RadishBase

| | | |
Alignment for radish unigene UN14621

               1      -     51
UN14621        --> GGAAGATTGTTGGGGAAGAAGAAGAAGAAGAAGAAGGAAAGATGGCCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545640       <-- ..................................................
EV545161       <-- ..................................................
EY902177       <-- ..................................................
EY912613       <-- ..................................................
EY917555       <-- ..................................................
EX893798       <-- ..................................................
EY936413       <-- ..................................................
FD985152       <-- ..................................................
EY929047       <-- ..................................................
EV550325       --> GGAAGATTGTTGGGGAAGAAGAAGAAGAAGAAGAAGGAAAGATGGCCTCT
EW714485       --> ..................................................
EV549750       --> ..................................................
EY921402       --> ..................................................
FD963639       --> ..................................................

               51     -    101
UN14621        --> TCTCTTTTCTCCCCAGTGAGCACCGGCTCATTTCTCAAATGCCGTTTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545640       <-- ..................................................
EV545161       <-- ..................................................
EY902177       <-- ..................................................
EY912613       <-- ..................................................
EY917555       <-- ..................................................
EX893798       <-- ..................................................
EY936413       <-- ..................................................
FD985152       <-- ..................................................
EY929047       <-- ..................................................
EV550325       --> TCTCTTTTCTCCCCAGTGAGCACCGGCTCATTTCTCAAATGCCGTTTCTC
EW714485       --> ..................................................
EV549750       --> ..................................................
EY921402       --> ..................................................
FD963639       --> ..................................................

               101    -    151
UN14621        --> CCCTCCTACACAGCTTTCATCATCCCAGAAAAACAACAGTATGAGATGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545640       <-- ..................................................
EV545161       <-- ..................................................
EY902177       <-- ..................................................
EY912613       <-- ..................................................
EY917555       <-- ..................................................
EX893798       <-- ..................................................
EY936413       <-- ..................................................
FD985152       <-- ..................................................
EY929047       <-- ..................................................
EV550325       --> CCCTCCTACACAGCTTTCATCATCCCAGAAAAACAACAGTATGAGATGCA
EW714485       --> ..................................................
EV549750       --> ..................................................
EY921402       --> ..................................................
FD963639       --> ..................................................

               151    -    201
UN14621        --> GCTTTTCTCCCGACGACTACTACATTCCTGCTGTTGATTTTGTTGGCCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545640       <-- ..................................................
EV545161       <-- ..................................................
EY902177       <-- ..................................................
EY912613       <-- ..................................................
EY917555       <-- ..................................................
EX893798       <-- ..................................................
EY936413       <-- ..................................................
FD985152       <-- ..................................................
EY929047       <-- ..................................................
EV550325       --> GCTTTTCTCCCGACGACTACTACATTCCTGCTGTTGATTTTGTTGGCCAC
EW714485       --> ..................................................
EV549750       --> ..................................................
EY921402       --> ..................................................
FD963639       --> ..................................................

               201    -    251
UN14621        --> TCTCTCTCTGCATTGTATGATACACAGAAGTGGGCATCTTTTGCATCCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545640       <-- ..................................................
EV545161       <-- ..................................................
EY902177       <-- ..................................................
EY912613       <-- ..................................................
EY917555       <-- ..................................................
EX893798       <-- ..................................................
EY936413       <-- ..................................................
FD985152       <-- ..................................................
EY929047       <-- ..................................................
EV550325       --> TCTCTCTCTGCATTGTATGATACACAGAAGTGGGCATCTTTTGCATCCGC
EW714485       --> ..................................................
EV549750       --> ..................................................
EY921402       --> ..................................................
FD963639       --> ..................................................

               251    -    301
UN14621        --> CGGACTCGTGTGGTTTTACCTGACGGCTAGGCCTGGTGTTCTAGTCGACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545640       <-- ..................................................
EV545161       <-- ..................................................
EY902177       <-- ..................................................
EY912613       <-- ..................................................
EY917555       <-- ..................................................
EX893798       <-- ..................................................
EY936413       <-- ..................................................
FD985152       <-- ..................................................
EY929047       <-- ..................................................
EV550325       --> CGGACTCGTGTGGTTTTACCTGACGGCTAGGCCTGGTGTTCTAGTCGACG
EW714485       --> ..................................................
EV549750       --> ..................................................
EY921402       --> ..................................................
FD963639       --> ..................................................

               301    -    351
UN14621        --> CCATTGACGCATATCTCCTGGCTCCACTCCAGCTTGGTATTGACACTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545640       <-- ..................................................
EV545161       <-- ..................................................
EY902177       <-- ..................................................
EY912613       <-- ..................................................
EY917555       <-- ..................................................
EX893798       <-- ..................................................
EY936413       <-- ..................................................
FD985152       <-- ..................................................
EY929047       <-- ..................................................
EV550325       --> CCATTGACGCATATCTCCTGGCTCCACTCCAGCTTGGTATTGACACTCTG
EW714485       --> ..................................................
EV549750       --> ..................................................
EY921402       --> ..................................................
FD963639       --> ..................................................

