1      -     51
UN15590        --> CCCACCACGAATGAATGAAATGTCTATATATATTATTATTGTGTGTGTG-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971019       <-- .....................................ATTATGTGTGTG-
EV569110       <-- ..................................................
EW715064       <-- ..................................................
EV538375       <-- ..................................................
EV551331       <-- ..................................................
FD966273       <-- ..................................................
EX771889       <-- ..................................................
FD978716       <-- ..................................................
EV548575       <-- ..................................................
EX756881       <-- ..................................................
FD544139       <-- ..................................................
FD966082       <-- ..................................................
FD541334       <-- ..................................................
FD956640       <-- ..................................................
FD981301       <-- ..................................................
EV536304       <-- ..................................................
FD540478       <-- ..................................................
EY948593       <-- ..................................................
EY948732       <-- ..................................................
EY949447       <-- ..................................................
EX770407       <-- ..................................................
EV544220       --> CCCACCACGAATGAATGAAATGTCTATATATATTATTATTGTGTGTGTGT
EV540785       --> ............GAATGAAATGTCTATATATATTATTATTGTGTGTG---
EX774510       --> ...........cGAATGAAATGTCTATATATATTATTATTGTGTGTGTG-
EY926610       --> ............GAATGAAATGTCTATATATATTATTATTGTGTGTGTG-
EY944266       --> ...........gGAATGAAATGTGTATATATATTATTATTGTGTGTGTG-
EY944380       --> ...........gGAATGAAATGTGTATATATATTATTATTGTGTGTGTG-
EY944961       --> ............GAATGAAATGTGTATATATATTATTATTGTGTGTGTG-
FD537639       --> ............GAATGAAATGTCTATATATATTATTATTGTGTGTGTG-
FD977077       --> ............GAATGAAATGTCTATATATATTATTATTGTGTGTGTGT
EV542398       --> ............ggATGAAATGTCTATATATATTATTATTGTGTGTGTG-
EX760599       --> ............ggATGAAATGTCTATATATATTATTATTGTGTGTG---
EX775963       --> ............ggATGAAATGTCTATATATATTATTATTGTGTGTGTG-
FD536976       --> ............ggATGAAATGTCTATATATATTATTATTGTGTGTG---
FD539808       --> ............ggATGAAATGTCTATATATATTATTATTGTGTGTG---
FD952479       --> ............ggATGAAATGTGTATATATATTATTATTGTGTGTGTG-
FD974899       --> ............agATGAAATGTCTATATATATTATTATTGTGTGTGTGT
EV573701       --> ..................................................
EW719707       --> ..................................................

               51     -    101
UN15590        --> -GTAATAATGACTTTTAACAATCATTTACAGTCATTTTACGGATTATTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971019       <-- --TAATAATGACTTT-AACAATCATTTACAGTCATTTCACGGATTATTT-
EV569110       <-- ..........ACTTTTAACAATCATTTACAGTCATTT-ACGGATTATTTT
EW715064       <-- ...........................ACAGTCATTTTACGGATTATATT
EV538375       <-- ..................................................
EV551331       <-- ..................................................
FD966273       <-- ..................................................
EX771889       <-- ..................................................
FD978716       <-- ..................................................
EV548575       <-- ..................................................
EX756881       <-- ..................................................
FD544139       <-- ..................................................
FD966082       <-- ..................................................
FD541334       <-- ..................................................
FD956640       <-- ..................................................
FD981301       <-- ..................................................
EV536304       <-- ..................................................
FD540478       <-- ..................................................
EY948593       <-- ..................................................
EY948732       <-- ..................................................
EY949447       <-- ..................................................
EX770407       <-- ..................................................
EV544220       --> GGTAATAATGACTTTTAACAATCATTTACAGTCATTTTACGGATTATTTT
EV540785       --> -GTAATAATGACTTTTAACAGTCATTTACAGTCATTTCACGGATTATTTT
EX774510       --> -GTAATAATGACTTTTAACAATCATTTACAGTCATTTTACGGATTATTTT
EY926610       --> -GTAATAATGACTTTTAACAATCATTTACAGTCATTTTACGGATTATATT
EY944266       --> -GTAATAATGACTTTTAACAATCATTTACAGTCATTTTACGGATTATTTT
EY944380       --> -GTAATAATGACTTTTAACAATCATTTACAGTCATTTTACGGATTATTTT
EY944961       --> -GTAATAATGACTTTTAACAATCATTTACAGTCATTTTACGGATTATTTT
FD537639       --> -GTAATAATGACTTTTAACAATCATTTACAGTCATTTTACGGATTATTTT
FD977077       --> GGTAATAATGACTTTTAACAATCATTTACAGTCATTTTACGGATTATTTT
EV542398       --> -GTAATAATGACTTTTAACAATCATTTACAGTCATTTTACGGATTATTTT
EX760599       --> -GTAATAATGACTTTTAACAATCATTTACAGTCATTTCACGGATTATTTT
EX775963       --> -GTAATAATGACTTTTAACAATCATTTACAGTCATTTTACGGATTATTTT
FD536976       --> -GTAATAATGACTTTTAACAATCATTTACAGTCATTTCACGGATTATTTT
FD539808       --> -GTAATAATGACTTTTAACAATCATTTACAGTCATTTCGCGGATTATTTT
FD952479       --> -GTAATAATGACTTTTAACAATCATTTACAGTCATTTTACGGATTATTTT
FD974899       --> GGTAATAATGACTTTTAACAATCATTTACAGTCATTTTACGGATTATTTT
EV573701       --> .GTAATAATGACTTTTAACAATCATTTACAGTCATTTTACGGATTATTTT
EW719707       --> ...........................ACAGTCATTTTACGGATTATATT

               101    -    151
UN15590        --> CTAAAGAATTATTTCGTAAAGAATTATTCGTTATATCTTATAGCAGTATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971019       <-- CTAAAGAATTATTTCGTAAAGAATTATTCGTTATATCTTATAGCAGTATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569110       <-- CTAAAGAATTATTTCATAAAGAATTATTCGTTATATCTTATAGCAGTATA  Raphanus raphanistrum subsp. landra
EW715064       <-- CTAAAGAATTATTTCGTAAAGAATTATTCGTTATATCTTATAGCAGTATA  Raphanus sativus var. oleiformis
EV538375       <-- ...AAGAATTATTTCATAAAGAATTATTCGTTATATCTTATAGCAGTATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV551331       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD966273       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX771889       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD978716       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548575       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX756881       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544139       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966082       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD541334       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD956640       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD981301       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536304       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540478       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY948593       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY948732       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY949447       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX770407       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV544220       --> CTAAAGAATTATTTCATAAAGAATTATTCGTTATATCTTATAGCAGTATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540785       --> CTAAAGAATTATTTCGTAAAGAATTATTCGTTATATCTTATAGCAGTATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX774510       --> CTAAAGAATTATTTCATAAAGAATTATTTGTTATATCTTATAGCAGTATA  Raphanus raphanistrum subsp. landra
EY926610       --> CTAAAGAATTATTTCGTAAAGAATTATTCGTTATATCTTATAGCAGTATA  Raphanus sativus var. oleiformis
EY944266       --> CTAAAGAATTATTTTGTAAAGAATTATTCGTTATATCTTAGAGCAGTATA  Raphanus sativus cv Rat-Tail Radish #3870
EY944380       --> CTAAAGAATTATTTTGTAAAGAATTATTCGTTATATCTTAGAGCAGTATA  Raphanus sativus cv Rat-Tail Radish #3870
EY944961       --> CTAAAGAATTATTTTGTAAAGAATTATTCGTTATATCTTAGAGCAGTATA  Raphanus sativus cv Rat-Tail Radish #3870
FD537639       --> CTAAAGAATTATTTCATAAAGAATTATTCGTTATATCTTATAGCAGTATA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD977077       --> CTAAAGAATTATTTCATAAAGAATTATTCGTTATATCTTATAGCAGTATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542398       --> CTAAAGAATTATTTCATAAAGAATTATTCGTTATATCTTATAGCAGTATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760599       --> CTAAAGAATTATTTCGTAAAGAATTATTCGTTATATCTTATAGCAGTATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX775963       --> CTAAAGAATTATTTCATAAAGAATTATTCGTTATATCTTATAGCAGTATA  Raphanus raphanistrum subsp. landra
FD536976       --> CTAAAGAATTATTTCGTAAAGAATTATTCGTTATATCTTATAGCAGTATA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539808       --> CTAAAGAATTATTTCGTAAAGAATTATTCGTTATATCTTATAGCAGTATA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD952479       --> CTAAAGAATTATTTTGTAAAGAATTATTCGTTATATCTTAGAGCAGTATA  Raphanus sativus cv Rat-Tail Radish #3870
FD974899       --> CTAAAGAATTATTTCATAAAGAATTATTCGTTATATCTTATAGCAGTATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573701       --> CTAAAGAATTATTTCATAAAGAATTATTCGTTATATCTTATAGCAGTATA  Raphanus raphanistrum subsp. landra
EW719707       --> CTAAAGAATTATTTCGTAAAGAATTATTCGTTATATCTTATAGCAGTATA  Raphanus sativus var. oleiformis

