Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN15291

               1      -     51
UN15291        --> ATACTTAATTATTTTTAGAAGTAATGTCATCTTCACAACAACAACAACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916652       <-- ..................................................
EW717490       <-- ..................................................
FD563786       <-- ..................................................
FD979386       <-- ..................................................
FY451425       --> ATACTTAATTATTTTTAGAAGTAATGTCATCTTCACAACAACAACAACAA
FD975429       --> ..................................................
EW739532       --> ..................................................
FD567439       --> ..................................................

               51     -    101
UN15291        --> CTAAGCAAGGAGGAAATAGTGTAAGTAAACAAAACAGAAGAAACAATCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916652       <-- ..................................................
EW717490       <-- ..................................................
FD563786       <-- ..................................................
FD979386       <-- ..................................................
FY451425       --> CTAAGCAAGGAGGAAATAGTGTAAGTAAACAAAACAGAAGAAACAATCGG
FD975429       --> ..................................................
EW739532       --> ..................................................
FD567439       --> ..................................................

               101    -    151
UN15291        --> GGAAAACAAAAAAGAAGAAAAAAATAGACTTAAAATTATAAAGTCTTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916652       <-- ..................................................
EW717490       <-- ..................................................
FD563786       <-- ..................................................
FD979386       <-- ..................................................
FY451425       --> GGAAAACAAAAAAGAA-AAAAAAATAGACTTAAAACTATAAAGCCTTGAA
FD975429       --> ..............AAGAAAAAAATAGACTTAAAATTATAAAGTCTTGAA
EW739532       --> ..............agGAAAAAAATAGACTTAAAATTATAAAGTCTTGAA
FD567439       --> .....................................ATAAAGCCTTGAA

               151    -    201
UN15291        --> TTGTTGAATTTCACAAGGAAACTGTTTACCTAGAGGGACAAAAATAATGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916652       <-- ..................................................
EW717490       <-- ..................................................
FD563786       <-- ..................................................
FD979386       <-- ..................................................
FY451425       --> TTGTTGAATTTCACAAGGAAACTGTTTACCTAGAGGGACAAAAATAATGC
FD975429       --> TTGTTGAATTTCACAAGGAAAATGTTTACCTAGAAGGACAAAAATAATGC
EW739532       --> TTGTTGAATTTCACAAGGAAAATGTTTACCTAGAAGGACAAAAATAATGC
FD567439       --> TTGTTGAATTACACAAGGAAACTGTTTACCTAGAGGGACAAAAATAATGC

               201    -    251
UN15291        --> AAGTACAATAATAAGTGAAATCCATCAGTAGATAAGTATTATATCTACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916652       <-- ..................................................
EW717490       <-- ..................................................
FD563786       <-- ..................................................
FD979386       <-- ..................................................
FY451425       --> AAGTACAATAATAAGTGAAATCCATCAGTAGATAAGTATTATATCTACAT
FD975429       --> AAGTACAATAATAAGTGAAACCCATCAGTAGATAAGTATTATATCTACAT
EW739532       --> AAGTACAATAATAAGTGAAACCCATCAGTAGATAAGTATTATATCTACAT
FD567439       --> AAGTACAATAATAAGTGAAATCCATCAGTAAATAAGTATTATATCTACAT

               251    -    301
UN15291        --> AATAACCTTTTTGAGACCTGACCATATT-GCCAATGATAGCAATCGCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916652       <-- .......TTTTTGAGAC-TGACCATATT-GCCAATGATAGCAATCGCT-C
EW717490       <-- ..................................................
FD563786       <-- ..................................................
FD979386       <-- ..................................................
FY451425       --> AATAACCTTTTTGAGACCTGACCATATT-GCCAATGATAGCAATCGCTTC
FD975429       --> AATAACCTTTTTGAGACCTGACCATATT-GCCAATGATAGCAATCGCTTC
EW739532       --> AATAACCTTTTTGAGACCTGACCATATT-GCCAATGATAGCAATCGCTTC
FD567439       --> AATAACCTTTTTGAGACCTGACCATATTTGCCAATGATAGCAATCGCTTC

               301    -    351
UN15291        --> CTCATCACCATCATCACGTCAAAACTATAATCGTCGTTTCATCACAGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916652       <-- CTCATCACCATCATCACGTCAAAACTATAATCGTCGTTTCATCACAGGAA
EW717490       <-- ..................................................
FD563786       <-- ..................................................
FD979386       <-- ..................................................
FY451425       --> CTCATCACCATCATCACGTCAAAACTATAATCGTCGTTTCATCACAGGAA
FD975429       --> CTCATCACCATCATCACGTCAAAACTATAATCGTCGTTTCATCACAGGAA
EW739532       --> CTCATCACCATCGTCACGTCAAAACTATAATCGTCGTTTCATCACAGGAA
FD567439       --> CTCATCACCATCATCACGTCAAAACTATAATCGTCGTTTCATCACAGGAA

