1      -     51
UN14582        --> TTTTTCAAGAATCATAAAAGGAAAAGAGGGAGACAGAGATTCATAAATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545489       <-- .....CAAGAATCGTAAAAGGAAAAGAGAGAGACAGAGATTCATAAATAA
EW727106       <-- .....CAAGAATCATAAAAGGAAAAGAGGGAGACAGAGATTCATAAATAA
EW727404       <-- .....CAAGAATCATAAAAGGAAAAGAGGGAGACAGAGATTCATAAATAA
FD574494       <-- ..................................................
EY934607       <-- ..................................................
EX765856       --> TTTTTCAAGAATCATAAAAGGAAAAGAG--AGACAGAGATTCATAAATAA
EY938473       --> TTTTTCAAGAATCATAAAAGGAAAAGAGGGAGACAGAGATTCATAAATAA
FD979880       --> TTTTTCAAGAATCATAAAAGGAAAAGAGAGAGACAGAGATTCATAAATAA
EV550149       --> .....CAAGAATCGTAAAAGGAAAAGAGAGAGACAGAGATTCATAAATAA
EW722454       --> .....CAAGAATCATAAAAGGAAAAGAGGGAGACAGAGATTCATAAATAA
EW722543       --> .....CAAGAATCATAAAAGGAAAAGAGGGAGACAGAGATTCATAAATAA
EW722684       --> .....CAAGAATCATAAAAGGAAAAGAGGGAGACAGAGATTCATAAATAA
EW724469       --> ......................AAAGAGGGAGACAGAGATTCATAAATAA

               51     -    101
UN14582        --> ATAAAAAATGGCGATCGTTGGTCCTCAATTTTGTGCACCGTACCCGGTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545489       <-- ATAAAAAATGGCGATCGTGGGTCCTCAATTTTGCGCACCGTACCCAGTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727106       <-- ATAAAAAATGGCGATCGTTGGTCCTCAATTTTGTGCACCGTACCCGGTAG  Raphanus sativus cv Early Scarlet Globe
EW727404       <-- ATAAAAAATGGCGATCGTTGGTCCTCAATTTTGTGCACCGTACCCGGTAG  Raphanus sativus cv Early Scarlet Globe
FD574494       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY934607       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX765856       --> ATAAAAAATGGCGATCGTGGGTCCTCAATTTTGCGCACCGTACCCAGTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938473       --> ATAAAAAATGGCGATCGTTGGTCCTCAATTTTGTGCACCGTACCCGGTAG  Raphanus sativus cv Early Scarlet Globe
FD979880       --> ATAAAAAATGGCGATCGTGGGTCCTCAATTTTGCGCACCGTACCCAGTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550149       --> ATAAAAAATGGCGATCGTGGGTCCTCAATTTTGCGCACCGTACCCAGTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW722454       --> ATAAAAAATGGCGATCGTTGGTCCTCAATTTTGTGCACCGTACCCGGTAG  Raphanus sativus cv Early Scarlet Globe
EW722543       --> ATAAAAAATGGCGATCGTTGGTCCTCAATTTTGTGCACCGTACCCGGTAG  Raphanus sativus cv Early Scarlet Globe
EW722684       --> ATAAAAAATGGCGATCGTTGGTCCTCAATTTTGTGCACCGTACCCGGTAG  Raphanus sativus cv Early Scarlet Globe
EW724469       --> ATAAAAAATGGCGACCGTTGGTCCTCAATTTTGTGCACCGTACCCGGTAG  Raphanus sativus cv Early Scarlet Globe

