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Alignment for radish unigene UN15460

               1      -     51
UN15460        --> GGACTTGTTTAACATCCCTTTGACCATAATCAAAACTACTTCAGATCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571729       <-- ..................................................
EX768804       <-- ..................................................
FD979959       --> GGACTTGTTTAACATCCCTTTGACCATAATCAAAACTACTTCAGATCTGC
EV566647       --> ...................................ggACTTCAGATCTGA
FY447304       --> .............................................TCTGA
FY447236       --> ..................................................
EX764988       --> ..................................................
FD560194       --> ..................................................
FY441405       --> ..................................................
FD543258       --> ..................................................

               51     -    101
UN15460        --> AAGGGCTTTCTCTCGCCAGTCTCTGTCGCGTATTCTCCGGCGTCGTTT-C
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571729       <-- ..................................................
EX768804       <-- ..................................................
FD979959       --> AAGGGCTTTCTCTCGCCAGTCTCTGTCGCGTATTCTCCGGCGTCGTTTTC
EV566647       --> AAGGGCTTTCTCTCGCCAGTCTCTGTCGCGTATTCTCCGGCGTCGTTT-C
FY447304       --> AAGGGCTT-CTCTCGCCAGTCTCTGTCGCGTATTCTCCGGCGTCGTTT-C
FY447236       --> .....gcTTCTCTCGCCAGTCTCTGTCGCGTATTCTCCGGCGTCGTTT-C
EX764988       --> ...............................................T-C
FD560194       --> ..................................................
FY441405       --> ..................................................
FD543258       --> ..................................................

               101    -    151
UN15460        --> ATGATCTGACTTTGGTCTCTTCTTCTCCCC-TCTCTTTTTTTTGTTCT--
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571729       <-- ..................................................
EX768804       <-- ..................................................
FD979959       --> ATGATCTGACTTTGGTCTCTTCTTCTCCCCCTCTCTTTTTTTTGTTCT--
EV566647       --> ATGATCTGACTTTGGTCTCTTCTTCTCCCC-TCTCTTTTTTT-GTTCT--
FY447304       --> ATGATCTGACTTTGGTCTCTTCTTCTCCCC-TCTCTTTTTTTTGTTCTCT
FY447236       --> ATGATCTGACTTTGGTCTCTTCTTCTCCCC-TCTCTTTTTTTTGTTCTCT
EX764988       --> ATGATCTGACTTTGGTCTCTTCTTCTCCCCCTCTCTTTTTTTTGT-CT--
FD560194       --> ..........................................gGTTCT--
FY441405       --> ..................................................
FD543258       --> ..................................................

               151    -    201
UN15460        --> --TTCTTTTACTTGGTCTACTTCTGAACATGCCACGCCCTTTCTTCCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571729       <-- ..................................................
EX768804       <-- ..................................................
FD979959       --> --TTCTTTTACTTGGTCTACTTCTGAACATGCCACGCCCTTTCTTCCACA
EV566647       --> --TTCTTTTACTTGGTCTACTTCTGAACATGCCACGCCCTTTCTTCCACA
FY447304       --> CTTTCTTTTACTTGGTCTACTTCTGAACATGCCACGCCCTTTCTTCCACA
FY447236       --> CTTTCTTTTACTTGGTCTACTTCTGAACATGCCACGCCCTTTCTTCCACA
EX764988       --> --TTCTTTTACTTGGTCTACTTCTGAACATGCCACGCCCTTTCTTCCACA
FD560194       --> --TTCTTTTACTTGGTCTACTTCTGAACATGCCACGCCCTTTCTTCCACA
FY441405       --> ..................................................
FD543258       --> ..................................................

