1      -     51
UN14717        --> GGGCACTTCTTCATTCACATCTAGTATAACAATAGAAGATGAAGAGTCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439883       <-- ..................................................  Raphanus sativus cv GSK3-1
EX759964       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547094       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761064       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW739285       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX758953       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD942695       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY903265       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD937110       <-- ..................................................  Raphanus sativus var. oleiformis
FD968823       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899881       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD937398       <-- ..................................................  Raphanus sativus var. oleiformis
EX770866       --> GGGCACTTCTTCATTCACATCTAGTATAACAATAAAAGATGAAGACTCAC  Raphanus raphanistrum subsp. landra
EX896042       --> ..ggACTTCTTCATTCACATCTAGTATAACAATAAAAGATGAAGAGTCAC  Raphanus sativus cv Early Scarlet Globe
EW734103       --> .........gggacTCACATCTAGTATAACAATAGAAGATGAAGAGTCAC  Raphanus sativus cv Rat-Tail Radish #3870
EX754677       --> .....ggactcgacTCACATCTAGTATAACAATAAAAGATGAAGAGTCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX895862       --> .....ggactcgacTCACATCTAGTATAACAATAGAAGATGAAGAGTCAC  Raphanus sativus cv Early Scarlet Globe
EY907281       --> .........gggacTCACATCTAGTATAACAATAAAAGATGAAGAGTCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD941488       --> .....ggactcgacTCACATCTAGTATAACAATAGAAGATGAAGAGTCAC  Raphanus sativus var. oleiformis
FD941855       --> .....ggactcgacTCACATCTAGTATAACAATAGAAGATGAAGAGTCAC  Raphanus sativus var. oleiformis
EV552116       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY445809       --> ..................................................  Raphanus sativus cv GSK3-1
FD973063       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946599       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX756089       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757486       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY932131       --> ..................................................  Raphanus sativus var. oleiformis

               51     -    101
UN14717        --> TACACAAAGACCGTTTCTTCTGTTGTTCTCTTGTTTTGTCTCTTCATCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439883       <-- ..................................................  Raphanus sativus cv GSK3-1
EX759964       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547094       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761064       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW739285       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX758953       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD942695       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY903265       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD937110       <-- ..................................................  Raphanus sativus var. oleiformis
FD968823       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899881       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD937398       <-- ..................................................  Raphanus sativus var. oleiformis
EX770866       --> TACACAAAGACCGTTTCTTCTGTAGTTCTCTTGTTTTGTCTTTTCATCAC  Raphanus raphanistrum subsp. landra
EX896042       --> TACACAAAGACCGTTTCTTCTGTAGTTCTCTTGTTTTGTCTTTTCATCAC  Raphanus sativus cv Early Scarlet Globe
EW734103       --> TACACAAAGACCGTTTCTTCTATTGTTCTCTTGTCTTGTCTCTTCATCAC  Raphanus sativus cv Rat-Tail Radish #3870
EX754677       --> TACACAAAGACCGTTTCTTCTGTAGTTCTCTTGTTTTGTCTCTTCATCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX895862       --> TACACAAAGACCGTTTCTTCTATTGTTCTCTTGTCTTGTCTCTTCATCAC  Raphanus sativus cv Early Scarlet Globe
EY907281       --> TACACAAAGACCGTTTCTTCTGTAGTTCTCTTGTTTTGTCTCTTCATCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD941488       --> TACACAAAGACCGTTTCTTCTATTGTTCTCTTGTCTTGTCTCTTCATCAC  Raphanus sativus var. oleiformis
FD941855       --> TACACAAAGACCGTTTCTTCTATTGTTCTCTTGTCTTGTCTCTTCATCAC  Raphanus sativus var. oleiformis
EV552116       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY445809       --> ..................................................  Raphanus sativus cv GSK3-1
FD973063       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946599       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX756089       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757486       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY932131       --> ..................................................  Raphanus sativus var. oleiformis

               101    -    151
UN14717        --> GTCTGCCTCTTCAAGTTCCTTCATACGGCAAGTCACTGATGACTTCATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439883       <-- ..................................................
EX759964       <-- ..................................................
EV547094       <-- ..................................................
EX761064       <-- ..................................................
EW739285       <-- ..................................................
EX758953       <-- ..................................................
FD942695       <-- ..................................................
EY903265       <-- ..................................................
FD937110       <-- ..................................................
FD968823       <-- ..................................................
EX899881       <-- ..................................................
FD937398       <-- ..................................................
EX770866       --> GTCTGCCTCTTCAAGTTCCTTCATACGGCAAGTCACTGATGACTTCATCA
EX896042       --> GTCTGCCTCTTCAAGTTC-TTCATACGGCAAGTCACTGATGAGTTCATCA
EW734103       --> GTCTGCCTCTTCAAGTTCCTTCATACGGCAAGTCACTGATGACTTCATCA
EX754677       --> GTCTGCCTCTTCAAGTTCCTTTATACGGCAAGTCACTGATGACTTCATCA
EX895862       --> GTCTGCCTCTTCAAGTTCCTTCATACGGCAAGTCACTGATGACTTCATCA
EY907281       --> GTCTGCCTCTTCAAGTTCCTTCATACGGCAAGTCACTGATGACTTCATCA
FD941488       --> GTCTGCCTCTTCAAGTTCCTTCATACGGCAAGTCACTGATGACTTCATCA
FD941855       --> GTCTGCCTCTTCAAGTTCCTTCATACGGCAAGTCACTGATGACTTCATCA
EV552116       --> ..................................................
FY445809       --> ..................................................
FD973063       --> ..................................................
FD946599       --> ..................................................
EX756089       --> ..................................................
EX757486       --> ..................................................
EY932131       --> ..................................................

               151    -    201
UN14717        --> CAAACTTGCAACATGGTGATGGAGATGGACCAGAACCAATCCGAGGAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439883       <-- ..................................................  Raphanus sativus cv GSK3-1
EX759964       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547094       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761064       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW739285       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX758953       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD942695       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY903265       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD937110       <-- ..................................................  Raphanus sativus var. oleiformis
FD968823       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899881       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD937398       <-- ..................................................  Raphanus sativus var. oleiformis
EX770866       --> CAAACTTGCAACATGGTGATGGAGATGGACCAGACCCAATCCAAGGAGAA  Raphanus raphanistrum subsp. landra
EX896042       --> CAAACTTGCAACATGGTGATGGAGATGGAGCAGACCCCATCCGAGGAGAA  Raphanus sativus cv Early Scarlet Globe
EW734103       --> CAAACTTGCAACATGGTGATGGAGATGGACCAGAACCAATCCGAGGAGAA  Raphanus sativus cv Rat-Tail Radish #3870
EX754677       --> CAAACTTGCAACATGGTAATGGAGATGGACCAGACCCAATCCAAGGAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX895862       --> CAAACTTGCAACATGGTGATGGAGATGGACCAGAACCAATCCGAGGAGAA  Raphanus sativus cv Early Scarlet Globe
EY907281       --> CAAGCTTGCAACATGGTAATGGAGATGGACCAGACCCAATCCAAGGAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD941488       --> CAAACTTGCAACATGGTGATGGAGATGGACCAGAACCAATCCGAGGAGAA  Raphanus sativus var. oleiformis
FD941855       --> CAAACTTGCAACATGGTGATGGAGATGGACCAGAACCAATCCGAGGAGAA  Raphanus sativus var. oleiformis
EV552116       --> ...........................GACCAGAACCAATCCGAGGAGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY445809       --> ..................................................  Raphanus sativus cv GSK3-1
FD973063       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946599       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX756089       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757486       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY932131       --> ..................................................  Raphanus sativus var. oleiformis

               201    -    251
UN14717        --> GCGCACTACTTGCGTAAACATGTTCAAGATGGAGATGGACCAGACCCAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439883       <-- ..................................................
EX759964       <-- ..................................................
EV547094       <-- ..................................................
EX761064       <-- ..................................................
EW739285       <-- ..................................................
EX758953       <-- ..................................................
FD942695       <-- ..................................................
EY903265       <-- ..................................................
FD937110       <-- ..................................................
FD968823       <-- ..................................................
EX899881       <-- ..................................................
FD937398       <-- ..................................................
EX770866       --> GCGCACTACTTGCGTAAACATGTTCAAGATGGAGATGGACCAGACCCAAT
EX896042       --> GCGCACTACTTGCGTAAACATGTTCAAGATGGAGATGGACCAGACCCAAT
EW734103       --> GCGCACTACTTGCGTAAACATGTTCAAGATGGAGATGGACCAGACCCAAT
EX754677       --> GCGCACTACTTGCGTAAACATGTTCAAGATGGAGATGGACCAGACCCAAT
EX895862       --> GCGCACTACTTGCGTAAACATGTTCAAGATGGAGATGGACCAGACCCAAT
EY907281       --> GCGCACTACTTGCGTAAACATGTTCAAGATGGAGATGGACCAGGCCCAAT
FD941488       --> GCGCACTACTTGCGTAAACATGTTCAAGATGGAGATGTACCAGACCCAAT
FD941855       --> GCGCACTACTTGCGTAAACATGTTCAAGATGGAGATGGACCAGACCCAAT
EV552116       --> GCGCACTACTTGCGTAAACATGTTCAAGATGGAGATGGACCAGACCCAAT
FY445809       --> ..................................................
FD973063       --> ..................................................
FD946599       --> ..................................................
EX756089       --> ..................................................
EX757486       --> ..................................................
EY932131       --> ..................................................