               351    -    401
UN14621        --> ATTGGGACGAGGAGGTTTAAGAGGTCTGATTTCTTGGTGGCAGAGAAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545640       <-- ..................................................
EV545161       <-- ..................................................
EY902177       <-- ..................................................
EY912613       <-- ..................................................
EY917555       <-- ..................................................
EX893798       <-- ..................................................
EY936413       <-- ..................................................
FD985152       <-- ..................................................
EY929047       <-- ..................................................
EV550325       --> ATTGGGACGAGGAGGTTTAAGAGGTCTGATTTCTTGGTGGCAGAGAAGCT
EW714485       --> ..................................................
EV549750       --> ..................................................
EY921402       --> ..................................................
FD963639       --> ..................................................

               401    -    451
UN14621        --> TGGAGAAGGCTCATTCGGAGTGGTGTATTCAGGGGTCCTTCTCCCAAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545640       <-- ..................................................
EV545161       <-- ..................................................
EY902177       <-- ..................................................
EY912613       <-- ..................................................
EY917555       <-- ..................................................
EX893798       <-- ..................................................
EY936413       <-- ..................................................
FD985152       <-- ..................................................
EY929047       <-- ..................................................
EV550325       --> TGGAGAAGGCTCATTCGGAGTGGTGTATTCAGGGGTCCTTCTCCCAAAGA
EW714485       --> ..................................................
EV549750       --> ..................................................
EY921402       --> ..................................................
FD963639       --> ..................................................

               451    -    501
UN14621        --> ATTCTTCAAGTGAGCAGCGGATTATGAACAAGGCTACACTTAAATCTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545640       <-- ..................................................
EV545161       <-- ..................................................
EY902177       <-- ..................................................
EY912613       <-- ..................................................
EY917555       <-- ..................................................
EX893798       <-- ..................................................
EY936413       <-- ..................................................
FD985152       <-- ..................................................
EY929047       <-- ..................................................
EV550325       --> ATTCTTCAAGTGAGCAGCGGATTATGAACAAGGCTACACTTAAATCTTTG
EW714485       --> ..................................................
EV549750       --> ..................................................
EY921402       --> ..................................................
FD963639       --> ..................................................

               501    -    551
UN14621        --> GGGGATTTTAAGGAGAGGGTTATTCTCAAGAAGGTTAAGCTTGGGGTTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545640       <-- ..................................................
EV545161       <-- ..................................................
EY902177       <-- ..................................................
EY912613       <-- ..................................................
EY917555       <-- ..................................................
EX893798       <-- ..................................................
EY936413       <-- ..................................................
FD985152       <-- ..................................................
EY929047       <-- ..................................................
EV550325       --> GGGGATTTTAAGGAGAGGGTTATTCTCAAGAAGGTTAAGCTTGGGGTTCG
EW714485       --> ..................................................
EV549750       --> ..................................................
EY921402       --> ..................................................
FD963639       --> ..................................................

               551    -    601
UN14621        --> AGGTGCTCAGGACTTCGGCGAGTACGAAGAGTGGTTTAACTACAGACTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545640       <-- ..................................................
EV545161       <-- ..................................................
EY902177       <-- ..................................................
EY912613       <-- ..................................................
EY917555       <-- ..................................................
EX893798       <-- ..................................................
EY936413       <-- ..................................................
FD985152       <-- ..................................................
EY929047       <-- ..................................................
EV550325       --> AGGTGCTCAGGACTTCGGCGAGTACGAAGAGTGGTTTAACTACAGACTCT
EW714485       --> ..................................................
EV549750       --> ..................................................
EY921402       --> ..................................................
FD963639       --> ..................................................

               601    -    651
UN14621        --> CTAGGGCTGCTCCTGACACCTGCGCTGAGTTTCTCGGCAGCTTTGTCGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545640       <-- ..................................................
EV545161       <-- ..................................................
EY902177       <-- ..................................................
EY912613       <-- ..................................................
EY917555       <-- ..................................................
EX893798       <-- ..................................................
EY936413       <-- ..................................................
FD985152       <-- ..................................................
EY929047       <-- ..................................................
EV550325       --> CTAGGGCTGCTCCTGACACCTGCGCTGAGTTTCTCGGCAGCTTTGTCGCC
EW714485       --> ..................................................
EV549750       --> ..................................................
EY921402       --> ..................................................
FD963639       --> ..................................................

               651    -    701
UN14621        --> GACAAGACCAATACTGTCTTTACAAAAGGCGGCAAATGGCTCGTCTGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545640       <-- .......CCAATACTGTCTTTACAAAAGGCGGCAAATGGCTCGTCTGGAG
EV545161       <-- ..................................................
EY902177       <-- ..................................................
EY912613       <-- ..................................................
EY917555       <-- ..................................................
EX893798       <-- ..................................................
EY936413       <-- ..................................................
FD985152       <-- ..................................................
EY929047       <-- ..................................................
EV550325       --> GACAAGACCAATACTGTCTTTACAAAAGGCGGCAAATGGCTCGTCTGGAG
EW714485       --> .............................CGGCAAATGGCTCGTCTGGAG
EV549750       --> ........................................gCGTCTGGAG
EY921402       --> ..................................................
FD963639       --> ..................................................

