAACCGCTGATTCGCAGT

               451    -    501
UN14578        --> ACTCGTGCCTTGCACAGTAAGCAACCTCTGCTTCCAGAAACGGATGTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754445       <-- ACTCGTGCCTTGCACAGTAAGCAACCTCTGCTTCCAGAAACGGATGTCCA
EX894983       <-- ACTCGTGCCTTGCACAGTAAGCAACCTCTGCTTCCAGAAACGGATGTCCA
EV526187       <-- ACTCGTGCGTTGCACAGTAAGCAACCTCTGCTTCCAGAAACGGATGTCCA
EW726260       <-- ACTCGTGCCTTGCACAGTAAGCAACCTCTGCTTCCAGAAACGGATGTCCA
EV530731       --> ACTCGTGCCTTGCACAGTAAGCAACCTCTGCTTCCAGAAACGGATGTCCA
FD967436       --> ACTCGTGCCTTGCACAGTAAGCAACCTCTGCTTCCAGAAACGGATGTCCA
EW729854       --> ACTCGTGCCTTGCACAGTAAGCAACCTCTGCTTCCAGAAACGGATGTCCA
EX899221       --> ACTCGTGCCTTGCACAGTAAGCAACCTCTGCTTCCAGAAACGGATGTCCA

               501    -    551
UN14578        --> TGTGCCAACCGTTTCCCCAAACCCTCCTCCTGAGCAATGGTGGCGACTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754445       <-- TGTGCCAACCGTTTCCCCAAACCCTCCTCCTGAGCTATGGTTGCGACTCG
EX894983       <-- TGTGCCAACCGTTTCCCCAAACCCTCCTCCTGAGCAATGGTGGCGACTCG
EV526187       <-- TGTGCCAAACGTTTCCCCAAACCCTCCTC-TGAGCAATGGTGGCGACTCG
EW726260       <-- TGTGCCAACCGTTTCCCCAAACCCTCCTCCTGAGCAATGGTGGCGACTCG
EV530731       --> TGTGCCAAACGTTTCCCCAAACCCTCCTCCTGAGCAATGGTGGCGACTCG
FD967436       --> TGTGCCAATCGTTTCCCCAAACCCTCCTCCTGAGCAATGGTGGCGACCCT
EW729854       --> TGTGCCAACCGTTTCCCCAAACCCTCCTCCTGAGCAATGGTGGCGACTCG
EX899221       --> TGTGCCAACCGTTTCCCCAAACCCTCCTCCTGAGCAATGGTGGCGACTCG

               551    -    601
UN14578        --> GTCAGCCATTGAACCATAGGCATGAGACAAATGCTTAGCAGCAGCTGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754445       <-- GTCAGCCATTGAACCATAGGCATGAGACAAATGCTTAGCAGCAGCTGTGT
EX894983       <-- GTCAGCCATTGAACCATAGGCATGAGACAAATGCTTAGCAGCAGCTGTGT
EV526187       <-- GTCAGCCATTGAACCATAGGCATGAGACAAATGCTTAGCAGCAGCTGTGT
EW726260       <-- GTCAGCCATTGAACCATAGGCATGAGACAAATGCTTAGCAGCAGCTGTGT
EV530731       --> GTCAGCCATTGAACCATAGGCATGAGACAAATGCTTAGCAGCAGCTGTGT
FD967436       --> GTCAGCCATTGAACCATAGGCATGAGACAAATGCTTAGCAGCAGCTGTGT
EW729854       --> GTCAGCCATTGAACCATAGGCATG..........................
EX899221       --> GTCAGCCATTGAACCATAGGCAT...........................