               251    -    301
UN14717        --> TCAAGGAGAAGCCCATTACTTACATAACCATGATCAAGAGATCTCATCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439883       <-- ..................................................
EX759964       <-- ..................................................
EV547094       <-- ..................................................
EX761064       <-- ..................................................
EW739285       <-- ..................................................
EX758953       <-- ..................................................
FD942695       <-- ..................................................
EY903265       <-- ..................................................
FD937110       <-- ..................................................
FD968823       <-- ..................................................
EX899881       <-- ..................................................
FD937398       <-- ..................................................
EX770866       --> TCAAGGAGAAGCCCATTACTTACATAACCATGATCAAGAGATCTCATCAC
EX896042       --> TCAAGGAGAAGCCCATTACTTACATAACCATGATCAAGAGATCTCATCAC
EW734103       --> TCAAGGAGAAGCCCATTACTTACATAACCATGATCAAGAGATCTCATCAC
EX754677       --> CCAAGGAGAAGCACATTACTTACATAACCATGATCAAGAGATCTCATCAC
EX895862       --> TCAAGGAGAAGCCCATTACTTACATAACCATGATCAAGAGATCTCATCAC
EY907281       --> CCAAGGAGAAGCACATTACTTACATAACCATGATCAAGAGATCTCATCAC
FD941488       --> TCAAGGAGAAGCCCATTACTTACATAACCATGATCAAGAGATCTCATCAC
FD941855       --> TCAAGGAGAAGCCCATTACTTACATAACCATGATCAAGAGATCTCATCAC
EV552116       --> TCAAGGAGAAGCCCATTACTTACATAACCATGATCAAGAGATCTCATCAC
FY445809       --> ...................TTACATAACCATGATCAAGAGATCTCATCAC
FD973063       --> ..................................................
FD946599       --> ..................................................
EX756089       --> ..................................................
EX757486       --> ..................................................
EY932131       --> ..................................................

               301    -    351
UN14717        --> GTGACTATAAAGTCTCAGCTTCAAACACAGTGAAGGGTCTAAGAAGTCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439883       <-- ..................................................
EX759964       <-- ..................................................
EV547094       <-- ..................................................
EX761064       <-- ..................................................
EW739285       <-- ..................................................
EX758953       <-- ..................................................
FD942695       <-- ..................................................
EY903265       <-- ..................................................
FD937110       <-- ..................................................
FD968823       <-- ..................................................
EX899881       <-- ..................................................
FD937398       <-- ..................................................
EX770866       --> GTGACTATAAAGTCTCAGCTTCAAACACAGTGAAGGGTCTAAGAAGTCGT
EX896042       --> GTGACTATAAAGTCTCAGCTTCAAACACAGTGAAGGGTCTAAGAATTCGT
EW734103       --> GTGACTATAAAGTCTCAGCTTCAAACACAGTGAAGGGTCTAAGAAGTCGT
EX754677       --> GTGACTATAAAGCCTCAGCTTCAAACACAGTGAAGGGTCTAAGAAGTCGT
EX895862       --> GTGACTATAAAGTCTTAGCTTCAAACACAGTGAAGGGTCTAAGAAGTCGT
EY907281       --> GTGACTATAAAGTCTCAGCTTCAAACACAGTGAAGGGTCTAAGAAGTCGT
FD941488       --> GTGACTATAAAGTCTCAGCTTCAAACACAGTGAAGGGTCTAAGAAGTCGT
FD941855       --> GTGACTATAAAGTCTCAGCTTCAAACACAGTGAAGGGTCTAAGAAGTCGT
EV552116       --> GTGACTATAAAGTCTCAGCTTCAAACACAGTGAAGGGTCTAAGAAGTCGT
FY445809       --> GTGACTATAAGGTCTCAGCTTCAAACACAGTGAAGGGTCTAAGAAGTCGT
FD973063       --> ...............................GAAGGGTCTAAGAAGTCGT
FD946599       --> ..................................................
EX756089       --> ..................................................
EX757486       --> ..................................................
EY932131       --> ..................................................

               351    -    401
UN14717        --> CCACCATCTTCTTACTCTCTAAAGATGGAGTCGTTCAACACGCTACTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439883       <-- ..................................................
EX759964       <-- ..................................................
EV547094       <-- ..................................................
EX761064       <-- ..................................................
EW739285       <-- ..................................................
EX758953       <-- ..................................................
FD942695       <-- ..................................................
EY903265       <-- ..................................................
FD937110       <-- ..................................................
FD968823       <-- ..................................................
EX899881       <-- ..................................................
FD937398       <-- ..................................................
EX770866       --> CCACCATCTTCTTACTCTCTAAAGATGGAGTCGTTCAACACGCTACTTAA
EX896042       --> CCACCATCTTCTTACTCTCTAAAGATGGAGTCGTTCAACACGCTACTCAA
EW734103       --> CCACCATCTTCTTACTCTCTAAAGATGGAGTCGTTCAACACGCTACTCAA
EX754677       --> CCACCATCTTCTTACTCTCTAAAGATGGAGTCGTTCAACACGCTACTCAA
EX895862       --> CCACCATCTTCTTACTCTCTAAAGATGGAGTCGTTCAACACGCTACTCAA
EY907281       --> CCACCATCTTCTTACTCTCTAAAGACGGAGTCGTTCAACACGCTACTCAA
FD941488       --> CCACCATCTTCTTACTCTCTAAAGATGGAGTCGTTCAACACGCTACTCAA
FD941855       --> CCACCATCTTCTTACTCTCTAAAGATGGAGTCGTTCAACACGCTACTCAA
EV552116       --> CCACCATCTTCTTACTCTCTAAAGATGGAGTCGTTCAACATGCTACTCAA
FY445809       --> CCACCATCTTCTTACTCTCTAAAGATGGAGTCGTTCAACACGCTACTCAA
FD973063       --> CCACCATCTTCTTACTCTCTAAAGATGGAGTCGTTCAACACGCTACTCAA
FD946599       --> ..................................................
EX756089       --> ..................................................
EX757486       --> ..................................................
EY932131       --> ..................................................

               401    -    451
UN14717        --> GTCAAAATACTCGGAGAGATATGTATCTCGTCCTTTCTCAGCCGCTGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439883       <-- ..................................................
EX759964       <-- ..................................................
EV547094       <-- ..................................................
EX761064       <-- ..................................................
EW739285       <-- ..................................................
EX758953       <-- ..................................................
FD942695       <-- ..................................................
EY903265       <-- ..................................................
FD937110       <-- ..................................................
FD968823       <-- ..................................................
EX899881       <-- ..................................................
FD937398       <-- ..................................................
EX770866       --> GTCAAAATACTCAGAGAGATATGTATCTCGTCCTTTCTCAGCCGCTGGCT
EX896042       --> GTCAAAGTACTCGGAGAGATATGTATCTCGTCCTTTCTCAGCCGCTGGCT
EW734103       --> GTCAAAATACTCGGAGAGATATGTATCTCGTCCTTTCTCAGCCGCTGGCT
EX754677       --> GTCAAAATACTCGGAGAGATATGTATCTCGTCCTTTCTCAGCCGCTGGCT
EX895862       --> GTCAAAATACTCGGAGAGATATGTATCTCGTCCTTTCTCAGCCGCTGGCT
EY907281       --> GTCAAAATACTCGGAGAGATATGTATCTCGTCCTTTCTCAGCCGCTGGCT
FD941488       --> GTCAAAATACTCGGAGAGATATGTATCTCGTCCTTTCTCAGCCGCTGGCT
FD941855       --> GTCAAAATACTCGGAGAGATATGTATCTCGTCCTTTCTCAGCCGCTGGCT
EV552116       --> GTCAAAATACTCGGAGAGATATGTATCTCGTCCTTTCTCAGCCGCTGGCT
FY445809       --> GTCAAAATACTCGGAGAGATATGTATCTCGTCCTTTCTCAGCCGCTGGCT
FD973063       --> GTCAAAATACTCGGAGAGATATGTATCTCGTCCTTTCTCAGCCGCTGGCT
FD946599       --> ............................................gTGGCT
EX756089       --> ..................................................
EX757486       --> ..................................................
EY932131       --> ..................................................