               701    -    751
UN14621        --> GTTCGAGGGAGACCGTGATCTGGGTGATTACATGAAAGATAGGAGTTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545640       <-- GTTCGAGGGAGACCGTGATCTGGGTGATTACATGAAAGATAGGAGTTTTC
EV545161       <-- ................GATCTGGGTGATTACATGAAAGATAGGAGCTTCC
EY902177       <-- .................ATCTGGGTGATTACATGAAAGATAGGAGCTTTC
EY912613       <-- ..................................................
EY917555       <-- ..................................................
EX893798       <-- ..................................................
EY936413       <-- ..................................................
FD985152       <-- ..................................................
EY929047       <-- ..................................................
EV550325       --> GTTCGAGGGAGACCGTGATCTGGGTGATTACATGAAAGATAGGAGTTTTC
EW714485       --> GTTCGAGGGAGACCGTGATCTGGGTGATTACATGAAAGATAGGAGTTTTC
EV549750       --> GTTCGAGGGAGACCGTGATCTGGGTGATTACATGAAAGATAGGAGCTTCC
EY921402       --> ..................................................
FD963639       --> ..................................................

               751    -    801
UN14621        --> CTT-CAAATCTGGAGTCCATCATGTTTGGGCGTGTTCTTCAAGGTGTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545640       <-- CTT-CAAATCTGGAGTCCATCATGTTTGGGCGTGTTCTTCAAGGTGTGGA
EV545161       <-- CTTTCAAATCTGGAGTCCATCATGTTTGGGCGTGCTCTTCAAGGTGTGGA
EY902177       <-- CTT-CAAATCTGGAGTCCATCATGTTTGGGCGTGTTCTTCAAGGTGTGGA
EY912613       <-- .......................GTTTGGGCGTGTTCTTCAAGGTGTGGA
EY917555       <-- .................................ggttTTCAAGGTGTGGA
EX893798       <-- ..........................................GGTGTGGA
EY936413       <-- ..................................................
FD985152       <-- ..................................................
EY929047       <-- ..................................................
EV550325       --> CTT-CAA-TCTGGAGTCCATCATGTTTGGGCGTGTTCT............
EW714485       --> CTT-CAAATCTGGAGTCCATCATGTTTGGGCGTGTTCTTCAAGGTGTGGA
EV549750       --> CTT-CAAATCTGGAGTCCATCATGTTTGGGCGTGCTCTTCAAGGTGTGGA
EY921402       --> ................................gGTTCTTCAAGGTGTGGA
FD963639       --> ..................................................

               801    -    851
UN14621        --> ATCTGTGAAACGTCGTGCACTCATCATTAAGCAGATCATGCGCCAGATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545640       <-- ATCTGTGAAACGTCGTGCACTCATCATTAAGCAGATCATGCGCCAGATCA
EV545161       <-- ATCTGTGAAACGTCGTGCACTCATCATTAAGCAGATCATGCGCCAGATCA
EY902177       <-- CTCTGTCAAACGTCGTGCACTCATCATTAAGCAGATCATGCGCCAGATCA
EY912613       <-- ATCTGTGAAACGTCGTGCACTCATCATTAAGCAGATCATGCGCCAGATCA
EY917555       <-- ATCTGTGAAACGTCGTGCACTCATCATTAAGCAGATCATGCGCCAGATCA
EX893798       <-- ATCTGTGAAACGTCGTGCACTCATCATTAAGCAGATAATGCGTCAGATCA
EY936413       <-- .....tcAAACGTCGTGCACTCATCATTAAGCAGATCATGCGCCAGATCA
FD985152       <-- ............TCGTGCACTCATCATTAAGCAGATCATGCGCCAGATCA
EY929047       <-- ..................................................
EV550325       --> ..................................................
EW714485       --> ATCTGTGAAACGTCGTGCACTCATCATTAAGCAGATAATGCGTCAGATCA
EV549750       --> ATCTGTGAAACGTCGTGCACTCATCATTAAGCAGATCATGCGCCAGATCA
EY921402       --> ATCTGTGAAACGTCGTGCACTCATCATTAAGCAGATCATGCGCCAGATCA
FD963639       --> ..................................................