               351    -    401
UN15291        --> ATACGGAACTCCAGTCCTTGGCCCTCTCATTTGATTGTTCTCTTCTGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916652       <-- ATACGGAACTCCGGTCCTTGGCCCTCTCATTTGATTGTTCTCTTCTGTCT
EW717490       <-- ..................................................
FD563786       <-- ..................................................
FD979386       <-- ..................................................
FY451425       --> ATACGGAACTCCAGTCCTTGGCCCTCTCATTTGATTGTTCTCTTCTGTCT
FD975429       --> ATACGGAACTCCAGTCCTTGGCCCTCTCATTTGATTGTTCTCTTCTGTCT
EW739532       --> ATACGGAACTCCAGTCCTTGGCCCTCTCATTTGATTGTTCTCTTCTGTCT
FD567439       --> ATACGGAACTCCAGTTCTTGGCCCTCTCATTTGATTGTTCTCTTCTGTCT

               401    -    451
UN15291        --> CGTTGAAGTACTTCACATCCCTTTCCATGTTCTCATCGAAACTCAATATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916652       <-- CGTTGAAGTACTTCACATCCCTTTCCATGTTCTCATCGAAACTCAATATA
EW717490       <-- ..................................................
FD563786       <-- ..................................................
FD979386       <-- ..................................................
FY451425       --> CGTTGAAGTACTTCACATCCCTTTCCATGTTTTCATCGAAACTCAATATA
FD975429       --> CGTTGAAGTACTTCACATCCCTTTCCATGTTCTCATCGAAACTCAATATA
EW739532       --> CGTTGAAGTACTTCACATCCCTTTCCATGTTCTCATCGAAACTCAATATA
FD567439       --> CGTTGAAGTACTTCACATCCCTTTCCATGTTTTCATCGAAACTCAATATA

               451    -    501
UN15291        --> GAAGCGACATTGCCACAGCGGTAGCAGTAATTAGGCGCAGACCATACAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916652       <-- GAAGCGACATTGCCACAGCGGTAGCAGTAATTAGGCGCAGACCATACAGT
EW717490       <-- ..............ACAGCGGTAGCAGTAATTAGGTGCAGACCACACAGT
FD563786       <-- ..................................................
FD979386       <-- ..................................................
FY451425       --> GAAGCGACATTGCCACAGCGGTAGCAGTAATTAGGCGCAGACCATACAGT
FD975429       --> GAAGCGACATTGCCACAGCGGTAGCAGTAATTAGGCGCAGACCATACAGT
EW739532       --> GAAGCGACATTGCCACAGCGGTAGCAGTAATTAGGCGCAGACCATACAGT
FD567439       --> AAAGCGACATTGCCACAGCGGTAGCAGTAATTAGGTGCAAACCATACAGT

               501    -    551
UN15291        --> TACAAGACCTTTATCTTGGAACATGTACTTAAGACCTTCTTGTACCAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916652       <-- TACAAGACCTTTATCTTGGAACATGTACTTAAGACCTTCTTGTACCAGTT
EW717490       <-- TACAAG-GCTTTATCTTGGAACATGTACTTAAGACCTTCTTGTACCAGTT
FD563786       <-- ..................................................
FD979386       <-- ..................................................
FY451425       --> TACAAGGCCTTTATCTTGGAACATGTACTTAAGACCTTCTTGTACCAGTT
FD975429       --> TACAAGACCTTTATCTTGGAACATGTACTTAAGACCTTCTTGTACCAGTT
EW739532       --> TACAAGACCTTTATCTTGGAACATGTACTTAAAACCTTCTTGTACCAGTT
FD567439       --> TACAAGGCCTTTATCTTGGAACATGTACTTAAAACCTTCTTGTACCAGTT