               451    -    501
UN14717        --> ATAACTGGACACTTGTTGTGTATCCGAACGGGAACAAGAATGACAAAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439883       <-- ..................................................  Raphanus sativus cv GSK3-1
EX759964       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547094       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761064       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW739285       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX758953       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD942695       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY903265       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD937110       <-- ..................................................  Raphanus sativus var. oleiformis
FD968823       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899881       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD937398       <-- ..................................................  Raphanus sativus var. oleiformis
EX770866       --> ATAACTGGACACTTGTTGTGTACCCGAACGGGAACAAGAATGACAAAGGT  Raphanus raphanistrum subsp. landra
EX896042       --> ATAACTGGACACTTGTTGTGTACCCGAACGGGAACAAGAATGACAAAGGT  Raphanus sativus cv Early Scarlet Globe
EW734103       --> ATAACTGGACACTTGTTGTGTATCCGAACGGGAACAAGAATGACAAAGGT  Raphanus sativus cv Rat-Tail Radish #3870
EX754677       --> ATAACTGGACACTTGTTGTGTACCCGAACGGGAACAAGAATGACAAAGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX895862       --> ATAACTGGACACTTGTTGTGTATCCGAACGGGAACAAGAATGACAAAGGT  Raphanus sativus cv Early Scarlet Globe
EY907281       --> ATAACTGGACACTTGTTGTGTACCCGAACGGGAACAAGAATGACAAAGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD941488       --> ATAACTGGACACTTGTTGTGTATCCGAACGGGAACAAGAATGACAAAGGT  Raphanus sativus var. oleiformis
FD941855       --> ATAACTGGACACTTGTTGTGTATCCGAACGGGAACAAGAATGAC......  Raphanus sativus var. oleiformis
EV552116       --> ATAACTGGACACTTGTTGTGTATCCGAACGGGAACAAGAATGACAAAGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY445809       --> ATAACTGGACACTTGTTGTGTATCCGAACGGGAACAAGAATGACAAAGGT  Raphanus sativus cv GSK3-1
FD973063       --> ATAACTGGACACTTGTTGTGTACCCGAACGGGAACAAGAATGACAAAGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946599       --> ATAACTGGACACTTGTTGTGTATCCGAACGGGAACAAGAATGACAAAGGT  Raphanus sativus cv Early Scarlet Globe
EX756089       --> gTAACTGGACACTTGTTGTGTACCCGAACGGGAACAAGAATGACAAAGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757486       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY932131       --> ..................................................  Raphanus sativus var. oleiformis

               501    -    551
UN14717        --> GCAGGGTACCTCTCGCTTTACGCAGCCATAGACAACTCCACTCTCGCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439883       <-- ..................................................
EX759964       <-- ..................................................
EV547094       <-- ..................................................
EX761064       <-- ..................................................
EW739285       <-- ..................................................
EX758953       <-- ..................................................
FD942695       <-- ..................................................
EY903265       <-- ..................................................
FD937110       <-- ..................................................
FD968823       <-- ..................................................
EX899881       <-- ..................................................
FD937398       <-- ..................................................
EX770866       --> GCAGGGTACCTCTCGCTTTACGCAGCCATAGACAACTCCACTCTCGCTCC
EX896042       --> GCAGGGTACCTCTCGCTTTACGCAGCCATAGACAACTCCACTCTCGCTCC
EW734103       --> GCAGGGTACCTCTCGCTTTACGCAGCCATAGAAAACTCCACTCTCGCTCC
EX754677       --> GCAGGGTACCTCTCGCTTTACGCAGCCATAGACAACTCCACTCTCGCTCC
EX895862       --> GCAGGGTACCTCTCGCTTTACGCAGCCATAGAAAACTCCACTCTCGCTCC
EY907281       --> GCAGGGTACCTCTCGCTTTACGCAGCCATAGACAACTCCACTCTCGCTCC
FD941488       --> GCAGGGTACCTCTCGCTTTACGCAGCCATAGAAAACTCCACTCT-GCTCC
FD941855       --> ..................................................
EV552116       --> GCAGGGTACCTCTCGCTTTACGCAGCCATAGAAAACTCCACTCTCGCTCC
FY445809       --> GCAGGGTACCTCTCGCTTTACGCAGCCATAGAAAACTCCACTCTCGCTCC
FD973063       --> GCAGGGTACCTCTCGCTTTACGCAGCCATAGACAACTCCACTCTCGCTCC
FD946599       --> GCAGGGTACCTCTCGCTTTACGCAGCCATAGAAACCTCCACTCTCGCTCC
EX756089       --> GCAGGGTCCCTCTCGCTTTACTCAGCCATAGACAACTCCACTCTCGCTCC
EX757486       --> ..gGGGTACCTCTCGCTTTACGCAGCCATAGACAACTCCACTCTCGCTCC
EY932131       --> ..................................................

               551    -    601
UN14717        --> ACATGAAGAGGTTTACGTTGATCTCAGGTTTTACGTCTTCAACAAGAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439883       <-- .......GAGGTTTACGTTGATCTCAGGTTTTACGTCTTCAACAAGAAAC
EX759964       <-- .....................TCTCAGGTTTTACGTCTTCAACAAGAAAC
EV547094       <-- ...............................TACGTCTTCAACAAGAAAC
EX761064       <-- ..................................................
EW739285       <-- ..................................................
EX758953       <-- ..................................................
FD942695       <-- ..................................................
EY903265       <-- ..................................................
FD937110       <-- ..................................................
FD968823       <-- ..................................................
EX899881       <-- ..................................................
FD937398       <-- ..................................................
EX770866       --> ACATGAAGAGGTTTACGTTGATCTCAGGTTTTACGTCTTCAACAAGAAAC
EX896042       --> ACATGAAGAGGTTTACGTGGATCTCAGGTTTTACGTCTTCAACAAGAAAC
EW734103       --> ACATGAAGAGGTTTACGTTGATCTCAGGTTTTACGTCTTCAACAAGAAAC
EX754677       --> ACATGAAGAGGTTTACGTTGATCTCAGGTTTTACGTCTTCAACAAGAAAC
EX895862       --> ACATGAAGAGGTTTACGTTGATC...........................
EY907281       --> ACATGAAGAGGTTTACGTTGATCTCAGGTTTTACGTCTTCAACAAGAAAC
FD941488       --> ACATGAAGAGGTTTACGTTGATCTCAGGTTTTACGTCTTCAACAAGAAAC
FD941855       --> ..................................................
EV552116       --> ACATGAAGAGGTTTACGTTGATCTCAGGTTTTACGTCTTCAACAAGAAAC
FY445809       --> ACATGAAGAGGTTTACGTTGATCTCAGGTTTTACGTCTTCAACAAGAAAC
FD973063       --> ACATGAAGAGGTTTACGTTGATCTCAGGTTTTACGTCTTCAACAAGAAAC
FD946599       --> ACATGAAGAGGTTTACGTTGATCTCAGGTTTTACGTCTTCAACAAGAAAC
EX756089       --> ACATGAAGAGGTTTACGTTGATCTCAGGTTTTACGTCTTCAACAAGAAAC
EX757486       --> ACATGAAGAGGTTTACGTTGATCTCAGGTTTTACGTCTTCAACAAGAAAC
EY932131       --> ..................................................