               851    -    901
UN14621        --> TTACATCTCTCAGGAAGATCCATGATACTGGCATTGTTCACAGGGACGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545640       <-- TTACATCTCTCAGGAAGATCCATGATACTGGCATTGTTCACAGGGACGTG
EV545161       <-- TTACATCTCTCAGGAAGATCCATGATACTGGCATTGTTCACAGGGACGTG
EY902177       <-- TTACATCTCTCAGGAAGATCCATGATACTGGTATTGTTCACAGGGACGTG
EY912613       <-- TTACATCTCTCAGGAAGATCCATGATACTGGCATTGTTCACAGGGACGTG
EY917555       <-- TTACATCTCTCAGGAAGATCCATGATACTGGCATTGTTCACAGGGACGTG
EX893798       <-- TTACATCTCTCAGGAAGATCCATGATACTGGCATTGTTCACAGGGACGTG
EY936413       <-- TTACATCTCTCAGGAAGATCCATGATATTGGCATTGTTCACAGGGACGTG
FD985152       <-- TTACACCTCTCAGGAAGATCCATGATACTGGCATTGTTCACAGGGACGTG
EY929047       <-- ...................................GTTCACAGGGACGTG
EV550325       --> ..................................................
EW714485       --> TTACATCTCTCAGGAAGATCCATGATACTGGCATTGTTCACAGGGACGTG
EV549750       --> TTACATCTCTCAGGAAGATCCATGATACTGGCATTGTTCACAGGGACGTG
EY921402       --> TTACATCTCTCAGGAAGATCCATGATACTGGCATTGTTCACAGGGACGTG
FD963639       --> ..................................................

               901    -    951
UN14621        --> AAGCCCGCCAACTTGGTGGTTACAAAGAAGGGGCAGATTAAGCTCATTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545640       <-- AAGCCCGCCAACTTGGTGGTTACAAAGAAGGGGCAGATTAAGCTCATTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545161       <-- AAGCCCGCCAACTTGGTGGTTACAAAGAAGGGGCAGATTAAGCTCATTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY902177       <-- AAGCCCGCCAACTTGGTGGTTACAAAGAAGGGCCAGATTAAGCTCATTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY912613       <-- AAGCCCGCCAACTTGGTGGTTACAAAGAAGGGGCAGATTAAGCTCATTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY917555       <-- AAGCCCGCCAACTTGGTGGTTACAAAGAAGGGCCAGATTAAGCTCATTGA  Raphanus raphanistrum subsp. landra
EX893798       <-- AAGCCCGCCAACTTGGTGGTTACAAAGAAGGGGCAGATTAAGCTCATTGA  Raphanus sativus var. oleiformis
EY936413       <-- AAGCCCGCCAACTTGGTGGTTACAAAGAAGGGCCAGATTAAGCTCATTGA  Raphanus sativus cv Early Scarlet Globe
FD985152       <-- AAGCCCGCCAACTTGGTGGTTACAAAGAAGGGCCAGATTAAGCTCATTGA  Raphanus raphanistrum subsp. landra
EY929047       <-- AAGCCCGCCAACTTGGTGGTTACAAAGAAGGGGCAGATTAAGCTCATTGA  Raphanus sativus var. oleiformis
EV550325       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW714485       --> AAGCCCGCCAACTTGGTGGTTACAAAGAAAGGGCAGATTAAGCTCATTGA  Raphanus sativus var. oleiformis
EV549750       --> AAGCCCGCCAACTTGGTGGTTACAAAGAAGGGGCAGATTAAGCTCATTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY921402       --> AAGCCCGCCAACTTGGTGGTTACAAAGAAGGGCCAGATTAAGCTCATTGA  Raphanus raphanistrum subsp. landra
FD963639       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               951    -   1001
UN14621        --> CTTTGGTGCTGCTGCTGATCTTCGCATCGGCAAGAATTACATCCCTGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545640       <-- CTTTGGTGCTGCTGCTGATCTTCGCATCGGCAAGAATTACATTCCTGAAC
EV545161       <-- CTTTGGTGCTGCTGCTGATCTTCGCATCGGCAAGAATTACATCCCTGAGC
EY902177       <-- CTTTGGTGCTGCTGCTGATCTTCGCATCGGCAAGAATTACATTCCTGAAC
EY912613       <-- CTTTGGTGCTGCTGCTGATCTTCGCATCGGCAAGAATTACATCCCTGAGC
EY917555       <-- CTTTGGTGCTGCTGCTGATCTTCGCATCGGCAAGAATTACATCCCTGAGC
EX893798       <-- CTTTGGTGCTGCTGCTGATCTTCGCATCGGCAAGAATTACATCCCTGAGC
EY936413       <-- CTTTGGTGCTGCTGCTGATCTTCGCATCGGCAAGAATTA-TTCCCTGAGC
FD985152       <-- CTTTGGTGCTGCTGCTGATCTTCGCATCGGCAAGAATTACATCCCTGAGC
EY929047       <-- CTTTGGTGCTGCTGCTGATCTTCGCATCGGCAAGAATTACATCCCTGAGC
EV550325       --> ..................................................
EW714485       --> CTTTGGTGCTGCTGCTGATCTTCGCATC......................
EV549750       --> CTTTGGTGCTGCTGCTGATCTTCGCATCGGCAAGAATTACATCCCTGAGC
EY921402       --> CTTTGGTGCTGCTGCTGATCTTCGCATCGGCAAGAATTACATCCCTGAGC
FD963639       --> ..................................................