               101    -    151
UN14582        --> ATTTGGGTATTGTACGTAAGGTGATGACAATAACAGATGGTAACTTTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545489       <-- ATTTGGGTATCGTACGTAAGGTGATGACAATAACAGACGGTAACTTCGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727106       <-- ATTTGGGTATTGTACGTAAGGTGATGACAATAACAGATGGTAACTTTGCT  Raphanus sativus cv Early Scarlet Globe
EW727404       <-- ATTTGGGTATTGTACGTAAGGTGATGACAATAACAGATGGTAACTTTGCT  Raphanus sativus cv Early Scarlet Globe
FD574494       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY934607       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX765856       --> ATTTGGGTATCGTACGTAAGGTGATGACAATAACAGACGGTAACTTCGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938473       --> ATTTGGGTATTGTACGTAAGGTGATGACAATAACAGATGGTAACCTTGCT  Raphanus sativus cv Early Scarlet Globe
FD979880       --> ATCTGGGTATCGTACGTAAGGTGATGACAATAACAGACGGTAACTTCGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550149       --> ATTTGGGTATCGTACGTAAGGTGATGACAATAACAGACGGTAACTTCGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW722454       --> ATTTGGGTATTGTACGTAAGGTGATGACAATAACAGATGGTAACTTTGCT  Raphanus sativus cv Early Scarlet Globe
EW722543       --> ATTTGGGTATTGTACGTAAGGTGATGACAATAACAGATGGTAACTTTGCT  Raphanus sativus cv Early Scarlet Globe
EW722684       --> ATTTGGGTATTGTACGTAAGGTGATGACAATAACAGATGGTAACTTTGCT  Raphanus sativus cv Early Scarlet Globe
EW724469       --> ATTTGGGTATTGTACGTAAGGTGATGACAATAACAGATGGTAACTTTGCT  Raphanus sativus cv Early Scarlet Globe

               151    -    201
UN14582        --> GTCACTGACGTCAATGGAAACCTCCTTTTCAAAGTGAAAGAACCATTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545489       <-- GTCACTGACGTCAACGGAAACCTCCTTTTCAAAGTGAAAGAACCATTGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727106       <-- GTCACTGACGTCAATGGAAACCTCCTTTTCAAAGTGAAAGAACCATTGTT  Raphanus sativus cv Early Scarlet Globe
EW727404       <-- GTCACTGACGTCAATGGAAACCTCCTTTTCAAAGTGAAAGAACCATTGTT  Raphanus sativus cv Early Scarlet Globe
FD574494       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY934607       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX765856       --> GTCACTGACGTCAACGGAAACCTCCTTTTCAAAGTGAAAGAACCATTGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938473       --> GTCACTGACGTCAATGGAAACCTCCTTTTCAAAGTGAAAGAACCATTGTT  Raphanus sativus cv Early Scarlet Globe
FD979880       --> GTCACTGACGTCAACGGAAACCTCCTTTTCAAAGTGAAAGAACCATTGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550149       --> GTCACTGACGTCAACGGAAACCTCCTTTTCAAAGTGAAAGAACCATTGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW722454       --> GTCACTGACGTCAATGGAAACCTCCTTTTCAAAGTGAAAGAACCATTGTT  Raphanus sativus cv Early Scarlet Globe
EW722543       --> GTCACTGACGTCAATGGAAACCTCCTTTTCAAAGTGAAAGAACCATTGTT  Raphanus sativus cv Early Scarlet Globe
EW722684       --> GTCACTGACGTCAATGGAAACCTCCTTTTCAAAGTGAAAGAACCATTGTT  Raphanus sativus cv Early Scarlet Globe
EW724469       --> GTCACTGACGTCA-TGGAAACCTCCTTTTCAAAGTGAAAGAACCATTGTT  Raphanus sativus cv Early Scarlet Globe

