RadishBase

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Alignment for radish unigene UN14642

               1      -     51
UN14642        --> TTTTTCTCTTACTTTTCTGGAGACGAAAATGCAAACATCAGCTGCGTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443400       <-- ..................................................
FD945474       <-- ..................................................
EY893358       <-- ..................................................
FD984263       <-- ..................................................
EV540617       <-- ..................................................
EV570965       <-- ..................................................
EV570966       <-- ..................................................
EY919830       <-- ..................................................
EY920732       <-- ..................................................
EY896924       --> TTTTTCTCTTACTTTTCTGGAGACGAAAATGCAAACATCAGCTGCGTCAG
EV565687       --> .....CTCTTACTTTTCTGGAGACGAAAATGCAAACATCAGCTGCGTCAG
EV565666       --> ........ggACTTTTCTGGAGACGAAAATGCAAACATCAGCTGCGTCAG
EV565667       --> ........ggACTTTTCTGGAGACGAAAATGCAAACATCAGCTGCGTCAG
EV565686       --> ..................................................
FD949889       --> ..................................................
EY924122       --> ..................................................
EY925208       --> ..................................................
FD988359       --> ..................................................
EV536093       --> ..................................................

               51     -    101
UN14642        --> CAATAGTTTCAGGAGCTATAGCTGTTGTACTGTGGTGGATATGGAAAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443400       <-- ..................................................
FD945474       <-- ..................................................
EY893358       <-- ..................................................
FD984263       <-- ..................................................
EV540617       <-- ..................................................
EV570965       <-- ..................................................
EV570966       <-- ..................................................
EY919830       <-- ..................................................
EY920732       <-- ..................................................
EY896924       --> CAACAGTTTCAGGAGCTATAGCTGTCGTACTGTGGTGGATATGGAAAACT
EV565687       --> CAATAGTTTCAGGAGCTATAGCTGTTGTACTGTGGTGGATATGGAAAACT
EV565666       --> CAATAGTTTCAGGAGCTATAGCTGTTGTACTGTGGTGGATATGGAAAACT
EV565667       --> CAATAGTTTCAGGAGCTATAGCTGTTGTACTGTGGTGGATATGGAAAACT
EV565686       --> ..................................................
FD949889       --> ..................................................
EY924122       --> ..................................................
EY925208       --> ..................................................
FD988359       --> ..................................................
EV536093       --> ..................................................

               101    -    151
UN14642        --> CTAAAGTGGGTTTGGTTTGAACCAAAGATGCTTGAAAGTTACCTGAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443400       <-- ..................................................
FD945474       <-- ..................................................
EY893358       <-- ..................................................
FD984263       <-- ..................................................
EV540617       <-- ..................................................
EV570965       <-- ..................................................
EV570966       <-- ..................................................
EY919830       <-- ..................................................
EY920732       <-- ..................................................
EY896924       --> CTAAAGTGGGTTTGGTTTGAACCAAAGATGCTTGAAAGTTACCTGAGAAG
EV565687       --> CTAAAGCGGGTTTGGTTTGAACCAAAGATGCTTGAAAGTTACCTGAGAAG
EV565666       --> CTAAAGTGGGTTTGGTTTGAACCAAAGATGCTTGAAAGTTACCTGAGAAG
EV565667       --> CTAAAGTGGGTTTGGTTTGAACCAAAGATGCTTGAAAGTTACCTGAGAAG
EV565686       --> ..................................................
FD949889       --> ..................................................
EY924122       --> ..................................................
EY925208       --> ..................................................
FD988359       --> ..................................................
EV536093       --> ..................................................

               151    -    201
UN14642        --> ACAGGGCATTGCCGGAACTCCTTACACGCCACTCGTCGGAGATATGAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443400       <-- ..................................................
FD945474       <-- ..................................................
EY893358       <-- ..................................................
FD984263       <-- ..................................................
EV540617       <-- ..................................................
EV570965       <-- ..................................................
EV570966       <-- ..................................................
EY919830       <-- ..................................................
EY920732       <-- ..................................................
EY896924       --> ACAGGGCATTGCCGGAACTCCTTACACGCCACTCGTCGGAGATATGAGAA
EV565687       --> ACAGGGCATTGCCGGAACTCCTTACACGCCACTCGTCGGAGATATGAGAA
EV565666       --> ACAGGGCATTGCCGGAACTCCTTACACGCCACTCGTCGGAGATATGAGAA
EV565667       --> ACAGGGCATTGCCGGAACTCCTTACACGCCACTCGTCGGAGATATGAGAA
EV565686       --> ..................................................
FD949889       --> ..................................................
EY924122       --> ..................................................
EY925208       --> ..................................................
FD988359       --> ..................................................
EV536093       --> ..................................................

               201    -    251
UN14642        --> CGAACAATAGGATGACAAACGAGGCAAGGTCCAAACCCATCAAACTAACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443400       <-- ..................................................
FD945474       <-- ..................................................
EY893358       <-- ..................................................
FD984263       <-- ..................................................
EV540617       <-- ..................................................
EV570965       <-- ..................................................
EV570966       <-- ..................................................
EY919830       <-- ..................................................
EY920732       <-- ..................................................
EY896924       --> CGAACAATAGGATGACAAACGAGGCAAGGTCCAAACCCATCAAACTAACG
EV565687       --> CGAACAATAGGATGACAAACGAGGCAAGGTCCAAACCCATCAAACTAACG
EV565666       --> CGAACAATAGGATGACAAACGAGGCAAGGTCCAAACCCATCAAACTAACG
EV565667       --> CGAACAATAGGATGACAAACGAGGCAAGGTCCAAACCCATCAAACTAACG
EV565686       --> ..................................................
FD949889       --> ..................................................
EY924122       --> ..................................................
EY925208       --> ..................................................
FD988359       --> ..................................................
EV536093       --> ..................................................

               251    -    301
UN14642        --> GATGATATCATCCCACGTGTCTTGCCTTTCTCCTCGCACATGCTCAAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443400       <-- ..................................................
FD945474       <-- ..................................................
EY893358       <-- ..................................................
FD984263       <-- ..................................................
EV540617       <-- ..................................................
EV570965       <-- ..................................................
EV570966       <-- ..................................................
EY919830       <-- ..................................................
EY920732       <-- ..................................................
EY896924       --> GATGATATCATCCCACGTGTCCTGCCTTTCTCCTCGCACATGCTCAAGAC
EV565687       --> GATGATATCATCCCACGTGTCTTGCCTTTCTCCTCGCACATGCTCAAGAC
EV565666       --> GATGATATCATCCCACGTGTCTTGCCTTTCTCCTCGCACATGCTCAAGAC
EV565667       --> GATGATATCATCCCACGTGTCTTGCCTTTCTCCTCGCACATGCTCAAGAC
EV565686       --> ..................................................
FD949889       --> ..................................................
EY924122       --> ..................................................
EY925208       --> ..................................................
FD988359       --> ..................................................
EV536093       --> ..................................................