               201    -    251
UN15460        --> AGCTGATTTTCTCATCCACTATCCAAGAAAAACGTCTGAGAGTTCCAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571729       <-- ..................................................
EX768804       <-- ..................................................
FD979959       --> AGCTGATTTTCTCATCCACTATCCAAGAAAAACGTCTGAGAGTTCCAGAT
EV566647       --> AGCTGATTTTCTCATCCACTATCCAAGAAAAACGTCTGAGAGTTCCAGAT
FY447304       --> AGCTGATTTTCTCATCCACTATCCAAGAAAAACGTCTGAGAGTTCCAGAT
FY447236       --> AGCTGATTTTCTCATCCACTATCCAAGAAAAACGTCTGAGAGTTCCAGAT
EX764988       --> AGCTGATTTTCTCATCCACTATCCAAGAAAAACGTCTGAGAGTTCCAGAT
FD560194       --> AGCTGATTTTCTCATCCACTATCCAAGAAAAACGTCTGAGAGTTCCAGAT
FY441405       --> ..................................................
FD543258       --> ..................................................

               251    -    301
UN15460        --> AAGTTTGCGAGTAAATTCAAGGACGAGCTATCGGTTGCAGTTGCACTCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571729       <-- ..................................................
EX768804       <-- ..................................................
FD979959       --> AAGTTTGCGAGTAAATTCAAGGACGAGCTATCGGTTGCAGTTGCACTCAC
EV566647       --> AAGTTTGCGAGTAAATTCAAGGACGAGCTATCGGTTGCAGTCGCACTCAC
FY447304       --> AAGTTTGCGAGTAAATTCAAGGACGAGCTATCGGTTGCAGTTGCACTCAC
FY447236       --> AAGTTTGCGAGTAAATTCAAGGACGAGCTATCGGTTGCAGTTGCACTCAC
EX764988       --> AAGTTTGCGAGTAAATTCAAGGACGAGCTATCGGTTGCAGTTGCACTCAC
FD560194       --> AAGTTTGCGAGTAAATTCAAGGACGAGCTATCGGTTGCAGTTGCACTCAC
FY441405       --> ...........................CTATCGGTTGCAGTTGCACTCAC
FD543258       --> ..................................................

               301    -    351
UN15460        --> AGTACCAGACGGTCATGTTTGGCGTGTAGGACTCAGGAAAGCTGACAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571729       <-- ..................................................
EX768804       <-- ..................................................
FD979959       --> AGTACCAGACGGTCATGTTTGGCGTGTAGGACTCAGGAAAGCTGACAACA
EV566647       --> AGTACCAGACGGTCATGTTTGGCGTGTAGGACTCAGGAAAGCTGACAGCA
FY447304       --> AGTACCAGACGGTCATGTTTGGCGTGTAGGACTCAGGAAAGCTGACAACA
FY447236       --> AGTACCAGACGGTCATGTTTGGCGTGTAGGACTCAGGAAAGCTGACAACA
EX764988       --> AGTACCAGACGGTCATGTTTGGCGTGTAGGACTCAGGAAAGCTGACAACA
FD560194       --> AGTACCAGACGGTCATGTTTGGCGTGTAGGACTCAGGAAAGCTGACAACA
FY441405       --> AGTACCAGACGGTCACGTTTGGCGTGTAGGACTCAGGAAAGCTGACAACA
FD543258       --> ....................GGCGTGTAGGACTAAGAAAATCTGACAACA

               351    -    401
UN15460        --> ACAAAATCTGGTTTCAAGATGGTTGGCAAGAGTTCGTCGACCGTTACTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571729       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX768804       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979959       --> ACAAAATCTGGTTTCAAGATGGTTGGCAAGAGTTCGTCGACCGTTACTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566647       --> ACAAAATCTGGTTTCAAGATGGTTGGCAAGAGTTCGTCGACCGTTACTCT  Raphanus raphanistrum subsp. landra
FY447304       --> ACAAAATCTGGTTTCAAGATGGTTGGCAAGAGTTTGTCGACCGTTACTCC  Raphanus sativus cv GSK3-1
FY447236       --> ACAAAATCTGGTTTCAAGATGGTTGGCAAGAGTTTGTCGACCGTTACTCC  Raphanus sativus cv GSK3-1
EX764988       --> ACAAAATCTGGTT-CAAGATGGT...........................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD560194       --> ACAAAATCTGGTTTCAAGATGGTTGGCAAGAGTTCGTCGACCGTTACTCT  Raphanus raphanistrum subsp. landra
FY441405       --> ACAAAATCTGGTTTCAAGATGGTTGGCAAGAGTTTGTCGACCGTTACTCC  Raphanus sativus cv GSK3-1
FD543258       --> ACAAAATCTGGTTTCAAGATGGTTGGCAAGAGTTCGTCGACCGTTACTCC  Raphanus raphanistrum subsp. raphanistrum (MS)