               601    -    651
UN14578        --> CCATTGCTCCAGGAACCACTTTACCACCATATGTTTTCTTCATGCGCACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754445       <-- CCATTGCTCCAGGAACCACTTTACCACCATAGGTTTTCTTCATGCGCACG
EX894983       <-- CCATTGCTCCAGGAACCACTTTACCACCATATGTTTTCTTCATGCGCACG
EV526187       <-- CCATTGCTCCAGGAACCACTTTACCACCATATGTTTTCTTCATGCGCACG
EW726260       <-- CCATTGCTCCAGGAACCACTTTACCACCATATGTTTTCTTCATGCGCACG
EV530731       --> CCATTGCTCCAGGAACCACTTTACCACCATATGTTTTCTTCATGCGCACG
FD967436       --> CCATTGCTCCAGGAACCACTTTACCACCGTATGTTTTCTTCATGCGCACG
EW729854       --> ..................................................
EX899221       --> ..................................................

               651    -    701
UN14578        --> TACTGCTGCGCAAGAGCTGTGAAAGAAGATGGTTCCCATCCATAAGAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754445       <-- TACTGCTGCGCAAGAGCTGTGAAAGAAGATGGTTCCC.............
EX894983       <-- TATTGCTGCGTAAGAGCTGTGAAAGAAGATGGTTCCCATCCATAAGAGCC
EV526187       <-- TACTGCTGCGCAAGAGCTGTGAAAGAAGATGGTTCCCATCCATAAGAGCC
EW726260       <-- TATTGCTGCGTAAGAGCTGTGAAAGAAGATGGTTCCCATCCATAAGAGCC
EV530731       --> TACTGCTGCGCAAGAGCTGTGAAAGAAGATGGTTCCCATCCATAAGAGCC
FD967436       --> TACTGCTGCGCAAGAGCTGTGAAAGAAGATGGTTCCCATCCATAAGAGCC
EW729854       --> ..................................................
EX899221       --> ..................................................

               701    -    751
UN14578        --> TAGAATCTGTAGCTTCTGTGTTACACATTCATTGGTTGGACTCAGCTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754445       <-- ..................................................
EX894983       <-- TAGAATCTGTAGCTTCTGTGTTACACATTCGTTGGTTGGACTCAGCTTTC
EV526187       <-- TAGAATCTGTAACTTCTGTGTTACACATTCATTGGTTGGACTCAGCTTTC
EW726260       <-- TAGAATCTGTAGCTTCTGTGTTACACATTCGTTGGTTGGACTCAGCTTTC
EV530731       --> TAGAATCTGTAACTTCTGTGTTACACATTCATTGGTTGGACTCAGCTTTC
FD967436       --> TAGAATCTGTAGCTTCTGTGTTACACACTCATTGGTTGGACGCAGCTTTC
EW729854       --> ..................................................
EX899221       --> ..................................................

               751    -    801
UN14578        --> CCGATTTGATTGCTGCATCAACCGCATCTTCCGCCATACTTCGATAAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754445       <-- ..................................................
EX894983       <-- CAGATTTGATTGCTGCATCAACCGCATCTTCCGCCATACTTCGATAAGTA
EV526187       <-- CCGATTTGATTGCTGCATCAACCGCATCTTCCGCCATGCTTCGATAAGTA
EW726260       <-- CAGATTTGATTGCTGCATCAACCGCATCTTCCGCCATACTTCGATAAGTA
EV530731       --> CCGATTTGATTGCTGCATCAACCGCATCTTCCGCCATGCTTCGATAAGTA
FD967436       --> CCGATTTGATTGCTGCATCGACCGCATCTTCCGCCATACTTCGATA....
EW729854       --> ..................................................
EX899221       --> ..................................................

               801    -    851
UN14578        --> GTCCATTTTCCACCCGTGATTGTGACCAGACCAGGGTTCTCCTCGAAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754445       <-- ..................................................
EX894983       <-- GTCCATTTTCCACCAGTGATTGTGACCAGACCAGGGTTCTCCTCGAAGAC
EV526187       <-- GTCCATTTTCCACCCGTGATTGTGACCAGACCAGGGTTCTCCTCGAAGAC
EW726260       <-- GTCCATTTTCCACCAGTGATTGTGACCAGACCAGGGTTCTCCTCGAAGAC
EV530731       --> GTCCATTTTCCACCCGTGATTGTGACCAGACCAGGGTTCTC.........
FD967436       --> ..................................................
EW729854       --> ..................................................
EX899221       --> ..................................................

