RadishBase

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Alignment for radish unigene UN14590

               1      -     51
UN14590        --> GGAATTGAAAAACAAGAGATCAAATTGCATGAATCTAATTGATACAGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY897387       <-- GGAATTGAAAAACAAGAGATCAAATTGCATGAATCTAATTGATACAGTCA
EY948390       <-- ..................................................
EY946962       <-- ..................................................
FD540307       <-- ..................................................
FD580415       <-- ..................................................
EV566887       <-- ..................................................
EX746474       <-- ..................................................
EX906348       <-- ..................................................
FD572224       <-- ..................................................
EY908483       <-- ..................................................
EX906099       <-- ..................................................
EY944103       --> ..................................................
EY942956       --> ..................................................
EX769316       --> ..................................................
EX909721       --> ..................................................
FD584211       --> ..................................................
EV571915       --> ..................................................
EX769506       --> ..................................................
EX909900       --> ..................................................
FD575904       --> ..................................................
FY437115       --> ..................................................
EY904168       --> ..................................................

               51     -    101
UN14590        --> ATAAAAGACGATAGGGTAAGAGATTTGCAAATTGAAGAGGCAAAAGAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY897387       <-- ATAAAAGACGATAGGGTAAGAGACTTGCAAATTGAAGAGGCAAAAGAAAT
EY948390       <-- ..........tttGGGTAAGAGATTTGCAAATTGAAGAGGCAAAAGAAAT
EY946962       <-- .............gaGTAAGAGATTTGCAAATTGAAGAGGCAAAAGAAAT
FD540307       <-- ....................................GAGGCAAAAGAAAT
FD580415       <-- .....................................AGGCAAAAGAAAT
EV566887       <-- .................................................T
EX746474       <-- .............................................ttttT
EX906348       <-- ..................................................
FD572224       <-- ..................................................
EY908483       <-- ..................................................
EX906099       <-- ..................................................
EY944103       --> .............GGGTAAGAGATTTGCAAATTGAAGAGGCAAAAGAAAT
EY942956       --> .........................TGCAAATTGAAGAGGCAAAAGAAAT
EX769316       --> .....................................AGGCAAAAGAAAT
EX909721       --> .....................................AGGCAAAAGAAAT
FD584211       --> .....................................AGGCAAAAGAAAT
EV571915       --> .................................................T
EX769506       --> ..................................................
EX909900       --> ..................................................
FD575904       --> ..................................................
FY437115       --> ..................................................
EY904168       --> ..................................................

               101    -    151
UN14590        --> TTCATCCAAGTTCAAATCTTTTTATAAAAAAGTAAACAACACACCGAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY897387       <-- TTCATCCAAGTTCAAAACTTTTTTATAACAAGTAAACAACACAACGAAAG  Raphanus raphanistrum subsp. maritimus
EY948390       <-- TTCATCCAAGTTCAAATCTTTTTATAAAAAAGTAAACAACACACCGAGAG  Raphanus sativus cv Rat-Tail Radish #3870