               151    -    201
UN15590        --> AGATAAGTTCTATATTGGCGTACAATTGATTTCTTCACCACCCTTGTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971019       <-- AGATAAGTTCTATATTGGCGTACAATTGATTTCTTCACCA-TCTTGTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569110       <-- AGATAAGTTCTATATTGGCGTACAATTGATTTCTTCACCACCCTTGTCTT  Raphanus raphanistrum subsp. landra
EW715064       <-- AGATAAGTTCTATATTGGCGTACAATTGATTTCTTCACCATCCTTGTCTT  Raphanus sativus var. oleiformis
EV538375       <-- AGATAGGTTCTATATTGGCGTACAATTGATTTCTTCACCACCCTTGTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV551331       <-- .................................................T  Raphanus raphanistrum subsp. raphanistrum (NY)
FD966273       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX771889       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD978716       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548575       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX756881       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544139       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966082       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD541334       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD956640       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD981301       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536304       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540478       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY948593       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY948732       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY949447       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX770407       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV544220       --> AGATAAGTTCTATATTGGCGTACAATTGATTTCTTCATCACCCTTGTCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540785       --> AGATAAGTTCTATATTGGCGTACAATTGATTTCTTCACCATCCTTGTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX774510       --> AGATAAGTTCTATATTGGCGTACAATTGATTTCTTCACCACCCTTGTCTT  Raphanus raphanistrum subsp. landra
EY926610       --> AGATAAGTTCTATATTGGCGTACAATTGATTTCTTCACCATCCTTGTCTT  Raphanus sativus var. oleiformis
EY944266       --> AGATAAGTTCTATATTGGCGTACAATTGATTTCTTCACCACCCTTGTCTT  Raphanus sativus cv Rat-Tail Radish #3870
EY944380       --> AGATAAGTTCTATATTGGCGTACAATTGATTTCTTCACCACCCTTGTCTT  Raphanus sativus cv Rat-Tail Radish #3870
EY944961       --> AGATAAGTTCTATATTGGCGTACAATTGATTTCTTCACCACCCTTGTCTT  Raphanus sativus cv Rat-Tail Radish #3870
FD537639       --> AGATAAGTTCTATATTGGCGTACAATTGATTTCTTCACCACCCTTGTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD977077       --> AGATAAGTT--ATAATGGCGTACAATTGATTTCTTCATCACCCTTGTCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542398       --> AGATAGGTTCTATATTGGCGTACAATTGATTTCTTCACCACCCTTGTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760599       --> AGATAAGTTCTATATTGGCGTACAATTGATTTCTTCACCATCCTTGTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX775963       --> AGATAAGTTCTATATTGGCGTACAATTGATTTCTTCACCACCCTTGTCTT  Raphanus raphanistrum subsp. landra
FD536976       --> AGATAAGTTCTATATTGGCGTACAATTGATTTCTTCACCATCCTTGTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539808       --> AGATAAGTTCTATATTGGCGTACAATTGATTTCTTCACCATCCTTGTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD952479       --> AGATAAGTTCTATATTGGCGTACAATTGATTTCTTCACCACCCTTGTCTT  Raphanus sativus cv Rat-Tail Radish #3870
FD974899       --> AGATAAGTTCTATATTGGCGTACAATTGATTTCTTCATCACCCTTGTCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573701       --> AAATAAGTTCTATATTGGCGTACAATTGATTTCTTCACCACCCTTGTCTT  Raphanus raphanistrum subsp. landra
EW719707       --> AGATAAGTTCTATATTGGCGTACAATTGATTTCTTCACCATCCTTGTCTT  Raphanus sativus var. oleiformis

               201    -    251
UN15590        --> CATCCTCCATCATCACCAGGTTCTCTATGGTCTCGAGGAACGCCGTGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971019       <-- CATCCTCCATCATCACCAGGTTCTCTATGGTCTCGAGGAACGCCGTGACT
EV569110       <-- CATCCTCCATCATCACCAGGTTCTCTATGGTCTCGAGGAACGCCGTGACT
EW715064       <-- CATCCTCCATCATCACCAGGTTCTCTATGGTCTCGAGGAACGCCGTGACT
EV538375       <-- CATCCTCCATCATCACCAGGTTCTCTATAGTCTCGAGGAACGCCGTGACT
EV551331       <-- CATCCTCCATCATCACCAGGTTCTCTATGGTCTCGAGGAACGCCGTGACT
FD966273       <-- ........ATCATCACCAGGT-CTCTATG-TCTCGAGGA-CGCCGTGACT
EX771889       <-- .....................TCTCTATG-TCTCGAGGAACGCCGTGACT
FD978716       <-- ..................................GAGGAACGCCGTGACT
EV548575       <-- ........................................CGCCGTGACT
EX756881       <-- ...............................................ACT
FD544139       <-- ..................................................
FD966082       <-- ..................................................
FD541334       <-- ..................................................
FD956640       <-- ..................................................
FD981301       <-- ..................................................
EV536304       <-- ..................................................
FD540478       <-- ..................................................
EY948593       <-- ..................................................
EY948732       <-- ..................................................
EY949447       <-- ..................................................
EX770407       <-- ..................................................
EV544220       --> CATCCTCCATCATCACCAGGTTCTCTATGGTCTCGAGGAACGCCGTGACT
EV540785       --> CATCCTCCATCATCACCAGGTTCTCTATGGTCTCGAGGAACGCCGTGACT
EX774510       --> CATCCCCCATCATCACCAGGTTCTCTATGGTCTCGAGGAACGCCGTGACT
EY926610       --> CATCCTCCATCATCACCAGGTTCTCTATGGTCTCGAGGAACGCCGTGACT
EY944266       --> CATCCTCCATCATCACCAGGTTCTCTATGGTCTCGAGGAACGCCGTGACT
EY944380       --> CATCCTCCATCATCACCAGGTTCTCTATGGTCTCGAGGAACGCCGTGACT
EY944961       --> CATCCTCCGTCATCACCAGGTTCTCTATGGTCTCGAGGAACGCCGTGACT
FD537639       --> CATCCTCCATCATCACCAGGTTCTCTATAGTCTCGAGGAACGCCGTGACT
FD977077       --> CATCCTCCATCATCACCAGGTTCTCTATGGTCTCGAGGAACGCCGTGACT
EV542398       --> CATCCTCCATCATCACCAGGTTCTCTATAGTCTCGAGGAACGCCGTGACT
EX760599       --> CATCCTCCATCATCACCAGGTTCTCTATGGTCTCGAGGAACGCCGTGACT
EX775963       --> CATCCTCCATCATCACCAGGTTCTCTATGGTCTCGAGGAACGCCGTGACT
FD536976       --> CATCCTCCATCATCACCAGGTTCTCTATGGTCTCGAGGAACGCCGTGACT
FD539808       --> CATCCTCCATCATCACCAGGTTCTCTATGGTCTCGAGGAACGCCGTGACT
FD952479       --> CATCCTCCATCATCACCAGGTTCTCTATGGTCTCGAGGAACGCCGTGACT
FD974899       --> CATCCTCCATCATCACCAGGTTCTCTATGGTCTCGAGGAACGCCGTGACT
EV573701       --> CATCCTCCATCATCACCAGGTTCTCTATGGTCTCGAGGAACGCCGTGACT
EW719707       --> CATCCTCCATCATCACCAGGTTCTCTATGGTCTCGAGGAACGCCGTGACT