               601    -    651
UN14717        --> AGAAGAAGTATTTTACCATCCAAGATACCGATGTATGGAGATTTAATATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439883       <-- AGAAGAAGTATTTTACCATCCAAGATACCGATGTATGGAGATTTAATATC  Raphanus sativus cv GSK3-1
EX759964       <-- AGAAGAAGTATTTTACCATCCAAGATACTGATGTATGGAGATTTAATATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547094       <-- AGAATAAGTATTTTACCATCCAAGATACCGATGTATGGAGATTTAATATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761064       <-- ..............ACCATCCAAGATACTGATGTATGGAGATTTAATATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW739285       <-- ................CATCCAAGATACCGATGTATGGAGATTTA-TATC  Raphanus sativus cv Rat-Tail Radish #3870
EX758953       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD942695       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY903265       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD937110       <-- ..................................................  Raphanus sativus var. oleiformis
FD968823       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899881       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD937398       <-- ..................................................  Raphanus sativus var. oleiformis
EX770866       --> AGAAGAAGTATTTTACCATCCAAGATACTGATGTATGGAGATTTAATATC  Raphanus raphanistrum subsp. landra
EX896042       --> AGAAGAAGTATTTTACCATCCAAGATACTGATGTATGGAGATTTAATATC  Raphanus sativus cv Early Scarlet Globe
EW734103       --> AGAATAAGTATTTTACCATCCAAGATACCGATGTATGGAGATTTAATATC  Raphanus sativus cv Rat-Tail Radish #3870
EX754677       --> AGAAGAAGTATTTTACCATCCAAGATACTGATGTATGGAGATTTAATATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX895862       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY907281       --> AGAAGAAGTATTTTACCATCCAAGATACTGATGTATGGAGATTTAATATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD941488       --> AGAATAAGTATTTTACCATCCAAGATACCGATGTATGGAGATTTAATATC  Raphanus sativus var. oleiformis
FD941855       --> ..................................................  Raphanus sativus var. oleiformis
EV552116       --> AGAATAAGTATTTTACCATCCAAGATACCGATGTATGGAGATTTAATATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY445809       --> AGAAGAAGTATTTTACCATCCAAGATACCGATGTATGGAGATTTAATATC  Raphanus sativus cv GSK3-1
FD973063       --> AGAAGAAGTATTTTACCATCCAAGATACCGATGTATGGAGATTTAATATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946599       --> AGAATAAGTATTTTACCATCCAAGATACCGATGTATGGAGATTTAATATC  Raphanus sativus cv Early Scarlet Globe
EX756089       --> AGAAGAAGTATTTTACCATCCAAGATACTGATGTATGGAGATTTAATATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757486       --> AGAAGAAGTATTTTACCATCCAAGATACTGATGTATGGAGATTTAATATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY932131       --> ..................................................  Raphanus sativus var. oleiformis

               651    -    701
UN14717        --> TTCAAAACGATGTGGGGGTTCTCTCAGGTTCTCCCTGGTTATACATTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439883       <-- TTCAAAACGATGTGGGGGTTCTCTCAGGTTCTCCCTGGTTATACATTTAA
EX759964       <-- TTCAAAACGATGTGGGGGTTCTCTCAGGTTCTCCCTGGTTATACATTTAA
EV547094       <-- TTCAAAACGATGTGGGGGTTCTCTCAGGTTCTCCCTGGTTATACATTTAA
EX761064       <-- TTCAAAACGATGTGGGGGTTCTCTCAGGTTCTCCCTGGTTATACATTTAG
EW739285       <-- TTCAAAACGATGTGGGGGT-CTCTCAGGTTCTCCCTGGTTATACATTTAA
EX758953       <-- ......................CTCAGGTTCTCCCTGGTTATACATTTAA
FD942695       <-- ..................................................
EY903265       <-- ..................................................
FD937110       <-- ..................................................
FD968823       <-- ..................................................
EX899881       <-- ..................................................
FD937398       <-- ..................................................
EX770866       --> TTCAAAACGATGTGGGGGTTCTCTCAG-TTCTCCCTGGTTATACATTTAA
EX896042       --> TTCAAA-CGATGTGGGGGTTCTCT..........................
EW734103       --> TTCAAAACGATGTGGGGGTTCTCTCAG-TTCTCCCTGGTTATACATTTAA
EX754677       --> TTCAAAACGATGTGGGGGTTCTCTCAG-TTCTCCCTGGTTATACATTTAA
EX895862       --> ..................................................
EY907281       --> TTCAAA-CGATGTG....................................
FD941488       --> TTCAAAACGATGTGGGGGTTCTCTCAG-TTCTCCCTGGTTATACATTTAA
FD941855       --> ..................................................
EV552116       --> TTCAAAACGATGTGGGGGTTCTCTCAGGTTCTCCCTGGTTATACATTTAA
FY445809       --> TTCAAAACGATGTGGGGGTTCTCTCAGGTTCTCCCTGGTTATACATTTAA
FD973063       --> TTCAAAACGATGTGGGGGTTCTCTCAGGTTCTCCCTGGTTATACATTTAA
FD946599       --> TTCAAAACGATGTGGGGGTTCTCTCAGGTTCTTCCTGGTTATACATTTAA
EX756089       --> TTCAAAACGATGTGGGGGTTCTCTCAGGTTCTCCCTGGTTATACATTTAA
EX757486       --> TTCAAAACGATGTGGGGGTTCTCTCAGGTTCTCCCTGGTTATACATTTAG
EY932131       --> ..................................................

               701    -    751
UN14717        --> AAGTCCGTATAACGGATACCTCTACGATGGAGATCACTGTGAGTTTGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439883       <-- AAGTCCGTATAACGGATACCTCTACGATGGAGATCACTGTGAGTTTGGTG
EX759964       <-- AAGTCCGTATAACGGATACCTCTACGATGGAGATCACTGTGAGTTTGGTG
EV547094       <-- AAGTCCGTATAACGGATACCTCTACGATGGAGATCACTGTGAGTTTGGTG
EX761064       <-- AAGTCCGTATAACGGATACCTCTACGATGGAGATCACTGTGAGTTTGGTG
EW739285       <-- AAGTCCGTATAACGGATACCTCTACGATGGAGATCACTGTGAGTTTGGTG
EX758953       <-- AAGTCCGTATAGCGGATACCTCTACGATGGAGATCACTGTGAGTTTGGTG
FD942695       <-- ..................................................
EY903265       <-- ..................................................
FD937110       <-- ..................................................
FD968823       <-- ..................................................
EX899881       <-- ..................................................
FD937398       <-- ..................................................
EX770866       --> A-GTCCGTATAATGGATACCTCTACGATGGAGA-CACTGTGAGTTTGGTG
EX896042       --> ..................................................
EW734103       --> AAGTCCGTATAACGGATAC-TCTACGATGGAGATCACTGTGAGTTTGGTG
EX754677       --> AAGTCCGTATAGCGGATAC-TCTACGATGGAGATCACTGTGAGTTTGGTG
EX895862       --> ..................................................
EY907281       --> ..................................................
FD941488       --> AAGTCCGTAT........................................
FD941855       --> ..................................................
EV552116       --> AAGTCCGTATAACGGATACCTCTACGATGGAGATCACTGTGAGTTTGGTG
FY445809       --> AAGTCCGTATAACGGATACCTCTACGATGGAGATCACTGTGAGTTTGGTG
FD973063       --> AAGTCCGTATAACGGATACCTCTACGATGGAGATCACTGTGAGTTTGGTG
FD946599       --> AAGTCCGTATAACGGATACCTCTACGATGGAGATCACTGTGAGTTTGGTG
EX756089       --> AAGTCCGTATAACGGATACCTCTACGATGGAGATCACTGTGAGTTTGGTG
EX757486       --> AAGTCCGTATAACGGATACCTCTACGATGGAGATCACTGTGAGTTTGGTG
EY932131       --> ..................................................

