Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN14635

               1      -     51
UN14635        --> GAACTCAGAAAAGTTGTAACCAAACAGCTCTTTCTTTCAACAAATCTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY454109       <-- ...............GTAACCAAACAGCTCTTTCTTTCAACAAATCTACA  Raphanus sativus cv GSK3-1
EX764426       <-- .................AACCAAACAGCTCTTTCTTTCAACAAATCTACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940609       <-- ..................................................  Raphanus sativus var. oleiformis
EW735108       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD979350       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD572397       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX889182       <-- ..................................................  Raphanus sativus var. oleiformis
EY913267       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946769       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY948918       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY933115       <-- ..................................................  Raphanus sativus var. oleiformis
FD971562       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW715199       <-- ..................................................  Raphanus sativus var. oleiformis
EX892971       --> GAACTCAGAAAAGTTGTAACCAAACAGCTCTTTCTTTCAACAAATCTACA  Raphanus sativus var. oleiformis
EY942797       --> ...........AGTTGTAACCAAACAGCTCTTTCTTTCAACAAATCTACA  Raphanus sativus cv Rat-Tail Radish #3870
EY909527       --> ..............cGTAACCAAACAGCTCTTTCTTTCAACAAATCTACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928672       --> ...............GTAACCAAACAGCTCTTTCTTTCAACAAATCTACA  Raphanus sativus var. oleiformis
FD936452       --> ...............GTAACCAAACAGCTCTTTCTTTCAACAAATCTACA  Raphanus sativus var. oleiformis
EX768345       --> .................AACCAAACAGCTCTTTCTTTCAACAAATCTACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD545413       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719861       --> ..................................................  Raphanus sativus var. oleiformis

               51     -    101
UN14635        --> CACACA-TAAGTTATATGTTACAAGAGATTTTGGAGAAACTGTTTCTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY454109       <-- CACACA-TAAGTTATATGTTACAAGAGATTTTGGAGAAACTGTTTCTCTC  Raphanus sativus cv GSK3-1
EX764426       <-- GACACAATAAGTTATATGTTACAAGAGATTTAGGAGAAACTGTTTCTCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940609       <-- .................................................C  Raphanus sativus var. oleiformis
EW735108       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD979350       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD572397       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX889182       <-- ..................................................  Raphanus sativus var. oleiformis
EY913267       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946769       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY948918       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY933115       <-- ..................................................  Raphanus sativus var. oleiformis
FD971562       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW715199       <-- ..................................................  Raphanus sativus var. oleiformis
EX892971       --> CACACA-TAAGTTATATGTTACAAGAGATTTTGGAGAAACTGTTTCTCTC  Raphanus sativus var. oleiformis
EY942797       --> CACACA-TAAGTTATATGTTACAAGAGATTTTGGAGAAACTGTTTCTCTC  Raphanus sativus cv Rat-Tail Radish #3870
EY909527       --> GACACAATAAGTTATATGTTACAAGAGATTTAGGAGAAACTGTTTCTCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928672       --> CACGCA-TAAGTTATATGTTACAAGAGATTTTGGAGAAACTGTTTCTCTC  Raphanus sativus var. oleiformis
FD936452       --> CACACA-TAAGTTATATGTTACAAGAGATTTTGGAGAAACTGTTTCTCTC  Raphanus sativus var. oleiformis
EX768345       --> GACACAATAAGTTATATGTTACAAGAGATTTAGGAGAAACTGTTTCTCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD545413       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719861       --> ..................................................  Raphanus sativus var. oleiformis

               101    -    151
UN14635        --> AGAGG-TGTATAAAGAAAAATGTGCACAAAGTAGTGGACAATCTCGTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY454109       <-- AGAGG-TGTATAAAGAAAAATGTGCACAAAGTAGTGGACAATCTCGTCCT
EX764426       <-- AGAGGGTGTATAAAGAAAAATGTGCACAAAGTAGTGGACAATCTCGTCCT
FD940609       <-- AGAGG-TGTA-AAAGAAAA-TGTGCACAAAGTAGTGGACA-TCTCGTC-T
EW735108       <-- ..................................................
FD979350       <-- ..................................................
FD572397       <-- ..................................................
EX889182       <-- ..................................................
EY913267       <-- ..................................................
EY946769       <-- ..................................................
EY948918       <-- ..................................................
EY933115       <-- ..................................................
FD971562       <-- ..................................................
EW715199       <-- ..................................................
EX892971       --> AGAGG-TGTATAAAGAAAAATGTGCACAAAGTAGTGGACAATCTCGTCCT
EY942797       --> AGAGG-TGTACAAAGAAAAATGTGCACAAAGTAGTGGACAATCTCGTCCT
EY909527       --> AAAGGGTGTATAAAGAAAAATGTGCACAAAGTAGTGGACAATCTCGTCCT
EY928672       --> AGAGG-TGTATAAAGAAAAATGTGCACAAAGTAGTGGACAATCTCGTCCT
FD936452       --> AGAGG-TGTATAAAGAAAAATGTGCACAAAGTAGTGGACAATCTCGTCCT
EX768345       --> AGAGGGTGTATAAAGAAAAATGTGCACAAAGTAGTGGACAATCTCGTCCT
FD545413       --> ....G-TGTATAAAGAAAAATGTGCACAAAGTAGTGGACAATCTCGTCCT
EW719861       --> ..................................................