EY946962       <-- TTCATCCAAGTTCAAATCTTTTTATAAAAAAGTAAACAACACACCGAGAG  Raphanus sativus cv Rat-Tail Radish #3870
FD540307       <-- TTCATCCAAGTTCAAAACTTTTTTATAACAAGTAAACAACACACCGAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD580415       <-- TTCATCCAAGTTCAAATCTTTTTATAAAAA-GTAAACAACACACCGAGAG  Raphanus sativus cv Rat-Tail Radish #3870
EV566887       <-- TTCATCCAAGTTCAAAACTTTTTTATAATAAGTAAACAACACAACGAAAG  Raphanus raphanistrum subsp. landra
EX746474       <-- TTCATCCAAGTTCGAAACTTTT-ATAAAAA-GTAAACAACACACCGAAAG  Raphanus raphanistrum subsp. maritimus
EX906348       <-- ..CATCCAAGTTCAAATCTTTTTATAAAAAAGTAAACAACACACCGAGAG  Raphanus sativus cv Rat-Tail Radish #3870
FD572224       <-- ..cgTCCAAGTTCAAATCTTTTTATAAAAAAGTAAACAACACACCGAGAG  Raphanus sativus cv Early Scarlet Globe
EY908483       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX906099       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY944103       --> TTCATCCAAGTTCAAATCTTTTTATAAAAAAGTAAACAACACACCGAGAG  Raphanus sativus cv Rat-Tail Radish #3870
EY942956       --> TTCATCCAAGTTCAAATCTTTTTATAAAAAAGTAAACAACACACCGAGAG  Raphanus sativus cv Rat-Tail Radish #3870
EX769316       --> TTCATCCAAGTTCAAAT-TTTTTATAAAAAAGTAAACAACACACCGAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909721       --> TTCATCCAAGTTCAAAT-TTTTTATAAAAAAGTAAACAACACACCGAGAG  Raphanus sativus cv Rat-Tail Radish #3870
FD584211       --> TTCATCCAAGTTCAAATCTTTTTATAAAAA-GTAAACAACACACCGAGAG  Raphanus sativus cv Rat-Tail Radish #3870
EV571915       --> TTCATCCAAGTTCAAAACTTTTTTATAATAAGTAAACAACACAACGAAAG  Raphanus raphanistrum subsp. landra
EX769506       --> ..CATCCAAGTTCAAATCTTTTTATAAAAAAGTAAACAACACACCGAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909900       --> ..CATCCAAGTTCAAATCTTTTTATAAAAAAGTAAACAACACACCGAGAG  Raphanus sativus cv Rat-Tail Radish #3870
FD575904       --> ..cgTCCAAGTTCAAATCTTTTTATAAAAAAGTAAACAACACACCGAGAG  Raphanus sativus cv Early Scarlet Globe
FY437115       --> ...cTCCAAGTTCAAACTTTTTTATAA-CAAGTAAACAACACAACGAAAG  Raphanus sativus cv GSK3-1
EY904168       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               151    -    201
UN14590        --> ATATTACTAATCAAATGATCAATAATAGTTGTAGTACTGCGAACAAACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY897387       <-- ATATTACTAATCAAATGATCAATAATAGTTGTAGTACTGCGAACAAACTC
EY948390       <-- ATATTACTAATCAAATGATCAATAATAGTTGTAGTACTGCGAACAAACTC
EY946962       <-- ATATTACTAATCAAATGATCAATAATAGTTGTAGTACTGCGAACAAACTC
FD540307       <-- ATATTACTAATCAAATGATCAATAACAGTTGTAGTACTGCGAACAAACTC
FD580415       <-- ATATTACTAATCAAATGATCAATAATAGTTGTAGTACTGCGAACAAACTC
EV566887       <-- ATATTACTAATCAAATGATCAATAATAGTTGTAGTACTGCGAACAAACTC
EX746474       <-- ATATTACTAATCAAATGATCAATAATAGTTGTAGTACTGCGAACAAACTC
EX906348       <-- ATATTACTAATCAAATGATCAATAATAGTTGTAGTACTGCGAACAAACTC
FD572224       <-- ATATTACTAATCAAATGATCAATAATAGTTGTAGTACTGCGAACAAACTC
EY908483       <-- ..................................................
EX906099       <-- ..................................................
EY944103       --> ATATTACTAATCAAATGATCAATAATAGTTGTAGTACTGCGAACAAACTC
EY942956       --> ATATTACTAATCAAATGATCAATAATAGTTGTAGTACTGCGAACAAACTC
EX769316       --> ATATTACTAATCAAATGATCAATAATAGTTGTAGTACTGCGAACAAACTC
EX909721       --> ATATTACTAATCAAATGATCAATAATAGTTGTAGTACTGCGAACAAACTC
FD584211       --> ATATTACTAATCAAATGATCAATAATAGTTGTAGTACTGCGAACAAACTC
EV571915       --> ATATTACTAATCAAATGATCAATAATAGTTGTAGTACTGCGAACAAACTC
EX769506       --> ATATTACTAATCAAATGATCAATAATAGTTGTAGTACTGCGAACAAACTC
EX909900       --> ATATTACTAATCAAATGATCAATAATAGTTGTAGTACTGCGAACAAACTC
FD575904       --> ATATTACTAATCAAATGATCAATAATAGTTGTAGTACTGCGAACAAACTC
FY437115       --> ATATTACTAATCAAATGATCAATAATAGTTGTAGTACTGCGAACAAACTC
EY904168       --> ..................................................