               201    -    251
UN14582        --> TAGCCTCTCCGACAAAAGGATCTTACTTGATGCTTCAGACAATCCGATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545489       <-- TAGCCTCTCCGACAAAAGGATCTTACTTGATGCTTCAGACAATCCGATTC
EW727106       <-- TAGCCCCTCCGACAAAAGGATCTTACTTGATGCTTCAGACAATCCGATTC
EW727404       <-- TAGCCCCTCCGACAAAAGGATCTTACTTGATGCTTCAGACAATCCGATTC
FD574494       <-- ..................................................
EY934607       <-- ..................................................
EX765856       --> TAGCCTCTCCGACAAAAGGATCTTACTTGATGCTTCAGACAATCCGATTC
EY938473       --> TAGCCTCTCCGACAAAAGGATCTTACTTGATGCTTCAGACAATCCGATTC
FD979880       --> TAGCCTCTCCGACAAAAGGATCTTACTTGATGCTTCAGACAATCCGATTC
EV550149       --> TAGCCTCTCCGACAAAAGGATCTTACTTGATGCTTCAGACAATCCGATTC
EW722454       --> TAGCCCCTCCGACAAAAGGATCTTACTTGATGCTTCAGACAATCCGATTC
EW722543       --> TAGCCCCTCCGACAAAAGGATCTTACTTGATGCTTCAGACAATCCGATTC
EW722684       --> TAGCCTCTCCGACAAAAGGATCTTACTTGATGCTTCAGACAATCCGATTC
EW724469       --> TAGCCTCTCCGACAAAAGGATCTTACTTGATGCTTCAGACAATCCGATTC

               251    -    301
UN14582        --> TGACCTTGAGAGAAAATAGGGTGAGCCTGCACGATAGGTGGCAAGTATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545489       <-- TGACCTTGAGAGAAAATAGGGTGAGCCTGCACGATAGGTGGCAAGTATTT
EW727106       <-- TGACCTTGAGAGAAAATAGGGTGAGCCTGCACGATAGGTGGCAAGTATTT
EW727404       <-- TGACCTTGAGAGAAAATAGGGTGAGCCTGCACGATAGGTGGCAAGTATTT
FD574494       <-- ..................................................
EY934607       <-- ..................................................
EX765856       --> CGACCTTGAGAGAAAATAGGGTGAGCCTGCACGATAGGTGGCAAGTATTT
EY938473       --> TGACCTTGAGAGAAAATAGGGTGAGCCTGCACGATAGGTGGCAAGTATTT
FD979880       --> TGACCTTGAGAGAAAATAGGGTGAGCCTGCACGATAGGTGGCAGGTATTT
EV550149       --> TGACCTTGAGAGAAAATAGGGTGAGCCTGCACGATAGGTGGCAAGTATTT
EW722454       --> TGACCTTGAGAGAAAATAGGGTGAGCCTGCACGATAGGTGGCAAGTATTT
EW722543       --> TGACCTTGAGAGAAAATAGGGTGAGCCTGCACGATAGGTGGCAAGTATTT
EW722684       --> TTACCTTGAGAGAAAATAGGGTGAGCCTGCACGATAGGTGGCAAGTATTT
EW724469       --> TGACCTTGAGAGAAAATAGGGTGAGCCTGCACGATAGGTGGCAAGTATTT

               301    -    351
UN14582        --> AGAGGAAAGAGCACAGACCAAAATGATTTGGTGTTCACGTTGAAACGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545489       <-- AGAGGAAAGAGCACAGACCAAAATGATTTGGTGTTCACGTTGAAACGATC
EW727106       <-- AGAGGAAAGAGCACAGACCAAAATGATTTGGTGTTCACGTTGAAACGATC
EW727404       <-- AGAGGAAAGAGCACAGACCAAAATGATTTGGTGTTCACGTTGAAACGATC
FD574494       <-- ..................................................
EY934607       <-- ..................................................
EX765856       --> AGAGGAAAGAGCACAGACCAAAATGATTTGGTGTTCACGTTGAAACGATC
EY938473       --> AGAGTAAAGAGCACAGACCAAAATGATTTGGTGTTCACGTTGAAACGATC
FD979880       --> AGAGGAAAGAGCACAGACCAGAATGATTTGGTGTTCACGTTGAAACGATC
EV550149       --> AGAGGAAAGAGCACAGACCAAAATGATTTGGTGTTCACGTTGAAACGATC
EW722454       --> AGAGGAAAGAGCACAGACCAAAATGATTTGGTGTTCACGTTGAAACGATC
EW722543       --> AGAGGAAAGAGCACAGACCAAAATGATTTGGTGTTCACGTTGAAACGATC
EW722684       --> AGAGGAAAGAGCACAGACCAAAATGATTTGGTGTTCACGTTGAAACGATC
EW724469       --> AGAGGAAAGAGCACAGACCAAAATGATTTGGTGTTCACGTTGAAACGATC