               1001   -   1051
UN14621        --> GCACATTGCTAGATCCTGACTACTGTCCTCCTGAGCTCTATGTCCTCCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545640       <-- GCACTTTGCTAGATCCTGGCTACTGTCCTCCTGAGCTCTATGTCCTCCCC
EV545161       <-- GCACATTGCTAGATCCTGACTACTGTCCTCCTGAGCTCTATGTCCTCCCC
EY902177       <-- GCACTTTGCTAGATCCTGACTACTGTCCTCCTGAGCTCTATGTCCTCCCC
EY912613       <-- GCACATTGCTAGATCCTGACTACTGTCCTCCTGAGCTCTATGTCCTCCCC
EY917555       <-- GCACATTGCTAGATCCTGACTACTGTCCTCCTGAGCTCTATGTCCTCCCC
EX893798       <-- GCACATTGCTAGATCCTGACTACTGTCCTCCTGAGCTCTATGTCCTCCCC
EY936413       <-- GCACATTGCTAGATCCTGACTACTGTCCTCCTGAGCTCTATGTCCTCCCC
FD985152       <-- GCACATTGCTAGATCCTGACTACTGTCCTCCTGAGCTCTATGTCCTCCCC
EY929047       <-- GCACATTGCTAGATCCTGACTACTGTCCTCCTGAGCTCTATGTCCTCCCC
EV550325       --> ..................................................
EW714485       --> ..................................................
EV549750       --> GCACATTGCTAGATCCTGACTACTGTCCTCCTGAGCTCTATGTCCTCCCC
EY921402       --> GCACATTGCTAGATCCTGACTACTGTCCTCCTGAGCTCTATGTCCTCCCC
FD963639       --> ..................................................

               1051   -   1101
UN14621        --> GAGGAAACCCCAACTCCTCCTCCCGAGCCTATTGCCGCTTTGCTTTCCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545640       <-- GAGGAGACTCCAACTCCTCCTCCCGAGCCTATTGCCGCTTTGCTTTCCCC
EV545161       <-- GAGGAAACCCCAACTCCTCCTCCCGAGCCTATTGCCGCTTTGCTTTCCCC
EY902177       <-- GAGGAGACTCCAACTCCTCCTCCCGAGCCTATTGCCGCTTTGCTTTCCCC
EY912613       <-- GAGGAAACCCCAACTCCTCCTCCCGAGCCTATTGCCGCTTTGCTTCCCCC
EY917555       <-- GAGGAAACCCCAACTCCTCCTCCCGAGCCTATTGCCGCTTTGCTTTCCCC
EX893798       <-- GAGGAAACCCCAACTCCTCCTCCCGAGCCTATTGCCGCTTTGCTTTCCCC
EY936413       <-- GAGGAAACGCCAACTCCTCCTCCCGAGCCTATTGCCGCTTTGCTTTCCCC
FD985152       <-- GAGGAAACTCCAACTCCTCCTCCCGAGCCTATTGCCGCTTTGCTTTCCCC
EY929047       <-- GAGGAAACCCCAACTCCTCCTCCCGAGCCTATTGCCGCTTTGCTTTCCCC
EV550325       --> ..................................................
EW714485       --> ..................................................
EV549750       --> GAGGAAACCCCAACTCCTCCTCCCGAGCCTATTGCCGCTTTGCTTTCCCC
EY921402       --> GAGGAAACCCCAACTCCTCCTCCCGAGCCTATTGCCGCTTTGCTTTCCCC
FD963639       --> .AGGAAACTCCAACTCCTCCTCCCGAGCCTATTGCCGCTTTGCTTTCCCC

               1101   -   1151
UN14621        --> CATTCTCTGGCAGTTGAACAGTCCGGATCTGTTTGATATGTATTCTGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545640       <-- CATTCTCTGGCAGTTGAACAGTCCGGATCTGTTTGATATGTATTCTGCTG
EV545161       <-- CATTCTCTGGCAGTTGAACAGTCCGGATCTGTTTGATATGTATTCTGCTG
EY902177       <-- CATTCTCTGGCAGTTGAACAGTCCGGATCTGTTTGATATGTATTCTGCTG
EY912613       <-- CATTCTCTGGCAGTTGAACAGTCCGGATCTGTTTGATATGTATTCTGCTG
EY917555       <-- CATTCTCTGGCAGTTGAACAGTCCGGATCTGTTTGATATGTATTCTGCTG
EX893798       <-- CATTCTCTGGCAGTTGAACAGTCCGGATCTGTTTGATATGTATTCTGCTG
EY936413       <-- CATTCTCTGGCAGTTGAATAGTCCGGATCTGTTTGATATGTATTCTGCTG
FD985152       <-- CATTCTCTGGCAGTTGAATAGTCCGGATCTGTTTGATATGTATTCTGCTG
EY929047       <-- CATTTTTTGGCAGTTGAACAGTCCGGATCTGTTTGATATGTATTTTGCTG
EV550325       --> ..................................................
EW714485       --> ..................................................
EV549750       --> CATTCTCTGGCAGTTGAACAGTCCGGATCTGTTTGATATGTATTCTGCTG
EY921402       --> CATTCTCTGGCAGTTGAACAGTCCGGATCTGTTTGATATGTATTCTGCTG
FD963639       --> CATTCTCTGGCAGTTGAATAGTCCGGATCTGTTTGATATGTATTCTGCTG