               751    -    801
UN14717        --> TTGATGTGACCATACCC-TCTGTCTTTCAAACATCAGAACTTTTTTCAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439883       <-- TTGATGTGACCATACCC-TCTGTCTTTCAAACATCAGAACTTTTTTCAGT
EX759964       <-- TTGATGTGACCATACCC-TCTGTCTTTCAAACATCAGAACTTTTTTCAGT
EV547094       <-- TTGATGTGACCATACCC-TCTGTCTTTCAAACATCAGAACTTTCTTCAGT
EX761064       <-- TTGATGTGACCATACCC-TCTGTCTTTCAAACATCAGAACTTTTTTCAGT
EW739285       <-- TTGATGTGACCATACCC-TCTGTCTTTCAAACATCAGAACTTTTTTCAGT
EX758953       <-- TTGATGTGACCATACCC-TCTGTCTTTCAAACATCAGAACTTTTTTCAGT
FD942695       <-- .......GACCATACCCCTCTGTCTTTCAAACATCAGAACTTTTTTCAGT
EY903265       <-- ..................................................
FD937110       <-- ..................................................
FD968823       <-- ..................................................
EX899881       <-- ..................................................
FD937398       <-- ..................................................
EX770866       --> TTGATGTGAC-ATACCT-TCTGTCTTTCAAACATCAGAACTTTTT-CAGT
EX896042       --> ..................................................
EW734103       --> TTGATGTGAC-ATACCC-TCTGTCTTTCAAcat.................
EX754677       --> TTGATGTGAC-ATACCC-TCT.............................
EX895862       --> ..................................................
EY907281       --> ..................................................
FD941488       --> ..................................................
FD941855       --> ..................................................
EV552116       --> TTGATGTGACCATACCC-TCTGTCTTTCAAACATCAGAACTTTCTTCAGT
FY445809       --> TTGATGTGACCATACCC-TCTGTCTTTCAAACATCAGAACTTTTTTCAGT
FD973063       --> TTGATGTGACCATACCC-TCTGTCTTTCAAACATCAGAACTTTTTTCAGT
FD946599       --> TTGATGTGACCATACCC-TCTGTCTTTCAAACATCAGAACTTTTTTCAGT
EX756089       --> TTGATGTGACCATACCC-TCTGTCTTTCAAACATCAGAACTTTTTTCAGT
EX757486       --> TTGATGTGACCATACCC-TCTGTCTTTCAAACAT................
EY932131       --> ..................................................

               801    -    851
UN14717        --> CACTGGTAACTTCAAAAACCCTACATTCACCTGGACACTTCTGAAGTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439883       <-- CACTGGTAACTTCAAAAACCCTACATTCACCTGGACACTTCTGAAGTTCT
EX759964       <-- CACTGGTAACTTCAAAAACCCTACATTCACCTGGACACTTTTGAAGTTCT
EV547094       <-- CACTGGTAACTTCAAAAACCCTACATTCACCTGGACACTTCTGAAGTTCT
EX761064       <-- CACTGGTAACTTCAAAAACCCTACATTCACCTGGACACTTCTGAAGTTCT
EW739285       <-- CACTGGTAACTTCAAAAACCCTACATTCACCTGGACACTTCTGAAGTTCT
EX758953       <-- CACTGGTAACTTCAAAAACCCTACATTCACCTGGACACTTCTGAAGTTCT
FD942695       <-- CACTGGTAACTTCAAAAACCCTACATTCACCTGGACACTTCTGAAGTTCT
EY903265       <-- ..................................................
FD937110       <-- ..................................................
FD968823       <-- ..................................................
EX899881       <-- ..................................................
FD937398       <-- ..................................................
EX770866       --> CACTGGTA-CTTCAAAA-CCCTACAT-CACCTGGACACTTCaga......
EX896042       --> ..................................................
EW734103       --> ..................................................
EX754677       --> ..................................................
EX895862       --> ..................................................
EY907281       --> ..................................................
FD941488       --> ..................................................
FD941855       --> ..................................................
EV552116       --> CACTGGTAACTTCAAAAACCCTACATTCACCTGGACACTTCTGAAGTTCT
FY445809       --> CACTGGTAACTTCAAAAACCCTACATTCACCTGGACACTTCTGAAGTTCT
FD973063       --> CACTGGTAACTTCAAAAACCCTACATTCACCTGGACACTTCTGAAGTTCT
FD946599       --> CACTGGTAACTTCAAAAACCCTACATTCACCTGGACACTTCTGAAGTTCT
EX756089       --> CACTGGTAACTTCAAAAACCCTACATTCACCTGGACACTTCTGAAGTTCT
EX757486       --> ..................................................
EY932131       --> ..................................................

               851    -    901
UN14717        --> CCACATTGCTCGAAGATACTTACTTCTCTGATGTGTTCTCCATCGGAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439883       <-- CCACATTGCTCGAAGATACTTACTTCTCTGATGTGTTCTCCATCGGAGGA
EX759964       <-- CCACATTGCTCGAAGATACTTACTTCTTTGATGTGTTCTCCATCGGAGGA
EV547094       <-- CCACATTGCTCGAAGATACTTACTTCTCTGATGTGTTCTCCATCGGAGGA
EX761064       <-- CCACATTGCTCGAAGATACTTACTTCTCTGATGTGTTCTCCATCGGAGGA
EW739285       <-- CCACATTGCTCGAAGATACTTACTTCTCTGATGTGTTCTCCATCGGAGGA
EX758953       <-- CCACATTGCTCGAAGATACTTACTTCTCTGATGTGTTCTCCATCGGAGGA
FD942695       <-- CCACATTGCTCGAAGATACTTACTTCTCTGATGTGTTCTCCATCGGAGGA
EY903265       <-- ............................TGATGTGTTCTCCATCGGAGGA
FD937110       <-- .............................GATGTGTTCTCCATCGGAGGA
FD968823       <-- .............................GATGTGTTCTCCATCGGAGGA
EX899881       <-- ...................................TTCTCCATCGGAGGA
FD937398       <-- ..................................................
EX770866       --> ..................................................
EX896042       --> ..................................................
EW734103       --> ..................................................
EX754677       --> ..................................................
EX895862       --> ..................................................
EY907281       --> ..................................................
FD941488       --> ..................................................
FD941855       --> ..................................................
EV552116       --> CCACATTGCTCGAAGATACTTACTTCTCTGATGTGTTCTCCATCGGAGGA
FY445809       --> CCACATTGCTCGAAGATACTTACTTCTCTGATGTGTTCTCCATCGGAGGA
FD973063       --> CCACATTGCTCGAAGATACTTACTTCTCTGATGTGTTCTCCATCGGAGGA
FD946599       --> CCACATTGCTCGAAGATACTTACTTCTCTGATGTGTTCTCCATCGGAGGA
EX756089       --> CCACATTGCTCGAAGATACTTACTTCTCTGATGTGTTCTCCATCGGAGGA
EX757486       --> ..................................................
EY932131       --> ..................................................

               901    -    951
UN14717        --> AGACGTTGGAATATACAAGTGAATCCAAGTGGTCGTGACAAGGGAAAGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439883       <-- AGACGTTGGAATATACAAGTGAATCCAAGTGGTCGTGACAAGGGAAAGGG
EX759964       <-- AGACGTTGGAATATACAAGTGAATCCAAGTGGTCGTGACAAGGGAAAGGG
EV547094       <-- AGACGTTGGAATATACAAGTGAATCCAAGTGGTCGTGACAAGGGAAAGGG
EX761064       <-- AGACGTTGGAATATACAAGTGAATCCAAGTGGTCGTGACAAGGGAAAGGG
EW739285       <-- AGACGTTGGAATATACAAGTGAATCCAAGTGGTCGCGACAAGGGAAAGGG
EX758953       <-- AGACGTTGGAATATACAAGTGAATCCAAGTGGTCGTGACAAGGGAAAGGG
FD942695       <-- AGACGTTGGAATATACAAGTGAATCCAAGTGGTCGTGACAAGGGAAAGGG
EY903265       <-- AGACGTTGGAATATACAAGTGAATCCAAGTGGTCGTGACAAGGGAAAGGG
FD937110       <-- AGACGTTGGAATATACAAGTGAATCCAAGTGGTCGTGACAAGGGAAAGGG
FD968823       <-- AGACGTTGGAATATACAAGTGAATCCAAGTGGTCGTGACAAGGGAAAGGG
EX899881       <-- AGACGTTGGAATATACAAGTGAATCCAAGTGGTCGTGACAAGGGAAAGGG
FD937398       <-- ..................................................
EX770866       --> ..................................................
EX896042       --> ..................................................
EW734103       --> ..................................................
EX754677       --> ..................................................
EX895862       --> ..................................................
EY907281       --> ..................................................
FD941488       --> ..................................................
FD941855       --> ..................................................
EV552116       --> AGACGTTGGAATATACAAGTGAATC.........................
FY445809       --> AGACGTTGGAATATACAAGTGAATCCAAGTGGTCGTGACAAGGGAAAGGG
FD973063       --> AGACGTTGGAATATACAAGTGAATCCAAGTGGTCGTGACAAGGGAAAGGG
FD946599       --> AGACGTTGGAATATACAAGTGAATCCAAGTGGTCGTGACAAGGGAAAGGG
EX756089       --> AGACGTTGGAATATACAAGTGAATCCAAGTGGTCGTGACAAGGGAAAGGG
EX757486       --> ..................................................
EY932131       --> ..................................................