               201    -    251
UN14590        --> AGAA-GCCAAAAACTAAGTTTTAACTCTTTT-CCCTGCGAATACTCAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY897387       <-- AGAA-GCCAAAAACTAAGTTTTAACTCTTTT-CCCTGCGAATACTCAAAC
EY948390       <-- AGAA-GCCAAAAACTAAGTTTTAACTCTTTT-CCCTGCGAATACTCAAAC
EY946962       <-- AGAA-GCCAAAAACTAAGTTTTAACTCTTTT-CCCTGCGAATACTCAAAC
FD540307       <-- AGAAAGCCAAAAACTAAGTTTTAACTCTTTC-CCCTGCGAATACTCGAAC
FD580415       <-- AGAA-GCCAAAAACTAAGTTTTAACTCTTTT-CCCTGCGAATACTCAAAC
EV566887       <-- AGAA-GCCAAAAACTAAGTTT-AACTCTTTT-CCCTGCGAATACTCAAAC
EX746474       <-- AGAA-GCCAAAAACTAAGTTTTAACTCTTTTTTCCTGCGAATACTCAAAC
EX906348       <-- AGAA-GCCAAAAACTAAGTTTTAACTCTTTT-CCCTGCGAATACTCAAAC
FD572224       <-- AGAA-GCCAAAAACTAAGTTTTAACTCTTTT-CCCTGCGAATACTCAAAC
EY908483       <-- ..................................................
EX906099       <-- ..................................................
EY944103       --> AGAA-GCCAAAAACTAAGTTTTAACTCTTTT-CCCTGCGAATACTCAAAC
EY942956       --> AGAA-GCCAAAAACTAAGTTTTAACTCTTTT-CCCTGCGAATACTCAAAC
EX769316       --> AAAA-GCCAAAAACTAAGTTTTAACTCTTTT-CCCTGCGAATACTCAAAC
EX909721       --> AGAA-GCCAAAAACTAAGTTTTAACTCTTTT-CCCTGCGAATACTCAAAC
FD584211       --> AGAA-GCCAAAAACTAAGTTTTAACTCTTTT-CCCTGCGAATACTCAAAC
EV571915       --> AGAA-GCCAAAAACTAAGTTT-AACTCTTTT-CCCTGCGAATACTCAAAC
EX769506       --> AGAA-GCCAAAAACTAAGTTTTAACTCTTTT-CCCTGCGAATACTCAAAC
EX909900       --> AGAA-GCCAAAAACTAAGTTTTAACTCTTTT-CCCTGCGAATACTCAAAC
FD575904       --> AAAA-GCCAAAAACTAAGTTTTAACTCTTTT-CCCTGCGAATACTCAAAC
FY437115       --> AGAA-GCCAAAAACTAAGTTTTAACTCTTTT-CCCTGCGAATACTCAAAC
EY904168       --> ..................................................

               251    -    301
UN14590        --> AACAGTTTAAGCTGATGAAGCCGCTCCCTTGTTCCTTGGCTTGGCTTCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY897387       <-- AACAGTTTAAGCTGATGAAGCCGCTCCCTTGTTCCTTGGCTTGGCTTCCG
EY948390       <-- AACAGTTTAAGCTGATGAAGCCGCTCACTTGTTCCTTGGCTTGGCTTCGG
EY946962       <-- AACAGTTTAAGCTGATGAAGCCGCTCCCTTGTTCCTTGGCTTGGCTTCGG
FD540307       <-- AACAGTTTAAGCTGATGAAGCCGCTCCCTTGTTCCTTGGCTTGGCTTCGG
FD580415       <-- AACAGTTTAAGCTGATGAAGCCGCTCCCTTGTTCCTTGGCTTGGCTTCGG
EV566887       <-- AACAGTTTAAGCTGATGAAGCCGCTCCCTTGTTCCTTGGCTTAGCCTCGG
EX746474       <-- AACAGTTTAATCTGATGAAGCCGCTCCCTTGTTCCTTGGCTTGGCTTCGG
EX906348       <-- AACAGTTTAAGCTGATGAAGCCGCTCCCTTGTTCCTTGGCTCGGCTTCGG
FD572224       <-- AACAGTTTAAGCTGATGAAGCCGCTCCCTTGTTCCTTGGCTTGGCTTCGG
EY908483       <-- ..................aaCCGCTCCCTTGTTCCTTGGCTTGGCTTCGG
EX906099       <-- ............................................CTTCGG
EY944103       --> AACAGTTTAAGCTGATGAAGCCGCTCACTTGTTCCTTGGCTTGGCTTCGG