               351    -    401
UN14582        --> GTCAATGATTCAA-C-TGATTAAGCCAAAACTAGATGTGTTTTTGGCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545489       <-- GTCAATGATTCAA-C-TGATTAAGCCAAAACTAGATGTGTTTTTGGCTCA
EW727106       <-- GTCAATGATTCAA-C-TGATTAAGCCAAAACTAGATGTGTTTTTGGCTCA
EW727404       <-- GTCAATGATTCAA-C-TGATTAAGCCAAAACTAGATGTGTTTTTGGCTCA
FD574494       <-- ..................................................
EY934607       <-- ..................................................
EX765856       --> GTCAATGATTCAAACATGATTAAGCCAAAACTAGATGTGTTTTTGGCTCA
EY938473       --> GTCAATGATTCAA-C-TGATTAAGCCAAAACTAGATGTGTTTTTGGCTCA
FD979880       --> GTCAATGATTCAAACATGATTAAGCCAAAACTAGATGTGTTTTTGGCTCA
EV550149       --> GTCAATGATTCAA-C-TGATTAAGCCAAAACTAGATGTGTTTTTGGCTCA
EW722454       --> GTCAATGATTCAA-C-TGATTAAGCCAAAACTAGATGTGTTTTTGGCTCA
EW722543       --> GTCAATGATTCAA-C-TGATTAAGCCAAAACTAGATGTGTTTTTGGCTCA
EW722684       --> GTCAATGATTCAA-C-TGATTAAACCAAAACTAGATGTGTTTTTGGCTCA
EW724469       --> GTCAATGATTCAA-C-TGATTAAGCCAAAACTAGATGTGTTTTTGGCTCA

               401    -    451
UN14582        --> AAACAAGGAAATGAAGGTATGCGACTTCCATGTTAAAGGAAGTTGGATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545489       <-- AAACAAGGAAATGAAGGTATGCGACTTCCATGTTAAAGGAAGTTGGATCG
EW727106       <-- AAACAAGGAAATGAAGGTATGCGACTTCCATGTTAAAGGAAGTTGGATCG
EW727404       <-- AAACAAGGAAATGAAGGTATGCGACTTCCATGTTAAAGGAAGTTGGATCG
FD574494       <-- ..................................................
EY934607       <-- ..................................................
EX765856       --> AAACAAGGAAATGAAGGTATGCGACTTCCATGTTAAAGGAAGTTGGATCG
EY938473       --> AAACAAGGAAATGAAGGTATGCGACTTCCATGTTAAAGGAAGTTGGATCG
FD979880       --> AAACAAGGAAATGAAGGTATGCGACTTCCATGTTAAAGGAAGTTGGATCG
EV550149       --> AAACAAGGAAATGAAGGTATGCGACTTCCATGTTAAAGGAAGTTGGATCG
EW722454       --> AAACAAGGAAATGAAGGTATGCGACTTCCATGTTAAAGGAAGTTGGATCG
EW722543       --> AAACAAGGAAATGAAGGTATGCGACTTCCATGTTAAAGGAAGTTGGATCG
EW722684       --> AAACAAGGAAATGAAGGTATGCGACTTCCACGTTAAAGGAAGTTGGATCG
EW724469       --> AAACAAGGAAATGAAGGTATGCGACTTCCATGTTAAAGGAAGTTGGATCG

