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Alignment for radish unigene UN14778

               1      -     51
UN14778        --> GGAATTTAAGATGCGATAGATTTATTAAAGTGCTCCAACATATAATCCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569200       <-- ..................................................
EV570129       <-- ..................................................
FD561544       <-- ..................................................
FD565677       --> GGATTTTAAGACACGATAGATTTATTAAAGTGCTCCAACATATAATCCGA
FY442627       --> GGAATTTAAGATGCGATAGATTTATTAAAGTGCTCCAACATATAATCCGA
EV573786       --> ....................cTTATTAAAGTGCTCCAACATATAATCCGA
FY429067       --> ............................................ATCCGA
FY439107       --> ............................................ATCCGA
FD934889       --> ..................................................
EY894262       --> ..................................................

               51     -    101
UN14778        --> AACTGGATTTAAGAACATAATAATATCCAAGGAAACAAAATTGAAAATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569200       <-- ..................................................
EV570129       <-- ..................................................
FD561544       <-- ..................................................
FD565677       --> AACTGGATT-AAGAACATAATAATATCCAAGGAAACAAAATTGAAAATTC
FY442627       --> AACTGGGTTTAAGAACATAATAATATCCCAGGGAACAAAATTGAAAATTC
EV573786       --> AACTGGATT-AAGAACATAATAATATCCAAGGAAACAAAATTGAAAATTC
FY429067       --> AACTGGATTTAAGAACATAATAATATCCAAGGAACCAAAATTGAAAATTC
FY439107       --> AACTGGATTTAAGAACATAATAATATCCAAGGAAACAAAATTGAAAATTC
FD934889       --> ....cggaTTAAGAACATAATAATATCCAAGGAAACAAAATTGAAAATTC
EY894262       --> ..................................................

               101    -    151
UN14778        --> TAAAACTTCAACGAACAGAAGACGATAACAAAAAAGAAAGAAACAGTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569200       <-- ..................................................
EV570129       <-- ..................................................
FD561544       <-- ..................................................
FD565677       --> TAAAACTTCAACGAACAGAAGACGATAACAAAAAAGAAAGAAACAGTTTG
FY442627       --> TAAAACTTCCACGAACAGAAGACGATAACAAAAAAGAAAGAAACAGTTTG
EV573786       --> TAAAACTTCAACGAACAGAAGACGATAACAAAAAAGAAAGAAACAGTTTG
FY429067       --> TAAAACTTCAACGAACAGAAGACGATAACAAAAAAGAAAGAAACAGTTTG
FY439107       --> TAAAACTTCAACGAACAGAAGACGATAACAAAAAAGAAAGAAACAGTTTG
FD934889       --> TAAAACTTCAACGAACAGAAGACGATAACAAAAAAGAAAGAAACAGTTTG
EY894262       --> ..................................................

               151    -    201
UN14778        --> ATAGATGTCTAAAGAGTGATCCAAAGGACAGGAAAAGGAAAGGAGAATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569200       <-- .TAGATGTCTAA-GAGTGATCCAAAGGACA--GAAA-GAAA-GAG-ATGA
EV570129       <-- ......................AAAGGACAGGAAAAGGAAAGGAGAATGA
FD561544       <-- ..................................................
FD565677       --> ATAGATGTCTAAAGAGTGATCCAAAGGACAGGAAAAGGAAAGGAGAATGA
FY442627       --> ATAGATGTCTAAAGAGTGATCCCAAGGACAGGAAAAGGAAAGGAGAATGA
EV573786       --> ATAGATGTCTAAAGAGTGATCCAAAGGACAGGAAAAGGAAAGGAGAATGA
FY429067       --> ATAGATGTCTAAAGAGTGATCCAAAGGACAGGAAAAGGAAAGGAGAATGA
FY439107       --> ATAGATGTCTAAAGAGTGATCCAAAGGACAGGAAAAGGAAAGGAGAATGA
FD934889       --> ATAGATGTCTAAAGAGTGATCCAAAGGACAGGAAAAGGAAAGGAGAATGA
EY894262       --> ...............................................TGA