               301    -    351
UN14642        --> TTACGGAAGAACTTTCTTTACATGGCGTGGAACTATACCAACCATTACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443400       <-- ..................................................
FD945474       <-- ..................................................
EY893358       <-- ..................................................
FD984263       <-- ..................................................
EV540617       <-- ..................................................
EV570965       <-- ..................................................
EV570966       <-- ..................................................
EY919830       <-- ..................................................
EY920732       <-- ..................................................
EY896924       --> TTACGGAAGAACTTTCTTTACATGGCGTGGAACTATACCAACCATTACCA
EV565687       --> TTACGGAAGAACTTTCTTTACATGGCGTGGAACTATACCAACCATTACCA
EV565666       --> TTACGGAAGAACTTTCTTTACATGGCGTGGAACTATACCAACCATTACCA
EV565667       --> TTACGGAAGAACTTTCTTTACATGGCGTGGAACTATACCAACCATTACCA
EV565686       --> ..................................................
FD949889       --> ..................................................
EY924122       --> ..................................................
EY925208       --> ..................................................
FD988359       --> ..................................................
EV536093       --> ..................................................

               351    -    401
UN14642        --> TTACGGATCCTGAGCAAATCAAGGAAGTGTTCAACAAAGTTTATGATTT-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443400       <-- ..................................................
FD945474       <-- ..................................................
EY893358       <-- ..................................................
FD984263       <-- ..................................................
EV540617       <-- ..................................................
EV570965       <-- ..................................................
EV570966       <-- ..................................................
EY919830       <-- ..................................................
EY920732       <-- ..................................................
EY896924       --> TTACGGATCCTGAGCAAATCAAGGAAGTGTTCAACAAAGTTTATGATTT-
EV565687       --> TTACGGATCCTGAGCAAATCAAGGAAGTGTTCAACAAAGTTTATGATTT-
EV565666       --> TTACGGATCCTGAGCAAATCAAGGAAGTGTTCAACAAAGTTTATGATTT-
EV565667       --> TTACGGATCCTGAGCAAATCAAGGAAGTGTTCAACAAAGTTTATGATTT-
EV565686       --> ....GGATCCTGAGCAAATCAAGGAAGTGTTCAACAAAGTTTATGATTTT
FD949889       --> ..................................................
EY924122       --> ..................................................
EY925208       --> ..................................................
FD988359       --> ..................................................
EV536093       --> ..................................................

               401    -    451
UN14642        --> CCCAAAACCACATACATT-CCCTTT-GAGCAACCTTATAGTCAGTGGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443400       <-- ..................................................
FD945474       <-- ..................................................
EY893358       <-- ..................................................
FD984263       <-- ..................................................
EV540617       <-- ..................................................
EV570965       <-- ..................................................
EV570966       <-- ..................................................
EY919830       <-- ..................................................
EY920732       <-- ..................................................
EY896924       --> CCCAAAACCACATACATT-CCCTTT-GAGCAACCTTATAGTCAGTGGACT
EV565687       --> CCCAAAACCACATACATT-CCCTTT-GAGCAACCTTATAGTCAGTGGACT
EV565666       --> CCCAAAACCACATACATT-CCCTTT-GAGCAACCTTATAGTCAGTGGACT
EV565667       --> CCCAAAACCACATACATT-CCCTTT-GAGCAACCTTATAGTCAGTGGACT
EV565686       --> CCCAAAACCACATACATTTCCCTTTTGAGCAACCTTATAGTCAGTGGACT
FD949889       --> ..................................................
EY924122       --> ..................................................
EY925208       --> ..................................................
FD988359       --> ..................................................
EV536093       --> ..................................................

               451    -    501
UN14642        --> GTTTAGTT-ATGATGGTGATAAATGG-TCAAAACACAGAAGAATCATCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443400       <-- ..................................................
FD945474       <-- ..................................................
EY893358       <-- ..................................................
FD984263       <-- ..................................................
EV540617       <-- ..................................................
EV570965       <-- ..................................................
EV570966       <-- ..................................................
EY919830       <-- ..................................................
EY920732       <-- ..................................................
EY896924       --> GTTTAGTT-ATGATGGTGATAAATGG-TCAAAACACAGAAGAATCATCAA
EV565687       --> GTTTAGTT-ATGATGGTGATAAATGG-TCAAAACACAGAAGAATCATCAA
EV565666       --> GTTTAGTT-ATGATGGTGATAAATGG-TCAAAACACAGAAGAATCATCAA
EV565667       --> GTTTAGTT-ATGATGGTGATAAATGG-TCAAAACACAGAAGAATCATCAA
EV565686       --> GTTTAGTTTATGATGGTGATAAATGGGTCAAAACACAGAAGAATCATCAA
FD949889       --> ..................................................
EY924122       --> ..................................................
EY925208       --> ..................................................
FD988359       --> ..................................................
EV536093       --> ..................................................

               501    -    551
UN14642        --> CCC-TGCTTTCCACCTTCAGAAGATTAAGAATATGGTACCTGTGTTCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443400       <-- ..................................................
FD945474       <-- ..................................................
EY893358       <-- ..................................................
FD984263       <-- ..................................................
EV540617       <-- ..................................................
EV570965       <-- ..................................................
EV570966       <-- ..................................................
EY919830       <-- ..................................................
EY920732       <-- ..................................................
EY896924       --> CCC-TGCTTTCCACCTTCAGAAGATTAAGAATATGGTACCTGTGTTCCAT
EV565687       --> CCC-TGCTTTCCACCTTCAGAAGATTAAGAATATGGTACCTGTGTTCCAT
EV565666       --> CCC-TGCTTTCCACCTTCAGAAGATTAAGAATATGGTACCTGTGTTCCAT
EV565667       --> CCC-TGCTTTCCACCTTCAGAAGATTAAGAATATGGTACCTGTGTTCCAT
EV565686       --> CCCCTGCTTTCCACCTTCAGAAGATTAAGAATATGGTACCTGTGTTCCAT
FD949889       --> ..................................................
EY924122       --> ..................................................
EY925208       --> ..................................................
FD988359       --> ..................................................
EV536093       --> ..................................................

               551    -    601
UN14642        --> CAGAGCTGCAATGAGGTTATTGACAAATGGGACAGGATAGTCTCGGACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443400       <-- ..................................................
FD945474       <-- ..................................................
EY893358       <-- ..................................................
FD984263       <-- ..................................................
EV540617       <-- ..................................................
EV570965       <-- ..................................................
EV570966       <-- ..................................................
EY919830       <-- ..................................................
EY920732       <-- ..................................................
EY896924       --> CAGAGCTGCAATGAGGTTATTGACAAATGGGACAGGATAGTCTCGGACAA
EV565687       --> CAGAGCTGCAATGAGGTTATTGACAAATGGGACAGGATAGTCTCGGACAA
EV565666       --> CAGAGCTGCAACGAGGTTATTGACAAATGGGACAGGATAGTCTCGGACAA
EV565667       --> CAGAGCTGCAACGAGGTTATTGACAAATGGGACAGGATAGTCTCGGACAA
EV565686       --> CAGAGCTGCAATGAGGTTATTGACAAATGGGACAGGATAGTCTCGGACAA
FD949889       --> ..................................................
EY924122       --> ..................................................
EY925208       --> ..................................................
FD988359       --> ..................................................
EV536093       --> ..................................................