               551    -    601
UN15291        --> GGTGAGCACGGCACACTAGCTCAAGTTTGTTGATGTGATTGAACTCAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916652       <-- GGTGAGCACGGCACACTAGCTCAAGTTTGTTGATGTGATTGAACTCAGTA
EW717490       <-- GGTGAGCACGGCACACTAGATCAAGTTTGTTGATGTGATTGAACTCAGTA
FD563786       <-- ..................................................
FD979386       <-- ..................................................
FY451425       --> GGTGAGCACGGCACACTAGATCAAGTTTGTTGATGTGATTGAACTCAGTA
FD975429       --> GGTGAGCACGGCACACTAGCTCAAGTTTGTTGATGTGATTGAACTCAGTA
EW739532       --> GGTGAGCACGGCACACTAGCTCAAGTTTGTTGATGTGATTGAACTCAGTA
FD567439       --> GGTGAGCACGGCACACTAGCTCAAGTTTGTTGATGTGATTGAACTCAGTA

               601    -    651
UN15291        --> GTAACCCTGGATCCGAAAAGCCAGCCAGCTCCACGTGGACTAACAGCCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916652       <-- GTAACCCTGGATCCGAAAAGCCAGCCAGCTCCACGTGGACTAACAGCCCA
EW717490       <-- GTAACCCTGGATCCGAAAAGCCAGCCAGCTCCACGTGGACTAACAGCCCA
FD563786       <-- ...........................GCTCCACGTGGACTAACAGCCCA
FD979386       <-- ..................................................
FY451425       --> GTAACCCTGGATCCGAAAAGCCAGCCAGCTCCACGTGGACTAACAGCCCA
FD975429       --> GTAACCCTGGATCCGAAAAGCCAGCCAGCCCCACGTGGACTAACAGCCCA
EW739532       --> GTAACCCTGGATCCGAAAAGCCAGCCAGCTCCACGTGGACTAACAGCCCA
FD567439       --> GTAACCCTGGATCCGAAAAGCCAGCCAGCTCCACGTGGACTAACAGCCCA

               651    -    701
UN15291        --> TGTTTCAATATCTTCGGGATCGCTCCACATAAGATCGCAAAAGGGCCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916652       <-- TGTTTCAATATCTTCGGGATCGCTCCACATAAGATCGCAAAAGGGCCCTT
EW717490       <-- TGTTTCAATATCTTCGGGATCGCTCCACATAAGATCGCAAAAGGGCCCTT
FD563786       <-- TGTTTCAATATCTTCGGGGTCGCTCCACATAAGATCGCAAAAGG-CCCTT
FD979386       <-- ..................................................
FY451425       --> TGTTTCAATATCTTCGGGATCGCTCCACATAAGATCGCAAAAGGGCCCTT
FD975429       --> TGTTTCAATATCTTCGGGATCGCTCCACATAAGATCGCAAAAGGGCCCTT
EW739532       --> TGTTTCAATATCTTCGGGATCGCTCCACATAAGATCGCAAAAGGGCCCTT
FD567439       --> TGTTTCAATATCTTCGGGGTCGCTCCACA.....................

               701    -    751
UN15291        --> CATGGGGAATTTCACAATTTCTATCGACCAGTCTTATCTGATCAATTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916652       <-- CATGGGGAATTTCACAATTTCTATCGACCAGTCTTATCTGATCAATTGTC
EW717490       <-- CATGGGGAATTTCACAATTTCTATCCACCAGTCTTATCTGATCAATTGTC
FD563786       <-- CATGGGGAATTTCACAATTTCTATCGACCAGTCTTATCTGATCAATTGTC
FD979386       <-- ............CACAATTTCTATCGACCAGTCTTATCTGATCAATTGTC
FY451425       --> CATGGGGAATTTCACAATTTCTATCGACCAGTCTTATCTGATCAATTGTC
FD975429       --> CATGGGGAATTTCACAATTTCTATCGACCAGTCTTATCTGATCAATTGTC
EW739532       --> CATGGGGAATTTCACAATTTCTATCGACCAGTCTTATCTGATCAATTGTC
FD567439       --> ..................................................

               751    -    801
UN15291        --> CGGACATCTGGGGAAAGGCCACCATGAACACATAGAACGGTGCCATCTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916652       <-- CGGACATCTGGGGAAAGGCCACCATGAACACATAGAACGGTGCCATCTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717490       <-- CGGACATCCGGGGAAAGGCCACCATGAACACATAGAACTGTGCCATCTAT  Raphanus sativus var. oleiformis
FD563786       <-- CGGACATCCGGGGAAAGGCCACCATGAACACACAGAACTGTGCCATCTAT  Raphanus sativus var. oleiformis
FD979386       <-- CGGACATCTGGGGAAAGGCCACCATGAACACATAGAACGGTGCCATCTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY451425       --> CGGACATCCGGGGAAAGGCCACCATGAACACATAGAACTGTGCCATCTA.  Raphanus sativus cv GSK3-1
FD975429       --> CGGACATCTGGGGAAAGGCCACCATGAACACATAGAACGGTGCCATCTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW739532       --> CGGACATCTGGGGAAAGGCCACCATGAACACATAGAACGGCGCCATCTAT  Raphanus sativus cv Rat-Tail Radish #3870
FD567439       --> ..................................................  Raphanus sativus var. oleiformis