               201    -    251
UN14778        --> CACTTATTGAAGTGGGGAGGAAACTTGCATTCATTCTTGGACGACTTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569200       <-- CACTTATTGAAGTGGGGAGGAAACTTGCATTCAT-CTTGGACGACTTCTT
EV570129       <-- CACTTATTGAAGTGGGGAGGAAACTTGCATTCATTCTTGGACGACTTCTT
FD561544       <-- ..................................................
FD565677       --> CACTTATTGAAGTGGGGAGGAAACTTGCATTCATTCTTGGACGACTTCTT
FY442627       --> CACTTATTGAAGTGGGGAGGAAACTTGCATTCATTCTTGGACGACTTCTT
EV573786       --> CACTTATTGAAGTGGGGAGGAAACTTGCATTCATTCTTGGACGACTTCTT
FY429067       --> CACTTATTGAAGTGGGGAGGAAACTTGCATTCATTCTTGGACGACTTCTT
FY439107       --> CACTTATTGAAGTGGGGAGGAAACTTGCATTCATTCTTGGACGACTTCTT
FD934889       --> CACTTATTGAAGTGGGGAGGAAACTTGCATTCATTCTTGGACGACTTCTT
EY894262       --> CTCTTATTGAAGTGGGGAGGAAACTTGCATTCATTCTTGGACGACTTCTT

               251    -    301
UN14778        --> CAGTGACGTCAATAACATCCTCAAACTCAACTTCTTTGACTTCTTTGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569200       <-- CAGTGACGTCAATAACA-CCTCAAACTCAACTTCTTTGACTTCTTTGGCT
EV570129       <-- CAGTGACGTCAATAACATCCTCAAACTCAACTTCTTTGACTTCTTTGGCT
FD561544       <-- ..................................................
FD565677       --> CAGTGACGTCAATAACATCCTCAAACTCAACTTCTTTGACTTCTTTGGCT
FY442627       --> CAGTGACGTCAATAACATCCTCAAACTCAACTTCTTTGACTTCTTTGGGT
EV573786       --> CAGTGACGTCAATAACATCCTCAAACTCAACTTCTTTGACTTCTTTGGCT
FY429067       --> CAGTGACGTCAATAACATCCTCAAACTCAACTTCTTTGACTTCTTTGGCT
FY439107       --> CAGTGACGTCAATAACATCCTCAAACTCAACTTCTTTGACTTCTTTGGCT
FD934889       --> CAGTGACGTCAATAACATCCTCAAACTCAACTTCTTTGACTTCTTTGGCT
EY894262       --> CAGTGACGTCAATAACATCCTCAAACTCAACTTCTTTGACTTCTTTGGCT

               301    -    351
UN14778        --> TCATCCTCTTCTTCTTCCTCATCACTGATTTCTCCATCCCTGAGGTTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569200       <-- TCATCCTCTTCTTCTTCCTCATCACTGATTTCTCCATCCCTGAGGTTTTG
EV570129       <-- TCATCCTCTTCTTCTTCCTCATCACTGATTTCTCCATCCTTGAGGTTTTG
FD561544       <-- ..................................................
FD565677       --> TCATCCTCTTCTTCTTCCTCGTCACTGATTTCTCCATCCCTGAGGTTTTG
FY442627       --> TCATCCTCTTCTTCTTCCTCATCACTGATTTCTCCATCCCTGAGGTTTTG
EV573786       --> TCATCCTCTTCTTCTTCCTCATCACTGATTTCTCCATCCCTGAGGTTTTG
FY429067       --> TCATCCTCTTCTTCTTCCTCATCACTGATTTCTCCATCCCTGAGGTTTTG
FY439107       --> TCATCCTCTTCTTCTTCCTCATCACTGATTTCTCCATCCCTGAGGTTTTG
FD934889       --> TCATCCTCTTCTTCTTCCTCATCACTGATTTCTCCATCCCTGAGGTTTTG
EY894262       --> TCATCCTCTTCTTCTTCCTCATCACTGATTTCTCCATCCCTGAGGTTTTG