               451    -    501
UN14582        --> ACCGGTCATGTGTCGTCTACGCGGGGAAATCTGATGCCATTGTTGCTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545489       <-- ACCGGTCATGTGTCGTTTACGCCGGGAAATCTGATGCCATTGTTGCTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727106       <-- ACCGGTCATGTGTCGTCTACGCGGGGAAATCTGATGCCATTGTTGCTCAG  Raphanus sativus cv Early Scarlet Globe
EW727404       <-- ACCGGTCATGTGTCGTCTACGCGGGGAAATCTGATGCCATTGTTGCTCAG  Raphanus sativus cv Early Scarlet Globe
FD574494       <-- ....................GCGGGGAAATTTGATGCCATTGTTGGTCAG  Raphanus sativus cv Early Scarlet Globe
EY934607       <-- ....................................CCATTGTTGCTCAG  Raphanus sativus cv Early Scarlet Globe
EX765856       --> ACCGGTCATGTGTCGTCTACGCCGGGAAATCTGATGCCATTGTTGCTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938473       --> ACCGGTCATGTGTCGTCTACGCGGGGAAATCTGATGCCATTGTTGCTCAG  Raphanus sativus cv Early Scarlet Globe
FD979880       --> ACCGGTCATGTGTCGTCTACGCCGGGAAATCTGATGCCATTGTTGCTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550149       --> ACCGGTCATGTGTCGTCTACGCCGGGAAATCTGATGCCATTGTTGCTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW722454       --> ACCGGTCATGTGTCGTCTACGCGGGGAAATCTGATGCCATTGTTGCTCAG  Raphanus sativus cv Early Scarlet Globe
EW722543       --> ACCGGTCATGTGTCGTCTACGCGGGGAAATCTGATGCCATTGTTGCTCAG  Raphanus sativus cv Early Scarlet Globe
EW722684       --> ACCGGTCATGTGTCGTCTACGCGGGGAAATCTGATGCCATTGTTGCTCAG  Raphanus sativus cv Early Scarlet Globe
EW724469       --> ACCGGTCATGTGTCGTCTACGCGGGGAAATCTGATGCCATTGTTGCTCAG  Raphanus sativus cv Early Scarlet Globe

               501    -    551
UN14582        --> ATGCACAAAAACCATACCGCACAAAGCATATTAATAGGAAAGAGTAACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545489       <-- ATGCACAAAAACCATACCGCACAAAGCATATTAATAGGAAAGAGTAACTT
EW727106       <-- ATGCACAAAAACCATACCGCACAAAGCATATTAATAGGAAAGAGTAACTT
EW727404       <-- ATGCACAAAAACCATACCGCACAAAGCATATTAATAGGAAAGAGTAACTT
FD574494       <-- ATGCACAAAAACCATACCGCACAAAGCATATTAATAGGAAAGAGTAACTT
EY934607       <-- ATGCACAAAAACCATACCGCACAAAGCATATTAATAGGAAAGAGTAACTT
EX765856       --> ATGCACAAAAACCATACCGCACAAAGCATATTAATAGGAAAGAGTAACTT
EY938473       --> ATGCACAAAAACCATACCGCACAAAGCATATTAATAGGAAAGAGTAACTT
FD979880       --> ATGCACAAAAACCATACCGCACAAAGCATATTAATAGGAAAGAGTAACTT
EV550149       --> ATGCACAAAAACCATACCGCACAAAGCATATTAATAGGAAAGAGTAACTT
EW722454       --> ATGCACAAAAACCATACCGCACAAAGCATATTAATAGGAAAGAGTAACTT
EW722543       --> ATGCACAAAAACCATACCGCACAAAGCATATTAATAGGAAAGAGTAACTT
EW722684       --> ATGCACAAAAACCATACCGCACAAAGCATATTAATAGGAAAGAGTAACTT
EW724469       --> ATGCACAAAAACCATACCGCACAAAGCATATTAATAGGAAAGAGTAACTT