               151    -    201
UN14635        --> ATCCAGTGAACTTCTGCATTCCATATCAAGTCGGTTGAGACATTCGGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY454109       <-- ATCCAGTGAACTTCTGCATTCCATATCAAGTCGGTTGAGACATTAGGAAT  Raphanus sativus cv GSK3-1
EX764426       <-- ATCCAGTGAACTTCTGCATTCCATATCAAGACGGTTGAGACATTCGGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940609       <-- ATCCAGTGA-C-TCTGCATTCCATATCAAGTCGGT-GAGACATT-GG-AT  Raphanus sativus var. oleiformis
EW735108       <-- .................ATTCCATATCAAGACGGTTGAGACAT-CGGAAT  Raphanus sativus cv Rat-Tail Radish #3870
FD979350       <-- ...........................AAGACGGT-GAGACAT-CGGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD572397       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX889182       <-- ..................................................  Raphanus sativus var. oleiformis
EY913267       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946769       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY948918       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY933115       <-- ..................................................  Raphanus sativus var. oleiformis
FD971562       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW715199       <-- ..................................................  Raphanus sativus var. oleiformis
EX892971       --> ATCCAGTGAACTTCTGCATTCCATATCAAGTCGGTTGAGACATTAGGAAT  Raphanus sativus var. oleiformis
EY942797       --> ATCCAGTGAACTTCTGCATTCCATATCAAGTCGGTTGAGACATTAGGAAT  Raphanus sativus cv Rat-Tail Radish #3870
EY909527       --> ATCCAGTGAACTTCTGCATTCCATATCAAGACGGTTGAGACATTCGGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928672       --> ATCCAGTGAACTTCTGCATTCCATATCAAGTCGGTTGAGACATTAGGAAT  Raphanus sativus var. oleiformis
FD936452       --> ATCCAGTGAACTTCTGCATTCCATATCAAGTCGGTTGAGACATTTGGAAT  Raphanus sativus var. oleiformis
EX768345       --> ATCCAGTGAACTTCTGCATTCCATATCAAGACGGTTGAGACATTCGGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD545413       --> ATCCAGTGAACTTCTGCATTCCATATCAAGACGGTTGAAACATTCGGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719861       --> ..................................................  Raphanus sativus var. oleiformis

               201    -    251
UN14635        --> CAGCCCATCATGTGTCAATCGTTCAGCCTTGGGCCTTGGCTTTCTCATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY454109       <-- CAGCCCATCATGTGTCAATCGTTCAGCCTTGGGCCTTGGCTTTCTCATCA  Raphanus sativus cv GSK3-1
EX764426       <-- CAGCCCATCATGTGTCAATCGTTCAGCCTTGGACCTTGGCTTTCTCATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940609       <-- CAGCCCATCATGTGTCAATCGT-CAG-CTTGGGC-TTGGCTTTCTCATCA  Raphanus sativus var. oleiformis
EW735108       <-- CAGCCCATCATGTGTCAATCGTTCAGCCTTGGACCTTGGCTTTCTCATCA  Raphanus sativus cv Rat-Tail Radish #3870
FD979350       <-- CAGCCCATCATGTGTCA-TCGT-CAGC-TTGGAC-TTGGCTTTCTCATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD572397       <-- ........CATGTGTCAATCGT-CAGCCTTGGACCTTGGCTTTCTCATCA  Raphanus sativus cv Early Scarlet Globe
EX889182       <-- ......................TCAGC-TTGGGC-TTGGCTTTCTCATCA  Raphanus sativus var. oleiformis
EY913267       <-- ....................................TGGCTTTCTCATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946769       <-- .......................................CTTTCTCATCA  Raphanus sativus cv Rat-Tail Radish #3870
EY948918       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY933115       <-- ..................................................  Raphanus sativus var. oleiformis
FD971562       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW715199       <-- ..................................................  Raphanus sativus var. oleiformis
EX892971       --> CAGCCCATCATGTGTCAATCGTTCAGCCTTGGGCCTTGGCTTTCTCATCA  Raphanus sativus var. oleiformis
EY942797       --> CAGCCCATCATGTGTCAATCGTTCAGCCTTGGGCCTTGGCTTTCTCATCA  Raphanus sativus cv Rat-Tail Radish #3870
EY909527       --> CAGCCCATCATGTGTCAATCGTTCAGCCTTGGACCTTGGCTTTCTCATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928672       --> CAGCCCATCATGTGTCAATCGTTCAGCCTTGGGCCTTGGCTTTCTCATCA  Raphanus sativus var. oleiformis
FD936452       --> CAGCCCATCATGTGTCAATCGTTCAGCCTTGGGCCTTGGCTTTCTCATCA  Raphanus sativus var. oleiformis
EX768345       --> CAGCCCATCATGTGTCAATCGTTCAGCCTTGGACCTTGGCTTTCTCATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD545413       --> CAGCCCATCATGTGTCAATCGTTCAGCCTTGGACCTTGGCTTTCTCATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719861       --> ..................................................  Raphanus sativus var. oleiformis

               251    -    301
UN14635        --> GTGCTTCCTTCGGTTTCTTCATCTGTCCCAGGATTCAGTGATGATATCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY454109       <-- GTGCTTCCTTCGGTTTCTTCATCTGTCCCAGGATTCAGTGATGATATCTT  Raphanus sativus cv GSK3-1
EX764426       <-- GTTCTTCCTTCGGTTTCTTCATCTGTCCCAGGATTCAGTGATGATATCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940609       <-- GTGCTTC-TTCGGTTTCTTCATCTGTCCCAGGATTCAGTGATGATATCTT  Raphanus sativus var. oleiformis
EW735108       <-- GTTCTTCCTTCGGTTTCTTCATCTGTCCCAGGATTCAGTGATGATATCTT  Raphanus sativus cv Rat-Tail Radish #3870
FD979350       <-- GTTCTTCTTTCGGTTTCTTCATCTGTCCCAGGATTCAGTGATGATATCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD572397       <-- GTGCTTCTTTCGGTTTCTTCATCTGTCCCAGGATTCAGTGATGATATCTT  Raphanus sativus cv Early Scarlet Globe
EX889182       <-- GTGCTTCTTTCGGTTTCTTCATCTGTCCCAGGATTCAGTGATGATATCTT  Raphanus sativus var. oleiformis
EY913267       <-- GTTCTTC-TTCGGTTTCTTCATCTGTCCCAGGATTCAGTGATGATATCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946769       <-- GTGCTTC-TTCGGTT-C-TCATCTGTCCCAGGATTCAGTGATGATATCTT  Raphanus sativus cv Rat-Tail Radish #3870
EY948918       <-- .................cTCATCTGTCC-AGGAT-CAGTGATGATATCTT  Raphanus sativus cv Rat-Tail Radish #3870
EY933115       <-- .....................TCTGTCCCAGGATTCAGTGATGATATCTT  Raphanus sativus var. oleiformis
FD971562       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW715199       <-- ..................................................  Raphanus sativus var. oleiformis
EX892971       --> GTGCTTCCTTCGGTTTCTTCATCTGTCCCAGGATTCAGTGATGATATCTT  Raphanus sativus var. oleiformis
EY942797       --> GTGCTTCCTTCGGTTTCTTCATCTGTCCCAGGATTCAGTGATGATATCTT  Raphanus sativus cv Rat-Tail Radish #3870
EY909527       --> GTTCTTCCTTCGGTTTCTTCATCTGTCCCAGGATTCAGTGATGATATCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928672       --> GTGCTTCCTTCGGTTTCTTCATCTGTCCCAGGATTCAGTGATGATATCTT  Raphanus sativus var. oleiformis
FD936452       --> GTGCTTCCTTCGGTTTCTTCATCTGTCCCAGGATTCAGTGATGATATCTT  Raphanus sativus var. oleiformis
EX768345       --> GTTCTTCCTTCGGTTTCTTCATCTGTCCCAGGATTCAGTGATGATATCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD545413       --> GTTCTTCCTTCGGTTTCTTCATCTGTCCCAGGATTCAGTGATGATATCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719861       --> ..................................................  Raphanus sativus var. oleiformis

