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Alignment for radish unigene UN14704

               1      -     51
UN14704        --> GGGAACTCATGTTTCTGTGTTCCCAATTGTAGAACAACAACACACATCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531389       <-- GGGAACTCATGTTTCTGTGTTCCCAATTGTAGAACAACAACACACATCTT
EV539725       <-- GGGAACTCATGTTTCTGTGTTCCCAATTGTAGAACAACAACACACATCTT
EX759533       <-- ......ggATGTTTCTGTGTTCCCAATTGTAGAACAACAACACACATCTT
FD538096       <-- ......ggATGTTTCTGTGTTCCCAATTGTAGAACAACAACACACATCTT
FD545827       <-- ......ggATGTTTCTGTGTTCCCAATTGTAGAACAACAACACACATCTT
EW720622       <-- .............TCTGTGT-CCCAAT-GTAGA-CAACAACACACATCTT
EW719580       <-- .....................CCCAATTGTAGAACAACAACACACATCTT
EV546253       <-- ..........................ggGTAGAACAACAACACACATCTT
FD565949       <-- ..................................................
FD985258       <-- ..................................................
EV546656       <-- ..................................................
EW729057       <-- ..................................................
EY927340       <-- ..................................................
FD537499       <-- ..................................................
EY896212       <-- ..................................................
FD961361       <-- ..................................................
FD961191       <-- ..................................................
EV534942       --> GGGAACTCATGTTTCTGTGTTCCCAATTGTAGAACAACAACACACATCTT
EW723900       --> GGGAACTCATGTTTCTGTGTTCCCAATTGTAGAACAACAACACACATCTT
FD561918       --> GGGAACTCATGTTTCTGTGTTCCCAATTGTAGAACAACAACACACATCTT
FD564332       --> GGGAACTCATGTTTCTGT--TCCCAATTGTAGAACAACAACACACATCTT
FD965454       --> GGGAACTCATGTTTCTGTGTTCCCAATTGTAGAACAACAACACACATCTT
FD965687       --> GGGAACTCATGTTTCTGTGTTCCCAATTGTAGAACAACAACACACATCTT
FD989485       --> .GGAACTCATGTTTCTGTGTTCCCAATTGTAGAACAACAACACACATCTT
EV551583       --> ......ggATGTTTCTGTGTTCCCAATTGTAGAACAACAACACACATCTT
FD541146       --> ......ggATGTTTCTGTGTTCCCAATTGTAGAACAACAACACACATCTT
FD541911       --> ......ggATGTTTCTGTGTTCCCAATTGTAGAACAACAACACACATCTT
FD549799       --> ......ggATGTTTCTGTGTTCCCAATTGTAGAACAACAACACACATCTT
EW717016       --> ............TTCTGTGTTCCCAATTGTAGAACAACAACACACATCTT
EW715934       --> ..............CTGTGTTCCCAATTGTAGAACAACAACACACATCTT
FD964396       --> ...............gggGTTCCCAATTGTAGAACAACAACACACATCTT
EW714194       --> ....................TCCCAATTGTAGAACAACAACACACATCTT
EV551085       --> ..........................ggGTAGAACAACAACACACATCTT
FD562766       --> ..................................................
EY931363       --> ..................................................
EV527054       --> ..................................................

               51     -    101
UN14704        --> GACATAAGAACTCTCTTGTTCTGTTTCTTATCCTGTTTCAAGAATTCGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531389       <-- GACATAAGAACTCTCTTGTTCTGTTTCTTATCCTGTTTCAAGAATTCGTT
EV539725       <-- GACATAAGAACTCTCTTGTTCTGTTTCTTATCCTGTTTCAAGAATTCGTT
EX759533       <-- GACATAAGAACTCTCTTGCTCTGTTTCTTATCCTGTTTCAAGAATTCGTT
FD538096       <-- GACATAAGAACTCTCTTGCTCTGTTTCTTACCCTGTTTCAAGAATTCGTT
FD545827       <-- GACATAAGAACTCTCTTGTTCTGTTTCTTATCCTGTTTCAAGAATTCGTT
EW720622       <-- GACATA-G-ACTCTCTTGTTCTGTTTCTTATCCTGTTTCAAGAATTCGTT
EW719580       <-- GACATAAGAACTCTCCTGTTCTGTTTCTTATCCTGTTTCAAGAATTCGTT
EV546253       <-- GACATAAGAACTCTCTTGTTCTGTTTCTTATCCTGTTTCAAGAATTCGTT
FD565949       <-- ................................................TT
FD985258       <-- ..................................................
EV546656       <-- ..................................................
EW729057       <-- ..................................................
EY927340       <-- ..................................................
FD537499       <-- ..................................................
EY896212       <-- ..................................................
FD961361       <-- ..................................................
FD961191       <-- ..................................................
EV534942       --> GACATAAGAACTCTCTTGTTCTGTTTCTTATCCTGTTTCAAGAATTCGTT
EW723900       --> GACATAAGAACTCTCTTGCTCTGTTTCTTATCCTGTTTCAAGAATTCGTT
FD561918       --> GACATAAGAACTCTCTTGTTCTGATTCTTATCCTGTTTCAAGAATTCGTT
FD564332       --> GACATAAGAACTCTCTTGTTCTGTTTCTTATCCTGTTTCAAGAATTCGTT
FD965454       --> GACATAAGAACTCTCTTGTTCCGTTTCTTATCCTGTTTCAAGAATTCGTT
FD965687       --> GACATAAGAACTCTCTTGTTCTGTTTCTTATCCTGTTTCAAGAATTCGTT
FD989485       --> GACATAAGAACTCTCTTGTTCTGTTTCATATCCTGTTTCAAGAATTCGTT
EV551583       --> GACATAAGAACTCTCTTGTTCTGTTTCTTATCCTGTTTCAAGAATTCGTT
FD541146       --> GACATAAGAACTCTCTTGCTCTGTTTCTTATCCTGTTTCAAGAATTCGTT
FD541911       --> GACATAAGAACTCTCTTGCTCTGTTTCTTACCCTGTTTCAAGAATTCGTT
FD549799       --> GACATAAGAACTCTCTTGTTCTGTTTCTTATCCTGTTTCAAGAATTCGTT
EW717016       --> GACATAAGAACTCTCTTGTTCTGTTTCTTATCCTGTTTCAAGAATTCGTT
EW715934       --> GACATAAGAACTCTCCTGTTCTGTTTCTTATCCTGTTTCAAGAATTCGTT
FD964396       --> GACATAAGAACTCTCTTGTTCTGTTTCTTATCCTGTTTCAAGAATTCGTT
EW714194       --> GACATAAGAACTCTCTTGTTCTGTTTCTTATCCTGTTTCAAGAATTCGTT
EV551085       --> GACATAAGAACTCTCTTGTTCTGTTTCTTATCCTGTTTCAAGAATTCGTT
FD562766       --> ..................................................
EY931363       --> ..................................................
EV527054       --> ..................................................

               101    -    151
UN14704        --> TTTCTT-GATTTCTGTTGGAAGATGAATCTGAATATAAAGCACATGGGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531389       <-- TTTCTT-GATTTCTGTTGGAAGATGAATCTGAATATAAAGCACATGGGCA  Raphanus raphanistrum subsp. maritimus
EV539725       <-- TTTCTT-GATTTCTGTTGGAAGATGAATCTGAATATAAAGCACATGGGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759533       <-- TTTCTTTGATTTCTGTTGAAAGATGAATCTGCATATAAAGCACATGGGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538096       <-- TTTCTTTGATTTCTGTTGAAAGATGAATCTGCATATAAGGCGCATGGGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545827       <-- TTTCTT-GATTTCTGTTGGAAGATGAATCTGAATATAAAGCACATGGGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720622       <-- TTTCTT-GATTTCTGTTGGAAGATGAATCTGAATATAAAGCACATGGGCA  Raphanus sativus var. oleiformis
EW719580       <-- TTTCTT-GATTTCTGTTGGAAGATGAATCTGAATATAAAGCACATGGGCA  Raphanus sativus var. oleiformis
EV546253       <-- TTTCTT-GATTTCTGTTGGAAGATGAATCTGAATATAAAGCACATGGGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD565949       <-- TTTCTT-GATTTCTGTTGGAAGATGAATCTGAATATAAAGCACATGGGCA  Raphanus sativus var. oleiformis
FD985258       <-- .TTCTT-GATTTCTGTTGGAAGATGAATCTGAATATAAAGCACATGGGCA  Raphanus raphanistrum subsp. landra
EV546656       <-- ..TCTT-GATTTCTGTTGGAAGATGAATCTGTATATAAAGCACATGGGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW729057       <-- ...CTT-GATTTCTGTTGAAAGATGAATCTGAATATAAAGCACATGGGTA  Raphanus sativus cv Early Scarlet Globe
EY927340       <-- .........................gATCTGAATATAAAGCACATGGGCA  Raphanus sativus var. oleiformis
FD537499       <-- ...............................cATATAAAGCACATGGGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY896212       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD961361       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD961191       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV534942       --> TTTCTT-GATTTCTGTTGGAAGATGAATCTGAATATAAAGCACATGGGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723900       --> TTTCTT-GATTTCTGTTGAAAGATGAATCTGAATATAAAGCACATGGGTA  Raphanus sativus cv Early Scarlet Globe