EY942956       --> AACAGTTTAAGCTGATGAAGCCGCTCCCTTGTTCCTTGGCTTGGCTTCGG
EX769316       --> AACAGTTTAAGCTGATGAAGCCGCTCCCTTGTTCCTTGGCTTGGCTTCGG
EX909721       --> AACAGTTTAAGCTGATGAAGCCGCTCCCTTGTTCCTTGGCTTGGCTTCGG
FD584211       --> AACAGTTTAAGCTGATGAAGCCGCTCCCTTGTTCCTTGGCTTGGCTTCGG
EV571915       --> AACAGTTTAAGCTGATGAAGCCGCTCCCTTGTTCCTTGGCTTAGCCTCGG
EX769506       --> AACAGTTTAAGCTGATGAAGCCGCTCCCTTGTTCCTTGGCTCGGCTTCGG
EX909900       --> AACAGTTTAAGCTGATGAAGCCGCTCCCTTGTTCCTTGGCTCGGCTTCGG
FD575904       --> AACAGTTTAAGCTGATGAAGCCGCTCCCTTGTTCCTTGGCTTGGCTTCGG
FY437115       --> AACAGTTTAAGCTGATGAAGCCGCTCCCTTGTTCCTTGGCTTGGCTTCCG
EY904168       --> .....................ccCTCCCTTGTTCCTTGGCTTGGCTTCGG

               301    -    351
UN14590        --> TACCTTCTCTGAAACCGGTCTTGAACCTGCGAGGCACATTGCGGAGATAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY897387       <-- TACCTTCTCTGAAACCGGTCTTGAACCTGCGAGGCACATTGCGGAGATAC
EY948390       <-- TACCTTCTCTGAAACCGGTCTTGAACCTGCGAGGCACATTGTGGAGATAC
EY946962       <-- TACCTTCTCTGAAACCGGTCTTGAACCTGCGAGGCACATTGCGGAGATAC
FD540307       <-- TACCTTCTCTGAAACCGGTCTTGAACCTGCGAGGCACGTTGCGAAGATAC
FD580415       <-- TACCTTCTCTGAAACCGGTCTTGAACCTGCGAGGCACATTGCGGAGATAC
EV566887       <-- TACCTTCTCTGAAACCGGTCTTGAACCTGCGAGGCACATTGCGGAGATAC
EX746474       <-- TACCTTCTCTGAAACCGGTCTTGAACCTGCGAGGCACATTGCGAAGATAC
EX906348       <-- TACCTTCTCTGAAACCGGTCTTGAACCTGCGAGGCACATTGCGGAGATAC
FD572224       <-- TACCTTCTCTGAAACCGGTCTTGAACCTGCGAGGCACATTGCGGAGATAC
EY908483       <-- T-CCTTCTCTGAA-CCGGTCTTAAACCTGCGAGGCACATTGCGAAGATAC
EX906099       <-- TACCTTCTCTGAAACCGGTCTTGAACCTGCGAGGCACATTGCGGAGATAC
EY944103       --> TACCTTCTCTGAAACCGGTCTTGAACCTGCGAGGCACATTGTGGAGATAC
EY942956       --> TACCTTCTCTGAAACCGGTCTTGAACCTGCGAGGCACATTGCGGAAATAC
EX769316       --> TACCTTCTCTGAAACCGGTCTTGAACCTGCGAGGCACATTGCGGAAATAC
EX909721       --> TACCTTCTCTGAAACCGGTCTTGAACCTGCGAGGCACATTGCGGAAATAC
FD584211       --> TACCTTCTCTGAAACCGGTCTTGAACCTGCGAGGCACATTGCGGAGATAC
EV571915       --> TACCTTCTCTGAAACCGGTCTTGAACCTGCGAGGCACATTGCGGAGATAC
EX769506       --> TACCTTCTCTGAAACCGGTCTTGAACCTGCGAGGCACATTGCGGAGATAC
EX909900       --> TACCTTCTCTGAAACCGGTCTTGAACCTGCGAGGCACATTGCGGAGATAC
FD575904       --> TACCTTCTCTGAAACCGGTCTTGAACCTGCGAGGCACATTGCGGAAATAC
FY437115       --> TACCTTCTCTGAAACCGGTCTTGAACCTGCGAGGCACATTGCGGAGATAC
EY904168       --> TACCTTCTCTGAAACCGGTCTTAAACCTGCGAGGCACATTGCGAAAATAC

               351    -    401
UN14590        --> CTCATCCTTCCTGTTCCTGTAGTCTTTCTACGGATGGCCTTCACACTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY897387       <-- CTCATCCTTCCTGTTCCTGTAGTCTTTCTACGGATGGCCTTCACACTCCA  Raphanus raphanistrum subsp. maritimus
EY948390       <-- CTCATCCTTCCTGTTCCTGTAGTCTTTCTACGGATGGCCTTCACACTCCA  Raphanus sativus cv Rat-Tail Radish #3870