               301    -    351
UN14635        --> TCCGAAGGACTCTTTTGCATCCCCAAAAAAGTCTTTCACTTTGTCCAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY454109       <-- TCCGAAGGACTCTTTTGCATCCCCAAAAAAGTCTTTCACTTTGTCCAATA
EX764426       <-- TCCGAAGGACTCTTTTGCATCCCCAAAAAAGTCTTTCACTTTGTCCAATA
FD940609       <-- TCCGAAGGACTCTTTTGCATCCCCAAAAAAGTCTTTCACTTTGTCCAATA
EW735108       <-- TCCGAAGGACTCTTTTGCATCCCCAAA--AGTCTTTCACTTTGTCCAATA
FD979350       <-- TCCGAAGGACTCTTTTGCATCCCCAAAAAAGTCTTTCACTTTGTCCAATA
FD572397       <-- TCCGAAGGACTCTTTTGCATCCCCAAAAAAGTCTTTCACTTTGTCCAATA
EX889182       <-- TCCGAAGGACTCTTTTGCATCCCCAAAAAAGTCTTTCACTTTGTCCAATA
EY913267       <-- TCCGAAGGACTCTTTTGCATCCCCAAAAAAGTCTTTCACTTTGTCCAATA
EY946769       <-- TCCGAAGGACTCTTTTGCATCCCCAAAAAAGTCTTTCACTTTGTCCAATA
EY948918       <-- TCCGAAGGACTCTTT-GCATCCCCAAAAAAGTCTTTCACTTTGTCCAATA
EY933115       <-- TCCGAAGGACTCTTT-GCATCCCCAAAAAAGTCTTTCACTTTGTCCAATA
FD971562       <-- ......GGACTCTTTTGCATCCCCAAAAA-GTCTTTCACTTTGTCCAATA
EW715199       <-- ..................................................
EX892971       --> TCCGAAGGACTCTTTTGCATCCCCAAAAAAGTCTTTCACTTTGTCCAATA
EY942797       --> TCCGAAGGACTCTTTTGCATCCCCAAAAAAGTCTTTCACTTTGTCCAATA
EY909527       --> TCCGAAGGACTCTTTTGCATCCCCAAAAAAGTCTTTCACTTTGTCCAATA
EY928672       --> TCCGAAGGACTCTTTTGCATCCCCAAAAAAGTCTTTCACTTTGTCCAATA
FD936452       --> TCCGAAGGACTCTTTTGCATCCCCAAAAAAGTCTTTCACTTTGTCCAATA
EX768345       --> TCCGAAGGACTCTTTTGCATCCCCAAAAAAGTCTTTCACTTTGTCCAATA
FD545413       --> TCCGAAGGACTCTTTTGCATCCCCAAAAAAGTCTTTCACTTTGTCCAATA
EW719861       --> ..................................................

               351    -    401
UN14635        --> CTGTTTTAAGCTGGTCCTGGGTTGGGAGCTCGATGACATCTGAAGTACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY454109       <-- CTGTTTTAAGCTGGTCCTGGGTTGGGAGCTCGATGACATCTGAAGTACTC  Raphanus sativus cv GSK3-1
EX764426       <-- CTGTTTTAAGCTGGTCCTGGGTTGGGAGCTCGATGACATCTGAGGTACTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940609       <-- CTGTTTTAAGCTGGTCCTGGGTTGGGAGCTCGATGACATCTGAAGTACTC  Raphanus sativus var. oleiformis
EW735108       <-- CTGTTTTAAGCTGGTCCTGGGTTGGGAGCTCGATGACATCTGAGGTACTA  Raphanus sativus cv Rat-Tail Radish #3870
FD979350       <-- CTGTTTTAAGCTGGTCCTGGGTTGGGAGCTCGATGACATCTGAGGTACTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD572397       <-- CTGTTTTAAGCTGGTCCTGGGTTGGGAGCTCGATGACATCTGAGGTACTA  Raphanus sativus cv Early Scarlet Globe
EX889182       <-- CTGTTTTAAGCTGGTCCTGGGTTGGGAGCTCGATGACATCTGAAGTACTC  Raphanus sativus var. oleiformis
EY913267       <-- CTGTTTTAAGCTGGTCCTGGGTTGGGAGCTCGATGACATCTGAGGTACTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946769       <-- CTGTTTTAAGCTAGTCCTGGGTTGGGAGCTCGATGACATCTGAAGTACTC  Raphanus sativus cv Rat-Tail Radish #3870
EY948918       <-- CTGTTTTAAGCTGGTCCTGGGTTGGGAGCTCGATGACATCTGAAGTACTC  Raphanus sativus cv Rat-Tail Radish #3870
EY933115       <-- CTGTTTTAAGCTGGTCCTGGGTTGGGAGCTCGATGACATCTCAAGTACTC  Raphanus sativus var. oleiformis
FD971562       <-- CTGTTTTAAGCTGGTCCTGGGTTGGGAGCTCGATGACATCTGAGGTACTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW715199       <-- ..................................................  Raphanus sativus var. oleiformis
EX892971       --> CTGTTTTAAGCTGGTCCTGGGTTGGGAGCTCGATGACATCTGAAGTACTC  Raphanus sativus var. oleiformis
EY942797       --> CTGTTTTAAGCTAGTCCTGGGTTGGGAGCTCGATGACATCTGAAGTACTC  Raphanus sativus cv Rat-Tail Radish #3870
EY909527       --> CTGTTTTAAGCTGGTCCTGGGTTGGGAGCTCGATGACATCTGAGGTACTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928672       --> CTGTTTTAAGCTGGTCCTGGGTTGGGAGCTCGATGACATCTCAAGTACTC  Raphanus sativus var. oleiformis
FD936452       --> CTGTTTTAAGCTGGTCCTGGGTTGGGAGCTCGATGACATCTGAAGTACTC  Raphanus sativus var. oleiformis
EX768345       --> CTGTTTTAAGCTGGTCCTGGGTTGGGAGCTCGATGACATCTGAGGTACTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD545413       --> CTGTTTTAAGCTGGTCCTGGGTTGGGAGCTCGATGACATCTGAGGTACTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719861       --> ..................................................  Raphanus sativus var. oleiformis