               801    -    851
UN15291        --> AATAGCTGATAGGGTAAGATAGTCAAAAACATCTGTGCAATATCGCCACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916652       <-- AATAGCTGATAGGGTAAGATAGTCAAAAACATCTGTGCAATATCGCCACG
EW717490       <-- AATAGCTGATAGGGTAAGATAGTCAAAAACATCTGTGCAATATCGCCACG
FD563786       <-- AATAGCTGATAGGGTAAGATAGTCAAAAACATCTGTGCAATATCGCCACG
FD979386       <-- AATAGCTGATAGGGTAAGATAGTCAAAAACATCTGTGCAATATCGCCACG
FY451425       --> ..................................................
FD975429       --> AATAGCTGATAGGGTAAGATAGTCAAAAACATCTGTGCAATATCGCCACG
EW739532       --> AATAGCTGATAGGGTAAGATAGTC..........................
FD567439       --> ..................................................

               851    -    901
UN15291        --> CATTAGCGTTACCATATTTCCTTTGGCACTCGTCATAGAAACCATATACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916652       <-- CATTAGCGTTACCATATTTCCTTTGGCACTCGTCATAGAAACCATATACC
EW717490       <-- CATTAGCGTTACCATACTTCCTTTGGCACTCGTCATAGAAACCATATACC
FD563786       <-- CATTAGCGTTACCATACTTCCTTTGGCACTCGTCATAGAAACCATATACC
FD979386       <-- CATTAGCGTTACCATATTTCCTTTGGCACTCGTCATAGAAACCATATACC
FY451425       --> ..................................................
FD975429       --> CATTAGCGTTACCATATTTCCTTTGGCACTCGTCATA.............
EW739532       --> ..................................................
FD567439       --> ..................................................

               901    -    951
UN15291        --> TGCGTTAGCTGCCTACTTTCATGATTTCCACGCAGAAGTGTAATATTGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916652       <-- TGCGTTAGCTGCCTACTTTCATGATTTCCACGCAGAAGTGTAATc.....
EW717490       <-- TGCGTTAGCTGCCTACTTTCATGATTTCCACGCAGAAGTGTAATATTGGC
FD563786       <-- TGCGTTAGCTGCCTACTTTCATGATTTCCACGCAGAAGTGTAATATTGGC
FD979386       <-- TGCGTTAGCTGCCTACTTTCATGATTTCCACGCAGAAGTGTAATATTGGC
FY451425       --> ..................................................
FD975429       --> ..................................................
EW739532       --> ..................................................
FD567439       --> ..................................................

               951    -   1001
UN15291        --> TGGATGTCTGGCTTTAAGAAGCAGAAGAATAGTGAAGACTTCAAGGCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916652       <-- ..................................................
EW717490       <-- TGGATGTCTGGCTTTAAGAAGCAGAAGAATAGTGAAGACTTCAAGGCTGT
FD563786       <-- TGGATGTCTGGCTTTAAGAAGCAGAAGAATAGTGAAGACTTCAAGGCTGT
FD979386       <-- TGGATGTCTAGCTTTAAGAAGCAGAAGAATAGTGAAGACTTCAAGGCTGT
FY451425       --> ..................................................
FD975429       --> ..................................................
EW739532       --> ..................................................
FD567439       --> ..................................................

               1001   -   1051
UN15291        --> TGTAACCTCTATCCACAAAGTCCCCCATAAAAATGTAATTGGTGTGGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916652       <-- ..................................................
EW717490       <-- TGTAACCTCTATCCACAAAGTCCCCCATAAAAATGTAATTGGTGTGGGGA
FD563786       <-- TGTAACCTCTATCCACAAAGTCCCCCATAAAAATGTAATTGGTGTGGGGA
FD979386       <-- TGTAACCTCTATCCACAAAGTCCCCCATAAAAATGTAATTGGTGTGGGGA
FY451425       --> ..................................................
FD975429       --> ..................................................
EW739532       --> ..................................................
FD567439       --> ..................................................