FD561918       --> TTTCTT-GATTTCTGTTGGAAGATGAATCTGAATATAAAGCACATGGGCA  Raphanus sativus var. oleiformis
FD564332       --> TTTCTT-GATTTCTGTTGGAAGATGAATCTGAATATAAAGCACATGGGCA  Raphanus sativus var. oleiformis
FD965454       --> TTTCTT-GATTTCTGTTGGAAGATGAATCTGAATATAAAGCACATGGGCA  Raphanus raphanistrum subsp. maritimus
FD965687       --> TTTCTT-GATTTCTGTTGGAAGATGAATCTGAATATAAAGCACATGGGCA  Raphanus raphanistrum subsp. maritimus
FD989485       --> TTTCTT-GATTTCTGTTGGAAGATGAATCTGAATATAAAGCACATGGGCA  Raphanus raphanistrum subsp. landra
EV551583       --> TTTCTT-GATTTCTGTTGGAAGATGAATCTGTATATAAAGCACATGGGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541146       --> TTTCTTTGATTTCTGTTGAAAGATGAATCTGCATATAAAGCACATGGGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541911       --> TTTCTTTGATTTCTGTTGAAAGATGAATCTGCATATAAGGCGCATGGGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549799       --> TTTCTT-GATTTCTGTTGGAAGATGAATCTGAATATAAAGCACATGGGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717016       --> TTTCTT-GATTTCTGTTGGAAGATGAATCTGAATATAAAGCACATGGGCA  Raphanus sativus var. oleiformis
EW715934       --> TTTCTT-GATTTCTGTTGGAAGATGAATCTGAATATAAAGCACATGGGCA  Raphanus sativus var. oleiformis
FD964396       --> TTTCTT-GATTTCTGTTGGAAGATGAATCTGAATATAAAGCACATGGGCA  Raphanus raphanistrum subsp. maritimus
EW714194       --> TTTCTT-GATTTCTGTTGGAAGATGAATCTGAATATAAAGCACATGGGCA  Raphanus sativus var. oleiformis
EV551085       --> TTTCTT-GATTTCTGTTGGAAGATGAATCTGAATATAAAGCACATGGGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD562766       --> ..............GTTGGAAGATGAATCTGAATATAAAGCACATGGGCA  Raphanus sativus var. oleiformis
EY931363       --> .........................gATCTGAATATAAAGCACATGGGCA  Raphanus sativus var. oleiformis
EV527054       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               151    -    201
UN14704        --> AAATGATCTATCAAGATTCAAGTAGGACAGAAGAAGAAGAAGA---CCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531389       <-- AAATGATCTATCAAGATTCAAGTAGGACAGAAGAAGAAGAAGA---CCTT
EV539725       <-- AAATGATCTATCAAGATTCAAGTAGGACAGAAGAAGAAGAAGA---CCTT
EX759533       <-- AAATGATCTATCAAGGTTCAAGTAGGACAGAAGAAGAAGAAGA---CCTT
FD538096       <-- AAATGATCTATCAAGATTCAAGTAGGACAGAAGAAGAAGAAGA---CCTT
FD545827       <-- AAATGATCTATCAAGATTCAAGTAGGACAGAAGAAGAAGAAGA---CCTT
EW720622       <-- AAATGATCTATCAAGATTCAAGTAGGACAGAAGAAGAAGAAGA---CCTT
EW719580       <-- AAATGATCTATCAAGATTCAAGTAGGACAGAAGAAGAAGAAGA---CCTT
EV546253       <-- AAATGATCTATCAAGATTCAAGTAGGACAGAAGAAGAA---GA---CCTT
FD565949       <-- AAATGATCTATCAAGATTCAAGTAGGACAGAAGAAGAAGAAGA---CCTT
FD985258       <-- AAATGATCTATCAAGATTCAAGTAGGACAGAAGAAGAAGAAGA---CCTT
EV546656       <-- AAATGATCTATCAAGATTCAAGTAGGACAGAAGAAGAAGAAGA---CCTT
EW729057       <-- AAATGATCTATCAAGATTCAAGTAGGACAGAAGAAGAAGAAGA---CCTT
EY927340       <-- AAATGATCTATCAAGATTCAAGTAGGACAGAAGAAGAAGAAGA---CCTT
FD537499       <-- AAATGATCTATCAAGATTCAAGTAGGACAGAAGAAGAAGAAGA---CCTT
EY896212       <-- ..................................................
FD961361       <-- ..................................................
FD961191       <-- ..................................................
EV534942       --> AAATGATCTATCAAGATTCAAGTAGGACAGAAGAAGAAGAAGA---CCTT
EW723900       --> AAATGATCTATCAAGATTCAAGTAGGACAGAAGAAGAAGAAGA---CCTT
FD561918       --> AAATGATCTATCAAGATTCAAGTAGGACAGAAGAAGAAGAAGA---CCTT
FD564332       --> AAATGATCTATCAAGATTCAAGCAGGACAGAAGAAGAAGAAGA---CCTT
FD965454       --> AAATGATCTATCAAGATTCAAGTAGGACAGAAGAAGAAGAAGAAGACCTT
FD965687       --> AAATGATCTATCAAGATTCAAGTAGGACAGAAGAAGAAGAAGA---CCTT
FD989485       --> AAATGATCTATCAAGATTCAAGTAGGACAGAAGAAGAAGAAGA---CCTT
EV551583       --> AAATGATCTATCAAGATTCAAGTAGGACAGAAGAAGAAGAAGA---CCTT
FD541146       --> AAATGATCTATCAAGATTCAAGTAGGACAGAAGAAGAAGAAGA---CCTT
FD541911       --> AAATGATCTATCAAGATTCAAGTAGGACAGAAGAAGAAGAAGA---CCTT
FD549799       --> AAATGATCTATCAAGATTCAAGTAGGACAGAAGAAGAA............
EW717016       --> AAATGATCTATCAAGATTCAAGTAGGACAGAAGAAGAAGAAGA---CCTT
EW715934       --> AAATGATCTATCAAGATTCAAGTAGGACAGAAGAAGAAGAAGA---CCTT
FD964396       --> AAATGATCTATCAAGATTCAAGTAGGGCAGAAGAAGAAGAAGA---CCTT
EW714194       --> AAATGATCTATCAAGATTCAAGTAGGACAGAAGAAGAAGAAGA---CCTT
EV551085       --> AAATGATCTATCAAGATTCAAGTAGGACAGAAGAAGAAGA------CCTT
FD562766       --> AAATGATCTATCAAGATTCAAGTAGGACAGAAGAAGAAGAAGA---CCTT
EY931363       --> AAATGATCTATCAAGATTCAAGTAGGACAGAAGAAGAAGAAGA---CCTT
EV527054       --> ..................................................

               201    -    251
UN14704        --> GTTGAAGGAGTTTCAAGATCAATGTTAGAAGCTGAAACATTCTCCGGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531389       <-- GTTGAAGGAGTTTCAAGATCAATGTTAGAAGCTGAAACATTCTCCGGGGA  Raphanus raphanistrum subsp. maritimus
EV539725       <-- GTTGAAGGAGTTTCAAGATCAATGTTAGAAGCTGAAACATTCTCCGGGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759533       <-- GTTGAAGGAGTTTCAAGATCGATGTTAGAAGCTGAAACATTCTCCGGGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538096       <-- GTTGAAGGAGTTTCAAGATCGATGTTAGAAGCTGAAACATTCTCCGGGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545827       <-- GTTGAAGGAGTTTCAAGATCAATGTTAGAAGTTGAAACATTCTCCGGGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720622       <-- GTTGAAGGAGTTTCAAGATCAATGTTAGAATCTGAAACATTCTCCGGGGA  Raphanus sativus var. oleiformis
EW719580       <-- GTTGAAGGAGTTTCAAGATCAATGTTAGAAGCTGAAACATTCTCCGGGGA  Raphanus sativus var. oleiformis
EV546253       <-- GTTGAAGGAGTTTCAAGATCAATGTTAGAAGCTGAAACATTCTCCGGGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD565949       <-- GTTGAAGGAGTTTCAAGATCAATGTTAGAAGCTGAAACATTCTCCGGGGA  Raphanus sativus var. oleiformis
FD985258       <-- GTTGAAGGAGTTTCAAGATCAATGTTAGAAGCTGAAACATTCTCCGGGGA  Raphanus raphanistrum subsp. landra
EV546656       <-- GTTGAAGGAGTTTCAAGATCAATGTTAGAAGCTGAAACATTCTCCGGGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW729057       <-- GTTGAAGGAGTTTCAAGATCGATGTTAGAAGCTGAAACATTCTCCGGGGA  Raphanus sativus cv Early Scarlet Globe
EY927340       <-- GTTGAAGGAGTTTCAAGATCAATGTTTGAAGCTGAAACATTCTCCGGGGA  Raphanus sativus var. oleiformis
FD537499       <-- GTTGAAGGAGTTCCAAGATCGATGTTAGAAGCTGAAACATTCTCCGGGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY896212       <-- ..............AAGATCAATGTTAGAAGCTGAAACATTCTCCGGGGA  Raphanus raphanistrum subsp. maritimus
FD961361       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD961191       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV534942       --> GTTGAAGGAGTTTCAAGATCAATGTTAGAAGCTGAAACATTCTCCGGGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723900       --> GTTGAAGGAGTTTCAAGATCGATGTTAGAAGCTGAAACATTCTCCGGGGA  Raphanus sativus cv Early Scarlet Globe
FD561918       --> GTTGAAGGAGTTTCAAGATCAATGTTAGAAGCTGAAACATTCTCCGGGGA  Raphanus sativus var. oleiformis
FD564332       --> GTTGAAGGAGTTTCAAGATCAATGTTAGAAGCTGAAACATTCTCCGGGGA  Raphanus sativus var. oleiformis
FD965454       --> GTTGAAGGAGTTTCAAGATCAATGTTAGAAGCTGAAACATTCTCCGGGGA  Raphanus raphanistrum subsp. maritimus
FD965687       --> GTTGAAGGAGTTTCAAGATCAATGTTAGAAGCTGAAACATTCTCCGGGGA  Raphanus raphanistrum subsp. maritimus
FD989485       --> GTTGAAGGAGTTTCAAGATCAATGTTAGAAGCTGAAACATTCTCCGGGGA  Raphanus raphanistrum subsp. landra
EV551583       --> GTTGAAGGAGTTTCAAGATCAATGTTAGAAGCTGAAACATTCTCCGGGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541146       --> GTTGAAGGAGTTCCAAGATCGATGTTAGAAGCTGAAACATTCTCCGGGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541911       --> GTTGAAGGAGTTTCAAGATCGATGTTAGAAGCTGAAACATTCTCCGGGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549799       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717016       --> GTTGAAGGAGTTTCAAGATCAATGTTAGAATCTGAAACATTCTCCGGGGA  Raphanus sativus var. oleiformis