               401    -    451
UN15460        --> ATCCGCATTGGCTATCTTTTGGTCTTTAGATACGAAGGCAACTCTGCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571729       <-- ..................................................
EX768804       <-- ..................................................
FD979959       --> ATCCGCATTGGCTATCTTTTGGTCTTTAGATACGAAGGCAACTCTGCCTT
EV566647       --> ATCCGCATTGGCTATCTTTTGGTCTTTAGATACGAAGGCAACTCTGCCTT
FY447304       --> ATCCGCATTGGCTATCTTTTGGTCTTTAGATACGAAGGCAACTCTGCCTT
FY447236       --> ATCCGCATTGGCTATCTTTTGGTCTTTAGATACGAAGGCAACTCTGCCTT
EX764988       --> ..................................................
FD560194       --> ATCCGCATTGGCTATCTTTTGGTCTTTAGATACGAAGGCAACTCTGCCTT
FY441405       --> ATCCGCATTGGCTATCTTTTGGTCTTTAGATACGAAGGCAACTCTGCCTT
FD543258       --> ATCCGCATTGGCTATCTTTTGGTCTTTAGATACGAAGGCAACTCTGCCTT

               451    -    501
UN15460        --> CAGCGTCTACATTTACAACTTATCACACTCCGAGATCAACTACCATTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571729       <-- ..................................................
EX768804       <-- ..................................................
FD979959       --> CAGCGTCTACATTTACAACTTATCACACTCCGAGATCAACTACCATTCCT
EV566647       --> CAGCGTCTACATTTACAACTTATCACACTCCGAGATCAACTACCATTCCT
FY447304       --> CAGCGTCTACATTTACAACTTATCACACTCCGAGATCAACTACCATTCCT
FY447236       --> CAGCGTCTACATTTACAACTTATCACACTCCGAGATCAACTACCATTCCT
EX764988       --> ..................................................
FD560194       --> CAGCGTCTACATTTACAACTTATCACACTCCGAGATCAACTACCATTCCT
FY441405       --> CAGCGTCTACATTTACAACTTATCACACTCCGAGATCAACTACCATTCCT
FD543258       --> CAGCGTCTACATTTACAACTTATCACACTCCGAGATCAACTACCATTCCT

               501    -    551
UN15460        --> CCGGTCTCATGGACACTCCACACAACCACCTCAAACGCGCCCGTTTGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571729       <-- ..................................................
EX768804       <-- ..................................................
FD979959       --> CCGGTCTCATGGACACTCCACGCAACCACCTCAAACGCGCCCGTTTGTTT
EV566647       --> CCGGTCTCATGGACACTCCACACAACCACCTCAAACGCGCCCGTTTGTTT
FY447304       --> CCGGTCTCATGGACACTCCACACAACCACCTCAAACGCGCCCGTTTGTTT
FY447236       --> CCGGTCTCATGGACACTCCACACAACCACCTCAAACGCGCCCGTTTGTTT
EX764988       --> ..................................................
FD560194       --> CCGGTCTCATGGACACTCCACACAACCACCTCAAACGCGCCCGTTTGTTT
FY441405       --> CCGGTCTCATGGACACTCCACACAACCACCTCAAACGCGCCCGTTTGTTT
FD543258       --> CCGGTCTCATGGACACTCCTCACAACCACCTCAAACGCGCCCGTTTGTTT