EY946962       <-- CTCATCCTTCCTGTTCCTGTAGTCTTTCTACGGATGGCCTTCACACTCCA  Raphanus sativus cv Rat-Tail Radish #3870
FD540307       <-- CTCATCCTTCCAGTTCCTGTAGTCTTTCTACGGATGGCCTTCACACTCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD580415       <-- CTCATCCTTCCTGTTCCTGTAGTCTTTCTACGGATGGCCTTCACACTCCA  Raphanus sativus cv Rat-Tail Radish #3870
EV566887       <-- CTCATCCTTCCAGTTCCTGTAGTCTTTCTACGGATGGCCTTCACACTCCA  Raphanus raphanistrum subsp. landra
EX746474       <-- CTCATCCTTCCTGTCCCTGTAGTCTTTCTACGGATGGCCTTCACACTCCA  Raphanus raphanistrum subsp. maritimus
EX906348       <-- CTCATCCTTCCTGTTCCTGTAGTCTTTCTACGGATGGCCTTCACACTCCA  Raphanus sativus cv Rat-Tail Radish #3870
FD572224       <-- CTCATCCTTCCTGTTCCTGTAGTCTTTCTACGGATGGCCTTCACACTCCA  Raphanus sativus cv Early Scarlet Globe
EY908483       <-- CTCA-CCTTCCAGTTCCTGTAGTCTTTCTACGGATGGCCTTCACACTCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX906099       <-- CTCATCCTTCCTGTTCCTGTAGTCTTTCTACGGATGGCCTTCACACTCCA  Raphanus sativus cv Rat-Tail Radish #3870
EY944103       --> CTCATCCTTCCTGTTCCTGTAGTCTTTCTACGGATGGCCTTCACACTCCA  Raphanus sativus cv Rat-Tail Radish #3870
EY942956       --> CTCATCCTTCCTGTTCCTGTAGTCTTTCTACGGATGGCCTTCACACTCCA  Raphanus sativus cv Rat-Tail Radish #3870
EX769316       --> CTCATCCTTCCTGTTCCTGTAGTCTTTCTACGGATGGCCTTCACACTCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909721       --> CTCATCCTTCCTGTTCCTGTAGTCTTTCTACGGATGGCCTTCACACTCCA  Raphanus sativus cv Rat-Tail Radish #3870
FD584211       --> CTCATCCTTCCTGTTCCTGTAGTCTTTCTACGGATGGCCTTCACACTCCA  Raphanus sativus cv Rat-Tail Radish #3870
EV571915       --> CTCATCCTTCCAGTTCCTGTAGTCTTTCTACGGATGGCCTTCACACTCCA  Raphanus raphanistrum subsp. landra
EX769506       --> CTCATCCTTCCTGTTCCTGTAGTCTTTCTACGGATGGCCTTCACACTCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909900       --> CTCATCCTTCCTGTTCCTGTAGTCTTTCTACGGATGGCCTTCACACTCCA  Raphanus sativus cv Rat-Tail Radish #3870
FD575904       --> CTCATCCTTCCTGTTCCTGTAGTCTTTCTACGGATGGCCTTCACACTCCA  Raphanus sativus cv Early Scarlet Globe
FY437115       --> CTCATCCTTCCTGTTCCTGTAGTCTTTCTACGGATGGCCTTCACACTCCA  Raphanus sativus cv GSK3-1
EY904168       --> CTCATCCTTCCAGTTCCTGTAGTCTTTCTACGGATGGCCTTCACACTCCA  Raphanus raphanistrum subsp. raphanistrum (MS)

               401    -    451
UN14590        --> GTTGTAGGTCCTCTTGCGAGCGGCGGGGTAAGCACAGGCGGAGCAACGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY897387       <-- GTTATAGGTCCTCTTGCGAGCGGCGGGGTAAGCACAGGCGGAGCAACGGC  Raphanus raphanistrum subsp. maritimus
EY948390       <-- GTTGTAGGTCCTCTTGCGAGCGGCGGGGTAAGCACAGGCGGAGCAACGGC  Raphanus sativus cv Rat-Tail Radish #3870