               351    -    401
UN14778        --> CCTCGCAAGTTTCTCCTCTTCCTGCAGCGACTTCCACTGCTTCACCCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569200       <-- CCTCGCAAGTTTCTCCTCTTC-TGCAGCGACTTCCACTGCATCACCCATT
EV570129       <-- CCTCGCAAGTTTCTCCTCTTCCTGCAGCGACTTCCACTGCTTCACCCATT
FD561544       <-- ..................................................
FD565677       --> CCTCGCAAGTTTCTCCTCTTCCTGCAGCGACTTCCACTGCTTCACCCATT
FY442627       --> CCTCGCAAGTTTCTCCTCTTCCTGGAGCGACTTCCACTGGTTCACCCATT
EV573786       --> CCTCGCAAGTTTCTCCTCTTCCTGCAGCGACTTCCACTGCATCACCCATT
FY429067       --> CCTCGCAAGTTTCTCCTCTTCCTGCAGCGACTTCCACTGCTTCACCCATT
FY439107       --> CCTCGCAAGTTTCTCCTCTTCCTGCAGCGACTTCCACTGCTTCACCCATT
FD934889       --> CCTCGCAAGTTTCTCCTCTTCCTGCAGCGACTTCCACTGCTTCACCCATT
EY894262       --> CCTCGCAAGTTTCTCCCCTTCCTGCAGCGACTTCCACTGCTTCACCCATT

               401    -    451
UN14778        --> TCTCCCACTCTTCCTTCAACGCCTTCCTCTTCTCCCTGTCTTGTTCACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569200       <-- TCTCCCACTCTTCCTTCAACGCCTTCCTCTTCTCCCTGTCTTGTTCACTC
EV570129       <-- TCTCCCACTCTTCCTTCAACGCCTTCCTCTTCTCCCTGTCTTGTTCACTC
FD561544       <-- .............................TTCTCC-TGTCTTGTTCACTC
FD565677       --> TCTCCCACTCTTCCTTCAACGCCTTCCTCTTCTCCCTGTCTTGTTCACTC
FY442627       --> TCTCCCACTCTTCCTTCAACGCCTTCCTCTTCTCCCTGGCTTGGTCACTC
EV573786       --> TCTCCCACTCTTCCTTCAACGCCTTCCTCTTCTCCCTGTCTTGTTCACTC
FY429067       --> TCTCCCACTCTTCCTTCAACGCCTTCCTCTTCTCCCTGTCTTGTTCACTC
FY439107       --> TCTCCCACTCTTCCTTCAACGCCTTCCTCTTCTCCCTGTCTTGTTCACTC
FD934889       --> TCTCCCACTCTTCCTTCAACGCCTTCCTCTTCTCCCTGTCTTGTTCACTC
EY894262       --> TCTCCCACTCTTCCTTCAACGCCTTCCTCTTCTCCCTGTCTTGTTCACTC