EW715934       --> GTTGAAGGAGTTTCAAGATCAATGTTAGAAGCTGAAACATTCTCCGGGGA  Raphanus sativus var. oleiformis
FD964396       --> GTTGAAGGAGTTTCAAGATCAATGTTAGAAGCTGAAACATTTTCCGGGGA  Raphanus raphanistrum subsp. maritimus
EW714194       --> GTTGAAGGAGTTTCAAGATCAATGTTAGAAGCTGAAACATTCTCCGGGGA  Raphanus sativus var. oleiformis
EV551085       --> GTTGAAGGAGTTTCAAGATCAATGTTAGAAGCTGAAACATTCTCCGGGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD562766       --> GTTGAAGGAGTTTCAAGATCAATGTTAGAAGCTGAAACATTCTCCGGGGA  Raphanus sativus var. oleiformis
EY931363       --> GTTGAAGGAGTTTCAAGATCAATGTTTGAAGCTGAAACATTCTCCGGGGA  Raphanus sativus var. oleiformis
EV527054       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               251    -    301
UN14704        --> AGAAAAAGATTTGTCATCTTGTTCATTATCTTCCATGTGTTCATCTGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531389       <-- AGAAAAAGATTTGTCATCTTGTTCATTATCTTCCATGTGTTCATCTGATT  Raphanus raphanistrum subsp. maritimus
EV539725       <-- AGAAAAAGATTTGTCATCTTGTTCATTATCTTCCATGTGTTCATTTGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759533       <-- AGAAGAAGATTTGTCACCTTGTTCATTATCTTCCATGTGTTCATCTGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538096       <-- AGAAGAAGATTTGTCATCTTGTTCATTATCTTCCATGTGTTCATCTGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545827       <-- AGAAAAAGATTTGTCATCTTGTTCACTATCTTCCACGTGTTCATCTGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720622       <-- AGAAAAAGATTTGTCATCTTGTTCATTATCTTCCATGTGTTCATCTGATT  Raphanus sativus var. oleiformis
EW719580       <-- AGAAAAAGATTTGTCATCTTGTTCATTATCTTCCATGTGTTCATCTGATT  Raphanus sativus var. oleiformis
EV546253       <-- AGAAAAAGATTTGTCATCTTGTTCATTATCTTCCATGTGTTCATCTGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD565949       <-- AGAAAAAGATTTGTCATCTTGTTCATTATCTTCCATGTGTTCATCTGATT  Raphanus sativus var. oleiformis
FD985258       <-- AGAAAAAGATTTGTCATCTTGTTCATTATCTTCCATGTGTTCATCTGATT  Raphanus raphanistrum subsp. landra
EV546656       <-- AGAAAAAGATTTGTCATCTTGTTCATTATCTTCCATGTGTTCATCTGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW729057       <-- AGAAGAAGATTTGTCATCTTGTTCATTATCTTCCATGTGTTCATCTGATT  Raphanus sativus cv Early Scarlet Globe
EY927340       <-- AGAAAAAGATTTGTCATCTTGTTCATTATCTTCCATGTGTTCATCTGATT  Raphanus sativus var. oleiformis
FD537499       <-- AGAAGAAGATTTGTCATCTTGTTCATTATCTTCCATGTGTTCATCTGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY896212       <-- AGAAAAAGATTTGTCATCTTGTTCATTATCTTCCATGTGTTCATCTGATT  Raphanus raphanistrum subsp. maritimus
FD961361       <-- ......................TCATTATCTTCCATGTGTTCATCTGACT  Raphanus raphanistrum subsp. maritimus
FD961191       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV534942       --> AGAAAAAGATTTGTCATCTTGTTCATTATCTTCCATGTGTTCATCTGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723900       --> AGAAGAAGATTTGTCATCTTGTTCATTATCTTCCATGTGTTCATCTGATT  Raphanus sativus cv Early Scarlet Globe
FD561918       --> AGAAAAAGATTTGTCATCTTGTTCATTATCTTCCATGTGTTCATCTGATT  Raphanus sativus var. oleiformis
FD564332       --> AGAAAAAGATTTGTCATCTTGTTCATTATCTTCCATGTGTTCATCTGATT  Raphanus sativus var. oleiformis
FD965454       --> AGAGAAAGATTTGTCATCTTGTTCATTATCTTCCATGTGTTCATCTGATT  Raphanus raphanistrum subsp. maritimus
FD965687       --> AGAAAAAGATTTGTCATCTTGTTCATTATCTTCCATGTGTTCATCTGACT  Raphanus raphanistrum subsp. maritimus
FD989485       --> AGAAAAAGATTTGTCATCTTGTTCATTATCTTCCATGTGTTCATCTGATT  Raphanus raphanistrum subsp. landra
EV551583       --> AGAAAAAGATTTGTCATCTTGTTCATTATCTTCCATGTGTTCATCTGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541146       --> AGAAGAAGATTTGTCATCTTGTTCATTATCTTCCATGTGTTCATCTGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541911       --> AGAAGAAGATTTGTCATCTTGTTCATTATCTTCCATGTGTTCATCTGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549799       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717016       --> AGAAAAAGATTTGTCATCTTGTTCATTATCTTCCATGTGTTCATCTGATT  Raphanus sativus var. oleiformis
EW715934       --> AGAAAAAGATTTGTCATCTTGTTCATTATCTTCCATGTGTTCATCTGATT  Raphanus sativus var. oleiformis
FD964396       --> AGAAAAAGATTTGTCATCTTGTTCATTATCTTCCATGTGTTCATCTGATT  Raphanus raphanistrum subsp. maritimus
EW714194       --> AGAAAAAGATTTGTCATCTTGTTCATTATCTTCCATGTGTTCATCTGATT  Raphanus sativus var. oleiformis
EV551085       --> AGAAAAAGATTTGTCATCTTGTTCATTATCTTCCATGTGTTCATCTGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD562766       --> AGAAAAAGATTTGTCATCTTGTTCATTATCTTCCATGTGTTCATCTGATT  Raphanus sativus var. oleiformis
EY931363       --> AGAGAAAGATTTGTCATCTTGTTCATTATCTTCCATGTGTTCATCTGATT  Raphanus sativus var. oleiformis
EV527054       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               301    -    351
UN14704        --> TAACAGAGGAGGATGATGATGCTTCTTCATCTTTTTCAAATGGACCTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531389       <-- TAACAGAGGAGGATGATGATGCTTCTTCATCTTTTTCAAATGGACCTCTT
EV539725       <-- TAACAGAGGAGGATGATGATGCTTCCTCATCTTTTTCAAATGGACCTCTT
EX759533       <-- TAACAGAGGAGGATGATGATGCTTCTTCATCTTTTTCAAATGGACCTCTT
FD538096       <-- TAACAGAGGAGGATGATGATGCTTCTTCATCTTTTTCAAATGGACCTCTT
FD545827       <-- TAACAGAGGAGGATGATGGTGCTTCTTCATCTTTTTCAAATGGACCTCTT
EW720622       <-- TAACAGAGGAGGATGATGATGCTTCTTCATCTTTTTCAAATGGACCTCTT
EW719580       <-- TAACAGAGGAGGATGATGATGCTTCTTCATCTTTTTCAAATGGACCTCTT
EV546253       <-- TAACAGAGGAGGATGATGATGCTTCTTCATCTTTTTCAAATGGACCTCTT
FD565949       <-- TAACAGAGGAGGATGATGATGCTTCTTCATCTTTTTCAAATGGACCTCTT
FD985258       <-- TAACAGAGGAGGAGGATGATGCCTCTTCATCTTTTTCAAATGGACCTCTT
EV546656       <-- TAACAGAGGAGGATGATGATGCTTCTTCATCTTTTTCAAATGGACCTCTT
EW729057       <-- TAACAGAGGAGGATGATGATGCTTCTTCATCTTTTTCAAATGGACCTCTT
EY927340       <-- TAACAGAGGAGGATGATGATGCTTCTTCATCTTTTTCAAATGGACCTCTT
FD537499       <-- TAACAGAGGAGGATGATGATGCTTCTTCATCTTTTTCAAATGGACCTCTT
EY896212       <-- TAACAGAGGAGGATGATGATGCTTCTTCATCTTTTTCAAATGGACCTCTT
FD961361       <-- TAACAGAGGAGGATGATGATGCTTCTTCATCTTTTTCAAATGGACCTCTT
FD961191       <-- ..................................................
EV534942       --> TAACAGAGGAGGATGATGATGCTTCCTCATCTTTTTCAAATGGACCTCTT
EW723900       --> TAACAGAGGAGGATGATGATGCTTCTTCATCTTTTTCAAATGGACCTCTT
FD561918       --> TAACAGAGGAGGATGATGATGCTTCTTCATCTTTTTCAAATGGACCTCTT
FD564332       --> TAACAGAGGAGGATGATGATGCTTCTTCATCTTTTTCAAATGGACCTCTT
FD965454       --> TAACAGAGGAGGATGATGATGCTTCTTCATCTTTTTCAAATGGACCTCTT
FD965687       --> TAACAGAGGAGGATGATGATGCTTCTTCATCTTTTTCAAATGGACCTCTT
FD989485       --> TAACAGAGGAGGAGGATGATGCCTCTTCATCTTTTTCAAATGGACCTCTT
EV551583       --> TAACAGAGGAGGATGATGATGCTTCTTCATCTTTTTCAAATGGACCTCTT
FD541146       --> TAACAGAGGAGGATGATGATGCTTCTTCATCTTTTTCAAATGGACCTCTT
FD541911       --> TAACAGAGGAGGATGATGATGCTTCTTCATCTTTTTCAAATGGACCTCTT
FD549799       --> ..................................................
EW717016       --> TAACAGAGGAGGATGATGATGCTTCTTCATCTTTTTCAAATGGACCTCTT
EW715934       --> TAACAGAGGAGGATGATGATGCTTCTTCATCTTTTTCAAATGGACCTCTT
FD964396       --> TAACAGAGGAGGATGATGATGCTTCTTCATCTTTTTCAAATGGACCTCTT
EW714194       --> TAACAGAGGAGGATGATGATGCTTCTTCATCTTTTTCAAATGGACCTCTT
EV551085       --> TAACAGAGGAGGATGATGATGCTTCTTCATCTTTTTCAAATGGACCTCTT
FD562766       --> TAACAGAGGAGGATGATGATGCTTCTTCATCTTTTTCAAATGGACCTCTT
EY931363       --> TAACAGAGGAGGATGATGATGCTTCTTCATCTTTTTCAAATGGACCTCTT
EV527054       --> ..................................................