               1051   -   1101
UN15291        --> ACATGACCTCCGGTCTGAAAAAGCTTCATGAGATCATGAAACTGGCCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916652       <-- ..................................................
EW717490       <-- ACATGACCTCCGGTCTGAAAAAGCTTCATGAGATCATGAAACTGGCCATG
FD563786       <-- ACATGACCACCGGTCTGAAAAAGCTTCATGAGATCATGAAACTGGCCATG
FD979386       <-- ACATGACCTCCGGTCTGAAAAAGCTTCATTAGATCATGAAACTGGCCATG
FY451425       --> ..................................................
FD975429       --> ..................................................
EW739532       --> ..................................................
FD567439       --> ..................................................

               1101   -   1151
UN15291        --> GATATCACCACAGACGGTGACTGGACTGTTGACAGGCTGCACGTTTGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916652       <-- ..................................................
EW717490       <-- GATATCACCACAGACGGTGACTGGACTGTTGACAGGCTGCACGTTTGACT
FD563786       <-- GATATCACCACAGACGGTGACTGGACTGTTGACAGGCTGCACGTTTGGCG
FD979386       <-- GATATCACCACAGACGGTGACTGGACTGTTGACAGGCTGCACGTTTGACT
FY451425       --> ..................................................
FD975429       --> ..................................................
EW739532       --> ..................................................
FD567439       --> ..................................................

               1151   -   1201
UN15291        --> CCTCAATCAGAATTTCTTTCACGTATTCGCAGAGAAGCTGAAGCTCTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916652       <-- ..................................................
EW717490       <-- CCcc..............................................
FD563786       <-- CCTCAATCAGAATCTCTTTCACGTATTCGCAGAGAAGCTGAAGCTCTTCC
FD979386       <-- CCTCAATCAGAATTTCTTTCACGTATTCGCAGAGAAGCTGAAGCTCTTCC
FY451425       --> ..................................................
FD975429       --> ..................................................
EW739532       --> ..................................................
FD567439       --> ..................................................

               1201   -   1251
UN15291        --> TCGGAGAGATGCTGACCGTCCTTAACCTTCGAAATCCATTGATCCAAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916652       <-- ..................................................
EW717490       <-- ..................................................
FD563786       <-- TCGGAGAGATGCTGACCGTCCTTAACCTTCGAAATCCATTGATCCAAATC
FD979386       <-- TCGGAGAGATGCTGACCGTCCTTAACCTTCGAAATCCATTGATCCAAATC
FY451425       --> ..................................................
FD975429       --> ..................................................
EW739532       --> ..................................................
FD567439       --> ..................................................

               1251   -   1301
UN15291        --> CATTACTCTCTTCTTCTCTTTCTCTCTCTTTCTATCTATCTAGTAATCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916652       <-- ..................................................
EW717490       <-- ..................................................
FD563786       <-- CATTACTCCCTTCT-CTCTCTCTATCTCTTTCTAT----CTAGTAATCAC
FD979386       <-- CATTACTCTCTTCTTCTCTTTCTCTCTCTTTCTATCTATCTAGTAATCAC
FY451425       --> ..................................................
FD975429       --> ..................................................
EW739532       --> ..................................................
FD567439       --> ..................................................

               1301   -   1351
UN15291        --> CCGCCTCTTTCTCCGTCGATTTCAATGGCGAAACTCCGACTTCGTTAGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916652       <-- ..................................................
EW717490       <-- ..................................................
FD563786       <-- CCGCCTCTTCCTCCGTCGATTTCAATGGCGAAAC-CCGACTTCGTTAGGG
FD979386       <-- CCGCCTCTTTCTCCGTCGATTTCAATGGCGAAACTCCGACTTCGTTcc..
FY451425       --> ..................................................
FD975429       --> ..................................................
EW739532       --> ..................................................
FD567439       --> ..................................................

               1351   -   1401
UN15291        --> TTACGTAGGAGGAGGAGAGAGGAAATAGGGGAAGATCGATCTCTCACCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916652       <-- ..................................................
EW717490       <-- ..................................................
FD563786       <-- TTACGTAGGAGGAGGAGAGAGGAAATAGGGGAAGATCGATCTCTCACCGC
FD979386       <-- ..................................................
FY451425       --> ..................................................
FD975429       --> ..................................................
EW739532       --> ..................................................
FD567439       --> ..................................................

               1401   -   1451
UN15291        --> TTCAAACGCCC
                   ~~~~~~~~~~~
EY916652       <-- ...........
EW717490       <-- ...........
FD563786       <-- TTCAAACGCCC
FD979386       <-- ...........
FY451425       --> ...........
FD975429       --> ...........
EW739532       --> ...........
FD567439       --> ...........