               951    -   1001
UN14717        --> AAAAGCTTTGTCCATGTATCTTATCGTTAATAAGACCGAGGAACTCAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439883       <-- AAAAGCTTTGTCCATGTATCTTATCGTTAATAAGACCGAGGAACTCAGAC  Raphanus sativus cv GSK3-1
EX759964       <-- AAAAGCTTTGTCCATGTATCTTATCGTTAATAAGACCGAGGAACTCAGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547094       <-- AAAAGCTTTGTCCATGTATCTTGTCGTTAATAAGACCGAGGAACTCAGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761064       <-- AAAAGCTTTGTCCATGTATCTTATCGTTAATAAGACCGAGGAACTCAGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW739285       <-- AAAAGCTTTGTCCATGTATCTTGTCGTTAATAAGACCGAGGAACTCAGAC  Raphanus sativus cv Rat-Tail Radish #3870
EX758953       <-- AAAAGCTTTGTCCATGTATCTTATCGTTAATAAGACCGAGGAACTCAGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD942695       <-- AAAAGCTTTGTCCATGTATCTTGTCGTTAATAAGACCGAGGAACTCAGAC  Raphanus sativus cv Early Scarlet Globe
EY903265       <-- AAAAGCTTTGTCCATGTATCTTATCGTTAATAAGACCGAGGAACTCAGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD937110       <-- AAAAGCTTTGTCCATGTATCTTGTCGTTAATAAGACCGAGGAACTCAGAC  Raphanus sativus var. oleiformis
FD968823       <-- AAAAGCTTTGTCCATGTATCTTATCGTTAATAAGGCCGAGGAATTCAGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899881       <-- AAAAGCTTTGTCCATGTATCTTGTCGTTAATAAGACCGAGGAATTCAGAC  Raphanus sativus cv Early Scarlet Globe
FD937398       <-- ..............................................AGAC  Raphanus sativus var. oleiformis
EX770866       --> ..................................................  Raphanus raphanistrum subsp. landra
EX896042       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW734103       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX754677       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX895862       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY907281       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD941488       --> ..................................................  Raphanus sativus var. oleiformis
FD941855       --> ..................................................  Raphanus sativus var. oleiformis
EV552116       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY445809       --> AAAAGCTTTGTCCATGTATCTTATCGTTAATAAGACCGAGGAACTCAGAC  Raphanus sativus cv GSK3-1
FD973063       --> AAAAGCTTTGTCCATGTATCTTATCGTTAATAAGGCCGAGGAACTCAGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946599       --> AAAAGCTTTGTCCATGTATCTTGTCGTTAATAAGACCGAGGAACTCAGAC  Raphanus sativus cv Early Scarlet Globe
EX756089       --> AAAAGCTTTGTCCATGTATCTTATCGTTAATAAGACCGAGGAACTCAGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757486       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY932131       --> ..................................................  Raphanus sativus var. oleiformis

               1001   -   1051
UN14717        --> CCTATGAGAGAATTTATGTTCGAGCCAAGCTTCGAGTTCTTAACAAATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439883       <-- CCTATGAGAGAATTTATGTTCGAGCCAAGCTTCGAGTTCTTAACAAATTC
EX759964       <-- CCTATGAGAGAATTTATGTTCGAGCCAAGCTTCGAGTTCTTAACAAATTC
EV547094       <-- CCTATGAGAGAATTTATGTTCGAGCCAAGCTTCGAGTTCTTAACAAATTC
EX761064       <-- CCTATGAGAGAATTTATGTTCGAGCCAAGCTTCGAGTTCTTAACAAATTC
EW739285       <-- CCTATGAGAGAATTTATGTTCGAGCCAAGCTTCGAGTTCTTAACAAATTC
EX758953       <-- CCTATGAGAGAATTTATGTTCGAGCCAAGCTTCGAGTTCTTAACAAATTC
FD942695       <-- CCTATGAGAGAATTTATGTTCGAGCCAAGCTTCGAGTTCTTAACAAATTC
EY903265       <-- CCTATGAGAGAATTTATGTTCGAGCCAAGCTTCGAGTTCTTAACAAATTC
FD937110       <-- CCTATGAGAGAATTTATGTTCGAGCCAAGCTTCGAGTTCTTAACAAATTC
FD968823       <-- CCTATGAGAGAATTTATGTTCGAGCCAAGCTTCGAGTTCTTAACAAATTC
EX899881       <-- CCTATGAGAGAATTTATGTTCGAGCCAAGCTTCGAGTTTTTAACAAATTC
FD937398       <-- CCTATGAGAGAATTTATGTTCGAGCCAAGCTTGGAGTTCTTAACAAATTC
EX770866       --> ..................................................
EX896042       --> ..................................................
EW734103       --> ..................................................
EX754677       --> ..................................................
EX895862       --> ..................................................
EY907281       --> ..................................................
FD941488       --> ..................................................
FD941855       --> ..................................................
EV552116       --> ..................................................
FY445809       --> CCTATGAGAGAATTTATGTTCGAGCCAAGCTTCGAGTTCTTAACAAATTC
FD973063       --> CCTATGAGAGAATTTATGTTCGAGCCAAGCTTCGAGTTCTTAACAA-TTC
FD946599       --> CCTATGAGAGAATTTATGTTCGAGCCAAGCTTCGAGTTCTTAACAAATTC
EX756089       --> CCTATGAGAGAATTTATGTTCGAGCCAAGCTTCGAGTTCTTAACAAATTC
EX757486       --> ..................................................
EY932131       --> ....gGAGAGAATTTATGTTCGAGCCAAGCTTCGAGTTCTTAACAAATTC

               1051   -   1101
UN14717        --> AAATTCAGAAACGTTGAAAGGCAAATTGATAACTGGTTCAGTCGCTGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439883       <-- AAATTCAGAAACGTTGAAAGGCAAATTGATAACTGGTTCAGTCGCTGGGA
EX759964       <-- AAATTCAGAAACGTTGAAAGGCAAATTGATAACTGGTTCAGTCGCTGGGA
EV547094       <-- AAATTCAGAAACGTTGAAAGGTAAATTGATAACTGGTTCAGTCGCTGGGA
EX761064       <-- AAATTCAGAAACGTTGAAAGGCAAATTGATAACTGGTTCAGTCGCTGGGA
EW739285       <-- AAATTCAGAAACGTTGAAAGGCAAATTGATAACTGGTTCAGTCGCTGGGA
EX758953       <-- AAATTCAGAAACGTTGAAAGGCAAATTGATAACTGGTTCAGTCGCTGGGA
FD942695       <-- AAATTCAGAAACGTTGAAAGGCAAATTGATAACTGGTTCAGTCGCTGGGA
EY903265       <-- AAATTCAGAAACGTTGAAAGGCAAATTGATAACTGGTTCAGTCGCTGGGA
FD937110       <-- AAATTCAGAAACGTTGAAAGGCAAATTGATAACTGGTTCAGTCGCTGGGA
FD968823       <-- AAATTCAGAAACGTTGAAAGGCAAATTGATAACTGGTTCAGTCGCTGGGA
EX899881       <-- AAATTCAGAAACGTTGAAAGGCAAATTGATAACTGGTTCAGTCGCTGGGA
FD937398       <-- AAATTCAGAAACGTTGAAAGGCAAATTGATAACTGGTTCAGTCGCTGGGA
EX770866       --> ..................................................
EX896042       --> ..................................................
EW734103       --> ..................................................
EX754677       --> ..................................................
EX895862       --> ..................................................
EY907281       --> ..................................................
FD941488       --> ..................................................
FD941855       --> ..................................................
EV552116       --> ..................................................
FY445809       --> AAATTCAGAAACGTTGAAAGGCAAATTGATAACTGGTTCAGTCGCTGGGA
FD973063       --> AA................................................
FD946599       --> AAATTCAGAAACGTTGAAAGGCAAATTGATAACTGGTTCAGTCGCTGGGA
EX756089       --> AAATTCAGAAACGTTGAAAGGCAAATTGATAACTGGTTCAGTCGCTGGGA
EX757486       --> ..................................................
EY932131       --> AAATTCAGAAACGTTGAAAGGCAAATTGATAACTGGTTCAGCCGCTGGGA