               251    -    301
UN15590        --> TTCACCAAGCTCTTCTCATCAAGCCTGGGGACCGTGTGGCCTTTGGGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971019       <-- TTCACCAAGCTCTTCTCATCAAGCCTGGGGACCGTGTGGCCTTTAGGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569110       <-- TTCACCAAGCTCTTCTCATCAAGTCTGGGGACCGTGTGGCCTTTGGGATG  Raphanus raphanistrum subsp. landra
EW715064       <-- TTCACCAAGCTCTTCTCATCAAGCCTGGGGACCGTGTGGCCTTTGGGATG  Raphanus sativus var. oleiformis
EV538375       <-- TTCACCAAGCTCTTCTCATCAAGCCTAGGGACCGTGTGGCCTTTGGGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV551331       <-- TTCACCAAGCTCTTCTCATCAAGCCTGGGGACCGTGTGGCCTTTGGGATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD966273       <-- T-CACCAAGCTCTTCTCATCAAGTCTGGGGACCGTGTGGCCTTTGGGATG  Raphanus raphanistrum subsp. maritimus
EX771889       <-- TTCACCAAGCTCTTCTCATCAAGTCTGGGGACCGTGTGGCCTTTGGGATG  Raphanus raphanistrum subsp. landra
FD978716       <-- TTCACCAAGCTCT-CTCATCAAGCCTGGGGACCGTGTGGCCTTTTGGATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548575       <-- TTCACCAAGCCCTTCTCATCAAGCCTGGGGACCGTGTGGCCTTTTGGATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX756881       <-- TTCACCAAGCTCTTCTCATCAAGCCTGGGGACCGTGTGGCCTTTAGGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544139       <-- .....CAAGCTCTTCTCATCAAGCCTGGGGACCGTGTGGCCTTTAGGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966082       <-- ..................TCAAGTCTGGGGACCGTGTGGC-TTTGGGATG  Raphanus raphanistrum subsp. maritimus
FD541334       <-- .....................................tggCTTTGGGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD956640       <-- .....................................tggCTTTGGGATG  Raphanus sativus cv Rat-Tail Radish #3870
FD981301       <-- .....................................tggCTTTTGGATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536304       <-- ............................................aGGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540478       <-- .............................................GGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY948593       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY948732       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY949447       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX770407       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV544220       --> TTCACCAAGCCCTTCTCATCAAGCCTGGGGACCGTGTGGCCTTTTGGATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540785       --> TTCACCAAGCTCTTCTCATCAAGCCTGGGGACCGTGTGGCCTTTAGGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX774510       --> TTCACCAAGCTCTTCTCATCAAGCCTGGGGACCGTGTGGCCTTTGGGATG  Raphanus raphanistrum subsp. landra
EY926610       --> TTCACCAAGCTCTTCTCATCAAGCCTGGGGACCGTGTGGCCTTTGGGATG  Raphanus sativus var. oleiformis
EY944266       --> TTCACCAAGCTCTTCTCATCAAGCCTGGGGACCGTGTGGCCTTTGGGATG  Raphanus sativus cv Rat-Tail Radish #3870
EY944380       --> TTCACCAAGCTCTTCTCATCAAGCCTGGGGACCGTGTGGCCTTTGGGATG  Raphanus sativus cv Rat-Tail Radish #3870
EY944961       --> TTCACCAAGCTCTTCTCATCAAGCCTGGGGACCGTGTGGCCTTTGGGATG  Raphanus sativus cv Rat-Tail Radish #3870
FD537639       --> TTCACCAAGCTCTTCTCATCAAGCCTAGGGACCGTGTGGCCTTTGGGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD977077       --> TTCACCAAGCTCTTCTCATCAAGCCTGGGGACCGTGTGGCCTTTTGGATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542398       --> TTCACCAAGCTCTTCTCATCAAGCCTAGGGACCGTGTGGCCTTTGGGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760599       --> TTCACCAAGCTCTTCTCATCAAGCCTGGGGACCGTGTGGCCTTTAGGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX775963       --> TTCACCAAGCTCTTCTCATCAAGTCTGGGGACCGTGTGGCCTTTGGGATG  Raphanus raphanistrum subsp. landra
FD536976       --> TTCACCAAGCTCTTCTCATCAAGCCTGGGGACCGTGTGGCCTTTAGGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539808       --> TTCACCAAGCTCTTCTCATCAAGCCTGGGGACCGTGTGGCCTTTAGGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD952479       --> TTCACCAAGCTCTTCTCATCAAGCCTGGGGACCGTGTGGCCTTTGGGATG  Raphanus sativus cv Rat-Tail Radish #3870
FD974899       --> TTCACCAAGCTCT-CTCATCAAGCCTGGGGACCGTGTGGCCTTTTGGATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573701       --> TTCACCAAGCTCTTCTCATCAAGTCTGGGGACCGTGTGGCCTTTGGGATG  Raphanus raphanistrum subsp. landra
EW719707       --> TTCACCAAGCTCTTCTCATCAAGCCTGGGGACCGTGTGGCCTTTGGGATG  Raphanus sativus var. oleiformis

               301    -    351
UN15590        --> ATGGACTACCACCGGATTCTTGAACGACTCTATCAGCTTGATTCCGTAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971019       <-- ATGGACTGCCACCGGATTCTTGTATGACTCTATCAGCTTGATTCCGTAAG
EV569110       <-- ATGGACTACCACCGGATTCTTGAACGACTCTATCAGCTTGATTCCGTAAG
EW715064       <-- ATGGACTACCACCGGATTCTTGAACGACTCTATCAGCTTGATTCCGTAAG
EV538375       <-- ATGGACTACCACCGGATTCTTGAACGACTCTATCAGCTTGATTCCGTAAG
EV551331       <-- ATGGACTACCACCGGATTCTTGAACGACTCTATCAGCTTGATTCCGTAAG
FD966273       <-- ATGGACTACCACCGGATTCTTGAACGACTCTATCAGCTTGATTCCGTAAG
EX771889       <-- ATGGACTACCACCGGATTCTTGAACGACTCTATCAGCTTGATTCAGTAAG
FD978716       <-- ATGGACTACCACCGGATTCTTGAACGACTCTATCAGCTTGATTCCGTAAG
EV548575       <-- ATGGACTACCACCGGATTCTTGAACGACTCTATCAGCTTGATTCCGTAAG
EX756881       <-- ATGGACTACCACCGGATTCTTGAATGACTCTATCAGCTTGATTCCGTAAG
FD544139       <-- ATGGACTACCACCGGATTCTTGAATGACTCTATCAGCTTGATTCCGTAAG
FD966082       <-- ATGGACTACCACCGGATTCTTGAACGACTCTATCAGCTTGATTCCGTAAG
FD541334       <-- ATGGACTACCACCGGATTCTTGAACGACTCTATCAGCTTGATTCCGTAAG
FD956640       <-- ATGGACTACCACCGGATTCTTGAACGACTCTATCAGCTTGATTCCGTAAG
FD981301       <-- ATGGACTACCACCGGATTCTTGAACGACTCTATCAGCTTGATTCCGTAAG
EV536304       <-- ATGGACTACCACCGGATTCTTGAATGACTCTATCAGCTTGATTCCGTAAG
FD540478       <-- GTGGACTACCACCGGATTCTTGAATGACTCTATCAGCTTGATTCCGTAAG
EY948593       <-- ..................CTTGAACGACTCTATCAGCTTGATTCCGTAAG
EY948732       <-- ...................TTGAACGACTCTATCAGCTTGATTCCGTAAG
EY949447       <-- ................................................AG
EX770407       <-- ..................................................
EV544220       --> ATGGACTACCACCGGATTCTTGAACGACTCTATCAGCTTGATTCCGTAAG
EV540785       --> ATGGACTACCACCGGATTCTTGAATGACTCTATCAGCTTGATTCCGTAAG
EX774510       --> ATGGACTACCACCGGATTCTTGAACGACTCTATCAGCTTGATTCCGTAAG
EY926610       --> ATGGACTACCACCGGATTCTTGAACGACTCTATCAGCTTGATTCCGTAAG
EY944266       --> ATGGACTACCACCGGATTCTTGAACGACTCTATCAGCTTGATTCCGTAAG
EY944380       --> ATGGACTACCACCGGATTCTTGAACGACTCTATCAGCTTGATTCCGTAAG
EY944961       --> ATGGACTACCACCGGATTCTTGAACGACTCTATCAGCTTGATTCCGTAAG
FD537639       --> ATGGACTACCACCGGATTCTTGAACGACTCTATCAGCTTGATTCCGTAAG
FD977077       --> ATGGACTACCACCGGATTCTTGAACGACTCTATCAGCTTGATTCCGTAAG
EV542398       --> ATGGACTACCACCGGATTCTTGAACGACTCTATCAGCTTGATTCCGTAAG
EX760599       --> ATGGACTACCACCGGATTCTTGAATGACTCTATCAGCTTGATTCCGTAAG
EX775963       --> ATGGACTACCACCGGATTCTTGAACGACTCTATCAGCTTGATTCAGTAAG
FD536976       --> GTGGACTACCACCGGATTCTTGAATGACTCTATCAGCTTGATTCCGTAAG
FD539808       --> ATGGACTACCACCGGATTCTTGAATGACTCTATCAGCTTGATTCCGTAAG
FD952479       --> ATGGACTACCACCGGATTCTTGAACGACTCTATCAGCTTGATTCCGTAAG
FD974899       --> ATGGACTACCACCGGATTCTTGAACGACTCTATCAGCTTGATTCCGTAAG
EV573701       --> ATGGACTACCACCGGATTCTTGAACGACTCTATCAGCTTGATTCCGTAAG
EW719707       --> ATGGACTACCACCGGATTCTTGAACGACTCTATCAGCTTGATTCCGTAAG