               451    -    501
UN14778        --> AAGAGCAACGACACGTCCTGATCCTCTAACTCGTACTTCTTGCTGTACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569200       <-- AACAGCAACGACACGTCCTGATCCTCCAACTCGTACTTCTTGCTGTACTT
EV570129       <-- AACAGCAACGACACGTCCTGAGCCTCCAACTCGTACTTCTTGCTGTACTT
FD561544       <-- AAGAGCAACGACACGTC-TGATCCTCTAACTCGTACTTCTTGCTGTACTT
FD565677       --> AAGAGCAACGACACGTCCTGATCCTCTAACTCGTACTTCTTGCTGTACTT
FY442627       --> AAGAGCAACGACACGTCCTGATCCTCTAACTCGTACTTCTTGCTGTACTT
EV573786       --> AACAGCAACGACACGTCCTGATCCTCCAACTCGTACTTCTTGCTGTACTT
FY429067       --> AAGAGCAACGACACGTCCTGATCCTCTAACTCGTACTTCTTGCTGTACTT
FY439107       --> AAGAGCAACGACACGTCCTGATCCTCTAACTCGTACTTCTTGCTGTACTT
FD934889       --> AAGAGCAACGACACGTCCTGATCCTCTAACTCGTACTTCTTGCTGTACTT
EY894262       --> AAGAGCAACGACACGTCCTGATCCTCTAACTCGTACTTCTTGCTGTACTT

               501    -    551
UN14778        --> CTTCAGGTTCTTTGCTATCTCTTCTTCCTTCTCTGGAGACAAGAATGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569200       <-- CTTCAGGTTCTTTGCGATCTCTTCTTCCTTCTCCGGAGACAAGAATGATG  Raphanus raphanistrum subsp. landra
EV570129       <-- CTTCAGGTTCTTTGCGATCTCTTCTTCCTTCTCCGGAGACAAGAATGATG  Raphanus raphanistrum subsp. landra
FD561544       <-- CTTCAGGTTCTTTGCTATCTCTTCTTCCTTCTCTGGAGACAAGAATGATG  Raphanus sativus var. oleiformis
FD565677       --> CTTCAGGTTCTTTGCTATCTCTTCTTCCTTCTCTGGAGACAAGAATGATG  Raphanus sativus var. oleiformis
FY442627       --> CTTCAGGGTCTTTGCTATCTCTTCTTCCTTCTCTGGAGACAAGAATGATG  Raphanus sativus cv GSK3-1
EV573786       --> CTTCAGGTTCTTTGCGATCTCTTCTTCCTTCTCCGGAGACAAGAATGATG  Raphanus raphanistrum subsp. landra
FY429067       --> CTTCAGGTTCTTTGCTATCTCTTCTTCCTTCTCTGGAGACAAGAATGATG  Raphanus sativus cv GSK3-1
FY439107       --> CTTCAGGTTCTTTGCTATCTCTTCTTCCTTCTCTGGAGACAAGAATGATG  Raphanus sativus cv GSK3-1
FD934889       --> CTTCAGGTTCTTTGCTATCTCTTCTTCCCTCTCTGGAGACAAGAATGATG  Raphanus sativus var. oleiformis
EY894262       --> CTTCAGGTTCTTTGCGATCTCTTCTTCCTTCTCTGGAGAC..........  Raphanus raphanistrum subsp. maritimus

               551    -    601
UN14778        --> GAGGTCTTGGGCGCCATGCCAACTGGAAGAAATGATCCTTCAGATTCCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569200       <-- GAGGTCTTGGGCGCCATGCCAACTGGAAGAAATGATCCTTCAGATTCCGG
EV570129       <-- GAGGTCTTGGGCGCCATGCCAACTGGAAGAAATGATCCTTCAGATTCCGG
FD561544       <-- GAGGTCTTGGGCGCCATGCCAACTGGAAGAAATGATCCTTCAGATTCCGG
FD565677       --> GAGGTCTTGGGCGCCATGCCAACTGGAAGAAATGATCCTTCAGATTCCGG
FY442627       --> GAGGTCTTGGGCGCCATGCCAACTGGAAGAAATGATCCTTCAGATTCCGG
EV573786       --> GAGGTCTTGGGCGCCATGCCAACTGGAAGAAATGATCCTTCAGATTCCGG
FY429067       --> GAGGTCTTGGGCGCCATGCCAACTGGAAGAAATGATCCTTCAGATTCCGG
FY439107       --> GAGGTCTTGGGCGCCATGCCAACTGGAAGAAATGATCCTTCAGATTCCGG
FD934889       --> GAGGTCTTGGGCGCCATGCCAACTGGAAGAAATGATCCTT..........
EY894262       --> ..................................................