               601    -    651
UN14642        --> AGGGTCATCCTGTGAGGTGG-ACGTTTGGCCTGGACTTATGAGTATAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443400       <-- ..................................................
FD945474       <-- ..................................................
EY893358       <-- ..................................................
FD984263       <-- ..................................................
EV540617       <-- ..................................................
EV570965       <-- ..................................................
EV570966       <-- ..................................................
EY919830       <-- ..................................................
EY920732       <-- ..................................................
EY896924       --> AGGGTCATCCTGTGAGGTGG-ACGTTTGTCCTGGACTTATGAGTATAACA
EV565687       --> AGGGTCATCCTGTGAGGTGG-ACGTTTGGCCTGGACTTATGAGTATAACA
EV565666       --> AGGGTCATCTTGTGAGGTGG-ACGTTTGGCCTGGACTTATGAGTATAACA
EV565667       --> AGGGTCATCTTGTGAGGTGG-ACGTTTGGCCTGGACTTATGAGTATAACA
EV565686       --> AGGGTCATCCTGTGAGGTGGGACGTTTGGCCTG-ACTTATGAGTATAACA
FD949889       --> ..................................................
EY924122       --> ..................................................
EY925208       --> ..................................................
FD988359       --> ..................................................
EV536093       --> ..................................................

               651    -    701
UN14642        --> GAAGATGTGATCTCTCGTACTGCTTTTGGCAGCAGCTATAAAGATGGACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443400       <-- ..................................................
FD945474       <-- ..................................................
EY893358       <-- ..................................................
FD984263       <-- ..................................................
EV540617       <-- ..................................................
EV570965       <-- ..................................................
EV570966       <-- ..................................................
EY919830       <-- ..................................................
EY920732       <-- ..................................................
EY896924       --> GAAGATGTGATCTCTCGTACTGCTTTTGGCAGCAGCTACAAAGATGGACA
EV565687       --> GAAGATGTGATCTCTCGTACTGCTTTTGGCAGCAGCTATAAAGATGGACA
EV565666       --> GAAGACGTGATCTCTCGTACTGCTTTTGGCAGCAGCTATAAAGATGGACA
EV565667       --> GAAGACGTGATCTCTCGTACTGCTTTTGGCAGCAGCTATAAAGATGGACA
EV565686       --> GAAGATGTGATCTCTCGTACTGCTTT........................
FD949889       --> ..................................................
EY924122       --> ..................................................
EY925208       --> ..................................................
FD988359       --> ..................................................
EV536093       --> ..................................................

               701    -    751
UN14642        --> GAGGATATTTGAGCTCCAAACAGAACTAGCACAGCTCATCATCCAAGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443400       <-- ..................................................
FD945474       <-- ..................................................
EY893358       <-- ..................................................
FD984263       <-- ..................................................
EV540617       <-- ..................................................
EV570965       <-- ..................................................
EV570966       <-- ..................................................
EY919830       <-- ..................................................
EY920732       <-- ..................................................
EY896924       --> GAGGATATTTGAGCTCCAAACAGAACTAGCACAGCTCATCATCCAAGC..
EV565687       --> GAGGATATTTGAGCTCCAAACAGAACTAGCACAGCTCATCATCCAAGCTT
EV565666       --> GAGGATATTTGAGCTCCAAACAGAACTAGCACAGCTCATCATCCAAGCTT
EV565667       --> GAGGATATTTGAGCTCCAAACAGAACTAGCACAGCTCATCATCCAAGCTT
EV565686       --> ..................................................
FD949889       --> ..................................................
EY924122       --> ..................................................
EY925208       --> ..................................................
FD988359       --> ..................................................
EV536093       --> ..................................................

               751    -    801
UN14642        --> TTAGTAAATCTTACATCCCTGGATATAGATATCTCCCAACAAAGGACAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443400       <-- ..................................................
FD945474       <-- ..................................................
EY893358       <-- ..................................................
FD984263       <-- ..................................................
EV540617       <-- ..................................................
EV570965       <-- ..................................................
EV570966       <-- ..................................................
EY919830       <-- ..................................................
EY920732       <-- ..................................................
EY896924       --> ..................................................
EV565687       --> TTAGTAAATCTTACATCCCTGGATATAGATATCTCCCAACAAAGacatag
EV565666       --> TTAGTAAATCTTACATCCCTGGATATAGATATCTCCCAACAA--GACAAT
EV565667       --> TTAGTAAATCTTACATCCCTGGATATAGATATCTCCCAACAAAGGACAAT
EV565686       --> ..................................................
FD949889       --> .............................gATCTCCCAACAAAGGACAAT
EY924122       --> ..................................................
EY925208       --> ..................................................
FD988359       --> ..................................................
EV536093       --> ..................................................

               801    -    851
UN14642        --> AGAAG-ATTAAAGCAGCAGCCAAAGAAACTCATGATATACTGAAAGGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443400       <-- ..........AAGCAGCAGCCAAAGAAACTCATGATATACTGAAAGGGCT
FD945474       <-- .........................gAACTCATGATATACTGAAAGGGCT
EY893358       <-- ..................................................
FD984263       <-- ..................................................
EV540617       <-- ..................................................
EV570965       <-- ..................................................
EV570966       <-- ..................................................
EY919830       <-- ..................................................
EY920732       <-- ..................................................
EY896924       --> ..................................................
EV565687       --> a.................................................
EV565666       --> AGAGG-ATTAAAGCAGCAGCCAAAGAAACGCATGATATACTGAAA.....
EV565667       --> AGAAG-ATTAAAGCAGCAGCCAAAGAAACGCATGATATACTGAAAGGGCT
EV565686       --> ..................................................
FD949889       --> AGAAGGATTAAAGCAGCAGCCAAAGAAACTCATGATATACTGAAAGGGCT
EY924122       --> .............................................GGGCT
EY925208       --> .............................................GGGCT
FD988359       --> ..................................................
EV536093       --> ..................................................

               851    -    901
UN14642        --> CGTTAACAAAAGGTTACGGGCAAGAGAGGCTGGGGAAGCATCAAATGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443400       <-- CGTTAACAAAAGGTTACGGGCAAGAGAGGCTGGGGAAGCACCAAATGAAG  Raphanus sativus cv GSK3-1
FD945474       <-- CGTTAACAAAAGGTTACGGGCAAGAGAGGCTGGGGAAGCACCAAATGAAG  Raphanus sativus cv Early Scarlet Globe
EY893358       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD984263       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV540617       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV570965       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV570966       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY919830       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY920732       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY896924       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV565687       --> ..................................................  Raphanus raphanistrum subsp. landra
EV565666       --> ..................................................  Raphanus raphanistrum subsp. landra
EV565667       --> CGT...............................................  Raphanus raphanistrum subsp. landra
EV565686       --> ..................................................  Raphanus raphanistrum subsp. landra
FD949889       --> CGTTAACAAAAGGTTACGGGCAAGAGAGGCTGGGGAAGCACCAAATGAAG  Raphanus sativus cv Early Scarlet Globe
EY924122       --> CGTTAACAAAAGGTTACGGGCAAGAGAGGCTGGGGAAGCATCAAATGAAG  Raphanus raphanistrum subsp. landra
EY925208       --> CGTTAACAAAAGGTTACGGGCAAGAGAGGCTGGGGAAGCATCAAATGAAG  Raphanus raphanistrum subsp. landra
FD988359       --> ...............................GGGGAAGCATCAAATGAAG  Raphanus raphanistrum subsp. landra
EV536093       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               901    -    951
UN14642        --> ATTTGTTAGGTATACTTCTTGAATCGAATTTAGGGCAAGCTAAAGGAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443400       <-- ATTTGTTAGGTATACTTCTTGAATCGAATTTAGGGCAAGCTAAAGGAAAT
FD945474       <-- ATTTGTTAGGTATACTTCTTGAATCGAATCTAGGGCAAGCTAAAGGAAAT
EY893358       <-- ..................................................
FD984263       <-- ..................................................
EV540617       <-- ..................................................
EV570965       <-- ..................................................
EV570966       <-- ..................................................
EY919830       <-- ..................................................
EY920732       <-- ..................................................
EY896924       --> ..................................................
EV565687       --> ..................................................
EV565666       --> ..................................................
EV565667       --> ..................................................
EV565686       --> ..................................................
FD949889       --> ATTTGTTAGGTATACTTCTTGAATCGAATCTAGGGCAAGCTAAAGGAAAT
EY924122       --> ATTTGTTAGGTATACTTCTTGAATCGAATTTAGGGCAAGCTAAAGGAAAT
EY925208       --> ATTTGTTAGGTATACTTCTTGAATCGAATTTAGGGCAAGCTAAAGGAAAT
FD988359       --> ATTTGTTAGGTATACTTCTTGAATCGAATTTAGGGCAAGCTAAAGGAAAT
EV536093       --> ..................................................