               351    -    401
UN15590        --> GTTTCAAGAAATCAGTCTCTCCTAGAAAGTGTAGGGAGGGAGTATCAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971019       <-- GTTTCAAGAAATCAGTCTCTCCTAGAAAGTGTAGGGAGGGAGTATCAATG
EV569110       <-- GTTTCAAGAAATCAGTCTCTCCTAGAAAGTGTAGGGAGGGAGTATCAATG
EW715064       <-- GTTTCAAGAAATCAGTCTCTCCTAGAAAGTGTAGGGAGGGAGTATCAATG
EV538375       <-- GTTTCAAGAAATCAGTCTCTCCTAGAAAGTGTAGGGAGGGAGTATCAATG
EV551331       <-- GTTTCAAGAAATCAGTCTCTCCTAGAAAGTGTAGGGAGGGAGTATCAATG
FD966273       <-- GTTTCAAGAAATCAGTCTCTCCTAGAAAGTGTAGGGAGGGAGTATCAATG
EX771889       <-- GTTTCAAGAAATCAGTCTCTCCTAGAAAGTGTAGGGAGGGAGTATCAATG
FD978716       <-- GTTTCAAGAAATCAGTCTCTCCTAGAAAGTGTAGGGAGGGAGTATCAATG
EV548575       <-- GTTTCAAGAAATCAGTCTCTCCTAGAAAGTGTAGGGAGGGAGTATCAATG
EX756881       <-- GTTTCAAGAAATCAGTCTCTCCTAGAAAGTGTAGGGAGGGAGTATCAATG
FD544139       <-- GTTTCAAGAAATCAGTCTCTCCTAGAAAGTGTAGGGAGGGAGTATCAATG
FD966082       <-- GTTTCAAGAAATCAGTCTCTCCTAGAAAGTGTAGGGAGGGAGTATCAATG
FD541334       <-- GTTTCAAGAAATCAGTCTCTCCTAGAAAGTGTAGGGAGGGAGTATCAATG
FD956640       <-- GTTTCAAGAAATCAGTCTCTCCTAGAAAGTGTAGGGAGGGAGTATCAATG
FD981301       <-- GTTTCAAGAAATCAGTCTCTCCTAGAAAGTGTAGGGAGGGAGTATCAATG
EV536304       <-- GTTTCAAGAAATCAGTCTCTCCTAGAAAGTGTAGGGAGGGAGTATCAATG
FD540478       <-- GTTTCAAGAAATCAGTCTCTCCTAGGAAGTGTAGGGAGGGAGTATCAATG
EY948593       <-- GTTTCAAGAAATCAGTCTCTCCTAGAAAGTGTAGGGAGGGAGTATCAATG
EY948732       <-- GTTTCAAGAAATCAGTCTCTCCTAGAAAGTGTAGGGAGGGAGTATCAATG
EY949447       <-- GTTTCAAGAAATCAGTCTCTCCTAGAAAGTGTAGGGAGGGAGTATCAATG
EX770407       <-- .........................AAAGTGTAGGGAGGGAGTATCAATG
EV544220       --> GTTTCAAGAAATCAGTCTCTCCTAGAAAGTGTAGGGAGGGAGTATCAATG
EV540785       --> GTTTCAAGAAATCAGTCTCTCCTAGAAAGTGTAGGGAGGGAGTATCAATG
EX774510       --> GTTTCAAGAAATCAGTCTCTCCTAGAAAGTGTAGGGAGGGAGTATCAATG
EY926610       --> GTTTCAAGAAATCAGTCTCTCCTAGAAAGTGTAGGGAGGGAGTATCAATG
EY944266       --> GTTTCAAGAAATCAGTCTCTCCTAGAAAGTGTAGGGAGGGAGTATCAATG
EY944380       --> GTTTCAAGAAATCAGTCTCTCCTAGAAAGTGTAGGGAGGGAGTATCAATG
EY944961       --> GTTTCAAGAAATCAGTCTCTCCTAGAAAGTGTAGGGAGGGAGTATCAATG
FD537639       --> GTTTCAAGAAATCAGTCTCTCCTAGAAAGTGTAGGGAGGGAGTATCAATG
FD977077       --> GTTTCAAGAAATCAGTCTCTCCTAGAAAGTGTAGGGAGGGAGTATCAATG
EV542398       --> GTTTCAAGAAATCAGTCTCTCCTAGAAAGTGTAGGGAGGGAGTATCAATG
EX760599       --> GTTTCAAGAAATCAGTCTCTCCTAGAAAGTGTAGGGAGGGAGTATCAATG
EX775963       --> GTTTCAAGAAATCAGTCTCTCCTAGAAAGTGTAGGGAGGGAGTATCAATG
FD536976       --> GTTTCAAGAAATCAGTCTCTCCTAGGAAGTGTAGGGAGGGAGTATCAATG
FD539808       --> GTTTCAAGAAATCAGTCTCTCCTAGAAAGTGTAGGGAGGGAGTATCAATG
FD952479       --> GTTTCAAGAAATCAGTCTCTCCTAGAAAGTGTAGGGAGGGAGTATCAATG
FD974899       --> GTTTCAAGAAATCAGTCTCTCCTAGAAAGTGTAGGGAGGGAGTATCAATG
EV573701       --> GTTTCAAGAAATCAGTCTCTCCTAAAAAGTGTAGGGAGGGAGTATCAATG
EW719707       --> GTTTCAAGAAATCAGTCTCTCCTAGAAAGTGTAGGGAGGGAGTATCAATG

               401    -    451
UN15590        --> GAAGGCGAATAAGCATCCTCCACAACCTCGGTAGATCTAAACATAGCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971019       <-- GAAGGCGAATAAGCATCCTCCACAACCTCGGTAGATCTAAACATAGCTCC
EV569110       <-- GAAGGCAAATAAGCATCCTCCACAACCTCGGTAGATCTAAACATAGCTCC
EW715064       <-- GAAGGCGAATGAGCATCCGCCACAACCTCGGTAGATCTAAACATAGCTCC
EV538375       <-- GAAGGCGAATAAGCATCCTCCACAACCTCGGTAGATCTAAACATAGCTCC
EV551331       <-- GAAGGCGAATAAGCATCCTCCACAACCTCGGTAGATCTAAACATAGCTCC
FD966273       <-- GAAGGCGAATAAGCATCCTCCACAACCTCGGTAGATCTAAACATAGCTCC
EX771889       <-- GAAGGCGAATAAGCATCCTCCACAACCTCGGTAGATCTAAACATAGCTCC
FD978716       <-- GAAGGCGAATAAGCATCCTCCACAACCTCGGTAGATCTAAACATAGCTCC
EV548575       <-- GAAGGCGAATAAGCATCCTCCACAACCTCGGTAGATCTAAACATAGCTCC
EX756881       <-- GAAGGCGAATAAGCATCCTCCACAACCTCGGTAGATCTAAACATAGCTCC
FD544139       <-- GAAGGCGAGTAAGCATCCTCCACAACCTCGGTAGATCTAAACATAGCTCC
FD966082       <-- GAAGGCGAATAAGCATCCTCCACAACCTCGGTAGATCTAAACATAGCTCC
FD541334       <-- GAAGGCGAATAAGCATCCTCCACAACCTCGGTAGATCTAAACATAGCTCC
FD956640       <-- GAAGGCGAATAAGCATCCTCCACAACCTCGGTAGATCTAAACATAGCTCC
FD981301       <-- GAAGGCGAATAAGCATCCTCCACAACCTCGGTAGATCTAAACATAGCTCC
EV536304       <-- GAAGGCGAATAAGCATCCTCCACAACCTCGGTAGATCTAAACATAGCTCC
FD540478       <-- GAAGGCGAATAAGCATCCTCCACAACCTCGGTAGATCTAAACATAGCTCC
EY948593       <-- GAAGGCGAATAAGCATCCTCCACAACCTCGGTAGATCTAAACATAGCTCC
EY948732       <-- GAAGGCGAATAAGCATCCTCCACAACCTCGGTAGATCTAAACATAGCTCC
EY949447       <-- GAAGGCGAATAAGCATCCTCCACAACCTCGGTAGATCTAAACATAGCTCC
EX770407       <-- GAAGGCGAATAAGCATCCTCCACAACCTCGGTAGATCTAAACATAGCTCC
EV544220       --> GAAGGCGAATAAGCATCCTCCACAACCTCGGTAGATCTAAACATAGCTCC
EV540785       --> GAAGGCGAATAAGCATCCTCCACAACCTCGGTAGATCTAAACATAGCTCC
EX774510       --> GAAGGCGAATAAGCATCCTCCACAACCTCGGTAGATCTAAACATAGTTCC
EY926610       --> GAAGGCGAATAAGCATCCTCCACAACCTCGGTAGATCTAAACATAGCTCC
EY944266       --> GAAGGCGAATAAGCATCCTCCACAACCTCGGTAGATCTAAACATAGCTCC
EY944380       --> GAAGGCGAATAAGCATCCTCCACAACCTCGGTAGATCTAAACATAGCTCC
EY944961       --> GAAGGCGAATAAGCATCCTCCACAACCTCGGTAGATCTAAACATAGCTCC
FD537639       --> GAAGGCGAATAAGCATCCTCCACAACCTCGGTAGATCTAAACATAGCTCC
FD977077       --> GAAGGCGAATAAGCATCCTCCACAACCTCGGTAGATCTAAACATAGCTCC
EV542398       --> GAAGGCGAATAAGCATCCTCCACAACCTCGGTAGATCTAAACATAGCTCC
EX760599       --> GAAGGCGAATAAGCATCCTCCACAACCTCGGTAGATCTAAACATAGCTCC
EX775963       --> GAAGGCGAATAAGCATCCTCCACAACCTCGGTAGATCTAAACATAGCTCC
FD536976       --> GAAGGCGAATAAGCATCCTCCACAACCTCGGTAGATCTAAACATAGCTCC
FD539808       --> GAAGGCGAGTAAGCATCCTCCACAACCTCGGTAGATCTAAACATAGCTCC
FD952479       --> GAAGGCGAATAAGCATCCTCCACAACCTCGGTAGATCTAAACATAGCTCC
FD974899       --> GAAGGCGAATAAGCATCCTCCACAACCTCGGTAGATCTAAACATAGCTCC
EV573701       --> GAAGGCAAATAAGCATCCTCCACAACCTCGGTAGATCTAAACATAGCTCC
EW719707       --> GAAGGCGAATGAGCATCCGCCACAACCTCGGTAGATCTAAACATAGCTCC