               351    -    401
UN14704        --> GAAGATCTCTCTGACCTCATGTTACACCTCCCAATCAAGAGGGGATTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531389       <-- GAAGATCTCTCTGACCTCATGTTACACCTCCCAATCAAGAGGGGATTGTC
EV539725       <-- GAAGATCTCTCTGACCTCATGTTACACCTCCCAATCAAGAGGGGATTGTC
EX759533       <-- GGAGATCTCTCTGACCTCATGTTACACCTCCCAATCAAGAGGGGATTGTC
FD538096       <-- GGAGATCTCTCTGACCTCATGTTACACCTCCCAATCAAGAGGGGATTGTC
FD545827       <-- GAAGATCTCTCTGACCTCATGTTACACCTCCCAATCAAGAGGGGATTGTC
EW720622       <-- GAAGATCTCTCTGACCTCATGTTACACCTCCCAATCAAGAGGGGATTGTC
EW719580       <-- GAAGATCTTTCTGACCTCATGTTACACCTCCCAATCAAGAGGGGATTGTC
EV546253       <-- GAAGATCTTTCTGACCTCATGTTACACCTCCCAATCAAGAGGGGATTGTC
FD565949       <-- GAAGATCTCTCTGACCTCATGTTACACCTCCCAATCAAGAGGGGATTGTC
FD985258       <-- GAAGATCTCTCTGACCTCATGTTACACCTCCCAATCAAGAGGGGATTGTC
EV546656       <-- GAAGATCTCTCTGACCTCATGTTACACCTCCCAATCAAGAGGGGATTGTC
EW729057       <-- GAAGATCTTTCTGACCTCATGTTACACCTCCCAATCAAGAGGGGATTGTC
EY927340       <-- GAAGATCTCTCTGACCTCATGTTACACCTCCCAATCAAGAGGGGATTGTC
FD537499       <-- GGAGATCTCTCTGACCTCATGTTACACCTCCCAATCAAGAGGGGATTGTC
EY896212       <-- GAAGATCTCTCTGACCTCATGTTACACCTCCCAATCAAGAGGGGATTGTC
FD961361       <-- GAAGATCTCTCTGACCGCATGTTACACCTCCCAATCAAGAGGGGATTGTC
FD961191       <-- ..................................................
EV534942       --> GAAGATCTCTCTGACCTCATGTTACACCTCCCAATCAAGAGGGGATTGTC
EW723900       --> GAAGATCTCTCTGACCTCATGTTACACCTCCCAATCAAGAGGGGATTGTC
FD561918       --> GAAGATCTCTCTGACCTCATGTTACACCTCCCAATCAAGAGGGGATTGTC
FD564332       --> GAAGATCTCTCTGACCTCATGTTACACCTCCCAATCAAGAGGGGATTGTC
FD965454       --> GAAGATCTCTCTGACCTCATGTTACACCTCCCAATCAAGAGGGGATTGTC
FD965687       --> GAAGATCTCTCTGACCGCATGTTACACCTCCCAATCAAGAGGGGATTGTC
FD989485       --> GAAGATCTCTCTGACCTCATGTTACACCTCCCAATCAAGAGGGGATTGTC
EV551583       --> GAAGATCTCTCTGACCTCATGTTACACCTCCCAATCAAGAGGGGATTGTC
FD541146       --> GGAGATCTCTCTGACCTCATGTTACACCTCCCAATCAAGAGGGGATTGTC
FD541911       --> GGAGATCTCTCTGACCTCATGTTACACCTCCCAATCAAGAGGGGATTGTC
FD549799       --> ..................................................
EW717016       --> GAAGATCTCTCTGACCTCATGTTACACCTCCCAATCAAGAGGGGATTGTC
EW715934       --> GAAGATCTCTCTGACCTCATGTTACACCTCCCAATCAAGAGGGGATTGTC
FD964396       --> GAAGATCTCTCTGACCTCATGTTACACCTCCCAATCAAGAGGGGATTGTC
EW714194       --> GAAGATCTCTCTGACCTCATGTTACACCTCCCAATCAAGAGGGGATTGTC
EV551085       --> GAAGATCTCTCTGACCTCATGTTACACCTCCCAATCAAGAGGGGATTGTC
FD562766       --> GAAGATCTCTCTGACCTCATGTTACACCTCCCAATCAAGAGGGGATTGTC
EY931363       --> GAAGATCTCTCTGACCTCATGTTACACCTCCCAATCAAGAGGGGATTGTC
EV527054       --> ........CTCTGACCTCATGTTACACCTCCCAATCAAGAGGGGATTGTC

               401    -    451
UN14704        --> AAAGTTTT-ATGAAGGAAAATCTCAATCATT-CACATCACTAGCAAATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531389       <-- AAAGTTTT-ATGAAGGAAAATCTCAATCATT-CACATCACTAGCAAATGT
EV539725       <-- AAAGTTTT-ATGAAGGAAAATCTCAATCATT-CACATCACTAGCAAATGT
EX759533       <-- AAAGTTTT-ATGAAGGAAAATCTCAACCATT-CACATCACTAGCAAATGT
FD538096       <-- AAAGTTTT-ATGAAGGAAAATCTCAATCATT-CACATCACTAGCAAATGT
FD545827       <-- AA-GTTTT-ATGAAGGAAAATCTCAATCATT-CACATCACTAGCAAATGT
EW720622       <-- AAAGTTTT-ATGAAGGAAAATCTCAATCATT-CACATCACTAGCAAATGT
EW719580       <-- AAAGTTTT-ATGAAGGAAAATCTCAATCATT-CACATCACTAGCAAATGT
EV546253       <-- AAAGTTTT-ATGAAGGAAAATCTCAATCATT-CACATCACTAGCAAATGT
FD565949       <-- AAAGTTTT-ATGAAGGAAAATCTCAATCATT-CACATCACTAGCAAATGT
FD985258       <-- AAAGTTTT-ATGAAGGAAAATCTCAATCATT-CACATCACTAGCAAATGT
EV546656       <-- AAAGTTTT-ATGAAGGAAAATCTCAATCATT-CACATCACTAGCAAATGT
EW729057       <-- AAAGTTTT-ATGAAGGAAAATCTCAATCATT-CACATCACTAGCAAATGT
EY927340       <-- AAAGTTTT-ATGAAGGAAAATCTCAATCATT-CACATCACTAGCAAATGT
FD537499       <-- AAAGTTTT-ATGAAGGAAAATCTCAATCATT-CACATCACTAGCAAATGT
EY896212       <-- AAAGTTTT-ATGAAGGAAAATCTCAATCATT-CACATCACTAGCAAATGT
FD961361       <-- AAAGTTTT-ATGAAGGAAAATCTCAATCATT-CACATCACTAGCAAATGT
FD961191       <-- .............................TT-CACATCACTAGCAAATGT
EV534942       --> AAAGTTTT-ATGAAGGAAAATCTCAATCATT-CACATCACTAGCAAATGT
EW723900       --> AAAGTTTT-ATGAAGGAAAATCTCAATCATT-CACATCACTAGCAAATGT
FD561918       --> AAAGTTTT-ATGAAGGAAAATCTCAATCATT-CACATCACTAGCAAATGT
FD564332       --> AAAGTTTT-ATGAAGGAAAATCTCAATCATT-CACATCACTAGCAAATGT
FD965454       --> AAAGTTTT-ATGAAGGAAAATCTCAATCATT-CACATCACTAGCAAATGT
FD965687       --> AAAGTTTT-ATGAAGGAAAATCTCAATCATT-CACATCACTAGCAAATGT
FD989485       --> AAAGTTTT-ATGAAGGAAAATCTCAATCATT-CACATCACTAGCAAATGT
EV551583       --> AAAGTTTT-ATGAAGGAAAATCTCAATCATT-CACATCACTAGCAAATGT
FD541146       --> AAAGTTTT-ATGAAGGAAAATCTCAATCATT-CACATCACTAGCAAATGT
FD541911       --> AAAGTTTT-ATGAAGGAAAATCTCAATCATT-CACATCACTAGCAAATGT
FD549799       --> ..................................................