               401    -    451
UN14635        --> AGTGCAGCTCTCATATTTCCATTTTCAACAAGTTTGTAGCCATATCGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY454109       <-- AGTGCAGCTCTCATATTTCCATTTTCAACAAGTTTGTAGCCATATCGAAA
EX764426       <-- AGTGCAGCTCTCATATTTCCATTTTCAACAAGTTTGTAGCCATATCGAAA
FD940609       <-- AGTGCAGCTCTCATATTTCCATTTTCAACAAGTTTGTAGCCATATCGAAA
EW735108       <-- AGTGCAGCTCTCATATTTCCATTTTCAACAAGTTTGTAGCCATATCGAAA
FD979350       <-- AGTGCAGCTCTCATATTTCCATTTTCAACAAGTTTGTAGCCATATCGAAA
FD572397       <-- AGTGCAGCTCTCATATTTCCATTTTCAACAAGTTTGTAGCCATAACGAAA
EX889182       <-- AGTGCAGCTCTCATATTTCCATTTTCAACAAGTTTGTAGCCATATCGAAA
EY913267       <-- AGTGCAGCTCTCATATTTCCATTTTCAACAAGTTTGTAGCCATATCGAAA
EY946769       <-- AGTGCAGCTCTCATATTTCCATTTTCAACAAGTTTGTAGCCATATCGAAA
EY948918       <-- AGTGCAGCTCTCATATTTCCATTTTCAACAAGTTTGTAGCCATATCGAAA
EY933115       <-- AGTGCAGCTCTCATATTTCCATTTTCAACAAGTTTGTAGCCATATCGAAA
FD971562       <-- AGTGCAGCTCTCATATTTCCATTTTCAACAAGTTTGTAGCCATATCGAAA
EW715199       <-- ..................................................
EX892971       --> AGTGCAGCTCTCATATTTCCATTTTCAACAAGTTTGTAGCCATATCGAAA
EY942797       --> AGTGCAGCTCTCATATTTCCATTTTCAACAAGTTTGTAGCCATATCGAAA
EY909527       --> AGTGCAGCTCTCATATTTCCATTTTCAACAAGTTTGTAGCCATATCGAAA
EY928672       --> AGTGCAGCTCTCATATTTCCATTTTCAACAAGTTTGTAGCCATATCGAAA
FD936452       --> AGTGCAGCTCTCATATTTCCATTTTCAACAAGTTTGTAGCCATATCGAAA
EX768345       --> AGTGCAGCTCTCATATTTCCATTTTCAACAAGTTTGTAGCCATATCGAAA
FD545413       --> AGTGCAGCT.........................................
EW719861       --> ..................................................

               451    -    501
UN14635        --> CTCAGTGGCAGTCCGCAAGACACGATGCTGCTTAATTGCTGTCTTTTGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY454109       <-- CTCAGTGGCAGTCCGCAAGACACGATGCTGCTTAATTGCTGTCTTTTGTA  Raphanus sativus cv GSK3-1
EX764426       <-- CTCAGTGGCTGTCCGCAAGACACGATGCTGCTTAATTGCTGTCTTTTGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940609       <-- CTCAGTGGCAGTCCGCAAGACACGATGCTGCTTAATTGCTGTCTTTTGTA  Raphanus sativus var. oleiformis
EW735108       <-- CTCAGTGGCTGTCCGCAAGACATGATGCTGCTTAATTGCTGTCTTTTGTA  Raphanus sativus cv Rat-Tail Radish #3870
FD979350       <-- CTCAGTGGCTGTCCGCGAGACACGATGCTGCTTAATTGCTGTCTTTTGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD572397       <-- CTCAGTGGCAGTCCGCAAGACACGATGCTGCTTTATTGCTGTCTTTTGTA  Raphanus sativus cv Early Scarlet Globe
EX889182       <-- CTCAGTGGCAGTCCGCAAGACACGATGCTGCTTAATTGCTGTCTTTTGTA  Raphanus sativus var. oleiformis
EY913267       <-- CTCAGTGGCTGTCCGCAAGACACGATGCTGCTTAATTGCTGTCTTTTGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946769       <-- CTCAGTGGCAGTCCGCAAGACACGATGCTGCTTAATTGCTGTCTTTTGTA  Raphanus sativus cv Rat-Tail Radish #3870
EY948918       <-- CTCAGTGGCAGTCCGCAAGACACGATGCTGCTTAATTGCTGTCTTTTGTA  Raphanus sativus cv Rat-Tail Radish #3870
EY933115       <-- CTCAGTGGCAGTCCGCAAGACACGATGCTGCTTAATTGCTGTCTTTTGTA  Raphanus sativus var. oleiformis
FD971562       <-- CTCAGTGGCTGTCCGCAAGACACGATGCTGCTTAATTGCTGTCTTTTGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW715199       <-- ..................................................  Raphanus sativus var. oleiformis
EX892971       --> CTCAGTGGCAGTCCGCAAGACACGATGCTGCTTAATTGCTGTCTTTTGTA  Raphanus sativus var. oleiformis
EY942797       --> CTCAGTGGCAGTCCGCAAGACACGATGCTGCTTAATTGCTGTCTTTTGTA  Raphanus sativus cv Rat-Tail Radish #3870
EY909527       --> CTCAGTGGCTGTCCGCAAGACACGATGCTGCTTAATTGCTGTCTTTTGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928672       --> CTCAGTGGCAGTCCGCAAGACACGATGCTGCTTAATTGCTGTCTTTTGTA  Raphanus sativus var. oleiformis
FD936452       --> CTCAGTGGCAGTCCGCAAGACACGATGCTGCTTAATTGCTGTCTTTTGTA  Raphanus sativus var. oleiformis
EX768345       --> CTCAGTGGCTGTCCGCAAGACACGATGCTGCTTAATTGCTGTCTTTTGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD545413       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719861       --> .................AGACACGATGCTGCTTAATTGCTGTCTTTTGTA  Raphanus sativus var. oleiformis