               1101   -   1151
UN14717        --> AACTGGACGTGCATATGGTTGGGGTTCTAGTGAATTTGTCCCTCTCTCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439883       <-- AACTGGACGTGCATATGGTTGGGGTTCTAGTGAATTTGTCCCTCTCTCTA
EX759964       <-- AACTGGACGTGCATATGGTTGGGGTTCTAGTGAATTTGTCCCTCTCTCTA
EV547094       <-- AACTGGACGTGCATATGGTTGGGGTTCTAGTGAATTTGTCCCTCTCTCTA
EX761064       <-- AACTGGACGTGCATATGGTTGGGGTTCTAGTGAATTTGTCCCTCTCTCTA
EW739285       <-- AACTGGACGTGCATATGGTTGGGGTTCTAGTGAATTTGTCCCTCTCTCTA
EX758953       <-- AACTGGACGTGCATATGGTTGGGGTTCTAGTGAATTTGTCCCTCTCTCTA
FD942695       <-- AACTGGACGTGCATATGGTTGGGGTTCTAGTGAATTTGTCCCTCTCTCTA
EY903265       <-- AACTGGACGTGCATATGGTTGGGGTTCTAGTGAATTTGTCCCTCTCTCTA
FD937110       <-- AACTGGACGTGCATATGGTTGGGGTTCTAGTGAATTTGTCCCTCTCTCTA
FD968823       <-- AACTGGA-GTGCATATGGTTGGGGTTCTAGTGAATTTGTCCCTCTCTCTA
EX899881       <-- AACTGGACGTGCATATGGTTGGGGTTTTAGTGAATTTGTCCCTCTCTCTA
FD937398       <-- AACTGGACGTGCATATGGTTGGGGTTCTAGTGAATTTGTCCCTCTCTCTA
EX770866       --> ..................................................
EX896042       --> ..................................................
EW734103       --> ..................................................
EX754677       --> ..................................................
EX895862       --> ..................................................
EY907281       --> ..................................................
FD941488       --> ..................................................
FD941855       --> ..................................................
EV552116       --> ..................................................
FY445809       --> AACTGGACGTGCATATGGTTGGGGTTCTAGTGAATTTGTCCCTCTCTCTA
FD973063       --> ..................................................
FD946599       --> AACTGGACGTGCAT....................................
EX756089       --> AACTGGACGTGCATATGGTTG.............................
EX757486       --> ..................................................
EY932131       --> AACTGGACGTGCATATGGTTGGGGTTCTAGTGAATTTGTCCCTCTCTCTA

               1151   -   1201
UN14717        --> ATCTCAGAGATTTATCAAAGGGCTTCCTTGTTGATGATAAGTTGACTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439883       <-- ATCTCAGAGATTTATCAAAGGGCTTCCTTGTTGATGATAAGTTGACTGTC
EX759964       <-- ATCTCAGAGATTTATCAAAGGGCTTCCTTGTTGATGATAAGTTGACTGTC
EV547094       <-- ATCTCAGAGATTTATCAAAGGGCTTCCTTGTTGATGATAAGTTGACTTTC
EX761064       <-- ATCTCAGAGATTTATCAAAGGGCTTCCTTGTTGATGATAAGTTGACTGTC
EW739285       <-- ATCTCGGAGATTTATCAAAGGGCTTCCTTGTTGATGATAAGTTGACTGTC
EX758953       <-- ATCTCAGAGATTTATCAAAGGGCTTCCTTGTTGATGATAAGTTGACTGTC
FD942695       <-- ATCTCAGAGATTTATCAAAGGGCTTCCTTGTTGATGATAAGTTGACTGTC
EY903265       <-- ATTTCAGAGATTTATCAAAGGGCTTCCTTGTTGATGATAAGTTGACTGTC
FD937110       <-- ATCTCAGAGATTTATCAAAGGGCTTCCTTGTTGATGATAAGTTGACTGTC
FD968823       <-- ATCTCAGAGATTTATCAAAGGGCTTCCTTGTTGATGATAAGTTGACTGTC
EX899881       <-- ATTTCAGAGATTTATCAAAGGGCTTCCTTGTTGATGATAAGTTGACTGTC
FD937398       <-- ATCTCAGAGATTTATCAAAGGGCTTCCTTGTTGATGATAAGTTGACTGTC
EX770866       --> ..................................................
EX896042       --> ..................................................
EW734103       --> ..................................................
EX754677       --> ..................................................
EX895862       --> ..................................................
EY907281       --> ..................................................
FD941488       --> ..................................................
FD941855       --> ..................................................
EV552116       --> ..................................................
FY445809       --> ATC...............................................
FD973063       --> ..................................................
FD946599       --> ..................................................
EX756089       --> ..................................................
EX757486       --> ..................................................
EY932131       --> ATCTCAGAGATTTATCAAAGGGCTTCCTTGTTGATGATAAGTTGACTGTC

               1201   -   1251
UN14717        --> CAAGTCGAAATTGAAACCGTTTCTAAAACCATGTACTTTCCAAGTTAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439883       <-- CAAGTCGAAATTGAAACCGTTTCTAAAACCATGTACTTTCCAAGTTAGAG
EX759964       <-- CAAGTCGAAATTGAAACCGTTTCTAAAACCATGTACTTTCCAAGTTAGAG
EV547094       <-- CAAGTCGAAATTGAAACCGTTTCTAAAACCATGTACTTTCCAAGTTAGAG
EX761064       <-- CAAGTCGAAATTGAAACCGTTTCTAAAACCATGTACTTTCCAAGTTAGAG
EW739285       <-- CAAGTCGAAATTGAAACCGTTTCTAAAACCATGTACTTTCCAAGTTAGAG
EX758953       <-- CAAGTCGAAATTGAAACCGTTTCTAAAACCATGTACTTTCCAAGTTAGAG
FD942695       <-- CAAGTCGAAATTGAAACCGTTTCTAAAACCATGTACTTTCCAAGTTAGAG
EY903265       <-- CAAGTCGAAATTGAAACCGTTTCTAAAACCATGTACTTTCCAAGTTAGAG
FD937110       <-- CAAGTCGAAATTGAAACCGTTTCTAAAACCATGTACTTTCCAAGTTAGAG
FD968823       <-- CAAGTCGAAATTGAAACCGTTTCTAAAACCATGTACTTTCCAAGTTAGAG
EX899881       <-- CAAGTCGAAATTGAAACCGTTTCTAAAACCATGTACTTTCCAAGTTAGAG
FD937398       <-- CAAGTCGAAATTGAAACCGTTTCTAAAACCATGTACTTTCCAAGTTAGAG
EX770866       --> ..................................................
EX896042       --> ..................................................
EW734103       --> ..................................................
EX754677       --> ..................................................
EX895862       --> ..................................................
EY907281       --> ..................................................
FD941488       --> ..................................................
FD941855       --> ..................................................
EV552116       --> ..................................................
FY445809       --> ..................................................
FD973063       --> ..................................................
FD946599       --> ..................................................
EX756089       --> ..................................................
EX757486       --> ..................................................
EY932131       --> CAAGTCGAAATTGAAACCGTTTCTAAAACCATGTACTTTCCAAGTTAGAG