EW717016       --> AAAGTTTT-ATGAAGGAAAATCTCAATCATT-CACATCACTAGCAAATGT
EW715934       --> AAAGTTTT-ATGAAGGAAAATCTCAATCATT-CACATCACTAGCAAATGT
FD964396       --> AAAGTTTT-ATGAAGGAAAATCTCAATCATT-CACATCACTAGCAAATGT
EW714194       --> AAAGTTTT-ATGAAGGAAAATCTCAATCATT-CACATCACTGGCAAATGT
EV551085       --> AAAGTTTT-ATGAAGGAAAATCTCAATCATT-CACATCACTAGCAAATGT
FD562766       --> AAAGTTTT-ATGAAGGAAAATCTCAATCATT-CACATCACTAGCAAATGT
EY931363       --> AAAGTTTT-ATGAAGGAAAATCTCAATCATT-CACATCACTAGCAAATGT
EV527054       --> AAAGTTTTTATGAAGGAAAATCTCAATCATTTCACATCACTAGCAAATGT

               451    -    501
UN14704        --> TAAAAGTCTTGAAGATCTTATGAAGAGAGGTTTTAAAAATACAAGTAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531389       <-- TAAAAGTCTTGAAGATCTTATGAAGAGAGGTTTTAAAAATACAACTAATA  Raphanus raphanistrum subsp. maritimus
EV539725       <-- TAAAAGTCTTGAAGATCTTATGAAGAGAGGTTTTAAAAATACAAGTAATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759533       <-- TAAAAGTCTTGAAGATCTTATGAAGAGAGGTTTTAAAAATACAAGTAATA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538096       <-- TAAAAGTCTTGAAGATCTTATGAAGAGAGGTTTTAAAAATACAAGTAATA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545827       <-- TAAAAGTCTTGAAGATCTTATGAAGAGAGGTTTTAAAAATACAACTAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720622       <-- TAAAAGTCTTGAAGATCTTATGAAGAGAGGTTTTAAAAATACAAGTAATA  Raphanus sativus var. oleiformis
EW719580       <-- TAAAAGTCTTGAAGATCTTATGAAGAGAGGTTTTAAAAATACAAGTAATA  Raphanus sativus var. oleiformis
EV546253       <-- TAAAAGTCTTGAAGATCTTATGAAGAGAGGTTTTAAAAATACAACTAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD565949       <-- TAAAAGTCTTGAAGATCTTATGAAGAGAGGTTTTAAAAATACAAGTAATA  Raphanus sativus var. oleiformis
FD985258       <-- TAAAAGTCTTGAAGATCTTATGAAGAGAGGTTTTAAAAATACAAGTAATA  Raphanus raphanistrum subsp. landra
EV546656       <-- TAAAAGTCTTGAAGATCTTATGAAGAGAGGTTTTAAAAATACAACTAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW729057       <-- TAAA-GTCTTGAAGATCTTATGAAGAGAGGTTTTAAAAATACAAGTAATA  Raphanus sativus cv Early Scarlet Globe
EY927340       <-- TAAAAGTCTTGAAGATCTTATGAAGAGAGGTTTTAAAAATACAAGTAATA  Raphanus sativus var. oleiformis
FD537499       <-- TAAAAGTCTTGAAGATCTTATGAAGAGAGGTTTTAAAAATACAAGTAACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY896212       <-- TAAAAGTCTTGAAGATCTTATGAAGAGAGGTTTTAAAAATACAACTAATA  Raphanus raphanistrum subsp. maritimus
FD961361       <-- TAAAAGTCTTGAAGATCTTATGAAGAGAGGTTTTAAAGATACAACTAATA  Raphanus raphanistrum subsp. maritimus
FD961191       <-- TAAAAGTCTTGAAGATCTTATGAAGAGAGGTTTTAAAAATACAACTAATA  Raphanus raphanistrum subsp. maritimus
EV534942       --> TAAAAGTCTTGAAGATCTTATGAAGAGAGGTTTTAAAAATACAAGTAATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723900       --> TAAA-GTCTTGAAGATCTTATGAAGAGAGGTTTTAAAAATACAAGTAATA  Raphanus sativus cv Early Scarlet Globe
FD561918       --> TAAAAGTCTTGAAGATCTTATGAAGAGAGGTTTTAAAAATACAAGTAATA  Raphanus sativus var. oleiformis
FD564332       --> TAAAAGTCTTGAAGATCTTATGAAGAGAGGTTTTAAAAATACAAGTAATA  Raphanus sativus var. oleiformis
FD965454       --> TAAAAGTCTTGAAGATCTTATGAAGAGAGGTTTTAAAAATACAACTAATA  Raphanus raphanistrum subsp. maritimus
FD965687       --> TAAAAGTCTTGAAGATCTTATGAAGAGAGGTTTTAAAGATACAACTAATA  Raphanus raphanistrum subsp. maritimus
FD989485       --> TAAAAGTCTTGAAGATCTTATGAAGAGAGGTTTTAAAAATACAAGTAATA  Raphanus raphanistrum subsp. landra
EV551583       --> TAAAAGTCTTGAAGATCTTATGAAGAGAGGTTTTAAAAATACAACTAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541146       --> TAAAAGTCTTGAAGATCTTATGAAGAGAGGTTTTAAAAATACAAGTAACA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541911       --> TAAAAGTCTTGAAGATCTTATGAAGAGAGGTTTTAAAAATACAAGTAATA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549799       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717016       --> TAAAAGTCTTGAAGATCTTATGAAGAGAGGTTTTAAAAATACAAGTAATA  Raphanus sativus var. oleiformis
EW715934       --> TAAAAGTCTTGAAGATCTTATGAAGAGAGGTTTTAAAAATACAAGTAATA  Raphanus sativus var. oleiformis
FD964396       --> TAAAAGTCTTGAAGATCTTATGAAGAGAGGTTTTAAAAATACGACTAATA  Raphanus raphanistrum subsp. maritimus
EW714194       --> TAAAAGTCTTGAAGATCTTATGAAGAGAGGTTTTAAAAATACAAGTAATA  Raphanus sativus var. oleiformis
EV551085       --> TAAAAGTCTTGAAGATCTTATGAAGAGAGGTTTTAAAAATACAACTAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD562766       --> TAAAAGTCTTGAAGATCTTATGAAGAGAGGTTTTAAAAATACAAGTAATA  Raphanus sativus var. oleiformis
EY931363       --> TAAAAGTCTTGAAGATCTTATGAAGAGAGGTTTTAAAAATACAAGTAATA  Raphanus sativus var. oleiformis
EV527054       --> TAAAAGTCTTtgaa....................................  Raphanus raphanistrum subsp. maritimus

               501    -    551
UN14704        --> AAGCAAGAAGAAAGGCATGTAAGAGCACCGGAGGAATAATAGATCAAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531389       <-- AAGCAAGAAGAAAGGCATGTAAGAGCACCGGAGGAATAATAGATCAAAGC  Raphanus raphanistrum subsp. maritimus
EV539725       <-- AAGCAAGAAGAAAGGCATGTAAGAGCACCGGAGGAATAATAGATCAAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759533       <-- AAGCAAGAAGAAAGGCATGTAAGAGCACCGGAGGAATAATAGATCAAAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538096       <-- AAGCAAGAAGAAAGGCATGTAAGAGCACCGGAGGAATAATAGATCAAAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545827       <-- AAGCAAGAAGAAAGGCATGTAAGAGCACCGGAGGAATAATAGATCAAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720622       <-- AAGCAAGAAGAAAGGCATGTAAGAGCACCGGAGAAATAATAGATCAAAGC  Raphanus sativus var. oleiformis
EW719580       <-- AAGCAAGAAGAAAGGCATGTAAGAGCACCGGAGAAATAATAGATCAAAGC  Raphanus sativus var. oleiformis
EV546253       <-- AAGCAAGAAGAAAGGCATGTAAGAGCACCGGAGGAATAATAGATCAAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD565949       <-- AAGCAAGAAGAAAGGCATGTAAGAGCACCGGAGAAATAATAGATCAAAGC  Raphanus sativus var. oleiformis
FD985258       <-- AAGCAAGAAGAAAGGCATGTAAGAGCACCGGAGGAATAATAGATCAAAGC  Raphanus raphanistrum subsp. landra
EV546656       <-- AAGCAAGAAGAAAGGCATGTAAGAGCACCGGAGGAATAATAGATCAAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW729057       <-- AAGCAAGAAGAAAGGCATGTAAGAGCACCGGAGGAATAATAGATCAAAGT  Raphanus sativus cv Early Scarlet Globe
EY927340       <-- AAGCAAGAAGAAAGGCATGTAAGAGCACCGGAGAAATAATAGATCAAAGC  Raphanus sativus var. oleiformis
FD537499       <-- AAGCAAGAAGAAAGGCATGTAAGAGCACCGGAGGAATAATAGATCAAAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY896212       <-- AAGCAAGAAGAAAGGCATGTAAGAGCACCGGAGGAATAATAGATCAAAGC  Raphanus raphanistrum subsp. maritimus
FD961361       <-- AAGCAAGAAGAAAGGCATGTAAGAGCACCGGAGGAATAATAGATCAAAGC  Raphanus raphanistrum subsp. maritimus
FD961191       <-- AAGCAAGAAGAAAGGCATGTAAGAGCACCGGAGGAATAATAGATCAAAGC  Raphanus raphanistrum subsp. maritimus
EV534942       --> AAGCAAGAAGAAAGGCATGTAAGAGCACCGGAGGAATAATAGATCAAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723900       --> AAGCAAGAAGAAAGGCATGTAAGAGCACCGGAGGAATAATAGATCAAAGT  Raphanus sativus cv Early Scarlet Globe
FD561918       --> AAGCAAGAAGAAAGGCATGTAAGAGCACCGGAGAAATAATAGATCAAAGC  Raphanus sativus var. oleiformis
FD564332       --> AAGCAAGAAGAAAGGCATGTAAGAGCACCGGAGAAATAATAGATCAAAGC  Raphanus sativus var. oleiformis
FD965454       --> AAGCAAGAAGAAAGGCATGTAAGAGCACCGGAGGAATAATAGATCAAAGC  Raphanus raphanistrum subsp. maritimus
FD965687       --> AAGCAAGAAGAAAGGCATGTAAGAGCACCGGAGGAATAATAGATCAAAGC  Raphanus raphanistrum subsp. maritimus
FD989485       --> AAGCAAGAAGAAAGGCATGTAAGAGCACCGGAGGAATAATAGATCAAAGC  Raphanus raphanistrum subsp. landra