               551    -    601
UN15460        --> GAAGACCTTGAAGACGAAGACGCCGCCGCCG---AGGTTGTTGTTTACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571729       <-- ..................................................
EX768804       <-- ..................................................
FD979959       --> GAAGACCTTGAAGACGAAGACGCCGCCGCCGCCGAGCTTGTTGTTTACTC
EV566647       --> GAAGACCTTGAAGACGAAGACGCCGCCGCCG---AGGTTGTTGTTTACTC
FY447304       --> GAAGACCTTGAAGACGAAGACGCCGCCGCCG---AGGTTGTTGTTTACTC
FY447236       --> GAAGACCTTGAAGACGAAGACGCCGCCGCCG---AGGTTGTTGTTTACTC
EX764988       --> ..................................................
FD560194       --> GAAGACCTTGAAGACGAAGACGCCGCCGCCG---AGGTTGTTGTTTACTC
FY441405       --> GAAGACCTTGAAGACGAAGACGCCGCCGCCG---AGGTTGTTGTTTACTC
FD543258       --> GAAGACCTTGAAGACGAAGACGCCGCCGCCG---AGGTTGTTGTTTACTC

               601    -    651
UN15460        --> TTCTTCTTCTTCGGTGTATCCACCGTCATCACATCATCCTGGAGTTACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571729       <-- ..................................................
EX768804       <-- ..................................................
FD979959       --> TTCTTCTTCTTCGGTGTATCCACCGTCATCACATCATCCTGGAGTTACTG
EV566647       --> TTCTTCTTCTTCGGTGTATCCACCATCATCACATCATCCTGGAGTTACTG
FY447304       --> TTCTTCTTCTTCGGTGTATCCACCGTCATCACATCATCCTGGAGTTACTG
FY447236       --> TTCTTCTTCTTCGGTGTATCCACCGTCATCACATCATCCTGGAGTTACTG
EX764988       --> ..................................................
FD560194       --> TTCTTCTTCTTCGGTGTATCCACTGTCATCACATCATCCTGGAGTTACTG
FY441405       --> TTCTTCTTCTTCGGTGTATCCACCGTCATCACATCATCCTGGAGTTACTG
FD543258       --> TTCTTCTTCTTCGGTGTATCCACCATCATCACATCATCCTGGAGTTACTG

               651    -    701
UN15460        --> TAGCCGTTAATAAAGGGTATGCTAGTAGTAGTCCAGCTATCCAGAGCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571729       <-- ..................................................
EX768804       <-- ..................................................
FD979959       --> TAGCCGCTAAT.......................................
EV566647       --> TAGCCGTTAATAAAGGATATGCTAGTAGT---CCAGCTATACAGAGCTTC
FY447304       --> TAGCCGTTAATAAAGGGTATGCTAGTAGTAGTCCAGCTATCCAGAGCTTC
FY447236       --> TAGCCGTTAATAAAGGGTATGCTAGTAGTAGTCCAGCTATCCAGAGCTTC
EX764988       --> ..................................................
FD560194       --> TAGCCGTTAATAAAGGGTATGCTAGTAGT---CCAGCTATCCAGAGCTTC
FY441405       --> TAGCCGTTAATAAAGGGTATGCTAGTAGTAGTCCAGCTATCCAGAGCTTC
FD543258       --> TAGCCGTTAATAAAGGGTATGCTAGTAGTAGTCCAGCTATCCAGAGCTTC

               701    -    751
UN15460        --> TTCGCTGGACCTGTTAAAGCTGAAGAGACAACACCAACCCCAAAAGTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571729       <-- ..............TAAAGCTGAAGAGACAACACCAACCCCAAAAGTTGC
EX768804       <-- ..................................................
FD979959       --> ..................................................
EV566647       --> TTCGCTGGACCTGTTAAAGCTGAAGAGACAACACCAACCCCAAAAGTTGC
FY447304       --> TTCGCTGGACCTGTTAAAGCTGAAGAGACAACACCAACCCCAAAAGTTGC
FY447236       --> TTCGCTGGACCTGTTAAAGCTGAAGAGACAACACCAACCCCAAAAGTTGC
EX764988       --> ..................................................
FD560194       --> TTCGCTGGACCTGTTAAAGCTGAAGAGACAACACCAGCTCCTAAAGTTGC
FY441405       --> TTCGCTGGACCTGTTAAAGCTGAAGAGACAACACCAACCCCAAAAGTTGC
FD543258       --> TTCGCTGGACCTGTTAAAGCTGAAGAGACAACACCAACCCCAAAAGTTGC