               1151   -   1201
UN14621        --> GGATAGTGCTTCTGCAAATGGCGGTTCCTACCATAAGATCTTCTGCGGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545640       <-- GGATAGTGCTTCTGCAAATGGCGGTTCCTACCATAAGATCTTCTGCGGGT
EV545161       <-- GGATAGTGCTTCTGCAAATGGCGGTTCCTACCATAAGATCTTCTGCGGGT
EY902177       <-- GGATAGTGCTTCTGCAAATGGCGGTTCCTACCATAAGATCTTCTGCGGGT
EY912613       <-- GGATAGTGCTTCTGCAAATGGCGGTTCCTACCATAAGATCTTCTGCGGGT
EY917555       <-- GGATAGTGCTTCTGCAAATGGCGGTTCCTACCATAAGATCTTCTGCGGGT
EX893798       <-- GGATAGTGCTTCTGCAAATGGCGGTTCCTACCATAAGATCTTTTGCGGGT
EY936413       <-- GGATAGTGCTTCTGCAAATGGCGGTTCCTACCATAAGATCTTCTGCGGGT
FD985152       <-- GGATAGTGCTTCTGCAAATGGCGGTTCCTACCATAAGATCTTCTGCGGGT
EY929047       <-- GGATAGTGCTTCTGCAAATGGCGGTTCCTACCATAAGATTTTTTGCGGGT
EV550325       --> ..................................................
EW714485       --> ..................................................
EV549750       --> GGATAGTGCTTCTGCAAATGGCGGTTCCTACCATAAGATCTTCTGCGGGT
EY921402       --> GGATAGTGCTTCTGCAAATGGCGGTTCCTACCATAAGATCTTCTGCGGGT
FD963639       --> GGATAGTGCTTCTGCAAATGGCGGTTCCTACCATAAGATCTTCTGCGGGT

               1201   -   1251
UN14621        --> CTGAAGAATTTCAATCTTGAGATCAAGTCTGTTCAATATGACCTTAATAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545640       <-- CTGAAGAATTTCAATCTTGAGATCAAGTCTGTTCAATATGACCTTAATAG
EV545161       <-- CTGAAGAATTTCAATCTTGAGATCAAGTCTGTTCAATATGACCTTAATAG
EY902177       <-- CTGAAGAATTTCAATCTTGAGATCAAGTCTGTTCAATATGACCTTAATAG
EY912613       <-- CTGAAGAATTTCAATCTTGAGATCAAGTCTGTTCAATATGACCTTAATAG
EY917555       <-- CTGAAGAATTTCAATCTTGAGATCAAGTCTGTTCAATATGACCTTAATAG
EX893798       <-- TTGAAGAATTTCAATCTTGAGATCAAGTCTGTTCAATATGACCTTAATAG
EY936413       <-- CTGAAGAATTTCAATCTTGAGATCAAGTCTGTTCAATATGACCTTAATAG
FD985152       <-- CTGAAGAATTTCAATCTTGAGATCAAGTCTGTTCAATATGACCTTAATAG
EY929047       <-- TTGAAGAATTTCAATCTTGAGATCAAGTCTGTTCAATATGACCTTAATAG
EV550325       --> ..................................................
EW714485       --> ..................................................
EV549750       --> CTGAAGAATTTCAATCTTGAGATCAAGTCTGTTCAATATGACCTTAATAG
EY921402       --> CTGAAGAATTTCAATCTTGAGATCAAGTCTGTTCAATATGACCTTAATAG
FD963639       --> CTGAAGAATTTCAATCTTGAGATCAAGTCTGTTCAATATGACCTTAATAG