EV551583       --> AAGCAAGAAGAAAGGCATGTAAGAGCACCGGAGGAATAATAGATCAAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541146       --> AAGCAAGAAGAAAGGCATGTAAGAGCACCGGAGGAATAATAGATCAAAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541911       --> AAGCAAGAAGAAAGGCATGTAAGAGCACCGGAGGAATAATAGATCAAAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549799       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717016       --> AAGCAAGAAGAAAGGCATGTAAGAGCACCGGAGAAATAATAGATCAAAGC  Raphanus sativus var. oleiformis
EW715934       --> AAGCAAGAAGAAAGGCATGTAAGAGCACCGGAGAAATAATAGATCAAAGC  Raphanus sativus var. oleiformis
FD964396       --> AAGCAAGAAGAAAGGCATGTAAGAGCACC.....................  Raphanus raphanistrum subsp. maritimus
EW714194       --> AAGCAAGAAGAAAGGCATGTAAGAGCACCGGAGAAATAATAGATCAAAGC  Raphanus sativus var. oleiformis
EV551085       --> AAGCAAGAAGAAAGGCATGTAAGAGCACCGGAGGAATAATAGATCAAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD562766       --> AAGCAAGAAGAAAGTCATGTAAGAGCACCGGAGAAATAATAGATCAAAGC  Raphanus sativus var. oleiformis
EY931363       --> AAGCAAGAAGAAAGGCATGTAAGAGCACCGGAGAAATAATAGATCAAAGC  Raphanus sativus var. oleiformis
EV527054       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               551    -    601
UN14704        --> TACAAAAGGGTTTATAGCCCAAAAGCTACAATCTCCAAGAAAGCCAACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531389       <-- TACAAAAGGGTTTATAGCCCAAAAGCTACAATCTCCAAGAAAACCAACAA  Raphanus raphanistrum subsp. maritimus
EV539725       <-- TACAAAAGGGTTTATAGCCCAAAAGCTACAATCTCCAAGAAAGCCACAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759533       <-- TACAAAAGGGTTTATAGCCCAAAAGCTACAATCTCCAAGAAAGCCACAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538096       <-- TACAAAAGGGTTTATAGCCCAAAAGCTACAATCTCCAAGAAAGCCACAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545827       <-- TACAAAAGGGTTTATAGCCCAAAAGCTACAATCTCCAAGAAAACCAACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720622       <-- TACAAAAGGGTTTATAGCCCAAAAGCTACAATCTCCAAGAAAGCCAACAA  Raphanus sativus var. oleiformis
EW719580       <-- TACAAAAGGGTTTATAGCCCAAAAGCTACAATCTCCAAGAAAGCCAACAA  Raphanus sativus var. oleiformis
EV546253       <-- TACAAAAGGGTTTATAGCCCAAAAGCTACAATCTCCAAGAAAACCAACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD565949       <-- TACAAAAGGGTTTATAGCCCAAAAGCTACAATCTCCAAGAAAGCCAACAA  Raphanus sativus var. oleiformis
FD985258       <-- TACAAAAGGGTTTATAGCCCAAAAGCTACAATCTCCAAGAAAGCCAACAA  Raphanus raphanistrum subsp. landra
EV546656       <-- TACAAAAGGGTTTATAGCCCAAAAGCTACAATCTCCAAGAAAACCAACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW729057       <-- TACAAAAGGGTTTATGGCCCAAAAGCTACAATCTCCAAGAAAGCCACAAA  Raphanus sativus cv Early Scarlet Globe
EY927340       <-- TACAAAAGGGTTTATAGCCCAAAAGCTACAATCTCCAAGAGAGCCAACAA  Raphanus sativus var. oleiformis
FD537499       <-- TACAAAAGGGTTTATAGCCCAAAAGCTACAATCTCCAAGAAAGCCACAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY896212       <-- TACAAAAGGGTTTATAGCCCAAAAGCTACAATCTCCAAGAAAACCAACAA  Raphanus raphanistrum subsp. maritimus
FD961361       <-- TGCAAAAGGGTTTATAGCCCAAAAGCTACAATCTCCAAGAAAACCAACAA  Raphanus raphanistrum subsp. maritimus
FD961191       <-- TACAAAAGGGTCTATAGCCCAAAAGCTACAATCTCCAAGAAAACCAACAA  Raphanus raphanistrum subsp. maritimus
EV534942       --> TACAAAAGGGTTTATAGCCCAAAAGCTACAATCTCCAAGAAAGCCACAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723900       --> TACAAAAGGGTTTATGGCCCAAAAGCTACAATCTCCAAGAAAGCCACAAA  Raphanus sativus cv Early Scarlet Globe
FD561918       --> TACAAAAGGGTTTATAGCCCAAAAGCTACAATCTCCAAGAAAGCCAACAA  Raphanus sativus var. oleiformis
FD564332       --> TACAAAAGGGTTTATAGCCCAAAAGCTACAATCTCCAAGAAAGCCAACAA  Raphanus sativus var. oleiformis
FD965454       --> TACAAAAGGGTCTATAGCCCAAAAGCTACAATCTCCAAGAAAACCAACAA  Raphanus raphanistrum subsp. maritimus
FD965687       --> TGCAAAAGGGTTTATAGCCCAAAAGCTACAATCTCCAAGAAAACCAACAA  Raphanus raphanistrum subsp. maritimus
FD989485       --> TACAAAAGGGTTTATAGCCCAAAAGCTACAATCTCCAAGAAAGCCAACAA  Raphanus raphanistrum subsp. landra
EV551583       --> TACAAAAGGGTTTATAGCCCAAAAGCTACAATCTCCAAGAAAACCAACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541146       --> TACAAAAGGGTTTATAGCCCAAAAGCTACAATCTCCAAGAAAGCCACAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541911       --> TACAAAAGGGTTTATAGCCCAAAAGCTACAATCTCCAAGAAAGCCACAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549799       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717016       --> TACAAAAGGGTTTATAGCCCAAAAGCTACAATCTCCAAGAAAGCCAACAA  Raphanus sativus var. oleiformis
EW715934       --> TACAAAAGGGTTTATAGCCCAAAAGCTACAATCTCCAAGAAAGCCAACAA  Raphanus sativus var. oleiformis
FD964396       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW714194       --> TACAAAAGGGTTTATAGCCCAAAAGCTACAATCTCCAAGAAAGCCAATAA  Raphanus sativus var. oleiformis
EV551085       --> TACAAAAGGGTTTATAGCCCAAAAGCTACAATCTCCAAGAAAACCAACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD562766       --> TACAAAAGGGTTTATAGCCCAAAAGCTACAATCTCCAAGAAAGCCAACAA  Raphanus sativus var. oleiformis
EY931363       --> TACAAAAGGGTTTATAGCCCAAAAGCTACAATCTCCAAGAGAGCCAACAA  Raphanus sativus var. oleiformis
EV527054       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               601    -    651
UN14704        --> AACACCTTCTTTTGTTCTCTCTTCTCTAGCCAGGAAAAAACTTTAGATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531389       <-- AACACCTTCTTTTGTTCTCTCTTCTCTAGCCAGGAAAAAACTTTAGATCC
EV539725       <-- AACACCTTCTTTTGTTCTCTCTTCTCTAGCCAGG................
EX759533       <-- AACACCTTCTTTTGTTCTCTCTTCTCTAGCCAGGAAAAAACTTTAGATCC
FD538096       <-- AACACCTTCTTTTGTTCTCTCTTCTCTAGCCAGGAAAAAACTTTAGATCC
FD545827       <-- AACACCTTCTTTTGTTCTCTCTTCTCTAGCCAGGAAAAAACTTTAGATCC
EW720622       <-- AACACCTTCTTTTGTTCTCTCTTCTCTAGCCAGGAAAAAACTTTAGATCC
EW719580       <-- AACCCCTTCTTTTGTTCTCTCTTCTCTAGCCAGGAAAAAACTTTAGATCC
EV546253       <-- AACACCTCCTTTTGTTCTCTCTTCTCTAGCCAGGAAAAAACTTTAGATCC
FD565949       <-- AACACCTTCTTTTGTTCTTTCTTCTCTAGCCAGGAAAAAACTTTAGATCC
FD985258       <-- AACACCTTCTTTTGTTCTGTCTTCTCTAGCCAGGAAAAAACTTTAGATCC
EV546656       <-- AACACCTTCTTTTGTTCTCTCTTCTCTAGCCAGGAAAAAACTTTAGATCC
EW729057       <-- AACACCTTCTTTTGTTCTATCTTCTCTAGCGAGGAAAAAACTTTAGATCC
EY927340       <-- AGCACCTTCTTTTGTTCTCTCTTCTCTAGCCAGGAAAAAACTTTAGATCC
FD537499       <-- AACACCTTCTTTTGTTCTCTCTTCTCTAGCCAGGAAAAAACTTTAGATCC
EY896212       <-- AACACCTTCTTTTGTTCTCTCTTCTCTAGCCAGGAAAAAACTTTAGATCC
FD961361       <-- AACACCTTCTTTTGTTCTCTCTTCTCTAGCCAGGAAAAAACTTTAGATCC
FD961191       <-- AACACCTTCTTTTGTTCTCTCTTCTCTAGCCAGGAAAAAACTTTAGATCC
EV534942       --> AACACCTTCTTTTGTTCTCTCTTCTCTAGCCAGGAAAAAACTTTAGATCC
EW723900       --> AACACCTTCTTTTGTTCTATCTTCTCTAGCGAGGAAAAAACTTTAGATCC
FD561918       --> AACACCTTCTTTTGTTCTCTCTTCTCTAGCCAGGAAAAA...........
FD564332       --> AACACCTTCTTTTGTTCT................................
FD965454       --> AACACCTTCTTTTGTTCTCTCTTCTCTAGCCAGGAAAAAACTTTAGATCC
FD965687       --> AACACCTTCTTTTGTTCTCTCTTCTCTAGCCAGGAAAAA-CTTTAGATCC
FD989485       --> AACACCTTCTTTTGTTCTGTCTTCTCTAGCCAGGAAAAA...........
EV551583       --> AACACCTTCTTTTGTTCTCTCTTCTCTAGCCAGGAAAAAACTTTAGATCC
FD541146       --> AACACCTTCTTTTGTTCTCTCTTCTCTAGCCAGGAAAAAACTTTAGATCC
FD541911       --> AACACCTTCTTTTGTTCTCTCTTCTCTAGCCAGGAAAAAACTTTAGATCC
FD549799       --> ..................................................
EW717016       --> AACACCTTCTTTTGTTCTCTCTTCTCTAGCCAGGAAAAA-CTTTAGATCC
EW715934       --> AACACCTTCTTTTGTTCTCTCTTCTCTAGCCAGGAAAAAACTTTAGATCC
FD964396       --> ..................................................
EW714194       --> AACACCTTCTTTTGTTCTCTCTTCTCTAGCCAGGAAAAAACTTTAGATCC
EV551085       --> AACACCTCCTTTTGTTCTCTCTTCTCTAGCCAGGAAAAAACTTTAGATCC
FD562766       --> AACACCTTCTTTTGTTCTCTCTTCTCTAGCCAGGAAAAA-CTTTAGATCC
EY931363       --> AGCACCTTCTTTTGTTCTCTCTTCTCTAGCCAGGAAAAAACTTTAGATCC
EV527054       --> ..................................................