               951    -   1001
UN14642        --> GGAATGAGCGTTGACGATGTGATAGAGGAGTGCAAGCTGTTCTACTTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443400       <-- GGAATGAGCGTTGACGATGTGATAGAGGAGTGCAAGCTGTTCTACTTTGC  Raphanus sativus cv GSK3-1
FD945474       <-- GGAATGAGCGTTGACGATGTGATAGAGGAGTGCAAGCTGTTCTACTTTGC  Raphanus sativus cv Early Scarlet Globe
EY893358       <-- ..........TTGACGATGTGATAGAGGAGTGCAAGCTGTTCTACTTTGC  Raphanus raphanistrum subsp. maritimus
FD984263       <-- ................ATGTGATAGAGGAGTGCAAGCTGTTCTACTTTGC  Raphanus raphanistrum subsp. landra
EV540617       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV570965       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV570966       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY919830       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY920732       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY896924       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV565687       --> ..................................................  Raphanus raphanistrum subsp. landra
EV565666       --> ..................................................  Raphanus raphanistrum subsp. landra
EV565667       --> ..................................................  Raphanus raphanistrum subsp. landra
EV565686       --> ..................................................  Raphanus raphanistrum subsp. landra
FD949889       --> GGAATGAGCGTTGACGATGTGATAGAGGAGTGCAAGCTGTTCTACTTTGC  Raphanus sativus cv Early Scarlet Globe
EY924122       --> GGAATGAGCGTTGACGATGTGATAGAGGAGTGCAAGCCGTTCTACTTTGC  Raphanus raphanistrum subsp. landra
EY925208       --> GGAATGAGCGTTGACGATGTGATAGAGGAGTGCAAGCCGTTCTACTTTGC  Raphanus raphanistrum subsp. landra
FD988359       --> GGAATGAGCGTTGACGATGTGATAGAGGAGTGCAAGCTGTTCTACTTTGC  Raphanus raphanistrum subsp. landra
EV536093       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               1001   -   1051
UN14642        --> GGGGCAAGAGACAACTTCAGTACTTCTAGTTTGGACAATGATTCTGCTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443400       <-- CGGGCAAGAGACAACTTCAGTACTGCTAGTTTGGACAATGATTCTGCTAA  Raphanus sativus cv GSK3-1
FD945474       <-- CGGGCAAGAGACAACTTCAGTACTGCTAGTTTGGACAATGATTCTGCTAA  Raphanus sativus cv Early Scarlet Globe
EY893358       <-- GGGGCAAGAGACAACTTCAGTACTTCTAGTTTGGACAATGATTCTGCTAA  Raphanus raphanistrum subsp. maritimus
FD984263       <-- GGGGCAAGAGACAACTTCAGTACTTCTAGTTTGGACAATGATTCTGCTAA  Raphanus raphanistrum subsp. landra
EV540617       <-- ..........................gAGTTTGGACAATGATTCTGCTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV570965       <-- ................................................AA  Raphanus raphanistrum subsp. landra
EV570966       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY919830       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY920732       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY896924       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV565687       --> ..................................................  Raphanus raphanistrum subsp. landra
EV565666       --> ..................................................  Raphanus raphanistrum subsp. landra
EV565667       --> ..................................................  Raphanus raphanistrum subsp. landra
EV565686       --> ..................................................  Raphanus raphanistrum subsp. landra
FD949889       --> CGGGCAAGAGACAACTTCAGTACTGCTAGTTTGGACAATGATTCTGCTAA  Raphanus sativus cv Early Scarlet Globe
EY924122       --> GGGGCAAGAGACAACTTCAGTACTTCTAGTTTGGACAATGATTCTGCTAA  Raphanus raphanistrum subsp. landra
EY925208       --> GGGGCAAGAGACAACTTCAGTACTTCTAGTTTGGACAATGATTCTGCTAA  Raphanus raphanistrum subsp. landra
FD988359       --> GGGGCAAGAGACAACTTCAGTACTTCTAGTTTGGACAATGATTCTGCTAA  Raphanus raphanistrum subsp. landra
EV536093       --> ..........................gAGTTTGGACAATGATTCTGCTAA  Raphanus raphanistrum subsp. raphanistrum (MS)

               1051   -   1101
UN14642        --> GCCAACACCAAGATTGGCAGGCTCGTGCACGAGAAGAAGTTAAGCAAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443400       <-- GCCAACACCAAGACTGGCAGGTTCGTGCACGAGAAGAAGTGAAGCAAGTG  Raphanus sativus cv GSK3-1
FD945474       <-- GCCAACACCAAGACTGGCAGGTTCGTGCACGAGAAGAAGTGAAGCAAGTG  Raphanus sativus cv Early Scarlet Globe
EY893358       <-- GCCAACACCAAGATTGGCAGGCTCGTGCACGAGAAGAAGTTAAGCAAGTA  Raphanus raphanistrum subsp. maritimus
FD984263       <-- GCCAACACCAAGATTGGCATGCTCGTGCACGAGAAGAAGTTAAGCAAGTA  Raphanus raphanistrum subsp. landra
EV540617       <-- GCCAACACCAAGACTGGCAGGTTCGTGCACGAGAAGAAGTGAAGCAAGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV570965       <-- GCCAACACCAAGATTGGCAGGCTCGTGCACGAGAAGAAGTTAAGCAAGTA  Raphanus raphanistrum subsp. landra
EV570966       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY919830       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY920732       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY896924       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV565687       --> ..................................................  Raphanus raphanistrum subsp. landra
EV565666       --> ..................................................  Raphanus raphanistrum subsp. landra
EV565667       --> ..................................................  Raphanus raphanistrum subsp. landra
EV565686       --> ..................................................  Raphanus raphanistrum subsp. landra
FD949889       --> GCCAACACCAAGACTGGCAGGTTCGTGCACGAGAAGAAGTGAAGCAAGTG  Raphanus sativus cv Early Scarlet Globe
EY924122       --> GCCAACACCAAGATTGGCAGGCTCGTGCACGAGAAGAAGTTAAGCAAGTA  Raphanus raphanistrum subsp. landra
EY925208       --> GCCAACACCAAGATTGGCAGGCTCGTGCACGAGAAGAAGTTAAGCAAGTA  Raphanus raphanistrum subsp. landra
FD988359       --> GCCAACACCAAGATTGGCATGCTCGTGCACGAGAAGAAGTTAAGCAAGTA  Raphanus raphanistrum subsp. landra
EV536093       --> GCCAACACCAAGACTGGCAGGTTCGTGCACGAGAAGAAGTGAAGCAAGTG  Raphanus raphanistrum subsp. raphanistrum (MS)