               451    -    501
UN15590        --> TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGGAGTGCAAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971019       <-- TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGGAGTGCAAGTC
EV569110       <-- TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGGAGTGCAAGTC
EW715064       <-- TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGGAGTGCAAGTC
EV538375       <-- TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGGAGTGCAAGTC
EV551331       <-- TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGGAGTGCAAGTC
FD966273       <-- TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGGAGTGCAAGTC
EX771889       <-- TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGGAATGCAAGTC
FD978716       <-- TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGGAGTGCAAGTC
EV548575       <-- TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGGAGTGCAAGTC
EX756881       <-- TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGGAGTGCAAGTC
FD544139       <-- TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGGAGTGCAAGTC
FD966082       <-- TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGGAGTGCAAGTC
FD541334       <-- TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGGAGTGCAAGCC
FD956640       <-- TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGGAGTGCAAGTC
FD981301       <-- TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGGAGTGCAAGTC
EV536304       <-- TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGGAGTGCAAGTC
FD540478       <-- TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGGAGTGCAAGTC
EY948593       <-- TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGGAGTGCAAGCC
EY948732       <-- TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGGAGTGCAAGCC
EY949447       <-- TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGGAGTGCAAGTC
EX770407       <-- TCCAATAATGATGATAAACTTGATCTTTGGCACTTTGTGGAGTGCAAGTC
EV544220       --> TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGGAGTGCAAGTC
EV540785       --> TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGGAGTGCAAGTC
EX774510       --> TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGGAGTGCAAGTC
EY926610       --> TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGG-GTGCAAGTC
EY944266       --> TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGGAGTGCAAGCC
EY944380       --> TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGGAGTGCAAGCC
EY944961       --> TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGGAGTGCAAGTC
FD537639       --> TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGGAGTGCAAGCC
FD977077       --> TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGGAGTGCAAGTC
EV542398       --> TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGGAGTGCAAGTC
EX760599       --> TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGGAGTGCAAGTC
EX775963       --> TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGGAATGCAAGTC
FD536976       --> TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGGAGTGCAAGTC
FD539808       --> TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGGAGTGCAAGTC
FD952479       --> TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGGAGTGCAAGTC
FD974899       --> TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGGAGTGCAAGTC
EV573701       --> TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGGAGTGCAAGTC
EW719707       --> TCCAATAATGATGATAAACTTGATCTTTGGCACTTTCTGGAGTGCAAGTC

               501    -    551
UN15590        --> CCTTAGCTTGCAGTCCTGGTAAGCCCCCAGACAACATTCCCCCCTGAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971019       <-- CCTTAGCTTGTAGTCCTGGTAAGCCCCCAGACAACATTCCCCCCTGAGAG
EV569110       <-- CCTTAGCTTGCAGTCCTGGTAAGCCCCCAGACAACATTCCCCCCTGAGAG
EW715064       <-- CCTTAGCTTGCAGTCCTGGTAAGCCCCCAGACAACATTCCCCCCTGAGAG
EV538375       <-- CCTTAGCTTGCAGTCCTGGTAAGCCCCCAGACAACATTCCCCCCTGAGAG
EV551331       <-- CCTTAGCTTGCAGTCCTGGTAAGCCCCCAGACAACATTCCCCCCTGAGAG
FD966273       <-- CCTTAGCTTGCAGTCCTGGTAAGCCCTCAGACAACATTCCCCCCTGAGAG
EX771889       <-- CCTTAGCTTACAGTCCTGGTAAGCCCCCAGACAACATTCCCCCCTGAGAG
FD978716       <-- CCTTAGCTTGCAGTCCTGGTAAGCCCCCAGACAACATTCCCCCCTGAGAG
EV548575       <-- CCTTAGCTTGCAGTCCTGGTAAGCCCCCAGACAACATTCCCCCCTGAGAG
EX756881       <-- CCTTAGCTTGTAGTCCTGGTAAGCCCCCAGACAACATTCCCCCCTGAGAG
FD544139       <-- CCTTAGCTTGTAGTCCTGGTAAGCCCCCAGACAACATTCCCCCCTGAGAG
FD966082       <-- CCTTAGCTTGCAGTCCTGGTAAGCCCTCAGACAACATTCCCCCCTGAGAG
FD541334       <-- CCTTAGCTTGCAGTCCTGGTAAGCCCCCAGACAACATTCCCCCCTGAGAG
FD956640       <-- CCTTAGCTTGCAGTCCTGGTAAGCCCCCAGACAACATCCCCCCCTGAGAG
FD981301       <-- CCTTAGCTTGCAGTCCTGGTAAGCCCCCAGACAACATTCCCCCCTGAGAG
EV536304       <-- CCTTAGCTTGTAGTCCTGGTAAGCCCCCAGACAACATTCCCCCCTGAGAG
FD540478       <-- CCTTAGCTTGTAGTCCTGGTAAGCCCCCAGACAACATTCCCCCCTGAGAG
EY948593       <-- CCTTAGCTTGCAGTCCTGGTAAGCCCCCAGACAACATCCCCCCCTGAGAG
EY948732       <-- CCTTAGCTTGCAGTCCTGGTAAGCCCCCAGACAACATCCCCCCCTGAGAG
EY949447       <-- CCTTAGCTTGCAGTCCTGGTAAGCCCCCAGACAACATCCCCCCCTGAGAG
EX770407       <-- CCTTAGCTTGCAGTCCTGGTAAGCCCCCAGACAACATTCCCCCCTGAGAG
EV544220       --> CCTTAGCTTGCAGTCCTGGTAAGCCCCCAGACAACATTCCCCCCTGAGAG
EV540785       --> CCTTAGCTTGTAGTCCTGGTAAGCCCCCAGACAACATTCCCCCCTGAGAG
EX774510       --> CCTTAGCTTGCAGTCCTGGTAAGCCTCCAGACAACATTCCCCCCTGAGAG
EY926610       --> CCTTAGCTTGCAGTCCTGGTAAGCCCCCAGACAACATTCCCCCCTGAGAG
EY944266       --> CCTTAGCTTGCAGTCCTGGTAAGCCCCCAGACAACATCCCCCCCTGAGAG
EY944380       --> CCTTAGCTTGCAGTCCTGGTAAGCCCCCAGACAACATCCCCCCCTGAGAG
EY944961       --> CCTTAGCTTGCAGTCCTGGTAAGCCCCCAGACAACATCCCCCCCTGAGAG
FD537639       --> CCTTAGCTTGCAGTCCTGGTAAGCCCCCAGACAACATTCCCCCCTGAGAG
FD977077       --> CCTTAGCTTGCAGTCCTGGTAAGCCCCCAGACAACATTCCCCCCTGAGAG
EV542398       --> CCTTAGCTTGCAGTCCTGGTAAGCCCCCAGACAACATTCCCCCCTGAGAG
EX760599       --> CCTTAACTTGTAGTCCTGGTAAGCCCCCAGACAACATTCCCCCCTGAGAG
EX775963       --> CCTTAGCTTACAGTCCTGGTAAGCCCCCAGACAACATTCCCCCCTGAGAG
FD536976       --> CCTTAGCTTGTAGTCCTGGTAAGCCCCCAGACAACATTCCCCCCTGAGAG
FD539808       --> CCTTAGCTTGTAGTCCTGGTAAGCCCCCAGACAACATTCCCCCCTGAGAG
FD952479       --> CCTTAGCTTGCAGTCCTGGTAAGCCCCCAGACAACATCCCCCCCTGAGAG
FD974899       --> CCTTAGCTTGCAGTCCTGGTAAGCCCCCAGACAACATTCCCCCCTGAGAG
EV573701       --> CCTTAGCTTGCAGTCCTGGTAAGCCCCCAAACAACATTCCCCCCTGAGAG
EW719707       --> CCTTAGCTTGCAGTCCTGGTAAGCCCCCAGACAACATTCCCCCCTGAGAG