               601    -    651
UN14778        --> TAAAGCAATTTTCCATTGAACGACCAGATGGTGAATCCATTCTCCATCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569200       <-- TAAAGCAATTTTCCATTGAACGACCAGATGGTGAACCCATTCTCCATCTC  Raphanus raphanistrum subsp. landra
EV570129       <-- TAAAGCAATTTTCCATTGAACGACCAGATGGTGAACCCATTCTCCATCTC  Raphanus raphanistrum subsp. landra
FD561544       <-- TAAAGCAATTTTCCATTGAACGACCAGATGGTGAATCCATTCTCCATCTC  Raphanus sativus var. oleiformis
FD565677       --> TAAAGCAATTTTCCATTGAACGACCAGATGGTGAATCCATTCTCCATCTC  Raphanus sativus var. oleiformis
FY442627       --> TAAAGCAATTTTCCATTGAACGACCAGATGGTGAATCCATTCTCCATCTC  Raphanus sativus cv GSK3-1
EV573786       --> TAAAGCAATTTTCCATTGAACGACCAGATGGTGAACCCATTCTCCATCTC  Raphanus raphanistrum subsp. landra
FY429067       --> TAAAGCAATTTTCCATTGAACGACCAGATGGTGAATCCATTCTCCATCTC  Raphanus sativus cv GSK3-1
FY439107       --> TAAAGCAATTTTCCATTGAACGACCAGATGGTGAATCCATTCTCCATCTC  Raphanus sativus cv GSK3-1
FD934889       --> ..................................................  Raphanus sativus var. oleiformis
EY894262       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               651    -    701
UN14778        --> ATGGACTGACGTCACTGCTGTTGCAACATACCTTCCAGTTGGGTCCCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569200       <-- ATGGACTGACGTCACTGCTGTCGCAACGTACCTTCCAGTTGGGTCCCATT  Raphanus raphanistrum subsp. landra
EV570129       <-- ATGGACTGACGTCACTGCTGTTGCAACGAACCTTCCAGTTGGGTCCCATT  Raphanus raphanistrum subsp. landra
FD561544       <-- ATGGACTGACGTCACTGCTGTTGCAACATACCTTCCAGTTGGGTCCCATT  Raphanus sativus var. oleiformis
FD565677       --> ATGGACTGACGTCACTGCTGTTGCAACATACCTTCCAGTTGGGTCCCATT  Raphanus sativus var. oleiformis
FY442627       --> ATGGACTGACGTCACTGCTGTTGCAACATACCTTCCAGTTGGGTCCCATT  Raphanus sativus cv GSK3-1
EV573786       --> ATGGACTGACGTCACTGCTGTCGCAACGTACCTTCCAGTTGGGTCCCATT  Raphanus raphanistrum subsp. landra
FY429067       --> ATGGACTGACGTCACTGCTGTTGCAACATACCTTCCAGTTGGGTCCCATT  Raphanus sativus cv GSK3-1
FY439107       --> ATGGACTGACGTCACTGCTGTTGCAACATACCTTCCAGTTGGGTCCCATT  Raphanus sativus cv GSK3-1
FD934889       --> ..................................................  Raphanus sativus var. oleiformis
EY894262       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               701    -    751
UN14778        --> CGATATCAGTGGCCATGAAGTGTTCAGTTGTGGCCATCGTCTCGAGCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569200       <-- CGATATCAGTGGCCATGAAGTGTTCAGTTGTGGCCATCGTCTCGAGCTCA
EV570129       <-- CGATATCAGTGGCCATGAAGTGTTCAGTTGTGGCCATCGTCTCGAGCTCA
FD561544       <-- CGATATCAGTGGCCATGAAGTGTTCAGTTGTGGCCATCGTCTCGAGCTCA
FD565677       --> CGATATCAGTGGCCATGAAGTGT...........................
FY442627       --> CGATATCAGTGGCCATGAAGTGTTCAGTTGTGGCCATCGTCTCGAGCTCA
EV573786       --> CGATATCAGTGGCCATGAAGTGTTCAGTTGTGGCCATCGTCTCGAGCTCA
FY429067       --> CGATATCAGTGGCCATGAAGTGTTCAGTTGTGGCCATCGTCTCGAGCTCA
FY439107       --> CGATATCAGTGGCCATGAAGTGTTCAGTTGTGGCCATCGTCTCGAGCTCA
FD934889       --> ..................................................
EY894262       --> ..................................................