EY946962       <-- GTTGTAGGTCCTCTTGCGAGCGGCGGGGTAAGCACAGGCGGAGCAACGGC  Raphanus sativus cv Rat-Tail Radish #3870
FD540307       <-- GTTATAGGTCCTCTTGCGAGCGGCGGGGTAAGCACAGGCGGAGCAACGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD580415       <-- GTTGTAGGTCCTCTTGCGAGCGGCGGGGTAAGCACAGGCGGAGCAACGGC  Raphanus sativus cv Rat-Tail Radish #3870
EV566887       <-- ATTGTAGGTCCTCTTGCGAGCGGCGGGGTAAGCACAGGCGGAGCAACGGC  Raphanus raphanistrum subsp. landra
EX746474       <-- GTTATAGGTCCTCTTGCGAGCGGCGGGGTAAGCACAGGCGGAGCAACGGC  Raphanus raphanistrum subsp. maritimus
EX906348       <-- GTTGTAGGTCCTCTTGCGAGCGGCGGGGTAAGCACAGGCGGAGCAACGGC  Raphanus sativus cv Rat-Tail Radish #3870
FD572224       <-- GTTGTAGGTCCTCTTGCGAGCGGCGGGGTAAGCACAGGCGGAGCAACGGC  Raphanus sativus cv Early Scarlet Globe
EY908483       <-- GTTATAGGTCCTCTTGCGAGCGGCGGGGTAAGCACAGGCGGAGCAACGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX906099       <-- GTTGTAGGTCCTCTTGCGAGCGGCGGGGTAAGCACAGGCGGAGCAACGGC  Raphanus sativus cv Rat-Tail Radish #3870
EY944103       --> GTTGTAGGTCCTCTTGCGAGCGGCGGGGTAAGCACAGGCGGAGCAACGGC  Raphanus sativus cv Rat-Tail Radish #3870
EY942956       --> GTTGTAGGTCCTCTTGCGAGCGGCGGGGTAAGCACAGGCGGAGCAACGGC  Raphanus sativus cv Rat-Tail Radish #3870
EX769316       --> GTTGTAGGTCCTCTTGCGAGCGGCGGGGTAAGCACAGGCGGAGCAACGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909721       --> GTTGTAGGTCCTCTTGCGAGCGGCGGGGTAAGCACAGGCGGAGCAACGGC  Raphanus sativus cv Rat-Tail Radish #3870
FD584211       --> GTTGTAGGTCCTCTTGCGAGCGGCGGGGTAAGCACAGGCGGAGCAACGGC  Raphanus sativus cv Rat-Tail Radish #3870
EV571915       --> ATTGTAGGTCCTCTTGCGAGCGGCGGGGTAAGCACAGGCGGAGCAACGGC  Raphanus raphanistrum subsp. landra
EX769506       --> GTTGTAGGTCCTCTTGCGAGCGGCGGGGTAAGCACAGGCGGAGCAACGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909900       --> GTTGTAGGTCCTCTTGCGAGCGGCGGGGTAAGCACAGGCGGAGCAACGGC  Raphanus sativus cv Rat-Tail Radish #3870
FD575904       --> GTTGTAGGTCCTCTTGCGAGCGGCGGGGTAAGCACAGGCGGAGCAACGGC  Raphanus sativus cv Early Scarlet Globe
FY437115       --> GTTATAGGTTCTCTTGCGAGCGGCGGGGTAAGCACAGGCGGAGCAACGGC  Raphanus sativus cv GSK3-1
EY904168       --> GTTATAGGTCCTCTTGCGAGCGGCGGGGTAAGCACAGGCGGAGCAACGGC  Raphanus raphanistrum subsp. raphanistrum (MS)

               451    -    501
UN14590        --> TCTTCTGGATGTGGAAACTGCGGCGGCCACATCTCACACAGAGAGTGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY897387       <-- TCTTCTGGATGTGGAAACTGCGACGGCCACATCTCACACAGAGAGTGTGA  Raphanus raphanistrum subsp. maritimus
EY948390       <-- TCTTCTGGATGTGGAAACTGCGGCGGCCACATCTCACACAGAGAGTGTGT  Raphanus sativus cv Rat-Tail Radish #3870
EY946962       <-- TCTTCTGGATGTGGAAACTGCGGCGGCCACATCTCACACAGAGAGTGTGA  Raphanus sativus cv Rat-Tail Radish #3870