               551    -    601
UN14582        --> CTCGGTCACTGTTTATCCGAATGTCGATTATGCGTTTATAGTATCTCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545489       <-- CTCGGTCACTGTTTATCCGAATGTCGATTATGCGTTTATAGTATCCCTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727106       <-- CTCGGTCACTGTTTATCCGAATGTCGATTATGCGTTTATAGTATCTCTCA  Raphanus sativus cv Early Scarlet Globe
EW727404       <-- CTCGGTCACTGTTTATCCGAATGTCGATTATGCGTTTATAGTATCTCTCA  Raphanus sativus cv Early Scarlet Globe
FD574494       <-- TTCGGTCACTGTTTATCCGAATGTCGATTATGCGTTTATAGTATCTCTCA  Raphanus sativus cv Early Scarlet Globe
EY934607       <-- CTCGGTCACTGTTTATCCGAATGTCAATTATGCGTTTATAGTATCTCTCA  Raphanus sativus cv Early Scarlet Globe
EX765856       --> CTCGGTCACTGTTTATCCGAATGTCGATTATGCGTTTATAGTATCCCTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938473       --> CTCGGTCACTGTTTATCCGAATGTCAATTATGCGTTTATAGTATCTCTCA  Raphanus sativus cv Early Scarlet Globe
FD979880       --> CTCGGTCACTGTTTATCCGAATGTCGATTATGCGTTTATAATATCCCTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550149       --> CTCGGTCACTGTTTATCCGAATGTCGATTATGCGTTTATAGTATCCCTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW722454       --> CTCGGTCACTGTTTATCCGAATGTCGATTATGCGTTTATAGTATCTCTCA  Raphanus sativus cv Early Scarlet Globe
EW722543       --> CTCGGTCACTGTTTATCCGAATGTCGATTATGCGTTTATAGTATCTCTCA  Raphanus sativus cv Early Scarlet Globe
EW722684       --> CTCGGTCACTGTTTATCCGAATGTCGATTATGCGTTTATAGTATCTCTCA  Raphanus sativus cv Early Scarlet Globe
EW724469       --> CTCGGTCACTGTTTATCCGAATGTCGATTATGCGTTTATAGTATCTCTCA  Raphanus sativus cv Early Scarlet Globe

               601    -    651
UN14582        --> TTGTAATTCTCGATGACATTAACCGAGAAGATTCTGATGACTAAACTAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545489       <-- TTGTAATTCTCGATGACATTAACCGAGAAGATTCTGATGACTAAACTAAT
EW727106       <-- TTGTAATTCTCGATGACATTAACCGAGAAGATTCTGATGACTAAACTAAT
EW727404       <-- TTGTAATTCTCGATGACATTAACCGAGAAGATTCTGATGACTAAACTAAT
FD574494       <-- TTGTAATTCTCGATGACATTAACCGAGAAGATTTTGATGACTAAACTAAT
EY934607       <-- TTGTAATTCTCGATGACATTAACCGAGAAGATTCTGATGACTAAACTAAT
EX765856       --> TTGTAATTCTCGATGACATTAACCGAGAAGATTCTGATGACTAAACTAAT
EY938473       --> TTGTAATTCTCGATGACATTAACCGAGAAGATTCTGATGACTAAACTAAT
FD979880       --> TTGTAATTCTCGATGACATTAACCGAGAAGATTCTGATGACTAAACTAAT
EV550149       --> TTGTAATTCTCGATGACATTAACCGAGAAGATTCTGATGACTAAACTAAT
EW722454       --> TTGTAATTCTCGATGACATTAACCGAGAAGATTCTGATGACTAAACTAAT
EW722543       --> TTGTAATTCTCGA.....................................
EW722684       --> TTGTAATTCTCGATGACATTAACCGAGAAGATTCTGATGACTAAACTAAT
EW724469       --> TTGTAATTCTCGATGACATTAACCGAGAAGATTCTGATGACTAAACTAAT