               1251   -   1301
UN14621        --> ATGGCGTGACAGGACTCGGACTAGGCCTGACTTGAGCATCCTTGATCTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545640       <-- ATGGCGTGACAGGACTCGGACTAGGCCTGACTTGAGCATCCTTGATCTGG
EV545161       <-- ATGGCGTGACAGGACTCGGACTAGGCCTGACTTGAGCATCCTTGATCTGG
EY902177       <-- ATGGCGTGACAGGACTCGTACTAGGCCTGACTTGAGCATACTTGATCTGG
EY912613       <-- ATGGCGTGACAGGACTCGGACTAGGCCTGACTTGAGCATCCTTGATCTGG
EY917555       <-- ATGGCGTGACAGGACTCGGACTAGGCCTGACTTGAGCATCCTTGATCTGG
EX893798       <-- ATGGCGTGACAGGACTCGGACTAGGCCTGACTTGAGCATCCTTGATCTGG
EY936413       <-- ATGGCTTGACAGGACTCGGACTAGGCCTGACTTGAGCATCCTTGATCTGG
FD985152       <-- ATGGCGTGACAGGACTCGGACTAGGCCTGACTTGAGCATCCTTGATCTGG
EY929047       <-- ATGGCGTGACAGGACTCGGACTAGGCCTGACTTGAGCATCCTTGATTTGG
EV550325       --> ..................................................
EW714485       --> ..................................................
EV549750       --> ATGGCGTGACAGGACTCGGACTAGGCCTGACTTGAGCATCCTTGATCTGG
EY921402       --> ATGGCGTGACAGGACTCGGACTAGGCCTGACTTGAGCATCCTTGATCTGG
FD963639       --> ATGGCGTGACAGGACTCGGACTAGGCCTGACTTGAGCATCCTTGATCTGG

               1301   -   1351
UN14621        --> ACTCTGGCAGAGGCTGGGACCTCGTCACTAAACTTATATCCGAGCGAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545640       <-- ACTCTGGCAGAGGCTGGGACCTCGTCACTAAACTTATATCCGAGCGAGGT
EV545161       <-- ACTCTGGCAGAGGCTGGGACCTCGTCACTAAACTTATATCCGAGCGAGGT
EY902177       <-- ACTCTGGCAGAGGCTGGGACCTCGTCACTAAACTTATATCCGAGCGAGGT
EY912613       <-- ACTCTGGCAGAGGCTGGGACCTCGTCACTAAACTTATATCCGAGCGAGGT
EY917555       <-- ACTCTGGCAGAGGCTGGGACCTCGTCACTAAACTTATATCCGAGCGAGGT
EX893798       <-- ACTCTGGCAGAGGCTGGGACCTCGTCACTAAACTTATATCCGAGCGAGGT
EY936413       <-- ACTCTGGCAGAGGCTGGGACCTCGTCACTAAACTTATATCCGAGCGAGGT
FD985152       <-- ACTCTGGCAGAGGCTGGGACCTCGTCACTAAACTTATATCCGAGCGAGGT
EY929047       <-- ACTTTGGCAGAGGCTGGGACCTCGTCACTAAACTTATATCCGAGCGAGGT
EV550325       --> ..................................................
EW714485       --> ..................................................
EV549750       --> ACTCTGGCAGAGGCTGGGACCTCGTCACTAAACTTATATCCGAGCGAGGT
EY921402       --> ACTCTGGCAGAGGCTGGGACCTCGTCACTAAACTTATATCCGAGCGAGGT
FD963639       --> ACTCTGGCAGAGGCTGGGACCTCGTCACTAAACTTATATCCGAGCGAGGT

               1351   -   1401
UN14621        --> TCTCTGAGACGCGGACGCCTTTCTGCCGCTGCTGCTCTCAGACACCCTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545640       <-- TCTTTGAGACGCGGACGCCTTTCTGCCGCTGCTGCTCTCAGACACCCTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545161       <-- TCT-TGAGACGCGGACGCCTTTCTGCCGCTGCTGCTCTCAGACACCCTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY902177       <-- TCTCTGAGACGCGGACGCCTTTCTGCCGCTGCTGCTCTCAGACACCCTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY912613       <-- TCTCTGAGACGCGGACGCCTTTCTGCCGCTGCTGCTTTCAGACACCCTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY917555       <-- TCTCTGAGACGCGGACGCCTTTCTGCCGCTGCTGCTTTCAGACACCCTTA  Raphanus raphanistrum subsp. landra
EX893798       <-- TCTTTGAGACGCGGACGCCTTTCTGCCGCTGCTGCTTTCAGACACCCTTA  Raphanus sativus var. oleiformis
EY936413       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD985152       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY929047       <-- TTTTTGAGACGCGGACGCCTTTTTGCCGCTGCTGCTTTCAGACACCCTTA  Raphanus sativus var. oleiformis
EV550325       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW714485       --> ..................................................  Raphanus sativus var. oleiformis
EV549750       --> TCT-TGAGACGCGGACGCCTTTCTGCCGCTGCTGCTCTCAGACACCCTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY921402       --> TCTCTGAGACGCGGACGCCTTTCTGCCGCTGCTGCTCTCAGACACCCTTA  Raphanus raphanistrum subsp. landra
FD963639       --> TCTCTGAGACGCGGACGCCTTTCTGCCGCTGCTGCTCTCAGACACCCTTA  Raphanus raphanistrum subsp. maritimus