FD540307       <-- TCTTCTGGATGTGGAAACTGCGACGGCCACATCTCACACAGAGAGTGTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD580415       <-- TCTTCTGGATGTGGAAACTGCGGCGGCCACATCTCACACAGAGAGTGTGA  Raphanus sativus cv Rat-Tail Radish #3870
EV566887       <-- TCTTCTGGATGTGGAAACTGCGACGGCCACATCTCACACAGAGAGTGTGA  Raphanus raphanistrum subsp. landra
EX746474       <-- TCTTCTGGATGTGGAAACTGCGACGGCCACATCTCACACAGAGTGTGTGA  Raphanus raphanistrum subsp. maritimus
EX906348       <-- TCTTCTGGATGTGGAAACTGCGGCGGCCACATCTCACACAGAGAGTGTGA  Raphanus sativus cv Rat-Tail Radish #3870
FD572224       <-- TCTTCTGGATGTGGAAGCTGCGGCGGCCACATCTCACACAGAGAGCGTGA  Raphanus sativus cv Early Scarlet Globe
EY908483       <-- TCTTCTGGATGTGGAAACTGCGACGGCCACATCTCACACAGAGAGTGTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX906099       <-- TCTTCTGGATGTGGAAACTGAGGCGGCCACATCTCACACAGAGAGTGTGA  Raphanus sativus cv Rat-Tail Radish #3870
EY944103       --> TCTTCTGGATGTGGAAACTGCGGCGGCCACATCTCACACAGAGAGTGTGT  Raphanus sativus cv Rat-Tail Radish #3870
EY942956       --> TCTTCTGGATGTGGAAACTGCGGCGGCCACATCTCACACAGAGAGTGTGA  Raphanus sativus cv Rat-Tail Radish #3870
EX769316       --> TCTTCTGGATGTGGAAACTGAGGCGGCCACATCTCACACAGAGAGTGTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909721       --> TCTTCTGGATGTGGAAACTGAGGCGGCCACATCTCACACAGAGAGTGTGA  Raphanus sativus cv Rat-Tail Radish #3870
FD584211       --> TCTTCTGGATGTGGAAACTGCGGCGGCCACATCTCACACAGAGAGTGTGA  Raphanus sativus cv Rat-Tail Radish #3870
EV571915       --> TCTTCTGGATGTGGAAACTGCGACGGCCACATCTCACACAGAGAGTGTGA  Raphanus raphanistrum subsp. landra
EX769506       --> TCTTCTGGATGTGGAAACTGCGGCGGCCACATCTCACACAGAGAGTGTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909900       --> TCTTCTGGATGTGGAAACTGCGGCGGCCACATCTCACACAGAGAGTGTGA  Raphanus sativus cv Rat-Tail Radish #3870
FD575904       --> TCTTCTGGATGTGGAAGCTGCGGCGGCCACATCTCACACAGAGAGCGTGA  Raphanus sativus cv Early Scarlet Globe
FY437115       --> TCTTCTGGATGTGGAAACTGCGGCGGCCACATCTCACACAGAGAGTGTGA  Raphanus sativus cv GSK3-1
EY904168       --> TCTTCTGGATGTGGAAACTGCGACGGCCACATCTCACACAGAGAGTGTGA  Raphanus raphanistrum subsp. raphanistrum (MS)

               501    -    551
UN14590        --> CTCTTGTTCCTCCTCTTTCCGAAACTCCCCGTTCCCTTCGTCATTGCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY897387       <-- CTCTTGTTCCTCCTCTTTCCGAAACTCCCCGTTCCCTTCGTCATTGCAGA
EY948390       <-- CTCTTGTTCCTCCTCTTTCCGAAACTCCCCGTTCCCTTCGTCATTGCAGA
EY946962       <-- CTCTTGTTCCTCCTCTTTCCGAAACTCCCCGTTCCCTTCGTCATTGCAGA
FD540307       <-- CTCTTGTTCCTCCTCTTTCCGAAACTCCCCGTTCCCTTCGTCATTGCAGA
FD580415       <-- CTCTTGTTCCTCCTCTTTCCGAAACTCCCCGTTCCCTTCGTCATTGCAGA