               1101   -   1151
UN14642        --> TTTGGTGATAAAGAACCTGATACAGAAGGGCTTAACCATCTCAAAACTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443400       <-- TTTGGTGATAAAGAACCTGATACAGAAGGGCTTAACCATCTCAAAACTAT  Raphanus sativus cv GSK3-1
FD945474       <-- TTTGGTGATAAAGAACCTGATACAGAAGGCCTTAACCATCTCAAAACTAT  Raphanus sativus cv Early Scarlet Globe
EY893358       <-- TTTGGTGATAAAGAACCTGATACAGAAGGGCTTAACCATCTCAAAACTAT  Raphanus raphanistrum subsp. maritimus
FD984263       <-- TTTGGTGATAAAGAACCTGATACAGAAGGGCTTAACCATCTCAAAACTAT  Raphanus raphanistrum subsp. landra
EV540617       <-- TTTGGTGATAAAGAACCTGATACAGAAGGCCTTAACCATCTCAAAACTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV570965       <-- TTTGGTGATAAAGAACCTGATACAGAAGGGCTTAACCATCTCAAAACTAT  Raphanus raphanistrum subsp. landra
EV570966       <-- ..................GATACAGAAGGGCTTAACCATCTCAAAACTAT  Raphanus raphanistrum subsp. landra
EY919830       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY920732       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY896924       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV565687       --> ..................................................  Raphanus raphanistrum subsp. landra
EV565666       --> ..................................................  Raphanus raphanistrum subsp. landra
EV565667       --> ..................................................  Raphanus raphanistrum subsp. landra
EV565686       --> ..................................................  Raphanus raphanistrum subsp. landra
FD949889       --> TTTGGTGATAAAGAACCTGATACAGAAGGCCTTAACCATCTCAAAACTAT  Raphanus sativus cv Early Scarlet Globe
EY924122       --> TTTGGTGATAAAGAACCTGATACAGAAGGGCTTAACCATCTCAAAACTAT  Raphanus raphanistrum subsp. landra
EY925208       --> TTTGGTGATAAAGAACCTGATACAGAAGGGCTTAACCATCTCAAAACTAT  Raphanus raphanistrum subsp. landra
FD988359       --> TTTGGTGATAAAGAACCTGATACAGAAGGGCTTAACCATCTCAAAACTAT  Raphanus raphanistrum subsp. landra
EV536093       --> TTTGGTGATAAAGAACCTGATACAGAAGGCCTTAACCATCTCAAAACTAT  Raphanus raphanistrum subsp. raphanistrum (MS)

               1151   -   1201
UN14642        --> GACAATGATAATTAATGAAGTCCTTAGGTTATATCCTCCAGTAACTCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443400       <-- GACAATGATAATTAATGAAGTCCTTAGGTTATATCCTCCAGTAACTCAGC
FD945474       <-- GACAATGATAATTAATGAAGTCCTTAGGTTATATCCTCCAGTAACTCAGC
EY893358       <-- GACAATGATAATTAATGAAGTCCTTAGGTTATATCCTCCAGTAACTCAGC
FD984263       <-- GACAATGATAATTAATGAAGTCCTTAGGTTATATCCTCCAGTAACTCAGC
EV540617       <-- GACAATGATAATTAATGAAGTCCTTAGGTTATATCCTCCAGTAACTCAGC
EV570965       <-- GACAATGATAATTAATGAAGTCCTTAGGTTATATCCTCCAGTAACTCAGC
EV570966       <-- GACAATGATAATTAATGAAGTCCTTAGGTTATATCCTCCAGTAACTCAGC
EY919830       <-- ..................................................
EY920732       <-- ..................................................
EY896924       --> ..................................................
EV565687       --> ..................................................
EV565666       --> ..................................................
EV565667       --> ..................................................
EV565686       --> ..................................................
FD949889       --> GACAATGATAATTAATGAAGTCCTTAGGTTATATCCTCCAGTAACTCAGC
EY924122       --> GACAATGATAATTAATGAAGTCCTTAGGTTATATCCTCCAGTAACTCAGC
EY925208       --> GACAATGATAATTAATGAAGTCCTTAGGTTATATCCTCCAGTAACTCAGC
FD988359       --> GACAATGATAATTAATGAAGTCCTTAGGTTATATCCTCCAGTAACTCAGC
EV536093       --> GACAATGATAATTAATGAAGTCCTTAGGTTATATCCTCCAGTAACTCAGC

               1201   -   1251
UN14642        --> TGAGTCGAACCATTCACAAAGAGATGAAGCTAGGCGACCTGACGCTACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443400       <-- TGAGTCGAACCATTCACAAAGAAATGAAGCTAGGCGACCTGACGCTACCA  Raphanus sativus cv GSK3-1
FD945474       <-- TGAGTCGAACCATTCACAAAGAAATGAAGCTAGGCGACCTGACGCTACCA  Raphanus sativus cv Early Scarlet Globe
EY893358       <-- TGAGTCGAACCATTCACAAAGAGATGAAGCTAGGCGACCTGACGCTACCA  Raphanus raphanistrum subsp. maritimus
FD984263       <-- TGAGTCGAACCATTCACAAAGAGATGAAGCTAGGCGACCTGACGCTACCA  Raphanus raphanistrum subsp. landra
EV540617       <-- TGAGTCGAACCATTCACAAAGAAATGAAGCTAGGCGACCTGACGCTACCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV570965       <-- TGAGTCGAACCATTCACAAAGAGATGAAGCTAGGCGACCTGACGCTACCA  Raphanus raphanistrum subsp. landra
EV570966       <-- TGAGTCGAACCATTCACAAAGAGATGAAGCTAGGCGACCTGACGCTACCA  Raphanus raphanistrum subsp. landra
EY919830       <-- ......................................CTGACGCTACCA  Raphanus raphanistrum subsp. landra
EY920732       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY896924       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV565687       --> ..................................................  Raphanus raphanistrum subsp. landra
EV565666       --> ..................................................  Raphanus raphanistrum subsp. landra
EV565667       --> ..................................................  Raphanus raphanistrum subsp. landra
EV565686       --> ..................................................  Raphanus raphanistrum subsp. landra
FD949889       --> TGAGTCGAACCATTCACAAAGAAATGAAGCTAGGCGACCTGACGCTACCA  Raphanus sativus cv Early Scarlet Globe
EY924122       --> TGAGTCGAACCATTCACAAAGAGATGAAGCTAGGCGACCTGACGCTACCA  Raphanus raphanistrum subsp. landra
EY925208       --> TGAGTCGAACCATTCACAAAGAGATGAAGCTAGGCGACCTGACGCTACCA  Raphanus raphanistrum subsp. landra
FD988359       --> TGAGTCGAACCATTCACAAAGAGATGAAGCTAGGCGACCTGACGCTACCA  Raphanus raphanistrum subsp. landra
EV536093       --> TGAGTCGAACCATTCACAAAGAAATGAAGCTAGGCGACCTGACGCTACCA  Raphanus raphanistrum subsp. raphanistrum (MS)