               651    -    701
UN14704        --> GAGAGGAACATTAGTCTTTCTTTTATTTTTATTTTTTAAA-TCCTTTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531389       <-- GAGAGGAACATTAGTCTTTCTTTTATTTTTATTTTTTAAA-TCCTTTTTA  Raphanus raphanistrum subsp. maritimus
EV539725       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759533       <-- GAGAGGAACATTAGTTTTTCTTTTATTTTT-TATTTAAAA-TCCTTTTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538096       <-- GAGAGGAACATTAGTTTTTCTTTTATTTTT-TATTTAAAA-TCCTTTTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545827       <-- GAGAGGAACATTAGTCTTTCTTTTATTTTTATTTTTTAAA-TCCTTTTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720622       <-- GAGAGGAACATTAGTCTTTCTTTTATTTTTATTTTTTAAA-TCCTTTTTA  Raphanus sativus var. oleiformis
EW719580       <-- GAGAGGAACATTAGTCTTTCTTTTATTTTTATTTTTTAAA-TCCTTTTTA  Raphanus sativus var. oleiformis
EV546253       <-- GAGAGGAACATTAGTCTTTCTTTTATTTTTATTTTTTAAA-TCCTTTTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD565949       <-- GAGAGGAACATTAGTCTTTCTTTTATTTTTATTTTTTAAA-TCCTTTTTA  Raphanus sativus var. oleiformis
FD985258       <-- GAGAGGAACATTAGTCTTTCTTTTATTTTTATTTTTTAAA-TCCTTTTTA  Raphanus raphanistrum subsp. landra
EV546656       <-- GAGAGGAACATTAGTCTTTCTTTTATTTTTATTTTTTAAA-TCCTTTTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW729057       <-- GAGAGGAACATTAGTTTTTTTTTTATTTTTTTTATTTAAAATCCTTTTTA  Raphanus sativus cv Early Scarlet Globe
EY927340       <-- GAGAGGAACATTAGTCTTTCTTTTATTTTTATTTTTTAAA-TCCTTTTTA  Raphanus sativus var. oleiformis
FD537499       <-- GAGAGGAACATTAGTTTTTCTTTTATTTTT-TATTTAAAA-TCCTTTTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY896212       <-- GAGAGGAACATTAGTCTTTCTTTTATTTTTATTTTTTAAA-TCCTTTTTA  Raphanus raphanistrum subsp. maritimus
FD961361       <-- GAGAGGAACATTAGTCTTTCTTTTATTTTTATTTTTTAAA-TCCTTTTTA  Raphanus raphanistrum subsp. maritimus
FD961191       <-- GAGAGGAACATTAGTCTTTCTTTTATTTTTATTTTTTAAA-TCCTTTTTA  Raphanus raphanistrum subsp. maritimus
EV534942       --> GAGAGGAACATTAGTCTTTCTTTTATTTATATTTTTTAAA-TCCTTTTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723900       --> GAGAGGAACATTAGTTTTTCTTTTATTTTTTTTATTTAAAATCCTTTTTA  Raphanus sativus cv Early Scarlet Globe
FD561918       --> ..................................................  Raphanus sativus var. oleiformis
FD564332       --> ..................................................  Raphanus sativus var. oleiformis
FD965454       --> GAGAGGAACATTAGTCTTTCTTTTATTTTTATTTTTTAAA-TCCTTTTTA  Raphanus raphanistrum subsp. maritimus
FD965687       --> GAGAGGAACATTAGTCTTTCTTTTATTTTT....................  Raphanus raphanistrum subsp. maritimus
FD989485       --> ..................................................  Raphanus raphanistrum subsp. landra
EV551583       --> GAGAGGAACATTAGTCTTTCTTTTATTTTTATTTTTTAAA-TCCTTTTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541146       --> GAGAGGAACATTAGTTTTTCTTTTATTTTTATTT--AAAA-TCCTTTTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541911       --> GAGAGGAACATTAGTTTTTCTTTTATTTTT-TATTTAAAA-TCCTTTTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549799       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717016       --> GAGAGGAACATTAGTCTTTCTTTTATTTTa....................  Raphanus sativus var. oleiformis
EW715934       --> GAGAGGAACATTAGTCTTTCTTTTATTTTTATTTTTTAAA-TCCTTTTTA  Raphanus sativus var. oleiformis
FD964396       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW714194       --> GAGAGGAACATTAGTCTTTCTTTTATTTTTATTTTTTAAA-TCCTTTTTA  Raphanus sativus var. oleiformis
EV551085       --> GAGAGGAACATTAGTCTTTCTTTTATTTTTATTTTTTAAA-TCCTTTTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD562766       --> GAGAGGAATATTAGTCTTTCTTTTATTTT-ATTTTTTAAA-TCCTTTTTA  Raphanus sativus var. oleiformis
EY931363       --> GAGAGGAACATTAGTCTTTCTTTTATTTTTATTTTTTAAA-TCCTTTTTA  Raphanus sativus var. oleiformis
EV527054       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               701    -    751
UN14704        --> CGATTCACCAAATCGGTTTCAGTAACATAACCAAAAATAAAACATGTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531389       <-- CGATTCACCAAATCGGTTTCAGTAACATAACCAAAAATAAAACATGTTCA  Raphanus raphanistrum subsp. maritimus
EV539725       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759533       <-- CGATTCACCAAATCGGTTCCAGTAACATAACCAAAAATAAAACATGTTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538096       <-- CGATTCGCCAAATCGGTTTCAGTAACATAACCAAAAATAAAACATGTTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD545827       <-- CGATTCACCAAATCGGTTTCAGTAACATAACCAAAAATAAAACATGTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720622       <-- CGATTCACCAAATCGGTTTCAGTAACATGACCAAAAATAAAACATGTTCA  Raphanus sativus var. oleiformis
EW719580       <-- CGATTCACCAAATCGGTTTCAGTAACATGACCAAAAATAAAACATGTTCA  Raphanus sativus var. oleiformis
EV546253       <-- CGATTCACCAAATCGTTTTCAGTAACATAACCAAAAATAAAACATGTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD565949       <-- CGATTCACCAAATCGGTTTCAGTAACATGACCAAAAATAAAACATGTTCA  Raphanus sativus var. oleiformis
FD985258       <-- CGATTCACCAAATCGGTTTCAGTAACATAACCAAAAATAAAACATGTTCA  Raphanus raphanistrum subsp. landra
EV546656       <-- CGATTCACCAAATCGGTTTCAGTAACATAACCAAAAATAAAACATGTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW729057       <-- CGATTCACCAAATCGGTTTCAGTAACATAACCAAAAATAAAACATGTTCA  Raphanus sativus cv Early Scarlet Globe
EY927340       <-- CGATTCACCAAATCGGTTTCAGTAACATGACCAAAAATAAAACATGTTCA  Raphanus sativus var. oleiformis
FD537499       <-- CGATTCACCAAATCGGTTTCAGTAACATAACCAAAAATAAAACATGTTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY896212       <-- CGATTCACCAAATCGGTTTCAGTAACATAACCAAAAATAAAACATGTTCA  Raphanus raphanistrum subsp. maritimus
FD961361       <-- CGGTTCACCAAATCGGTTTCAGTAACATAACCAAAAATAAAACATGTTCA  Raphanus raphanistrum subsp. maritimus
FD961191       <-- CGATTCACCAAATCGGTTTCAGTAACATAACCAAAAATAAAACATGTTCA  Raphanus raphanistrum subsp. maritimus
EV534942       --> CGATTCACCAAATCGGTTTCAGTAACATAACCAAAAATAAAACATGTTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723900       --> CGATTCACCAAA......................................  Raphanus sativus cv Early Scarlet Globe
FD561918       --> ..................................................  Raphanus sativus var. oleiformis
FD564332       --> ..................................................  Raphanus sativus var. oleiformis
FD965454       --> CGATTCACCAAATCGGTT-CAGTAACATAACCAAAA-TAAAACATGTTCA  Raphanus raphanistrum subsp. maritimus
FD965687       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD989485       --> ..................................................  Raphanus raphanistrum subsp. landra
EV551583       --> CGATTCACCAAATCGGTTTCAGTAACATAACCAAAAATAAAACATGTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD541146       --> CGATTCACCAAATCGGTTTCAGTAACATAACCAAAA-TAAAACATGTTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD541911       --> CGATTCGCCAAATCGGTTTCAGTAACATAACCAAAAATAAAACATGTTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549799       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717016       --> ..................................................  Raphanus sativus var. oleiformis
EW715934       --> CGATTCACCAAATCGGTTTCA.............................  Raphanus sativus var. oleiformis
FD964396       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW714194       --> CGATTCACCAAATCGGTTTCAGTAACATGACCAAAAATAAAACATGTTCA  Raphanus sativus var. oleiformis
EV551085       --> CGATTCACCAAATCGTTTTCAGTAACATAACCAAAAATAAAACATGTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD562766       --> CGATTCACCAAATCGGTTTCAGTAACATGACCAAAAA.............  Raphanus sativus var. oleiformis
EY931363       --> CGATTCACCAAATCGGTTTCAGTAACATGACCAAAAATAAAACATGTTCA  Raphanus sativus var. oleiformis
EV527054       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               751    -    801
UN14704        --> CCTTAAATCTTAAGCCTGTAAGAAAGATATTCCCAGTGTCTTAAACGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531389       <-- CCTTAAATCTTAAGCCTGTAAGAAAGATATTCCCAGTGTCTTAAACGTGT
EV539725       <-- ..................................................
EX759533       <-- CCc...............................................
FD538096       <-- CCTTAAATCTTAAGCCTGTAAGAAAGATATTCC-AGTGTCTTAAACGTGT
FD545827       <-- CCg...............................................
EW720622       <-- CCTTAAATCTTAAGCCTGTAAGAAAGATATTCCCAGTGTCTTAAACGTGT
EW719580       <-- CCTTAAATCTTAAGCCGGTAAGAAAGATATTCCCAGTGTCTTAAACGTGT
EV546253       <-- CCTTAAATCTTAAGCCTGTAAGAAAGATATTCCCAGTGTCTTAAACGTGT
FD565949       <-- CCTTAAATCTTAAGCCTGTAAGAAAGATATTCCCAGTGTCTTAAACGTGT
FD985258       <-- CCTTAAATCTTAAGCCTGTAAGAAAGATATTCGCAGTGTCT---TAGTGT
EV546656       <-- CCTTAAATCTTAAGCCTGTAAGAAAGATATTCCCAGTGTCTTAAACGTGT
EW729057       <-- CCTTAAATCTAAAGCCTGTAAGAAAGATATTCC-AGTGTCTTAAACGTGT
EY927340       <-- CCTTAAATCTTAAGCCTGT...............................