               751    -    801
UN15460        --> TAAAAAGAGAGGGAGGAAGAAGAAGAACGCTGTTCCTGAGGAGATAAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571729       <-- TAAAAAGAGAGGGAGGAAGAAGAAGAACCCTGTTCCTGAGGAAATAAACT
EX768804       <-- .....AGAGAGGGAGGAAGAAGAAGAACCCTGTTCCTGAGGAAATAAACT
FD979959       --> ..................................................
EV566647       --> T.................................................
FY447304       --> TAA...............................................
FY447236       --> TAAAAAGAGAGGGAGGAAGAAGAAGAACGCTGTTCCT.............
EX764988       --> ..................................................
FD560194       --> TAAAAAGAGAGGGAGGAAGAAGAAGAACGCTGTTCCTGAG-AAATAAACT
FY441405       --> TAAAAAGAGAGGGAGGAAGAAGAAGAACGCTGTTCCTGAGGAGATAAACT
FD543258       --> TAAAAAGAGAGGGAGGAAGAAGAAGAACCCTGTTCCTGAGGAGATAAACT

               801    -    851
UN15460        --> CATCTGCTCCACGAGATGATGATCCAGAGAGCCGTTCAAAGTTCTACGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571729       <-- CATCTGCTCCACGAGATGATGATCCAGAGAGCCGTTCAAAGTTCTACGAG
EX768804       <-- CATCTGCTCCACGAGATGATGATCCAGAGAGCCGTTCAAAGTTCTACGAG
FD979959       --> ..................................................
EV566647       --> ..................................................
FY447304       --> ..................................................
FY447236       --> ..................................................
EX764988       --> ..................................................
FD560194       --> CATCTGCTCCACGAGATGATGATCCAGAGAGCCGTTCAA-GTTCTACGAG
FY441405       --> CATCTGCTCCACGAGATGATGACCCAGAGAGCCGTTCAAAGTTCTACGAG
FD543258       --> CATCTGCTCCACGAGATGATGATCCAGAGAGCCGTTCAAAGTTCTACGAG

               851    -    901
UN15460        --> AGTGCTTCTGCGAGAAAGAGAACGGTGACTGCAGAAGAAAGAGAGAGGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571729       <-- AGTGCTTCTGCGAGAAAGAGAACGGTGACTGCAGAAGAAAGAGAGAGGGC
EX768804       <-- AGTGCTTCTGCGAGAAAGAGAACGGTGACTGCAGAAGAAAGAGAGAGGGC
FD979959       --> ..................................................
EV566647       --> ..................................................
FY447304       --> ..................................................
FY447236       --> ..................................................
EX764988       --> ..................................................
FD560194       --> AGTGCTTCTGCGAGAAAGAGAACG-TGACTGCAGA-GAAAGAGAGAGGGC
FY441405       --> AGTGCTTCTGCTAGAAAGAGAACGGTGACTGCAGAGGAAAGAGAGAGGGC
FD543258       --> AGTGCTTCTGCGAGAAAGAGAACGGTGACTGCAGAAGAGAGAGAGAGGGC

               901    -    951
UN15460        --> CATCAATGCAGCCAAAACGTTCGAGCCAACAAACCCTTTCTTCAGAGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571729       <-- CATCAATGCAGCCAAAACGTTCGAGCCAACAAACCCTTTCTTCAGAGTTG
EX768804       <-- CATCAATGCAGCCAAAACGTTCGAGCCAACAAACCCTTTCTTCAGAGTTG
FD979959       --> ..................................................
EV566647       --> ..................................................
FY447304       --> ..................................................
FY447236       --> ..................................................
EX764988       --> ..................................................
FD560194       --> CATCA-TGCAGCCAAA-CGTTCGAGC........................
FY441405       --> CATCAATGCAGCCAAAACGTTCGAGCCAACAAACCCTTTCTTCAGAGTTG
FD543258       --> CATCAACGCAGCTAAAACATTCGAGCCAACTAACCCTTTCTTCAGGGTTG