               1251   -   1301
UN14642        --> GGTGGCGTTCACATCAGTCTGCCTATTATGCTAGTCCAACGCGATACCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443400       <-- GGTGGCGTTCACATCAGTCTGCCTATTATGCTAGTCCAACATGATACCCA  Raphanus sativus cv GSK3-1
FD945474       <-- GGTGGCGTTCACATCAGTCTGCCTATTATGCTAGTCCAACACGATACCCA  Raphanus sativus cv Early Scarlet Globe
EY893358       <-- GGTGGCGTTCACATCAGTCTGCCTATTATGCTAGTCCAACACGATACCCA  Raphanus raphanistrum subsp. maritimus
FD984263       <-- GGTGGCGTTCACATCAGTCTGCCTATTATTCTAGTCCAACGCGATACCCA  Raphanus raphanistrum subsp. landra
EV540617       <-- GGTGGCGTTCACATCAGTCTGCCTATTATGCTAGTCCAACACGATACCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV570965       <-- GGTGGCGTTCACATCAGTCTGCCTATTATGCTAGTCCAACGCGATACCCA  Raphanus raphanistrum subsp. landra
EV570966       <-- GGTGGCGTTCACATCAGTCTGCCTATTATGCTAGTCCAACGCGATACCCA  Raphanus raphanistrum subsp. landra
EY919830       <-- GGTGGCGTTCACATCAGTCTGCCTATTATGCTAGTCCAACGCGATACCCA  Raphanus raphanistrum subsp. landra
EY920732       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY896924       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV565687       --> ..................................................  Raphanus raphanistrum subsp. landra
EV565666       --> ..................................................  Raphanus raphanistrum subsp. landra
EV565667       --> ..................................................  Raphanus raphanistrum subsp. landra
EV565686       --> ..................................................  Raphanus raphanistrum subsp. landra
FD949889       --> GGTGGCGTTCACATCAGTCTGCCTATTATGCTAGTCCAACACGATACCCA  Raphanus sativus cv Early Scarlet Globe
EY924122       --> GGTGGCGTTCACATCAGTCTGCCTATTATGCTAGTCCAACGCGATACCCA  Raphanus raphanistrum subsp. landra
EY925208       --> GGTGGCGTTCACATCAGTCTGCCTATTATGCTAGTCCAACGCGATACCCA  Raphanus raphanistrum subsp. landra
FD988359       --> GGTGGCGTTCACATCAGTCTGCCTATTATTCTAGTCCAACGCGATACCCA  Raphanus raphanistrum subsp. landra
EV536093       --> GGTGGCGTTCACATCAGTCTGCCTATTATGCTAGTCCAACACGATACCCA  Raphanus raphanistrum subsp. raphanistrum (MS)

               1301   -   1351
UN14642        --> GCTATGGGGTAACAATGCAGCAGAGTTCAATCCTGAGAGATTCAAAGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443400       <-- GCTATGGGGTAACGATGCAGCAGAGTTCAAGCCGGAGAGATTCGAAGATG  Raphanus sativus cv GSK3-1
FD945474       <-- GCTATGGGGTAACGATGCAGCAGAGTTCAAGCCGGAGAGATTCGAAGATG  Raphanus sativus cv Early Scarlet Globe
EY893358       <-- GCTATGGGGTAACGATGCAGCAGAGTTCAAGCCGGAGAGATTCGAAGATG  Raphanus raphanistrum subsp. maritimus
FD984263       <-- GCTATGGGGTAACAATGCAGCAGAGTTCAATCCTGAGAGATTCAAAGATG  Raphanus raphanistrum subsp. landra
EV540617       <-- GCTATGGGGTAACGATGCAGCAGAGTTCAAGCCGGAGAGATTCGAAGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV570965       <-- GCTATGGGGTAACAATGCAGCAGAGTTCAATCCTGAGAGATTCAAAGATG  Raphanus raphanistrum subsp. landra
EV570966       <-- GCTATGGGGTAACAATGCAGCAGAGTTCAATCCTGAGAGATTCAAAGATG  Raphanus raphanistrum subsp. landra
EY919830       <-- GCTATGGGGTAACAATGCAGCAGAGTTCAATCCTGAGAGATTCAAAGATG  Raphanus raphanistrum subsp. landra
EY920732       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY896924       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV565687       --> ..................................................  Raphanus raphanistrum subsp. landra
EV565666       --> ..................................................  Raphanus raphanistrum subsp. landra
EV565667       --> ..................................................  Raphanus raphanistrum subsp. landra
EV565686       --> ..................................................  Raphanus raphanistrum subsp. landra
FD949889       --> GCTATGGGGTAACGATGCAGCAGAGTTCAAGCCGGAGAGATTCGAAGATG  Raphanus sativus cv Early Scarlet Globe
EY924122       --> GCTATGGGGTAACAATGCAGCAGAGTTCAATCCTGAGAGATTCAAAGATG  Raphanus raphanistrum subsp. landra
EY925208       --> GCTATGGGGTAACAATGCAGCAGAGTTCAATCCTGAGAGATTCAAAGATG  Raphanus raphanistrum subsp. landra
FD988359       --> GCTATGGGGTAACAATGCAGCAGAGTTCAATCCTGAGAGATTCAAAGATG  Raphanus raphanistrum subsp. landra
EV536093       --> GCTATGGGGTAACGATGCAGCAGAGTTCAAGCCGGAGAGATTCGAAGATG  Raphanus raphanistrum subsp. raphanistrum (MS)

               1351   -   1401
UN14642        --> GTGTCTCAAAGGCAACAAAGAGCCAAGTCTCCTTCTTTCCCTTTGCTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443400       <-- GTGTCTCAAAGGCAACAAAGAGCCAAGTCTCCTTCTTTCCCTTTGCTTGG
FD945474       <-- GTGTCTCAAAGGCAACAAAGAGCCAAGTCTCCTTCTTTCCCTTTGCTTGG
EY893358       <-- GTGTCTCAAAGGCAACAAAGAGCCAAGTCTCCTTCTTTCCCTTTGCTTGG
FD984263       <-- GTGTCTCAAAGGCAACAAAGAGCCAAGTCTCCTTCTTTCCCTTTGCTTGG
EV540617       <-- GTGTCTCAAAGGCAACAAAGAGCCAAGTCTCCTTCTTTCCCTTTGCTTGG
EV570965       <-- GTGTCTCAAAGGCAACAAAGAGCCAAGTCTCCTTCTTTCCCTTTGCTTGG
EV570966       <-- GTGTCTCAAAGGCAACAAAGAGCCAAGTCTCCTTCTTTCCCTTTGCTTGG
EY919830       <-- GTGTCTCAAAGGCAACAAAGAGCCAAGTCTCCTTCTTTCCCTTTGCTTGG
EY920732       <-- ................................tttTTTCCCTTTGCTTGG
EY896924       --> ..................................................
EV565687       --> ..................................................
EV565666       --> ..................................................
EV565667       --> ..................................................
EV565686       --> ..................................................
FD949889       --> GTGTCTCAAAG-CAACAAAGAGCCAAGTCTCCTTCTTTCCCTTTGCTTGG
EY924122       --> GTGTCTCAAAGGCAACAAAGAGCCAAGTCTCCTTCTTTCCCTTTGCTTGG
EY925208       --> GTGTCTCAAAGGCAACAAAGAGCCAAGTCTCCTTCTTTCCCTTTGCTTGG
FD988359       --> GTGTCTCAAAGGCAACAAAGAGCCAAGTCTCCTTCTTTCCCTTTGCTTGG
EV536093       --> GTGTCTCAAAGGCAACAAAGAGCCAAGTCTCCTTCTTTCCCTTTGCTTGG