FD537499       <-- CCTTAAATCTTAAGCCTGTAAGAAAGATATTCC-AGTGTCTTAAACGTGT
EY896212       <-- CCTTAAATCTTAAGCCTGTAAGAAAGATATTCCCAGTGTCTTAAACGTGT
FD961361       <-- CCTTAAATCTTAAGCCTGTAAGAAAGATATTCCCAGTGTCTTAAACGTGT
FD961191       <-- CCTTAAATCTTAAGCCTGTAAGAAAGATATTCCCAGTGTCTTAAACGTGT
EV534942       --> CCTTAAATCTAAAGCCTGTAAGAAgg........................
EW723900       --> ..................................................
FD561918       --> ..................................................
FD564332       --> ..................................................
FD965454       --> CCTTAAATCTTAAGCCTGTAAGAA-GATATTCCCAGTGTCTTA.......
FD965687       --> ..................................................
FD989485       --> ..................................................
EV551583       --> CCTTAAATCTTAAGCCTGTAAGAAAGATATTCCCAGTGTCTTAAACGTGT
FD541146       --> CCTTAAATCTTAAGCC..................................
FD541911       --> CCTTAAATCTTAAGCCTGTAAGAAAGATATT-TCAGTGTCTTAAACGTtg
FD549799       --> ..................................................
EW717016       --> ..................................................
EW715934       --> ..................................................
FD964396       --> ..................................................
EW714194       --> CCTTAAATCTTAAGCCTGTAAGAA-GATATTCCCAGTGT...........
EV551085       --> CCTTAAATCTTAAGCCTGTAAGAAAGATATTCCCAGTGTCTTAAACGTGT
FD562766       --> ..................................................
EY931363       --> CCTTAAATCTTAAGCCTGT...............................
EV527054       --> ..................................................

               801    -    851
UN14704        --> AGAAAAGTTAAATATTTGTACACCCTTTTTTCGGCCCCTGGCTCTGTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531389       <-- AGAAAAGTTAAATATTTGTACACCCTTTTTTCGGCCt.............
EV539725       <-- ..................................................
EX759533       <-- ..................................................
FD538096       <-- AGAAAAGTTAAATATTTGTACATCCCTTTTTCGGC...............
FD545827       <-- ..................................................
EW720622       <-- AGAAAAGTTAAATATTTGTACACCCTTTTTgttggaactattttttagca
EW719580       <-- AGAAAAGTTAAATATTTGTACACCCTTTTTgttggaactattttttagc.
EV546253       <-- AGAAAAGTTAAATATTTGTACACCC.........................
FD565949       <-- AGAAAA............................................
FD985258       <-- AGAAAAGTTAAATATTTGTACACCCTTTTTTCGGCCTCTGGCTCTGTTTA
EV546656       <-- AGAAAAGTTAAATATTTGTACACCCTTTTTTCGGCCCCTGGCTCTGTTTA
EW729057       <-- AGGAAAGTTAAATATTTGTACACCCcct......................
EY927340       <-- ..................................................
FD537499       <-- AGAAAAGTTAAATATTTGTACATCCCTTTTTCGGCC..............
EY896212       <-- AGAAAAGTTAAATATTTGTACACCCTTTTTTCGGCC..............
FD961361       <-- AGAAAAGTTAAATATTTGTACACCCTTTTTTCGGCCCCTGGCTCTGTTTA
FD961191       <-- AGAAAAGTTAAATATTTGTACACCCTTTTTTCGGCCCCTGGCTCTGTTTA
EV534942       --> ..................................................
EW723900       --> ..................................................
FD561918       --> ..................................................
FD564332       --> ..................................................
FD965454       --> ..................................................
FD965687       --> ..................................................
FD989485       --> ..................................................
EV551583       --> AGAAAAGTTAAATATTTGTACACCCTT.......................
FD541146       --> ..................................................
FD541911       --> ..................................................
FD549799       --> ..................................................
EW717016       --> ..................................................
EW715934       --> ..................................................
FD964396       --> ..................................................
EW714194       --> ..................................................
EV551085       --> AGAAAAGTTAAATATTTGTACACCC.........................
FD562766       --> ..................................................
EY931363       --> ..................................................
EV527054       --> ..................................................

               851    -    901
UN14704        --> GTTGAATGTATCAAAGCTTGTTGTTTCACATAGCAAGAGACAGCTTGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531389       <-- ..................................................
EV539725       <-- ..................................................
EX759533       <-- ..................................................
FD538096       <-- ..................................................
FD545827       <-- ..................................................
EW720622       <-- atgt..............................................
EW719580       <-- ..................................................
EV546253       <-- ..................................................
FD565949       <-- ..................................................
FD985258       <-- GTTGAATGTATCAAAGCTTGTTGCTTC.......................
EV546656       <-- GTTGAATGTATCAAAGCTTGTTGTTTCACATAGCAAGAGACAGCTTGTCC
EW729057       <-- ..................................................
EY927340       <-- ..................................................
FD537499       <-- ..................................................
EY896212       <-- ..................................................
FD961361       <-- GTTGAATGTATCAAAGCTTGTTGTTTCACATAGCAAGAGACAGCTTGTCC
FD961191       <-- GTTGAATGTATCAAAGCTTGTTGTTTCACATAGC................
EV534942       --> ..................................................
EW723900       --> ..................................................
FD561918       --> ..................................................
FD564332       --> ..................................................
FD965454       --> ..................................................
FD965687       --> ..................................................
FD989485       --> ..................................................
EV551583       --> ..................................................
FD541146       --> ..................................................
FD541911       --> ..................................................
FD549799       --> ..................................................
EW717016       --> ..................................................
EW715934       --> ..................................................
FD964396       --> ..................................................
EW714194       --> ..................................................
EV551085       --> ..................................................
FD562766       --> ..................................................
EY931363       --> ..................................................
EV527054       --> ..................................................

               901    -    951
UN14704        --> GTGTTCCATATCGATAACCTGAGAAGGTTTATGTAATGGATCAGACCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531389       <-- ..................................................
EV539725       <-- ..................................................
EX759533       <-- ..................................................
FD538096       <-- ..................................................
FD545827       <-- ..................................................
EW720622       <-- ..................................................
EW719580       <-- ..................................................
EV546253       <-- ..................................................
FD565949       <-- ..................................................
FD985258       <-- ..................................................
EV546656       <-- GTGTTCCATATCGATAACCTGAGAAAGTTTATGTAATGGATCAGACCATT
EW729057       <-- ..................................................
EY927340       <-- ..................................................
FD537499       <-- ..................................................
EY896212       <-- ..................................................
FD961361       <-- GTGTTCCATATCGATAACCTGAGAAGGTTTATGTAATGGATCAGACCATT
FD961191       <-- ..................................................
EV534942       --> ..................................................
EW723900       --> ..................................................
FD561918       --> ..................................................
FD564332       --> ..................................................
FD965454       --> ..................................................
FD965687       --> ..................................................
FD989485       --> ..................................................
EV551583       --> ..................................................
FD541146       --> ..................................................
FD541911       --> ..................................................
FD549799       --> ..................................................
EW717016       --> ..................................................
EW715934       --> ..................................................
FD964396       --> ..................................................
EW714194       --> ..................................................
EV551085       --> ..................................................
FD562766       --> ..................................................
EY931363       --> ..................................................
EV527054       --> ..................................................

               951    -   1001
UN14704        --> GATTGGTATGGCTATGCAACCATTGATTGATACGGCTATGCAAAAAATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531389       <-- ..................................................
EV539725       <-- ..................................................
EX759533       <-- ..................................................
FD538096       <-- ..................................................
FD545827       <-- ..................................................
EW720622       <-- ..................................................
EW719580       <-- ..................................................
EV546253       <-- ..................................................
FD565949       <-- ..................................................
FD985258       <-- ..................................................
EV546656       <-- GATTGc............................................
EW729057       <-- ..................................................
EY927340       <-- ..................................................
FD537499       <-- ..................................................
EY896212       <-- ..................................................
FD961361       <-- GATTGGTATGGCTATGCAACCATTGATTGATACGGCTATGCAAAAAATAA
FD961191       <-- ..................................................
EV534942       --> ..................................................
EW723900       --> ..................................................
FD561918       --> ..................................................
FD564332       --> ..................................................
FD965454       --> ..................................................
FD965687       --> ..................................................
FD989485       --> ..................................................
EV551583       --> ..................................................
FD541146       --> ..................................................
FD541911       --> ..................................................
FD549799       --> ..................................................
EW717016       --> ..................................................
EW715934       --> ..................................................
FD964396       --> ..................................................
EW714194       --> ..................................................
EV551085       --> ..................................................
FD562766       --> ..................................................
EY931363       --> ..................................................
EV527054       --> ..................................................

               1001   -   1051
UN14704        --> AAAGAAAACAGATGAAAACTGTATATGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531389       <-- .............................
EV539725       <-- .............................
EX759533       <-- .............................
FD538096       <-- .............................
FD545827       <-- .............................
EW720622       <-- .............................
EW719580       <-- .............................
EV546253       <-- .............................
FD565949       <-- .............................
FD985258       <-- .............................
EV546656       <-- .............................
EW729057       <-- .............................
EY927340       <-- .............................
FD537499       <-- .............................
EY896212       <-- .............................
FD961361       <-- AAAGAAAACAGATGAAAACTGTATATGGT
FD961191       <-- .............................
EV534942       --> .............................
EW723900       --> .............................
FD561918       --> .............................
FD564332       --> .............................
FD965454       --> .............................
FD965687       --> .............................
FD989485       --> .............................
EV551583       --> .............................
FD541146       --> .............................
FD541911       --> .............................
FD549799       --> .............................
EW717016       --> .............................
EW715934       --> .............................
FD964396       --> .............................
EW714194       --> .............................
EV551085       --> .............................
FD562766       --> .............................
EY931363       --> .............................
EV527054       --> .............................