               651    -    701
UN14582        --> GTTTTTTCAACTAATGATTCTTGATTTTAATATGAAACAAGAATTCATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545489       <-- GCTTTTT-AACTAATGATTCTTGATTTTAATATGAAATAAGAATTAATG.  Raphanus raphanistrum subsp. raphanistrum (NY)
EW727106       <-- GTTTTTTCAACTAATGATTCTTGATTTTAATATGAAACAAGAATTCATGA  Raphanus sativus cv Early Scarlet Globe
EW727404       <-- GTTTTTTCAACTAATGATTCTTGATTTTAATATGAAACAAGAATTCATGA  Raphanus sativus cv Early Scarlet Globe
FD574494       <-- GTTTTTTCAACTAATGATTCTTGATTTTAATATGAAACAAGAATTCATGA  Raphanus sativus cv Early Scarlet Globe
EY934607       <-- GTTTTTTCAACTAATGATTCTTGATTTTAATATGAAACAAGAATTCATGA  Raphanus sativus cv Early Scarlet Globe
EX765856       --> GCTTTTTa..........................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938473       --> GTTTTTTCAACTAATGATTCTTGATTTTAATATGAAACAAGAATTCATGA  Raphanus sativus cv Early Scarlet Globe
FD979880       --> GCTTTT--AACTAATGATct..............................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550149       --> GCTTTTT-AACTAATGATTCTTGATTTTAATATGAAATAAGAATTAATG.  Raphanus raphanistrum subsp. raphanistrum (NY)
EW722454       --> GTTTTTTCAACTAATGATTCTTGATTTTAATATGAAACAAGAATTCATGA  Raphanus sativus cv Early Scarlet Globe
EW722543       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW722684       --> GTTTTTTCAACTAATGATTCTTGATTTTAATATGAAACAAGAATTCATGA  Raphanus sativus cv Early Scarlet Globe
EW724469       --> GTTTTTTCAACTAATGATTCTTGATTTTAta...................  Raphanus sativus cv Early Scarlet Globe

               701    -    751
UN14582        --> GAGTGTTGAGGTTTTGTTTGGATATGAATACAATTCTCTCTGTCTCGACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545489       <-- ..................................................
EW727106       <-- GAGTGTTGAGGTTTTGTTTGGATATGAATACAATTCTCTCTGTCTCGACA
EW727404       <-- GAGTGTTGAGGTTTTGTTTGGATATGAATACAATTCTCTCTGTCTCGACA
FD574494       <-- GAGTGTTGAGGTTTT-TTTGGATATGAATACAATTCTTTCTGTCTCGACA
EY934607       <-- GAGTGTTGAGGTTTTGTTTGGATATGAATACAATTCTCTCTGTCTCGACA
EX765856       --> ..................................................
EY938473       --> GAGTGTTGAGGTTT-GTTTGGATATGAATACA..................
FD979880       --> ..................................................
EV550149       --> ..................................................
EW722454       --> GAGTGTTGAGGTTTTGTTTGGATATGAATACAATTCTCTCTGTCTCGACA
EW722543       --> ..................................................
EW722684       --> GAGTGTTGAGGTTTTGTTTGGATATGAATACAATTCTCTCTGTCTCGACA
EW724469       --> ..................................................

               751    -    801
UN14582        --> GAGGATTATTGAACACAGTTTCAAGTTTATTCAGTTCCTTGAATAAGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545489       <-- ..................................................
EW727106       <-- GAGGAT............................................
EW727404       <-- GAGGATTATTGAACgc..................................
FD574494       <-- GAGGATTATTGAACACAGTTTCA...........................
EY934607       <-- GAGGATTACTGAACACAGTTTCAAGTTTATTCAGTTCCTTGAATAAGCAA
EX765856       --> ..................................................
EY938473       --> ..................................................
FD979880       --> ..................................................
EV550149       --> ..................................................
EW722454       --> GAGGATTATTGAACgcaa................................
EW722543       --> ..................................................
EW722684       --> GAG-ATTATTGAACACAGTTTCAAGT........................
EW724469       --> ..................................................

               801    -    851
UN14582        --> TCGATTGTACT
                   ~~~~~~~~~~~
EV545489       <-- ...........
EW727106       <-- ...........
EW727404       <-- ...........
FD574494       <-- ...........
EY934607       <-- TCGATTGTACT
EX765856       --> ...........
EY938473       --> ...........
FD979880       --> ...........
EV550149       --> ...........
EW722454       --> ...........
EW722543       --> ...........
EW722684       --> ...........
EW724469       --> ...........