               501    -    551
UN14635        --> TCTCCTTCTCATCTCTGTAAATAACAGCAGCAATATTTCTAGCAATGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY454109       <-- TCTCCTTCTCATCTCTGTAAATAACAGCAGCAATATTTCTAGCAATGGTG
EX764426       <-- TCTCCTTCTCATCTCTGTAAATA...........................
FD940609       <-- TCTCCTTCTCATCTCTGTAAATAACAGCAGCAATATTTCTAGCAATGGTG
EW735108       <-- TCTCCTTCTCATCTCTGTAAATAACAGCAGCAATATTTCTAGCAATGGTG
FD979350       <-- TCTCCTTCTCATCTCTGTAAATAACAGCAGCAATATTTCTAGCAATGGTG
FD572397       <-- TCTCCTTCTCATCTCTATAAATAACAGCAGCAATATTTCTTGCAATGGTG
EX889182       <-- TCTCCTTCTCATCTCTGTAAATAACAGCAGCAATATTTCTAGCAATGGTG
EY913267       <-- TCTCCTTCTCATCTCTGTAAATAACAGCAGCAATATTTCTAGCAATGGTG
EY946769       <-- TCTCCTTCTCATCTCTGTAAATAACAGCAGCAATATTTCTAGCAATGGTG
EY948918       <-- TCTCCTTCTCATCTCTGTAAATAACAGCAGCAATATTTCTAGCAATGGTG
EY933115       <-- TCTCCTTCTCATCTCTGTAAATAACAGCAGCAATATTTCTAGCAATGGTG
FD971562       <-- TCTCCTTCTCATCTCTGTAAATAACAGCAGCAATATTTCTAGCAATGGTG
EW715199       <-- ..................................................
EX892971       --> TCTCCTTCTCATCTCTGTAAATAACAGCAGCAATATTTCTAGCAATGGTG
EY942797       --> TCTCCTTCTCATCTCTGTAAATAACAGCAGCAATATTTCTAGCAATGGTG
EY909527       --> TCTCCTTCTCATCTCTGTAAATAACAGCAGCAATATTTCTAGCAATGGTG
EY928672       --> TCTCCTTCTCATCTCTGTAAATAACAGCAGCAATATTTCTAGCAATGGTG
FD936452       --> TCTCCTTCTCATCTCTGTAAATAACAGCAGCAATATTTCTAGCAATGGTG
EX768345       --> TCTCCTTCTCATCTCTGTAAATAACAGCAGCAATATTc............
FD545413       --> ..................................................
EW719861       --> TCTCCTTCTCATCTCTGTAAATAACAGCACCAATATTTCTAGCAATGGTG

               551    -    601
UN14635        --> TCTTTGTATATATACTTCCCCAAGAGGTTGTCTTTAGCAGCAACCATGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY454109       <-- TCTTTGTATATATACTTCCCCAAGAGGTTGTCTTTAGCAGCAACCATGAT  Raphanus sativus cv GSK3-1
EX764426       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940609       <-- TCTTTGTATATATACTTCCCCAAGAGGTTGTCTTTAGCAGCAACCATGAT  Raphanus sativus var. oleiformis
EW735108       <-- TCTTTATAGATATACTTCCCCAAGAGGTTGTCTTTAGCAGCAACCATGAT  Raphanus sativus cv Rat-Tail Radish #3870
FD979350       <-- TCTTTATAGATATACTTCCCCAAGAGGTTGTCTTTAGCAGCAACCATGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD572397       <-- TCTTTGTATATATACTTCCCCAAGAGGTTGTCTTTAGCAGCAACCATGAT  Raphanus sativus cv Early Scarlet Globe
EX889182       <-- TCTTTGTATATATACTTCCCCAAGAGGTTGTCTTTAGCAGCAACCATGAT  Raphanus sativus var. oleiformis
EY913267       <-- TCTTTATAGATATACTTCCCCAAGAGGTTGTCTTTAGCAGCAACCATGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946769       <-- TCTTTGTATATATACTTCCCCAAGAGGTTGTCTTTAGCAGCAACCATGAT  Raphanus sativus cv Rat-Tail Radish #3870
EY948918       <-- TCTTTGTATATATACTTCCCCAAGAGGTTGTCTTTAGCAGCAACCATGAT  Raphanus sativus cv Rat-Tail Radish #3870
EY933115       <-- TCTTTGTATATATACTTCCCCAAGAGGTTGTCTTTAGCAGCAACCATGAT  Raphanus sativus var. oleiformis
FD971562       <-- TCTTTATAGATATACTTCCCCAAGAGGTTGTCTTTAGTAGCAACCATGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW715199       <-- ..................................................  Raphanus sativus var. oleiformis
EX892971       --> TCTTTGTATATATACTTCCCCAAGAGGTTGTCTTTAGCAGCAACCATGAT  Raphanus sativus var. oleiformis
EY942797       --> TCTTTGTATATATACTTCCCCAAGAGGTTGTCTTTAGCAGCAACCATGAT  Raphanus sativus cv Rat-Tail Radish #3870
EY909527       --> TCTTTATAGATATACTTCCCCAAGAGGTTGTCTTTAGCAGCAACCATGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928672       --> TCTTTGTATATATACTTCCCCAAGAGGTTGTCTTTAGCAGCAACCATGAT  Raphanus sativus var. oleiformis
FD936452       --> TCTTTGTATATATACTTCCCCAAGAGGTTGTCTTT...............  Raphanus sativus var. oleiformis
EX768345       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD545413       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719861       --> TCTTTGTATATATACTTCCCCAAGAGGTTGTCTTTAGCATCAACCATGAT  Raphanus sativus var. oleiformis