               751    -    801
UN14778        --> TCCACGTTGAAAAATTCAAGCTGGCCGTTGAAGTTCTTCAACCCAGCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569200       <-- TCCACGTTGAAAAATTCAAGCTGGCCGTTGAAGTTCTTCAACCCAGCAAG  Raphanus raphanistrum subsp. landra
EV570129       <-- TCCACGTTGAAAAATTCAAGCTGGCCGTTGAAGTTCTTCAACCCAGCAAG  Raphanus raphanistrum subsp. landra
FD561544       <-- TCCACGTTGAAAAACTCAAGCTGGCCGTTGAAATTCTTCAACCCAGCAAG  Raphanus sativus var. oleiformis
FD565677       --> ..................................................  Raphanus sativus var. oleiformis
FY442627       --> TCCACGTTG.........................................  Raphanus sativus cv GSK3-1
EV573786       --> TCCACGTTGAAAAATTCAAGCTGGCCGTTGAAGTTCTTCAACCCAGCAAG  Raphanus raphanistrum subsp. landra
FY429067       --> TCCACGTTGAAAAACTCAAGCTGGCCGTTGAAATTCTTCAACCCAGCAAG  Raphanus sativus cv GSK3-1
FY439107       --> TCCACGTTGAAAAACTCAAGCTGGCCGTTGAAATTCTTCAACCCAGCAAG  Raphanus sativus cv GSK3-1
FD934889       --> ..................................................  Raphanus sativus var. oleiformis
EY894262       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               801    -    851
UN14778        --> AATAATGTACTTGCCTGTGGGAGACCAGAAGAGGGCATTGGCTTGTTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569200       <-- AATAATGTACTTGCCTGTGGGAGACCAGAAGAGGGCATTGGCTTGTTTGG
EV570129       <-- AATAATGTACTTGCCTGTGGGAGACCAGAAGAGGGCATTGGCTTGTTTGG
FD561544       <-- AATAATGTACTTGCCTGTGGGAGACCAGAAGAGGGCATTGGCTTGTTTGG
FD565677       --> ..................................................
FY442627       --> ..................................................
EV573786       --> AATAATGTACTTGCCTGTGGGAGACCAGAAGAGGGCATTGGCTTGTTTGG
FY429067       --> AATAATGTACTTGCCTGTGGGAGACCAGAAGAGGGCATTGGCTTGTTTGG
FY439107       --> AATAATGTACTTGCCTGTGGGAGACCAGAAGAGGGCATTGGCTTGTTTGG
FD934889       --> ..................................................
EY894262       --> ..................................................