EV566887       <-- CTCTTGTTCCTCCTCTTTCCGAAACTCCCCGTTCCCTTCGTCATTGCAGA
EX746474       <-- CTCTTGTTCCTCCTATTTCCGAAACTCCCCGTTCCCTTCGTCATTGCAGA
EX906348       <-- CTCTTGTTCCTCCTCTTTCCGAAACTCCCCGTTCCCTTCGTCATTGCAGA
FD572224       <-- CTCTTGTTCCTCCTCTTTCCGAAACTCCCCGTTCCCTTCGTCATTGCAGA
EY908483       <-- CTCTTGTTCCTCCTCTTTCCGAAACTCCCCGTTCCCTTCGTCATTGCAGA
EX906099       <-- CTCTTGTTCCTCCTCTTTCCGAAACTCCCCGTTACCTTCGTCATTGCAGA
EY944103       --> CTCTTGTTCCTCCTCTTTCCGAAACTCCCCGTTCCCTTCGTCATTGCAGA
EY942956       --> CTCTTGTTCCTCCTCTTTCCGAAACTCCCCGTTCCCTTCGTCATTGCAGA
EX769316       --> CTCTTGTTCCTCCTCTTTCCGAAACTCCCCGTTACCTTCGTCATTGCAGA
EX909721       --> CTCTTGTTCCTCCTCTTTCCGAAACTCCCCGTTACCTTCGTCATTGCAGA
FD584211       --> CTCTTGTTCCTCCTCTTTCCGAAACTCCCCGTTCCCTTCGTCATTGCAGA
EV571915       --> CTCTTGTTCCTCCTCTTTCCGAAACTCCCCGTTCCCTTCGTCATTGCAGA
EX769506       --> CTCTTGTTCCTCCTCTTTCCGAAACTCCCCGTTCCCTTCGTCATTGCAGA
EX909900       --> CTCTTGTTCCTCCTCTTTCCGAAACTCCCCGTTCCCTTCGTCATTGCAGA
FD575904       --> CTCTTGTTCCTCCTCTTTCCGAAACTCCCCGTTCCCTTCGTCATTGCAGA
FY437115       --> CTCTTGTTCCTCCTCTTTCCGAAACTCCCCGTTCCCTTCGTCATTGCAGA
EY904168       --> CTCTTGTTCCTCCTCTTTCCAAAACTCCCCGTTCCCTTCGTCATTGCAAA

               551    -    601
UN14590        --> GGATGCGAAATAACTTTAGGTCTCTCTCTGAGAAGTGACGGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY897387       <-- GGATGCGAAATAACTTTAGGTCTCTgagaagtgcc........
EY948390       <-- GGATGCGAAATAACTTgacttctctgagaagtcc.........
EY946962       <-- GGATGCGAAA.................................
FD540307       <-- GGATGCGAAATAACTTTAGGCCTCTCTCTGAGAAGTcc.....
FD580415       <-- GGATGCGAAATAACTTTAGGTCTCTgagaagtcc.........
EV566887       <-- GGATGCGAAATAACTT-AGGTCTCTgagaagtccc........
EX746474       <-- GGATGCGAAATAACTTTAGGTCTCTCTCTGAGAAGTGACGGCC
EX906348       <-- GGATGCGAAATAACTTTAGGTCTCTgagaagtgc.........
FD572224       <-- GGATGCGAAATAACTTTAGGTCTCTCc................
EY908483       <-- GGATGCGAAATAACTTTAGGTCTCTCTCTc.............
EX906099       <-- GGATGCGAAATAACTTTAGGTCTCTgagaagtc..........
EY944103       --> GGATGCGAAATAACTTgacttctctgagaagtcc.........
EY942956       --> ...........................................
EX769316       --> GGATGCGAAATAACTTTAGGTCTCTgaaaagtc..........
EX909721       --> GGATGCGAAATAACTTTAGGTCTCTgaaaagtc..........
FD584211       --> GGATGCGAAATAACTTTAGGTCTCTgagaagtcc.........
EV571915       --> GGATGCGAAATAACTT-AGGTCTCTgagaagtccc........
EX769506       --> GGATGCGAAATAACTTTAGGTCTCTgagaagtgc.........
EX909900       --> GGATGCGAAATAACTTTAGGTCTCTgagaagtgc.........
FD575904       --> GGATGCGAAATAACTTTAGGTCTCTCc................
FY437115       --> GGATGCGA...................................
EY904168       --> GGATGCGAAATAACTTTAGGTCTCTCTCTc.............