               551    -    601
UN15590        --> AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971019       <-- AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA
EV569110       <-- AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA
EW715064       <-- AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA
EV538375       <-- AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA
EV551331       <-- AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA
FD966273       <-- AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA
EX771889       <-- AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA
FD978716       <-- AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA
EV548575       <-- AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA
EX756881       <-- AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA
FD544139       <-- AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA
FD966082       <-- AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA
FD541334       <-- AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA
FD956640       <-- AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA
FD981301       <-- AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA
EV536304       <-- AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA
FD540478       <-- AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA
EY948593       <-- AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA
EY948732       <-- AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA
EY949447       <-- AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA
EX770407       <-- AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA
EV544220       --> AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA
EV540785       --> AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA
EX774510       --> AAACCAATGAGACCATCAAAAGGACCAAGCTTGATCATACGATCTTCCAA
EY926610       --> AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA
EY944266       --> AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA
EY944380       --> AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA
EY944961       --> AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA
FD537639       --> AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA
FD977077       --> AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA
EV542398       --> AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA
EX760599       --> AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA
EX775963       --> AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA
FD536976       --> AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA
FD539808       --> AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA
FD952479       --> AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA
FD974899       --> AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA
EV573701       --> AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA
EW719707       --> AAGCCAATGAGACCATCAAAGGGACCAAGCTTGATCATACGATCTTCCAA

               601    -    651
UN15590        --> ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGAACTCCTTGTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971019       <-- ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGAACTCCTTGTTGA
EV569110       <-- ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGAACTCCTTGTTGA
EW715064       <-- ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGAACTCCTTGTTGA
EV538375       <-- ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGAACTCCTTGTTGA
EV551331       <-- ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGAACTCCTTGTTGA
FD966273       <-- ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGAACTCCTTGTTGA
EX771889       <-- ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGAACTCCTTGTTGA
FD978716       <-- ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGAACTCCTTGTTGA
EV548575       <-- ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGAACTCCTTGTTGA
EX756881       <-- ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGGACTCCTTGTTGA
FD544139       <-- ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGAACTCCTTGTTGA
FD966082       <-- ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGAACTCCTTGTTGA
FD541334       <-- ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGAACTCCTTGTTGA
FD956640       <-- ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGAACTCCTTGTTGA
FD981301       <-- ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGAACTCCTTGTTGA
EV536304       <-- ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGAACTCCTTGTTGA
FD540478       <-- ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGAACTCCTTGTTGA
EY948593       <-- ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGAACTCCTTGTTGA
EY948732       <-- ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGAACTCCTTGTTGA
EY949447       <-- ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGAACTCCTTGTTGA
EX770407       <-- ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGAACTCCTTGTTGA
EV544220       --> ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGAACTCCTTGTTGA
EV540785       --> ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGAACTCCTTGTTGA
EX774510       --> GTACTCCAAACAGTTCTCAAAATTCTCATACTCAGTGAACTCCTTGTTGA
EY926610       --> ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGAACTCCTTGTTGA
EY944266       --> ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGAACTCCTTGTTGA
EY944380       --> ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGAACTCCTTGTTGA
EY944961       --> ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGAACTCCTTGTTGA
FD537639       --> ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGAACTCCTTGTTGA
FD977077       --> ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGAACTCCTTGTTGA
EV542398       --> ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGAACTCCTTGTTGA
EX760599       --> ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGGACTCCTTGTTGA
EX775963       --> ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGAACTCCTTGTTGA
FD536976       --> ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGAACTCCTTGTTGA
FD539808       --> ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGAACTCCTTGTTGA
FD952479       --> ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGAACTCCTTGTTGA
FD974899       --> ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGAACTCCTTGTTGA
EV573701       --> ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGAACTCCTTGTTGA
EW719707       --> ATACTCTAAACAGTTCTCAAAATTCTCATACTCAGTGAACTCCTTGTTGA

               651    -    701
UN15590        --> ATTGGAACCACTCGTAATAAGGAGGATCGAAGATTCCGTCGACATCAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971019       <-- ATTGGAACCACTCGTAATAAGGAGGATCGAAGATTCCGTCGACATCAGAT
EV569110       <-- ATTGGAACCACTCGTAATAAGGAGGATCGAAGATTCCGTCGACATCAGAT
EW715064       <-- ATTGGAACCACTCGTAATAAGGAGGATCGAAGATTCCATCGACATCAGAT
EV538375       <-- ATTGGAACCACTCGTAATAAGGAGGATCGAAGATTCCGTCGACATCAGAT
EV551331       <-- ATTGGAACCACTCGTAATAAGGAGGATCGAAGATTCCGTCGACATCAGAT
FD966273       <-- ATTGGAACCACTCGTAATAAGGAGGATCGAAGATTCCGTCGACATCAGAT
EX771889       <-- ATTGGAACCACTCGTAATAAGGAGGATCGAAGATTCCGTCGACATCAGAT
FD978716       <-- ATTGGAACCACTCGTAATAAGGAGGATCGAAGATTCCGTCGACATCAGAT
EV548575       <-- ATTGGAACCACTCGTAATAAGGAGGATCGA-GATTCCGTCGACATCAGAT
EX756881       <-- ATTGGAACCACTCGTAATAAGGAGGATCGAAGATTCCGTCGACATCAGAT
FD544139       <-- ATTGGAACCACTCGTAATAAGGAGGATCGAAGATTCCGTCGACATCAGAT
FD966082       <-- ATTGGAACCACTCGTAATAAGGAGGATCGAAGATTCCGTCGACATCAGAT
FD541334       <-- ATTGGAACCACTCGTAATAAGGAGGATCGAAGATTCCGTCGACATCAGAT
FD956640       <-- ATTGGAACCACTCGTAATAAGGAGGATCGAAGATTCCGT-GACATCAGAT
FD981301       <-- ATTGGAACCACTCGTAATAAGGAGGATCGAAGATTCCGTCGACATCAGAT
EV536304       <-- ATTGGAACCACTCGTAATAAGGAGGATCGAAGATTCCGTCGACATCAGAT
FD540478       <-- ATTGGAACCACTCGTAATAAGGAGGATCGAAGATTCCGTCGACATCAGAT
EY948593       <-- ATTGGAACCACTCGTAATAAGGAGGATCGAAGATTCCGTCGACATCAGAT
EY948732       <-- ATTGGAACCACTCGTAATAAGGAGGATCGAAGATTCCGTCGACATCAGAT
EY949447       <-- ATTGGAACCACTCGTAATAAGGAGGATCGAAGATTCCGTCGACGTCAGAT
EX770407       <-- ATTGGAACCACTCGTAATAAGGAGGATCGAAGATTCCGTCGACATCAGAT
EV544220       --> ATTGGAACCACTCGTAATAAGGAGGATCGA-GATTCCGTCGACA......
EV540785       --> ATTGGAACCACTCGTAATAAGGAGGATCGAAGATTCCGTCGACA......
EX774510       --> ATTGGAACCACTCGTAATAAGGAGGA........................
EY926610       --> ATTGGAACCACTCGTAA.................................
EY944266       --> ATTGGAACCACT......................................
EY944380       --> ATTGGAACCACTCGTAATAAGGAGGATCGAAGATTCCGT...........
EY944961       --> ATTGGA............................................
FD537639       --> ATTGGAACCACTCGTAATAAGGAGGATCGAAGATTCCGTCGACATCAGAT
FD977077       --> ATTGGAACCAC.......................................
EV542398       --> ATTGGAACCACTCGTAATAAGGAGGATCGAAGATTCCGTCGACATCAGAT
EX760599       --> ATTGGAACCACTCGTAATAAGGAGGATCGAAGATTCCGTCGACATC....
EX775963       --> ATTGGAACCACTCGTAA.................................
FD536976       --> ATTGGAACCACTCGTAATAAGGAGGATCGAAGATTCCGTCGACATCAGAT
FD539808       --> ATTGGAACCACTCGTAATAAGGAGGATCGAAGATTCCGTCGACATCAGAT
FD952479       --> ATTGGAACCACTCGTAATAAGGAGG.........................
FD974899       --> ATTGGAACCACTCGTAATAAGGAGGATCGAAGATTCCGTCGACATCAGAT
EV573701       --> ATTGGAACCACTCGTAATAAGGAGGA........................
EW719707       --> ATTGGAACCACTCGTAATAAGGAGGATCGAAGATTCCATCGACATCAGAT