               601    -    651
UN14635        --> CTTAGCAGTTGTACCTCCGGCTATTATACTGAGAGGGTACCAAAGATACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY454109       <-- CTTAGCAGTTGTACCTCCGGCTATTATACTGAGAGGGTACCAAAGATACA  Raphanus sativus cv GSK3-1
EX764426       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940609       <-- CTTAGCAGTTGTACCTCCGGCTATTATACTGAGAGGGTACCAAAGATACA  Raphanus sativus var. oleiformis
EW735108       <-- CTTGGCAGTTGTACCTCCAGCTATTATACTGAGAGGATACCAAAGATACA  Raphanus sativus cv Rat-Tail Radish #3870
FD979350       <-- CTTGGCAGTTGTACCTCCAGCTATTATACTGAGAGGATACCAAAGATACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD572397       <-- CTTAGCAGTTGTACCTCCGGCTATTATACTGAGAGGGTACCAAAGATACA  Raphanus sativus cv Early Scarlet Globe
EX889182       <-- CTTAGCAGTTGTACCTCCGGCTATTATACTGAGAGGGTACCAAAGATACA  Raphanus sativus var. oleiformis
EY913267       <-- CTTGGCAGTTGTACCTCCAGCTATTATACTGAGAGGATACCAAAGATACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946769       <-- CTTAGCAGTTGTACCTCCGGCTATTATACTGAGAGGGTACCAAAGATACA  Raphanus sativus cv Rat-Tail Radish #3870
EY948918       <-- CTTAGCAGTTGTACCTCCGGCTATTATACTGAGAGGGTACCAAAGATACA  Raphanus sativus cv Rat-Tail Radish #3870
EY933115       <-- CTTAGCAGTTGTACCTCCGGCTATTATACTGAGAGGGTACCAAAGATACA  Raphanus sativus var. oleiformis
FD971562       <-- CTTGGCAGTTGTACCTCCAGCTATTATACTGAGAGGATACCAAAGATACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW715199       <-- ...............................AGAGGGTACCAAAGATACA  Raphanus sativus var. oleiformis
EX892971       --> CTTAGCAGTTGTACCTCCGGCTATTATACTGAGAGGGTACCAAAGATACA  Raphanus sativus var. oleiformis
EY942797       --> CTTAGCAGTTGTACCTCCGGCTATTATACTGAGAGGGTACCAAAGATACA  Raphanus sativus cv Rat-Tail Radish #3870
EY909527       --> CTTGGCAGTTGTACCTCCAGCTATTATACTGAGAGGATACCAAAGATACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928672       --> CTTAGCAGTTGTACCTCCGGCTATTATACTGAGAGGGTACCAAAGATACA  Raphanus sativus var. oleiformis
FD936452       --> ..................................................  Raphanus sativus var. oleiformis
EX768345       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD545413       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719861       --> CTTAGCAGTTGTACCTC.................................  Raphanus sativus var. oleiformis

               651    -    701
UN14635        --> CGTTGGCCATACGAATGAAGATAACGAATCTAGGGTTTCCGTCGTCTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY454109       <-- CGTTGGCCATACGAATGAAGATAACGAATCTAGGGTTTCCGTCGTCTTCA
EX764426       <-- ..................................................
FD940609       <-- CGTTGGCCATACGAATGAAGATAACGAATCTAGGGTTTCCGTCGTCTTCA
EW735108       <-- CGTTGGCCATACGAATGAAGATAACGAATCTAGGGTTTCCGTCGTCTTCA
FD979350       <-- CGTTGGCCATACGAATGAAGATAACGAATCTAGGGTTTCCGTCGTCTTCA
FD572397       <-- CGTTGGCCATACGAATGAAGATAACGAATCTAGGGTTTCCGTCGTCTTCA
EX889182       <-- CGTTGGCCGTACGAATGAAGATAACGAATCTAGGGTTTCCGTCGTCTTCA
EY913267       <-- CGTTGGCCATACGAATGAAGATAACGAATATAGGGTTTCCGTCGTCTTCA
EY946769       <-- CGTTGGCCATACGAATGAAGATAACGAATCTAGGGTTTCCGTCGTCTTCA
EY948918       <-- CGTTGGCCATACGAATGAAGATAACGAATCTAGGGTTTCCGTCGTCTTCA
EY933115       <-- CGTTGGCCATACGAATGAAGATAACGAATCTAGGGTTTCCGTCGTCTTCA
FD971562       <-- CGTTGGCCATACGAATGAAGATAACGAATCTAGGGTTTCCGTCGTCTTCA
EW715199       <-- CGTTGGCCATACGAATGAAGATAACGAATCTAGGGTTTCCGTCGTCTTCA
EX892971       --> CGTTGGCCGTACGAATGAAGATAACGAATCTAGGGTTTCCGTCGTCTTCA
EY942797       --> CGTTGGCCATACGAATGAAGATAACGAATCTAGGGTTTCCGTCGTCTTCA
EY909527       --> CGTTGGCCATACGAATGAAGATAACGAATATAGGGTTTCCGTCGTCTTCA
EY928672       --> CGTTGGCCATACGAATGAAGATAACGAATCTAGGGTTTCCGTCGTCTTCA
FD936452       --> ..................................................
EX768345       --> ..................................................
FD545413       --> ..................................................
EW719861       --> ..................................................