               1251   -   1301
UN14717        --> TTTCTCTAACCACGTACGGACATGCAACTCAATGTGTTTGCTTTGTTAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439883       <-- TTTCTCTAACCACGTACGGACATGCAACTCCATGTGTTTGCTTTGTTAAC  Raphanus sativus cv GSK3-1
EX759964       <-- TTACTCTAACCACGTACGGACATGCAACTCCATGTGTTTGCTTTGTTAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV547094       <-- TTTCTCTAACCACGTACGGACATGCAACTCAATGTGTTTGCTTTGTTAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX761064       <-- TTACTCTAACCACGTACGGACATGCAACTCCATGTGTTTGCTTTGTTAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW739285       <-- TTTCTCTAACCACGTACGGACATGCAACTCAATGTGTTTGCTTTGTTAAC  Raphanus sativus cv Rat-Tail Radish #3870
EX758953       <-- TTACTCTAACCACGTACGGACATGCAACTCCATGTGTTTGCTTTGTTAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD942695       <-- TTTCTCTAACCACGTACGGACATGCAACTCAATGTGTTTGCTTTGTTAAC  Raphanus sativus cv Early Scarlet Globe
EY903265       <-- TTACTCTAACCACGTACGGACATGCAACTCCATGTGTTTGCTTTGTTAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD937110       <-- TTTCTCTAACCACGTACGGACATGCAACTCAATGTGTTTGCTTTGTTAAC  Raphanus sativus var. oleiformis
FD968823       <-- TTTCTCTAACCACGTACGGACATGCAACTCCATGTGTTTGCTTTGTTAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX899881       <-- TTTCTCTAACCACGTACGGACATGCAACTCAATGTGTTTGCTTTGTTAAC  Raphanus sativus cv Early Scarlet Globe
FD937398       <-- TTTCTCTAACCACGTACGGACATGCAACTCAATGTGTTTGCTTTGTTAAC  Raphanus sativus var. oleiformis
EX770866       --> ..................................................  Raphanus raphanistrum subsp. landra
EX896042       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW734103       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX754677       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX895862       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY907281       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD941488       --> ..................................................  Raphanus sativus var. oleiformis
FD941855       --> ..................................................  Raphanus sativus var. oleiformis
EV552116       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY445809       --> ..................................................  Raphanus sativus cv GSK3-1
FD973063       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD946599       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX756089       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX757486       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY932131       --> TTTCTCTAACCACGTACGGACATGCAACTCAATGTGTTTGCTTTGTTAAC  Raphanus sativus var. oleiformis

               1301   -   1351
UN14717        --> TGTTATCAACCACCTAAGTACTAATAAGTCCGTCTATGTGTTTCAATAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439883       <-- TGTTTTCAACCACCTAAGTACTAATAAGTCCGTCTATGTGTTTCAATAAA
EX759964       <-- TGCTATCAACCCCCTAAGTACTAATAAGTCCGTCTATGTGTTTCAATAAG
EV547094       <-- TGTTATCAACCACCTAAGTACTAATAAGTCCGTCTATGTGTTTCAATAAG
EX761064       <-- TGCTATCAACCACCTAAGTACTAATAAGTCCGTCTATGTGTTTCAATAAG
EW739285       <-- TGTTATCAACCACCTAAGTACTAATAAGTCCGTCTATGTGTTTCAATAAG
EX758953       <-- TGCTATCAACCACCTAAGTACTAATAAGTCCGTCTATGTGTTTCAATAAG
FD942695       <-- TGTTATCAACCACCTAAGTACTAATAAGTCCGTCTATGTGTTTCAATAAG
EY903265       <-- TGCTATCAACCACCTAAGTACTAATAAGTCCGTCTATGTGTTTCAATAAG
FD937110       <-- TGTTATCAACCACCTAAGTACTAATAAGTCCGTCTATGTGTTTCAATAAG
FD968823       <-- TGTTATCAACCACCTAAGTACTAATAAGTCCGTCTATGTGTTTCAATAAG
EX899881       <-- TGTTATCAACCACCTAAGTACTAATAAGTCCGTCTATGTGTTTCAATAAG
FD937398       <-- TGTTATCAACCACCTAAGTACTAATAAGTCCGTCTATGTGTTTCAATAAG
EX770866       --> ..................................................
EX896042       --> ..................................................
EW734103       --> ..................................................
EX754677       --> ..................................................
EX895862       --> ..................................................
EY907281       --> ..................................................
FD941488       --> ..................................................
FD941855       --> ..................................................
EV552116       --> ..................................................
FY445809       --> ..................................................
FD973063       --> ..................................................
FD946599       --> ..................................................
EX756089       --> ..................................................
EX757486       --> ..................................................
EY932131       --> TGTTATCAACCACCTAAGTACTAATAAGTCCGTCTATGTGTTTCAATAAG

               1351   -   1401
UN14717        --> TGAGTTTGTATTAATAAGTACGTGTTTGTGTTACAATAAATGAGTCTGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439883       <-- GGGGTTTGTATTAATAAGTA..............................
EX759964       <-- TGAGTTTGTATTAATAAGTA..............................
EV547094       <-- TGAGTTTGTATTAATAAGTACGTGTTTGTGTTACAATAAATGAGTCTGTA
EX761064       <-- TGAGTTTGTATTAATAAGTACGTGTTTGTGTTACAATAAATGAGTCTGTA
EW739285       <-- TGAGTTTGTATTAATAAGTACGTGTTTGTGTTACAATAAATGAGTCTGTA
EX758953       <-- TGAGTTTGTATTAATAAGTACGTGTTTGTGTTACAATAAATGAGTCTGTA
FD942695       <-- TGAGTTTGTATTAATAAGTACGTGTTTGTGTTACAATAAATGAGTCTGTA
EY903265       <-- TGAGTTTGTATTAATAAGTACGTGTTTGTGTTACAATAAATGAGTCTGTA
FD937110       <-- TGAGTTTGTATTAATAAGTACGTGTTTGTGTTACAATAAATGAGTCTGTA
FD968823       <-- TGAGTTTGTATTAATAAGTACGTGTTTGTGTTACAATAAATGAGTCTGTA
EX899881       <-- TGAGTTTGTATTAATAAGCACGTGTTTGTGTTACAATAAATGAGTCTGTA
FD937398       <-- TGAGTTTGTATTAATAAGTACGTGTTTGTGTTACAATAAATGAGTCTGTA
EX770866       --> ..................................................
EX896042       --> ..................................................
EW734103       --> ..................................................
EX754677       --> ..................................................
EX895862       --> ..................................................
EY907281       --> ..................................................
FD941488       --> ..................................................
FD941855       --> ..................................................
EV552116       --> ..................................................
FY445809       --> ..................................................
FD973063       --> ..................................................
FD946599       --> ..................................................
EX756089       --> ..................................................
EX757486       --> ..................................................
EY932131       --> TGAGTTTGTATTAATAAGTACGTGTTTGTGTTACAATAAATGAGTCTGTA

               1401   -   1451
UN14717        --> TTCTCATCATGCATCTATCAAACATCTCTCGTCTTTTAAGCACCAGGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439883       <-- ..................................................
EX759964       <-- ..................................................
EV547094       <-- TTCTC.............................................
EX761064       <-- TTCTCATC..........................................
EW739285       <-- TTCTCATCATGCATCc..................................
EX758953       <-- TTCTCATCATGCATCTATCAAACATCTCTCGTC.................
FD942695       <-- TTCTCAcc..........................................
EY903265       <-- TTCTC.............................................
FD937110       <-- TTCTCATCATGCATCTATCAAACATCTCTCGTCTTTTAAGC.........
FD968823       <-- TTCTCATCATGCATCTATCAAACATCTCTCGTCTTTTAAGCACCAGGAAG
EX899881       <-- TTCTCATCATGCATCTATCAAACATCCCTCGTCTTTT.............
FD937398       <-- TTCTCATCATGCATCTATCAAACATCTCTCGTCTTTTAAGCACC......
EX770866       --> ..................................................
EX896042       --> ..................................................
EW734103       --> ..................................................
EX754677       --> ..................................................
EX895862       --> ..................................................
EY907281       --> ..................................................
FD941488       --> ..................................................
FD941855       --> ..................................................
EV552116       --> ..................................................
FY445809       --> ..................................................
FD973063       --> ..................................................
FD946599       --> ..................................................
EX756089       --> ..................................................
EX757486       --> ..................................................
EY932131       --> TTCTCATCATGCATCTATCAAACATCTCTCGTCTTTTAAGCACC......

               1451   -   1501
UN14717        --> TTTTAATTTACCGC
                   ~~~~~~~~~~~~~~
FY439883       <-- ..............
EX759964       <-- ..............
EV547094       <-- ..............
EX761064       <-- ..............
EW739285       <-- ..............
EX758953       <-- ..............
FD942695       <-- ..............
EY903265       <-- ..............
FD937110       <-- ..............
FD968823       <-- TTTTAATTTACCGC
EX899881       <-- ..............
FD937398       <-- ..............
EX770866       --> ..............
EX896042       --> ..............
EW734103       --> ..............
EX754677       --> ..............
EX895862       --> ..............
EY907281       --> ..............
FD941488       --> ..............
FD941855       --> ..............
EV552116       --> ..............
FY445809       --> ..............
FD973063       --> ..............
FD946599       --> ..............
EX756089       --> ..............
EX757486       --> ..............
EY932131       --> ..............