               951    -   1001
UN15460        --> TTCTCCGACCATCTTATCTATACAGAGGCTGCATCATGTATCTGCCTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571729       <-- TTCTCCGACCATCTTATCTATACAGAGGCTGCATCATGTATCTGCCTTCT
EX768804       <-- TTCTCCGACCATCTTATCTATACAGAGGCTGCATCATGTATCTGCCTTCT
FD979959       --> ..................................................
EV566647       --> ..................................................
FY447304       --> ..................................................
FY447236       --> ..................................................
EX764988       --> ..................................................
FD560194       --> ..................................................
FY441405       --> TTCTCCGACCATCTTATCTATACAGAGGCTGCATCATGTATCTGCCTTCT
FD543258       --> TTCTCCGACCATCTTATCTATACCGAGGCTGCATCATGTATCTGCCTTCT

               1001   -   1051
UN15460        --> GGTTTTGCTGAGAAGTACTTAAGTGGGATCTCGGGGTTCATCAAGGTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571729       <-- GGTTTTGCTGAGAAGTACTTAAGTGGGATCTCGGGGTTCATCAAGGTCCA
EX768804       <-- GGTTTTGCTGAGAAGTACTTAAGTGGGATCTCGGGGTTCATCAAGGTCCA
FD979959       --> ..................................................
EV566647       --> ..................................................
FY447304       --> ..................................................
FY447236       --> ..................................................
EX764988       --> ..................................................
FD560194       --> ..................................................
FY441405       --> GGTTTTGCTGAGAAGTACTTAAGTGGGATCTCGGGGTTCATCAAGGTCCA
FD543258       --> GGTTT-GCTGAGA-GTACTTA.............................

               1051   -   1101
UN15460        --> GCTCGGGGAGAAACAGTGGCCAGTGAGATGCCTCTACAAAGCAGGGAGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571729       <-- GCTCGGGGAGAAACAGTGGCCAGTGAGATGCCTCTACAAAGCAGGGAGGG
EX768804       <-- GCTCGGGGAGAAACAGTGGCCAGTGAGATGCCTCTACAAAGCAGGGAGGG
FD979959       --> ..................................................
EV566647       --> ..................................................
FY447304       --> ..................................................
FY447236       --> ..................................................
EX764988       --> ..................................................
FD560194       --> ..................................................
FY441405       --> GCTCGGGGAGAAACAATGGCCAGTGAGATGCCTTTACAAAGCAGGGAGGG
FD543258       --> ..................................................

               1101   -   1151
UN15460        --> CCAAGTTCAGCCAAGGATGGTACGAGTTCACCCTGGAGAACAACCTGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571729       <-- CCAAGTTCAGCCAAGGATGGTACGAGTTCACCCTGGAGAACAACCTGGGA
EX768804       <-- CCAAGTTCAGCCAAGGATGGTACGAGTTCACCCTGGAGAACAACCTGGGA
FD979959       --> ..................................................
EV566647       --> ..................................................
FY447304       --> ..................................................
FY447236       --> ..................................................
EX764988       --> ..................................................
FD560194       --> ..................................................
FY441405       --> CCAAGTTCAGCCAAGGATGGTAC...........................
FD543258       --> ..................................................

               1151   -   1201
UN15460        --> GAAGGTGACGTGTGCGTGTTCGAGCTGCTCAGAACCAGAGATTTCGTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571729       <-- GAAGGTGACGTGTGCGTGTTCGAGCTGCTCAGAACCAGAGATTTCGTCCT
EX768804       <-- GAAGGTGACGTGTGCGTGTTCGAGCTGCTCAGAACCAGAGATTTCGTCCT
FD979959       --> ..................................................
EV566647       --> ..................................................
FY447304       --> ..................................................
FY447236       --> ..................................................
EX764988       --> ..................................................
FD560194       --> ..................................................
FY441405       --> ..................................................
FD543258       --> ..................................................