               701    -    751
UN14635        --> ATCTTAGGCATAGGGGGAGGCGTACGTTGATACTGACGCGCCGCCATACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY454109       <-- ATCTTAGGCATAGGGGGAGGCGTACGTTGATACTGACGCGCCGCCATACC  Raphanus sativus cv GSK3-1
EX764426       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940609       <-- ATCTTAGGCATAGGGGGAGGCGTACGTTGATACTGACGCGCCGCCATACC  Raphanus sativus var. oleiformis
EW735108       <-- ATCTTAGGCATAGGGGGAGGCGTACGTTGATACTGACGCGCTGCCATACC  Raphanus sativus cv Rat-Tail Radish #3870
FD979350       <-- ATCTTAGGCATAGGGGGAGGCGTACGTTGATACTGACGCGCTGCCATACC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD572397       <-- ATCTTAGGCATAGGGGGAGGCGTACGTTGATACTGACGCGCCGCCATACC  Raphanus sativus cv Early Scarlet Globe
EX889182       <-- ATCTTAGGCATAGGGGGAGGCGTACGTTGATACTGACGCGCCGCCATACC  Raphanus sativus var. oleiformis
EY913267       <-- ATCTTAGGCATAGGGGGAGGCGTACGTTGATACTGACGCGCTGCCATACC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946769       <-- ATCTTAGGCATAGGGGGAGGCGTACGTTGATACTGACGCGCCGCCATACC  Raphanus sativus cv Rat-Tail Radish #3870
EY948918       <-- ATCTTAGGCATAGGGGGAGGCGTACGTTGATACTGACGCGCCGCCATACC  Raphanus sativus cv Rat-Tail Radish #3870
EY933115       <-- ATCTTAGGCATAGGGGGAGGCGTACGTTGATACTGACGCGCCGCCATACC  Raphanus sativus var. oleiformis
FD971562       <-- ATCTTAGGCATAGGGGGAGGCGTACGTTGATACTGACGCGCTGCCATACC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW715199       <-- ATCTTAGGCATAGGGGGAGGCGTACGTTGATACTGACGCGCCGCCATACC  Raphanus sativus var. oleiformis
EX892971       --> ATCTT.............................................  Raphanus sativus var. oleiformis
EY942797       --> ATCTTAGGCATAGGGGGAGGCGTACGTTGATACTGACGCGCCGCCATACC  Raphanus sativus cv Rat-Tail Radish #3870
EY909527       --> ATCTTAGGCATAGGGGGAGGCGTACGTTGATACTGACGCGCTGCCATACC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY928672       --> ATCTTAGGCATA......................................  Raphanus sativus var. oleiformis
FD936452       --> ..................................................  Raphanus sativus var. oleiformis
EX768345       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD545413       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW719861       --> ..................................................  Raphanus sativus var. oleiformis

               751    -    801
UN14635        --> TTTCTTCCCCTTCGCCTCCACCACTAAAACCCTCCTCCGCTGCTGCGCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY454109       <-- TTTCTTCCCCTTCGCCTCCACCACTAAAACCCTCCTCCGCTGCTGCGCCT
EX764426       <-- ..................................................
FD940609       <-- TTTCTTCCCCTTCGCCTCCACCACTAAAACCCTCCTCCGCTGCTGCGCCT
EW735108       <-- TTTCTTCCCCTTCGCCTCCACCACTAAAACCCTCCTCCGCTGCTGCGCCT
FD979350       <-- TTTCTTCCCCTTCGCCTCCACCACTAAAACCCTCCTCCGCTGCTGCGCCT
FD572397       <-- TTTCTTCCCCTTCGCCTCCACCACTAAAACCCTCCTCCGCTGCTGCGCCT
EX889182       <-- TTTCTTCCCCTTCGCCTCCACCACTAAAACCCTCCTCCGCTGCTGCGCCT
EY913267       <-- TTTCTTCCCCTTCGCCTCCACCACTAAAACCCTCCTCCGCTGCTGCGCCT
EY946769       <-- TTTCTTCCCCTTCGCCTCCACCACTAAAACCCTCCTCCGCTGCTGCGCCT
EY948918       <-- TTTCTTCCCCTTCGCCTCCACCACTAAAACCCTCCTCCGCTGCTGCGCCT
EY933115       <-- TTTCTTCCCCTTCGCCTCCACCACTAAAACCCTCCTCCGCTGCTGCGCCT
FD971562       <-- TTTCTTCCCCTTCGCCTCCACCACTAAAACCCTCCTCCGCTGCTGCGCCT
EW715199       <-- TTTCTTCCCCTTCGCCTCCACCACTAAAACCCTCCTCCGCTGCTGCGCCT
EX892971       --> ..................................................
EY942797       --> TTTCTTCCCCTTCGCCTCCACCACTAAAACCCTCCTCCGCTGCTGCGCCT
EY909527       --> TTTCTTCCCCTTCGCCTCCACCACTAAAACCCTCCTCCGCTGCTGCGCCT
EY928672       --> ..................................................
FD936452       --> ..................................................
EX768345       --> ..................................................
FD545413       --> ..................................................
EW719861       --> ..................................................