               1401   -   1451
UN14642        --> GGACCAAGGATCTGCATTGGCCAAAATTTTGCCTTATTAGAGGCAAAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443400       <-- GGACCAAGGATCTGTATTGGCCAAAATTTTGCCTTATTAGAGGCAAAGAT  Raphanus sativus cv GSK3-1
FD945474       <-- GGACCAAGGATCTGTATTGGCCAAAATTTTGCCTTATTAGAGGCAAAGAT  Raphanus sativus cv Early Scarlet Globe
EY893358       <-- GGACCAAGGATCTGTGTTGGCCAAAATTTTGCCTTATTAGAGGCAAAGAT  Raphanus raphanistrum subsp. maritimus
FD984263       <-- GGACCAAGGATCTGCATTGGCCAAAATTTTGCCTTATTAGAGGCAAAGAT  Raphanus raphanistrum subsp. landra
EV540617       <-- GGACCAAGGATCTGTATTGGCCAAAATTTTGCCTTATTAGAGGCAAAGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV570965       <-- GGACCAAGGGTCTGCATTGGCCAAAATTTTGCCTTATTAGAGGCAAAGAT  Raphanus raphanistrum subsp. landra
EV570966       <-- GGACCAAGGGTCTGCATTGGCCAAAATTTTGCCTTATTAGAGGCAAAGAT  Raphanus raphanistrum subsp. landra
EY919830       <-- GGACCAAGGATTTGCATTGGCCAAAATTTTGCCTTATTAGAGGCAAAGAT  Raphanus raphanistrum subsp. landra
EY920732       <-- GGACCAAGGATTTGCATTGGCCAAAATTTTGCCTTATTAGAGGCAAAGAT  Raphanus raphanistrum subsp. landra
EY896924       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV565687       --> ..................................................  Raphanus raphanistrum subsp. landra
EV565666       --> ..................................................  Raphanus raphanistrum subsp. landra
EV565667       --> ..................................................  Raphanus raphanistrum subsp. landra
EV565686       --> ..................................................  Raphanus raphanistrum subsp. landra
FD949889       --> GG................................................  Raphanus sativus cv Early Scarlet Globe
EY924122       --> GGACCAAGGATCTGCATTGGCCAAAATTTTGCCTTATTAGAGGCAAAGAT  Raphanus raphanistrum subsp. landra
EY925208       --> GGACCAAGGATCTGCATTGGCCAAAATTTTGCCTTATTAGAGGCAAAGAT  Raphanus raphanistrum subsp. landra
FD988359       --> GGACCAAGGATCTGCATTGGCCAAAATTTTGCCTTATTAGAGGCAAAGAT  Raphanus raphanistrum subsp. landra
EV536093       --> GGACCAAGGATCTGTATTGGCCAAAATTTTGCCTTATTAGAGGCAAAGAT  Raphanus raphanistrum subsp. raphanistrum (MS)

               1451   -   1501
UN14642        --> GGCAATGGCATTGATTTTACAGAGATTCTCCTTTGAGCTTTCTCCTTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443400       <-- GGCAATGGCATTGATTCTACAGAGATTCTCCTTTGAGCTTTCTCCTTCCT  Raphanus sativus cv GSK3-1
FD945474       <-- GGCAATGACATTGATTCTACAGAGATTCTCCTTTGAGCTTTCTCCTTCCT  Raphanus sativus cv Early Scarlet Globe
EY893358       <-- GGCAATGGCATTGATTCTACAGAGATTCTCCTTTGAGCTTTCTCCTTCCT  Raphanus raphanistrum subsp. maritimus
FD984263       <-- GGCAATGGCATTGATTTTACAGAGATTCTCCTTTGAGCTTTCTCCTTCCT  Raphanus raphanistrum subsp. landra
EV540617       <-- GGCAATGACATTGATTCTACAGAGATTCTCCTTTGAGCTTTCTCCTTCCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV570965       <-- GGCAATGGCATTGATTTTACAGAGATTCTCCTTTGAGCTTTCTCCTTCCT  Raphanus raphanistrum subsp. landra
EV570966       <-- GGCAATGGCATTGATTTTACAGAGATTCTCCTTTGAGCTTTCTCCTTCCT  Raphanus raphanistrum subsp. landra
EY919830       <-- GGCAATGGCATTGATTTTACAGAGATTCTCCTTTGAGCTTTCTCCTTCCT  Raphanus raphanistrum subsp. landra
EY920732       <-- GGCAATGGCATTGATTTTACAGAGATTTTCCTTTGAGCTTTTTCCTTCCT  Raphanus raphanistrum subsp. landra
EY896924       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV565687       --> ..................................................  Raphanus raphanistrum subsp. landra
EV565666       --> ..................................................  Raphanus raphanistrum subsp. landra
EV565667       --> ..................................................  Raphanus raphanistrum subsp. landra
EV565686       --> ..................................................  Raphanus raphanistrum subsp. landra
FD949889       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY924122       --> GGCAATGGCATTGATTTTACAGAGATTCTCCTTTGAGCTTTCTCCTTCCT  Raphanus raphanistrum subsp. landra
EY925208       --> GGCAATGGCATTGATTTTACAGAGATTCTCCTTTGAGCTTTCTCCTTCCT  Raphanus raphanistrum subsp. landra
FD988359       --> GGCAATGGCATTGATTTTACAGAGATTCTCCTTTGAGCTTTCTCCTTCCT  Raphanus raphanistrum subsp. landra
EV536093       --> GGCAATGACATTGATTCTACAGAGATTCTCCTTTGAGCTTTCTCCTTCCT  Raphanus raphanistrum subsp. raphanistrum (MS)

               1501   -   1551
UN14642        --> ATGTCCATGCTCCTTACACAGTCTTCACCCTTCACCCAGAGTATGGTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443400       <-- ATGTCCATGCTCCTTACACAGTCTTCACCCTTCACCCAGAGTATGGTGCT
FD945474       <-- ATGTCCATGCTCCTTACACAGTCTTCACCCTTCACCCAGAGTATGGTGCT
EY893358       <-- ATGTCCATGCTCCTTACACAGTCTTCACCCTTCACCCAGAGTATGGTGCT
FD984263       <-- ATGTCCATGCTCCTTACACAGTCTTCACCCTTCATCCAGAGTATGGTGCT
EV540617       <-- ATGTCCATGCTCCTTACACAGTCTTCACCCTTCACCCAGAGTATGGTGCT
EV570965       <-- ATGTCCATGCTCCTTACACAGTCT-CACCCTTCACCCAGAGTATGGTGCC
EV570966       <-- ATGTCCATGCTCCTTACACAGTCT-CACCCTTCACCCAGAGTATGGTGCC
EY919830       <-- ATGTCCATGCTCCTTACACAGTTTTCACCCTTCACCCAGAGTATGGTGCT
EY920732       <-- ATGTCCATGCTCCTTACACAGTTTTCACCCTTCACCCAGAGTATGGTGCT
EY896924       --> ..................................................
EV565687       --> ..................................................
EV565666       --> ..................................................
EV565667       --> ..................................................
EV565686       --> ..................................................
FD949889       --> ..................................................
EY924122       --> ATGTCCATGCTCCTTACACAGTCTTCACCCTT..................
EY925208       --> ATGTCCATGCTCCTTACACAGTCTTCACCCTTCACCCAGAGTATGGTGCT
FD988359       --> ATGTCCATGCTCCTTACACAGTCTTCACCCTTCATCCAGAGTATGGTGCT
EV536093       --> ATGTCCATGCTCCTTACACAGTCTTCACCCTTCACCCAGAGTATGGTGCT