               1201   -   1251
UN15460        --> GAAAGTAACAGCCTATCGAGTCAACGGAATCTAGTACTAGTCGTTTCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571729       <-- GAAAGTAACAGCCTATCGAGTCAACGGAATCTAGTACTAGTCGTTTCCTT
EX768804       <-- GAAAGTAACAGCCTATCGAGTCAACGGAATCTAGTACTAGTCGTTTCCTT
FD979959       --> ..................................................
EV566647       --> ..................................................
FY447304       --> ..................................................
FY447236       --> ..................................................
EX764988       --> ..................................................
FD560194       --> ..................................................
FY441405       --> ..................................................
FD543258       --> ..................................................

               1251   -   1301
UN15460        --> ATCGATTGATCTGCAGTGGAGGAGGAGGGATATCAAACCGCAAATTTCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571729       <-- ATCGATTGATCTGCAGTGGAGGAGGAGGGATATCAAACCGCAAATTTCGT
EX768804       <-- ATCGATTGATCTGCAGTGGAGGAGGAGGGATATCAAACCGCAAATTTCGT
FD979959       --> ..................................................
EV566647       --> ..................................................
FY447304       --> ..................................................
FY447236       --> ..................................................
EX764988       --> ..................................................
FD560194       --> ..................................................
FY441405       --> ..................................................
FD543258       --> ..................................................

               1301   -   1351
UN15460        --> GTAGGGTTTTTTTAAATATCTTTAATTTAAAAAATAACTAAACTCTCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571729       <-- GTAGGGTTTTTTTAAATATCTTTAATTTAAAAAATAACTAAACTCTCTTT
EX768804       <-- GTAGGGTTTTTTTAAATATCTTTAATTTAAAAAATAACTAAACTCTCTTT
FD979959       --> ..................................................
EV566647       --> ..................................................
FY447304       --> ..................................................
FY447236       --> ..................................................
EX764988       --> ..................................................
FD560194       --> ..................................................
FY441405       --> ..................................................
FD543258       --> ..................................................

               1351   -   1401
UN15460        --> CTCTCTCTTTCTATCTATCTCTGTGTCATTGAGTCAGTTGTGTCGTTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571729       <-- CTCTCTCTTTCTATCTATCTCTGTGTCATTGAGTCAGTTGTGTCGTTTTC
EX768804       <-- CTCTCTCTTTCTATCTATCTCTGTGTCATTGAGTCAGTTGTGTCGTTTTC
FD979959       --> ..................................................
EV566647       --> ..................................................
FY447304       --> ..................................................
FY447236       --> ..................................................
EX764988       --> ..................................................
FD560194       --> ..................................................
FY441405       --> ..................................................
FD543258       --> ..................................................

               1401   -   1451
UN15460        --> TTCTCGATGTGGATAAGTTGTTTTATCATAATATGTAACCTCCGTGTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571729       <-- TTCTCGATGTGGATAAGTTGTTTTATCATAATATGTAACCTCCGTGTGCA
EX768804       <-- TTCTCGATGTGGATAAGTTGTTTTATCATAATATGTAACCTCCGTGTGCA
FD979959       --> ..................................................
EV566647       --> ..................................................
FY447304       --> ..................................................
FY447236       --> ..................................................
EX764988       --> ..................................................
FD560194       --> ..................................................
FY441405       --> ..................................................
FD543258       --> ..................................................

               1451   -   1501
UN15460        --> ACTCAAAATTGTTTGATTAGAAGTTAGGTTTAAGAGG.
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571729       <-- ACTCAAAATTGTTTGATTAGAAGTTAGGTTTAAGAGGt
EX768804       <-- ACTCAAAATTGTTTGATTAGAAGTTAGGTTTAAGAGGg
FD979959       --> ......................................
EV566647       --> ......................................
FY447304       --> ......................................
FY447236       --> ......................................
EX764988       --> ......................................
FD560194       --> ......................................
FY441405       --> ......................................
FD543258       --> ......................................