               851    -    901
UN14778        --> CTTTCAAAGTACCGAGCTTTGTAACCCTTCCACCGTGTTGCGTGGTCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569200       <-- CCTTCAAAGTACCGAGCTTTGTAACCCTTCCACCGTGTTGCGTGGTCTTC  Raphanus raphanistrum subsp. landra
EV570129       <-- CCTTCAAAGTACCGAGCTTTGTAACCCTTCCACCGTGTTGCGTGGTCTTC  Raphanus raphanistrum subsp. landra
FD561544       <-- CTTTCAAAGTACCGAGCTTCGTAACCCTTCCACCGTGTTGCGTGGTCTTC  Raphanus sativus var. oleiformis
FD565677       --> ..................................................  Raphanus sativus var. oleiformis
FY442627       --> ..................................................  Raphanus sativus cv GSK3-1
EV573786       --> CCTTCAAAGTACCGAGCTTTGTAACCCTTCCACCGTGTTGCGTGGTCTTC  Raphanus raphanistrum subsp. landra
FY429067       --> CTTTCAAAGTACCGAGCTTCGTAACCCTTC....................  Raphanus sativus cv GSK3-1
FY439107       --> CTTTCAAAGTACCGAGCTT...............................  Raphanus sativus cv GSK3-1
FD934889       --> ..................................................  Raphanus sativus var. oleiformis
EY894262       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               901    -    951
UN14778        --> ATCGTGTAGAAACTCACATCTGGTCTTGGTTGGTCACCGTGAATCACAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569200       <-- ATCATGTAGAAACTCACATCTGGTCTTGGTTGGTCACCATGAATCACAGC
EV570129       <-- ATCGTGT...........................................
FD561544       <-- ATCGTGTAGAAACTCACATCTGGTCTTGGTTGGTCACCGTGAATCACAGC
FD565677       --> ..................................................
FY442627       --> ..................................................
EV573786       --> ..................................................
FY429067       --> ..................................................
FY439107       --> ..................................................
FD934889       --> ..................................................
EY894262       --> ..................................................

               951    -   1001
UN14778        --> AAACCTGTGACCCTTGGGCTCCCACGCGAAAGCGATGATCTTGTCGTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569200       <-- AAACCTGTGACCCTTGGGCTCCCAAGCGAAAGCGATGATCTTGTCGTTCT
EV570129       <-- ..................................................
FD561544       <-- AAACCTGTGACCCTTGGGCTCCCACGCGAAAGCGATGATCTTGTCGTTCT
FD565677       --> ..................................................
FY442627       --> ..................................................
EV573786       --> ..................................................
FY429067       --> ..................................................
FY439107       --> ..................................................
FD934889       --> ..................................................
EY894262       --> ..................................................

               1001   -   1051
UN14778        --> TGTTGTCCAGCTCGAGAACCTCGATGGGAATATCCCTCTCTTTGATACGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569200       <-- TGTTGTCCAGCTCGAGAACCTCGATGGGAATATCCCTCTCTTTc......
EV570129       <-- ..................................................
FD561544       <-- TGTTGTCCAGCTCGAGAACCTCGATGGGAATATCCCTCTCTTTGATACGG
FD565677       --> ..................................................
FY442627       --> ..................................................
EV573786       --> ..................................................
FY429067       --> ..................................................
FY439107       --> ..................................................
FD934889       --> ..................................................
EY894262       --> ..................................................

               1051   -   1101
UN14778        --> AAGAGCCCGAAGCCAGAGTACGTGCTCTTCTTCGTCTTTGTGTAACGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569200       <-- ..................................................
EV570129       <-- ..................................................
FD561544       <-- AAGAGCCCGAAGCCAGAGTACGTGCTCTTCTTCGTCTTTGTGTAACGGTC
FD565677       --> ..................................................
FY442627       --> ..................................................
EV573786       --> ..................................................
FY429067       --> ..................................................
FY439107       --> ..................................................
FD934889       --> ..................................................
EY894262       --> ..................................................

               1101   -   1151
UN14778        --> AACCTTGACGGCGAGATACTCTCCACTACTCTGCCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV569200       <-- ......................................
EV570129       <-- ......................................
FD561544       <-- AACCTTGACGGCGAGATACTCTCCACTACTCTGCCAGC
FD565677       --> ......................................
FY442627       --> ......................................
EV573786       --> ......................................
FY429067       --> ......................................
FY439107       --> ......................................
FD934889       --> ......................................
EY894262       --> ......................................