               701    -    751
UN15590        --> TTGCCTTGACAAGGAAATGGTGCGTCTAGGAACACGAGATCGAGTCTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971019       <-- TTGCCTTGACAAGGAAATGGTGCGTCTAGGAACACGAGATCGAGTCTGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569110       <-- TTACCTTGACAAGGAAATGGTGCGTCTAGGAACACGAGATCGAGTCTGTC  Raphanus raphanistrum subsp. landra
EW715064       <-- TTGCCTTGACAAGGAAAAGGCGTGTCTAGGAACACGAGATCGAGTCTGTC  Raphanus sativus var. oleiformis
EV538375       <-- TTGCCTTGACAAGGAAATGGTGCGTCTAGGAACACGAGATCGAGTCTGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV551331       <-- TTGCCTTGACAAGGAAATGGTGCGTCTAGGAACACGAGATCGAGTCTGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD966273       <-- TTACCTTGACAAGGAAATGGTGCGTCTAGGAACACGAGATCGAGTCTGTC  Raphanus raphanistrum subsp. maritimus
EX771889       <-- TTACCTTGACAAGGAAATGGTGCGTCTAGGAACACGAGATCGAGTCTGTC  Raphanus raphanistrum subsp. landra
FD978716       <-- TTGCCTTGACAAGGAAAAGGTGCGTCTAGGAACACGAGATCGAGTCTGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548575       <-- TTGCCTTGACAAGGAAATGGTGCGTCTAGGAACACGAGATCGAGTCTGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX756881       <-- TTGCCTTGACAAGGAAATGGTGCGTCTAGGAACACGAGATCGAGTCTGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544139       <-- TTGCCTTGACAAGGAAATGGTGCGTCTAGGAACACGAGATCGAGTCTGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966082       <-- TTACCTTGACAAGGAAATGGTGCGTCTAGGAACACGAGATCGAGTCTGTC  Raphanus raphanistrum subsp. maritimus
FD541334       <-- TTGCCTTGACAAGGAAATGGTGCGTCTAGGAACACGAGATCGAGTCTGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD956640       <-- TTGCCTTGACAAGGAAATGGTGCGTCTAGGAACACGAGATCGAGTCTGTC  Raphanus sativus cv Rat-Tail Radish #3870
FD981301       <-- TTGCCTTGACAAGGAAATGGTGCGTCTAGGAACACGAGA-AGAGTCTGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536304       <-- TTGCCTTGACAAGGAAATGGTGCGTCTAGGAACACGAGATCGAGTCTGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540478       <-- TTGCCTTGACAAG-AAATGGTGCGTCTAGGAACACGAGATCGAGTCTGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY948593       <-- TTGCCTTGACAAGGAAATGGTGCGTCTAGGAACACGAGATCGAGTCTGTC  Raphanus sativus cv Rat-Tail Radish #3870
EY948732       <-- TTGCCTTGACAAGGAAATGGTGCGTCTAGGAACACGAGATCGAGTCTGTC  Raphanus sativus cv Rat-Tail Radish #3870
EY949447       <-- TTGCCTTGACAAGGAAATGGTGCGTCTAGGAACACGAGATCGAGTCTGTC  Raphanus sativus cv Rat-Tail Radish #3870
EX770407       <-- TTACCTTGACAAGGAAATGGTGCGTCTAGGAACACGAGATCGAGTCTGTC  Raphanus raphanistrum subsp. landra
EV544220       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540785       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX774510       --> ..................................................  Raphanus raphanistrum subsp. landra
EY926610       --> ..................................................  Raphanus sativus var. oleiformis
EY944266       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY944380       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY944961       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD537639       --> TTGCCTTGACAAGGAAATGGTGCGTCTAGGAACACGAGATCGAGTCTGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD977077       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542398       --> TTGCCTTGACAAGGAAATGGTGCGTCTAGGAACACGAGATCGAGTCTGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760599       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX775963       --> ..................................................  Raphanus raphanistrum subsp. landra
FD536976       --> TTGCCTTGACAAG-AAATGGTGCGTCTAGGAACACGAGATCGAGTCTGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539808       --> TTGCCTTGACAAGGAAATGGTGCGTCTAGGAAC.................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD952479       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD974899       --> TTGCCTTGACAAGGAAAAGGTGCGTC........................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573701       --> ..................................................  Raphanus raphanistrum subsp. landra
EW719707       --> TTGCCTTGACAAGGAAAAGGCGTGTCTAGGAACACGAGATCGAGTCTGTC  Raphanus sativus var. oleiformis

               751    -    801
UN15590        --> GATAATAGCTTTAGGCCATCTGTGAAGCTGTATCTTCATTATCTCTCCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971019       <-- GATAATAGCTTTAGGCCATCTGTGAAGCTGTATCTTCATTATATCTCCGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569110       <-- GATAATAGCTTTAGGCCATCTGTGAAGCTGTATCTTCATTATCTCTCCGC  Raphanus raphanistrum subsp. landra
EW715064       <-- GATAACAGACTTAGGCCATCc.............................  Raphanus sativus var. oleiformis
EV538375       <-- GATAATAGCTTTAGGCCATCTGTGAAGCTGTATCTTCATTATCTCTCCGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV551331       <-- GATAACAGCTTTAGGCCATCTGTGAAGCTGTATCTTCATTATCTCTCCGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD966273       <-- GATAATAGCTTTAGGCCATCTGTGAAGCTGTATCTTCATTATCTCTCCGC  Raphanus raphanistrum subsp. maritimus
EX771889       <-- GATAATAGCTTTAGGCCATCTGTGAAGCTGTATCTTCATTACCTCTCCGC  Raphanus raphanistrum subsp. landra
FD978716       <-- GATGACAGCTTTAGGCCACCTGTGAAGCTGTATCTTCATTATCTCTCCGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548575       <-- GATGACAGCTTTAGGCCACCTGTGAAGCTGTATCTTCATTATCTCTCCGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX756881       <-- GATAATAGCTTTAGGCCATCTGTGAAGCTGTATCTTCATTATCTCTCCGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544139       <-- GATAATAGCTTTAGGCCATCTGTGAAGCTGTATCTTCATTATCTCTCCGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966082       <-- GATAATAGCTTTAGGCCATCTGTGAAGCTGTATCTTCATTATCTCTCCGC  Raphanus raphanistrum subsp. maritimus
FD541334       <-- GATAATAGCTTTAGGCCATCTGTGAAGCTGTATCTTCATTATCTCTCCGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD956640       <-- GATAACAGCTTTAGGCCATCTGTGAAGCTGTATCTTCATTATCTCTCCGC  Raphanus sativus cv Rat-Tail Radish #3870
FD981301       <-- GATGACAGCTTTAGGCCACCTGTGAAGCTGTATCTTCATTATCTCTCCGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536304       <-- GATAATAGCTTTAGGCCATCTGTGAAGCTGTATCTTCATTATCTCTCCGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540478       <-- GATAATAGCTTTAGGCCATCTGTGAAGCTGTATCTTCATTATCTCTCCGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY948593       <-- GATAACAGCTTTAGGCCATCTGTGAAGCTGTATCTTCATTATCTCTCCGC  Raphanus sativus cv Rat-Tail Radish #3870
EY948732       <-- GATAACAGCTTTAGGCCATCTGTGAAGCTGTATCTTCATTATCTCTCCGC  Raphanus sativus cv Rat-Tail Radish #3870
EY949447       <-- GATAACAGCTTTAGGCCATCTGTGAAGCTGTATCTTCATTATCTCTCCGC  Raphanus sativus cv Rat-Tail Radish #3870
EX770407       <-- GATAATAGCTTTAGGCCATCTGTGAAGCTGTATCTTCATTATCTCTCCGC  Raphanus raphanistrum subsp. landra
EV544220       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540785       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX774510       --> ..................................................  Raphanus raphanistrum subsp. landra
EY926610       --> ..................................................  Raphanus sativus var. oleiformis
EY944266       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY944380       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY944961       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD537639       --> GATAATAGCT........................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD977077       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542398       --> GATAATAGCTTTAGGCCATCTGTGAAGCTGTATCTTCATTATCTCTCCGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760599       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX775963       --> ..................................................  Raphanus raphanistrum subsp. landra
FD536976       --> GATAATAGCTTTAGGCCATCTGTGAAGCTGT...................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539808       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD952479       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD974899       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573701       --> ..................................................  Raphanus raphanistrum subsp. landra
EW719707       --> GATAACAGACTTAGGCCATCc.............................  Raphanus sativus var. oleiformis