               1551   -   1601
UN14642        --> CATCTCATCCTCCACAAGCTATAGTTCCATACCAGAGCAGTAAAAGTAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443400       <-- CATCTCATCCTCCACAAGCTATAGTTCCATACCAGAGCAGTAAAAGTAGA
FD945474       <-- CATCTCATCCTCCACAAGCTATAGTTCCATACCAGAGCAGTAAAAGTAG-
EY893358       <-- CATCTCATCCTCCACAAGCTATAGTTCCATACCAGAGCAGTAAAAGTAGA
FD984263       <-- CATCTCATCCTCCACAAGCTATAGTTCCATACCAGAGCAGTAAAAGTAGA
EV540617       <-- CATCTCATCCTCCACAAGCTATAGTTCCATACCAGAGCAGTAAAAGTAG-
EV570965       <-- CATCTCATCCTCCACAAGCTATAGTTCCATACCAGAGCAGTAAAAGTAGA
EV570966       <-- CATCTCATCCTCCACAAGCTATAGTTCCATACCAGAGCAGTAAAAGTAGA
EY919830       <-- CATTTCATCCTCCACAAGCTATAGTTCCATACCAGAGCAGTAAAAGTAGA
EY920732       <-- CATTTCATCCTCCACAAGCTATAGTTCCATACCAGAGCAGTAAAAGTAGA
EY896924       --> ..................................................
EV565687       --> ..................................................
EV565666       --> ..................................................
EV565667       --> ..................................................
EV565686       --> ..................................................
FD949889       --> ..................................................
EY924122       --> ..................................................
EY925208       --> CATCTCATCCTCCACAAGCTATAGTTCCATAC-AGAGC............
FD988359       --> CATCTCATCCTCCACAAGCTATAGTTCCATACCAGAGCAGTAAAAGTAGA
EV536093       --> CATCTCATCCTCCACAAGCTATAGTTCCATACCAGAGCAGTAAAAGTAGA

               1601   -   1651
UN14642        --> ACTCAAACTCAAAGGCTCTGCTCACCAGATCTTTCCTGGCTATTAAATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443400       <-- ACTCAAACTCAAAGGCTCTGCTCACCAGATCTTTCCTGGCTATTAAATAA
FD945474       <-- --AAAAACTCAAAGGCTCTGCTCACCAGATCTTTCCTGGCTATTAAATAA
EY893358       <-- ACTCAAACTCAAAGGCTCTGCTCACCAGATCTTTCCTGGCTATTAAATAA
FD984263       <-- ACTCAAACTCAAAGGCTCTGCTCACCAGATCTTTCCTGGCTATTAAATAA
EV540617       <-- --AAAAACTCAAAGGCTCTGCTCACCAGATCTTTCCTGGCTATTAAATAA
EV570965       <-- ACTCAAACTCAAAGGCTCTGCTCACCAGATCTTTCCTGGCTATTAAATAA
EV570966       <-- ACTCAAACTCAAAGGCTCTGCTCACCAGATCTTTCCTGGCTATTAAATAA
EY919830       <-- ACTCAAACTCAAAGGCTCTGCTCACCAGATCTTTCCTGGCTATTAAATAA
EY920732       <-- ACTCAAACTCAAAGGCTCTGCTCACCAGATCTTTCCTGGCTATTAAATAA
EY896924       --> ..................................................
EV565687       --> ..................................................
EV565666       --> ..................................................
EV565667       --> ..................................................
EV565686       --> ..................................................
FD949889       --> ..................................................
EY924122       --> ..................................................
EY925208       --> ..................................................
FD988359       --> ACTCAA-CTCAAAG-CTCTGCTCACCAGATCTTTCCTGGCTAT.......
EV536093       --> A---AAACTCAAAGGCTCTGCTCACCAGATCTTTCCTGGCTATTAAATAA

               1651   -   1701
UN14642        --> TGTTCAATTCCATTATAACTTTATGATAATATCAACCGTTTCATGCATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443400       <-- TGTTCAATTCCATTATAACTTTATGA........................
FD945474       <-- TGTTCAATTCCATTATAACTTTATGATAATATCAACCGTTTCATGt....
EY893358       <-- TGTTCAATTCCATTATAACTTTATGATAATATCtatatgagtacagtttc
FD984263       <-- TGTTCAATTCCATTATAACTTTATGATAATATCAACCGTTTCATGCATTC
EV540617       <-- TGTTCAATTCCATTATAACTTTATGATAATATCAACCGTTTCATGCATTC
EV570965       <-- TGTTCAATTCCATTATAACTTTATGATAATATCAACCGTTTCATGCATTC
EV570966       <-- TGTTCAATTCCATTATAACTTTATGATAATATCAACCGTTTCATGCATTC
EY919830       <-- TGTTCAATTCCATTATAACTTTATGATAATATCAACCGTTTCATGCATTC
EY920732       <-- TGTTCAATTCCATTATAACTTTATGATAATATCAACCGTTTCATGCATTC
EY896924       --> ..................................................
EV565687       --> ..................................................
EV565666       --> ..................................................
EV565667       --> ..................................................
EV565686       --> ..................................................
FD949889       --> ..................................................
EY924122       --> ..................................................
EY925208       --> ..................................................
FD988359       --> ..................................................
EV536093       --> TGTTCAATTCCATTATAACTTTATGATAATATCAACCGTTTCATGCATTC

               1701   -   1751
UN14642        --> AAAGTTTCTACATAAATATCTATATGAGTACAGTTTCTACATTATTTAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443400       <-- ..................................................
FD945474       <-- ..................................................
EY893358       <-- tacattaagg........................................
FD984263       <-- AAAGTTTCTACATAAATATCTATATGAGTACAGTTTCTACAct.......
EV540617       <-- AAAGTTTCTACATAAATATCTATATGAGTACAGTTTCTACATT.......
EV570965       <-- AAAGTTTCTACATAAATATCTATATGAGTACAGTTTCTACATTATTTAGT
EV570966       <-- AAAGTTTCTACATAAATATCTATATGAGTACAGTTTCTACATTATTTAGT
EY919830       <-- AAAGTTTCTACATAAATATCTATATGAGTACAGTTTCTACATTATTTAGT
EY920732       <-- AAAGTTTCTACATAAATATCTATATGAGTACAGTTTCTACATTATTTAGT
EY896924       --> ..................................................
EV565687       --> ..................................................
EV565666       --> ..................................................
EV565667       --> ..................................................
EV565686       --> ..................................................
FD949889       --> ..................................................
EY924122       --> ..................................................
EY925208       --> ..................................................
FD988359       --> ..................................................
EV536093       --> AAAGTTTCTACATAAATATCTATATGAGTACAGTTTCTACATT.......

               1751   -   1801
UN14642        --> AACCAGTTTTTCTTTACC
                   ~~~~~~~~~~~~~~~~~~
FY443400       <-- ..................
FD945474       <-- ..................
EY893358       <-- ..................
FD984263       <-- ..................
EV540617       <-- ..................
EV570965       <-- AACCAGTTTTTCTTTACC
EV570966       <-- AACCAGTTTTTCTTTACC
EY919830       <-- AACCAGTTTTTCTTTACC
EY920732       <-- AACCAGTTTTTTTTTACC
EY896924       --> ..................
EV565687       --> ..................
EV565666       --> ..................
EV565667       --> ..................
EV565686       --> ..................
FD949889       --> ..................
EY924122       --> ..................
EY925208       --> ..................
FD988359       --> ..................
EV536093       --> ..................