               1401   -   1451
UN14621        --> TTTTTTATTGGG-TGGTGATCAAGCTGCCGCTGTTCTTTCTAAGCTTAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545640       <-- TTTTTTATTGGG-TGGTGATCAAGCTGCCGCTGTTCTTTCTAAGCTTAGT
EV545161       <-- TTTTTTATTGGG-TGGTGATCAAGCTGCCGCTGTTCTTTCTAAGCTTAGT
EY902177       <-- TTTTTTATTGGG-TGGTGATCAAGCTGCCGCTGTTCTTTCTAAGCTTAGT
EY912613       <-- TTTTTTATTGGG-TGGTGATCAAGCTGCCGCTGTTCTTTTTAAGCTTAGT
EY917555       <-- TTTTTTATTGGG-CGGTGATCAAGCTGCCGCTGTTCTTTCTAAGCTTAGT
EX893798       <-- TTTTTTATTGGC-TGGTGATCAAGCTGCCGCTGTTCTTTTTAAGCTTAGT
EY936413       <-- ..................................................
FD985152       <-- ..................................................
EY929047       <-- TTTTTTATTGGC-TGGTGATCAAGCTGCCGCTGTTCTTTTTAAGCTTAGT
EV550325       --> ..................................................
EW714485       --> ..................................................
EV549750       --> TTTTTTATTGGGGTGGTGATCAAGCTGCCGCTGTTCTTTCTAAGCTTAGT
EY921402       --> TTTTTTATTGGG-CGGTGATCAAGCTGCCGCTGTTCTTTCTAAGCTTAGT
FD963639       --> TTTTTTATTGGG-TGGTGATCAAGCTGCCGCTGTTCTTTCTAAGCTTAGT

               1451   -   1501
UN14621        --> TTCACCAAGTAATTTCTTCTTATC-ATGTAAATATTATTATGTACACAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545640       <-- TTCACCAAGTAATTTCTTCTTTTC-ATGTAAATATTATTATGTACACAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545161       <-- TTCACCAAGTAATTTCTTCTTTTC-ATGTAAATATTATTATGTACACAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY902177       <-- TTCACCAAGTAATTTCTTCTTATCTATGTAAATATTATTATGTACACAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY912613       <-- TTCACCAAGTAATTTCTTCTTTTC-ATGTAAATATTATTATGTACACAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY917555       <-- TTCACCAAGTAATTTCTTCTTATC-ATGTAAATATTATTATCTACACAAC  Raphanus raphanistrum subsp. landra
EX893798       <-- TTCACCAAGTAATTTCTTCTTATC-ATGTAAATATTATTATCTACACAAC  Raphanus sativus var. oleiformis
EY936413       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD985152       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY929047       <-- TTCACCAAGTAATTTTTTCTTATC-ATGTAAATATTATTATTTACACAAC  Raphanus sativus var. oleiformis
EV550325       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW714485       --> ..................................................  Raphanus sativus var. oleiformis
EV549750       --> TTCACCAAGTAATTTCTTCTTTTC-ATGTAAATATTATTATGTACACA-C  Raphanus raphanistrum subsp. raphanistrum (NY)
EY921402       --> TTCACCAAGTAATTTCTTCTTATC-ATGTAA-TATTATTATCTACACAAC  Raphanus raphanistrum subsp. landra
FD963639       --> TTCACCAAGTAATTTCTTCTTATCTATGTAAATATTATTATGTACTCAAC  Raphanus raphanistrum subsp. maritimus

               1501   -   1551
UN14621        --> TCTCTTCCTTGAATATAAATACTACTCTTT-TTTCTCTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545640       <-- TCTCTTCCTTGAATATAAATACTA.................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545161       <-- TCTCTTCCTTGAATATAAATACCACTCTCT-TTTCTTTCT.  Raphanus raphanistrum subsp. raphanistrum (NY)
EY902177       <-- TCTCTTCCT-GAATATAcctcttttttctt...........  Raphanus raphanistrum subsp. raphanistrum (MS)
EY912613       <-- TCTCTTCCTTGAATATAAATACCACTCTCT-TTTCTTTCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY917555       <-- TCTCTTCCTTGAATATAAATACTACTCTTT-TTTCTCT...  Raphanus raphanistrum subsp. landra
EX893798       <-- TCTCTTCCTTGAATATAAATACTACTCTTTctttc......  Raphanus sativus var. oleiformis
EY936413       <-- .........................................  Raphanus sativus cv Early Scarlet Globe
FD985152       <-- .........................................  Raphanus raphanistrum subsp. landra
EY929047       <-- TCTCTTCCTTGAATATAAATACTACTCTTTCTTTCTtt...  Raphanus sativus var. oleiformis
EV550325       --> .........................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW714485       --> .........................................  Raphanus sativus var. oleiformis
EV549750       --> TCTCTTCCTTGA-TATAAATAC-ACTCTCT-TTcttcta..  Raphanus raphanistrum subsp. raphanistrum (NY)
EY921402       --> TCTCTTCCTTGA-TATAAATACTACTCTTT-TTTCTCT...  Raphanus raphanistrum subsp. landra
FD963639       --> TCTCTTCCT-GAATATAcctcttttttct............  Raphanus raphanistrum subsp. maritimus