               851    -    901
UN14578        --> AACGTGGTCTCTGGAGATACTCTCTGTGCTCTTTGCTGTAGGATCCATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754445       <-- ..................................................
EX894983       <-- AACGTGGTCTCTGGAGATACTCTCTGTGCTCTTTGCTGTAGGATCCATGG
EV526187       <-- AACGTGGTCTCTGGAGATACTCTCTGTGCTCTTTGCTGTTGGATCCATGG
EW726260       <-- AACGTGGTCTCTGGAGATACTCTCTGTGCTCTTTGCTGTAGGATCCATGG
EV530731       --> ..................................................
FD967436       --> ..................................................
EW729854       --> ..................................................
EX899221       --> ..................................................

               901    -    951
UN14578        --> CCAATGGACGGATACCACTCCAAGCAGAAAGCACATCAGTACGTCGAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754445       <-- ..................................................
EX894983       <-- CCAATGGACGGATACCACTCCAAGCAGAAAGCACATCAGTACGTCGAACC
EV526187       <-- CCAATGGTCGGATACCACTCCAAGCCGAAAGAACATCAGTACGTCGAACC
EW726260       <-- CCAATGGACGGATACCACTCCAAGCAGAAAGCACATCAGTACGTCGAACC
EV530731       --> ..................................................
FD967436       --> ..................................................
EW729854       --> ..................................................
EX899221       --> ..................................................

               951    -   1001
UN14578        --> TTAATGTTAAGATAGTCGCTGATTGCATCCAGTATAAACTGAATCTCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754445       <-- ..................................................
EX894983       <-- TTAATGTTAAGATAGTCGCTGATTGCATCCAGTATAAACTGAATCTCATC
EV526187       <-- TTAATGTTAAGATAGTCGCTGATTGCATCCAGTATAAACTGAATCTCATC
EW726260       <-- TTAATGTTAAGATAGTCGCTGATTGCATCCAGTATAAACTGAATCTCATC
EV530731       --> ..................................................
FD967436       --> ..................................................
EW729854       --> ..................................................
EX899221       --> ..................................................

               1001   -   1051
UN14578        --> CTCATGAGGTTCAGGAAGCGGAGTGATTGATGTATTAGAGTCTGTAGTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754445       <-- ..................................................
EX894983       <-- CTCATGAGGTTCAGGAAGCGGAGTGATTGATGTATTAGAGTCTGTAGTa.
EV526187       <-- CTCATGAGGTTCAGGAAGCGGAGTGATTGAAGTGTTAGAGTCTGTAGTGC
EW726260       <-- CTCATGAGGTTCAGGAAGCGGAGTGATTGATGTATTAGAGTCTGTAGTa.
EV530731       --> ..................................................
FD967436       --> ..................................................
EW729854       --> ..................................................
EX899221       --> ..................................................

               1051   -   1101
UN14578        --> CTGCTACTGTTCTTCCCAACCACGGTAACATGAACACAACACGACCATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754445       <-- ..................................................
EX894983       <-- ..................................................
EV526187       <-- CTGCTACTGTTCTTCCCAACCACGGTAACATGAACACAACACGACCATCC
EW726260       <-- ..................................................
EV530731       --> ..................................................
FD967436       --> ..................................................
EW729854       --> ..................................................
EX899221       --> ..................................................

               1101   -   1151
UN14578        --> TTAGTTTTCGGGACTATCAACC
                   ~~~~~~~~~~~~~~~~~~~~~~
EX754445       <-- ......................
EX894983       <-- ......................
EV526187       <-- TTAGTTTTCGGGACTATCAACC
EW726260       <-- ......................
EV530731       --> ......................
FD967436       --> ......................
EW729854       --> ......................
EX899221       --> ......................