               801    -    851
UN14635        --> TCTCTTGGCATGGCGTTCTCGAGGAGGTGAACAGAGAGTGTCTCGCTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY454109       <-- TCTCTTGGCATGGCGTTCTCGAGGAGGTGAACAGAGAGTGTCTCGCTAAA
EX764426       <-- ..................................................
FD940609       <-- TCTCTTGGCATGGCGTTCTCGAGGAGGTGAACAGAGAGTGTCTCGCTAAA
EW735108       <-- TCTCTTGGCATGGCGTTCTCGAGGAGc.......................
FD979350       <-- TCTCTTGGCATGGCGTTCTCGAGGAGGTGAACAGAGAGTGTCTCGCTAAA
FD572397       <-- TCTCTTGGCATGGCGTTCTCGAGGAGGTGAACAGAGAGTGTCTCGCTAAA
EX889182       <-- TCTCTTGGCATGGCGTTCTCGAGGAGGTGAACAGAGAGTGTCTCGCTAAA
EY913267       <-- TCTCTTGGCATGGAGTTCTCGAGGAGGTGAACAGAGAGTGTCTCGCTAAA
EY946769       <-- TCTCTTGGCATGGCGTTCTCGAGGAGGTGAACAGAGAGTGTCTCGCTAAA
EY948918       <-- CCTCTTGGCATGGCGTTCTCGAGGAGGTGAACAGAGAGTGTCTCGCTAAA
EY933115       <-- TCTCTTGGCATGGCGTTCTCGAGGAGGTGAACAGAGAGTGTCTCGCTAAA
FD971562       <-- TCTCTTGGCATGGCGTTCTCGAGGAGGTGAACAGAGAGTGTCTCGCTAAA
EW715199       <-- TCTCTTGGCATGGCGTTCTCGAGGAGGTGAACAGAGAGTGTCTCGCTAAA
EX892971       --> ..................................................
EY942797       --> TCTCTTGGCATGGCGTTCT...............................
EY909527       --> TCTCTTGG..........................................
EY928672       --> ..................................................
FD936452       --> ..................................................
EX768345       --> ..................................................
FD545413       --> ..................................................
EW719861       --> ..................................................

               851    -    901
UN14635        --> CCGAACTCTTCTAGTCTTCCCGTGTTCTTCAGTGGAAGCCGAGTTAACGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY454109       <-- CCGAACTCTTCTAGTCTTCCCGTG..........................
EX764426       <-- ..................................................
FD940609       <-- CCGAACTCTTCTAGTCTTCCCGTGTTCTTCAGTGGAAGCCGAGTTAACGC
EW735108       <-- ..................................................
FD979350       <-- CCGAACTCTTCGAGTCTCCCCGTGTTCTTCAGTGGAAGCCGAGTTAACGC
FD572397       <-- CCGAACTCTTCTAGTCTTCCCGTGTTCTTCAGTGGAAGCCGAGTTAACGC
EX889182       <-- CCGAACTCTTCTAGTCTTCCCGTGTTCTTCAGTGGAAGCCGAGTTAACGC
EY913267       <-- CCGAACTCTTCGAGTCTTCCCGTGTTCTTCAGTGGAAGCCGAGTTAACGC
EY946769       <-- CCGAGCTCCTCTAGTCTTCCCGTGTTCTTCAGTGGAAGCCGAGTTAACGC
EY948918       <-- CCGAACTCTTCTAGTCTTCCCGTGTTCTTCAGTGGAAGCCGAGTTAACGC
EY933115       <-- CCGAACTCTTCTAGTCTTCCCGTGTTCTTCAGTGGAAGCCGAGTTAACGC
FD971562       <-- CCGAACTCTTCGAGTCTTCCCGTGTTCTTCAGTGGAAGCCGAGTTAACGC
EW715199       <-- CCGAACTCTTCTAGTCTTCCCGTGTTCTTCAGTGGAAGCCGAGTTAACGC
EX892971       --> ..................................................
EY942797       --> ..................................................
EY909527       --> ..................................................
EY928672       --> ..................................................
FD936452       --> ..................................................
EX768345       --> ..................................................
FD545413       --> ..................................................
EW719861       --> ..................................................

               901    -    951
UN14635        --> GTTGAGGGACATACTTGCCTCCATTTGAGCACGTAGATTCACCAACTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY454109       <-- ..................................................
EX764426       <-- ..................................................
FD940609       <-- GTTGAGGGACATACTTGCCTCCATTTGAGCACGTAGATTCc.........
EW735108       <-- ..................................................
FD979350       <-- GTTGAGAGACATACTTACCTCC............................
FD572397       <-- GTTGAGGGACATACTTGCCTCCATTTGAGCACGTAGATTCACCGACTGGA
EX889182       <-- GTTGAGGGACATACTTGCCTCCATTTcc......................
EY913267       <-- GTTGAGAGACATACTTACCTCCATTTcaccaactggagttttgggggatc
EY946769       <-- GTTGAGGGACATACTTGCCTCCATTTGAGCACGTcc..............
EY948918       <-- GTTGAGGGACATACTTGCCTCCATTTGAGCACGTAGATTCGCCAACTGGA
EY933115       <-- GTTGAGGGACATACTTGCCTCCATTTGAGCACGTAGATTCACCAACTGGA
FD971562       <-- GTTGAGAGACATACTTACCTCCATTTcaccaactggagttttgggggatc
EW715199       <-- GTTGAGGGACATACTTGCCTCCATTTGAGCACGTAGATTCACCAACTGGA
EX892971       --> ..................................................
EY942797       --> ..................................................
EY909527       --> ..................................................
EY928672       --> ..................................................
FD936452       --> ..................................................
EX768345       --> ..................................................
FD545413       --> ..................................................
EW719861       --> ..................................................

               951    -   1001
UN14635        --> GTTTTTTTTGGGGATCCTGATGACGATGTCGTGGATCGTCACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY454109       <-- ...........................................
EX764426       <-- ...........................................
FD940609       <-- ...........................................
EW735108       <-- ...........................................
FD979350       <-- ...........................................
FD572397       <-- GGTTTTTTTGGGGATCC..........................
EX889182       <-- ...........................................
EY913267       <-- c..........................................
EY946769       <-- ...........................................
EY948918       <-- GTTTTTTTTGGGGATGATGATGACGATGTCGTGGATCGTCACC
EY933115       <-- GTTTTTTTTGGG...............................
FD971562       <-- c..........................................
EW715199       <-- GTTTTTTTTGGGGATCC..........................
EX892971       --> ...........................................
EY942797       --> ...........................................
EY909527       --> ...........................................
EY928672       --> ...........................................
FD936452       --> ...........................................
EX768345       --> ...........................................
FD545413       --> ...........................................
EW719861       --> ...........................................