               801    -    851
UN15590        --> TCGTACGGAACCCATGGAGACATAGAAACCTTGGTTTCCTCACTATTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971019       <-- TCGTACGGAACCCc....................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569110       <-- TCGTACGGAACCCATGGAGACACAGAAACCTTGGTTTCCTCACTATTGAT  Raphanus raphanistrum subsp. landra
EW715064       <-- ..................................................  Raphanus sativus var. oleiformis
EV538375       <-- TCGTACGGAACCCATGGAGACATAGAAACCTTGGCTTCCTCACTATTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV551331       <-- TCGTACGGAACCCATGGAGACATAGAAACCTTGGTTTCCTCGCTATCGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD966273       <-- TCGTACGGAACCCATGGAGACACAGAAACCTTGGTTTCCTCACTATTGAT  Raphanus raphanistrum subsp. maritimus
EX771889       <-- TCGTACG-AACCCATGGAGACACAGAAACCTTGGTTTCCTCACTATTGAT  Raphanus raphanistrum subsp. landra
FD978716       <-- TCGTACGGAACCCATGGAGACATAGAAACCTTGGTTTCCTCACTATTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548575       <-- TCGTACGGAACCCATGGAGACATAGAAACCTTGGTTTCCTCACTATTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX756881       <-- TCGTACGGAACCCATGGAGACACAGAAACCTTGGTTTCCTCGCTACCGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544139       <-- TCGTACGGAACCCATGGAGACACAGAAACCTTGGTTTCCTCGCTACCGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966082       <-- TCGTACGGAACCCATGGAGACACAGAAACCTTGGTTTCCTCACTATTGAT  Raphanus raphanistrum subsp. maritimus
FD541334       <-- TCGTACGGAACCCATGGAGACATAGAAACCTTGGCTTCCTCACTATTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD956640       <-- CCGTACGGAACCCATGGAGACATAGAAACCTTGGTTTCCTCACTATTGAT  Raphanus sativus cv Rat-Tail Radish #3870
FD981301       <-- TCGTACGGAACCCATGGAGACATAGAAACCTTGGTTTCCTCACTATTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536304       <-- TCGTACGGAACCCATGGAGACACAGAAACCTTGGTTTCCTCGCTACCGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540478       <-- TCGTACGGAACCCATGGAGACACAGAAACCTTGGTTTTCTCGCTACCGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY948593       <-- TCGTACGGAACCCATGGAGACATAGAAACCTTGGTTTCCTCACTATTGAT  Raphanus sativus cv Rat-Tail Radish #3870
EY948732       <-- TCGTACGGAACCCATGGAGACATAGAAACCTTGGTTTCCTCACTATTGAT  Raphanus sativus cv Rat-Tail Radish #3870
EY949447       <-- TCGTACGGAACCCATGGAGACATAGAAACCTTGGTTTCCTCACTATTGAT  Raphanus sativus cv Rat-Tail Radish #3870
EX770407       <-- TCGTACGGAACCCATGGAGACACAGAAACCTTGGTTTCCTCACTATTGAT  Raphanus raphanistrum subsp. landra
EV544220       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540785       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX774510       --> ..................................................  Raphanus raphanistrum subsp. landra
EY926610       --> ..................................................  Raphanus sativus var. oleiformis
EY944266       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY944380       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY944961       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD537639       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD977077       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542398       --> TCGTACGGAACCCATGGAGACATAGAAACCTTGGCTTCCTCACTATTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760599       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX775963       --> ..................................................  Raphanus raphanistrum subsp. landra
FD536976       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539808       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD952479       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD974899       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573701       --> ..................................................  Raphanus raphanistrum subsp. landra
EW719707       --> ..................................................  Raphanus sativus var. oleiformis

               851    -    901
UN15590        --> CCTCCTTCGCTTCCCATTTGTTT-TTTTTT-TT-TCAGACAATAAGTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971019       <-- ..................................................
EV569110       <-- CCTCCTTCGCTTCCCATTTGTTT-TTTTTT-T..................
EW715064       <-- ..................................................
EV538375       <-- CCTCCTTCGCTTCCCATTTGTTT-TTTTT---T-CAAGACAATAAGTTCA
EV551331       <-- CCTCCTTGGCTTCCCATTTGTTT-TTTT----T-TCAGACAA-ACGTTCA
FD966273       <-- CCTCCTTCGCTTCCCATTTGTTT-TTTTTT-TT--CAGACAATAAGTTCA
EX771889       <-- CCTCCTTCGCTTCCCATTTGTTT-TTTTTT----TCAGACAATAAGTTCA
FD978716       <-- CCTCCTTCGCTTCCCATTTGTTT-TTTTTT-TT-TCAGACAATAAGTTCA
EV548575       <-- CCTCCTTCGCTTCCCATTTGTTT-TTTTTT-TT-TCAGACAATAAGTTCA
EX756881       <-- CCTCCTTCGCTTCCCATTTGTTTCTTTTTTATT-TCAGACAA-ACGTTCA
FD544139       <-- CCTCCTTCGCTTCCCATTTGTTTCTTTTTTATT-TTAGACAA-ACGTTCA
FD966082       <-- CCTCCTTCGCTTCCCATTTGTTT-TTTTTT-TT--CAGACAATAAGTTCA
FD541334       <-- CCTCCTTCGCTTCCCATTTGTTT-TTTTTT-T--CAAGACAATAAGTTCA
FD956640       <-- CCTCCTTCGCTTCCCATTTGTTT-TTTTTT-TC-TCAGACAATAAGTTCA
FD981301       <-- CCTCCTTCGCTTCCCATTTGTTT-TTTTTT-TT-TCAGACAATAAGTTCA
EV536304       <-- CCTCCTTCGCTTCCCATTTGTTTCTTTTTTATT-TCAGACAA-ACGTTCA
FD540478       <-- CCTCCTTCGCTTCCCATTTGTTT-CTTTTT-TT-TCAGACAA-ACGTTCA
EY948593       <-- CCTCCTTCGCTTCCCATTTGTTT-TTTTTT-TTCTCAGACAATAAGTTCA
EY948732       <-- CCTCCTTCGCTTCCCATTTGTTT-TTTTTT-TTCTCAGACAATAAGTTCA
EY949447       <-- CCTCCTTCGCTTCCCATTTGTTT-TTTTTT-TC-TCAGACAATAAGTTCA
EX770407       <-- CCTCCTTCGCTTCCCATTTGTTT-TTTTTT-TT-TCAGACAATAAGTTCA
EV544220       --> ..................................................
EV540785       --> ..................................................
EX774510       --> ..................................................
EY926610       --> ..................................................
EY944266       --> ..................................................
EY944380       --> ..................................................
EY944961       --> ..................................................
FD537639       --> ..................................................
FD977077       --> ..................................................
EV542398       --> CCTCCTTCGCTTCCCATTTGTTT-TTTTTT----CAAGACAATAAGTT..
EX760599       --> ..................................................
EX775963       --> ..................................................
FD536976       --> ..................................................
FD539808       --> ..................................................
FD952479       --> ..................................................
FD974899       --> ..................................................
EV573701       --> ..................................................
EW719707       --> ..................................................

               901    -    951
UN15590        --> CAGTTT-GGTCTTTCTTGTGATAAAGCTCTGTCTTCTTCT-T-CTTGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971019       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569110       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW715064       <-- ..................................................  Raphanus sativus var. oleiformis
EV538375       <-- CAGTTT-GGTCTTTGTTGTGATAAAGCTCTGTCTTCTTCT-Tgcttccc.  Raphanus raphanistrum subsp. raphanistrum (MS)
EV551331       <-- CAGTTTTGGTCTCTCT-GTTATAAAGCTCTGTCTTCTTCT-Tgcttcc..  Raphanus raphanistrum subsp. raphanistrum (NY)
FD966273       <-- CAGTTT-GGTCTTTCTTGTGATAAA-CTCTGTTTTCTTCT-Tgcttctc.  Raphanus raphanistrum subsp. maritimus
EX771889       <-- CAGTTT-GGTCTTTCTTGTGATAAA-CTCTG--TT-TTCT-T-CTTGCTT  Raphanus raphanistrum subsp. landra
FD978716       <-- CAGTTT-GGTCTTTCTTGTGGTAAAGCTCTGTCTGCTTCT-Tgcttcc..  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548575       <-- CAGTTT-GGTCTTTCTTGTGATAAAGCTCTGTCTTCTTCT-Tgcttc...  Raphanus raphanistrum subsp. raphanistrum (NY)
EX756881       <-- CAGTTTTGGTCTCTCCTGTGATAAAGCTCTGTCTTCTTCTAG-CTTGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544139       <-- CAGTTTTGGTCTCTCCTGTGATAAAGCTCTGTCTTCTTCTagcttcc...  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966082       <-- CAGTTT-GGTCTTTCTTGTGATAAA-CTCTGTTTTCTTCT-Tgcttctc.  Raphanus raphanistrum subsp. maritimus
FD541334       <-- CAGTTT-GGTCTTTGTTGTGATAAAGCTCTGTCTTCTTCT-TGCTTGCTc  Raphanus raphanistrum subsp. raphanistrum (MS)
FD956640       <-- CAGTTT-GGTCTTTCTTGTGATAAAGCTCTGTCTTCTTCT-T-CT.....  Raphanus sativus cv Rat-Tail Radish #3870
FD981301       <-- CAGTTT-GGTCTTTCTTGTGATAAAGCTCTGTCTTCTTCT-TGCTTGCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV536304       <-- CAGTTTTGGTCTCTCCTGTGATAAAGCTCTGTCTTCTTCTagcttcc...  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540478       <-- CAGTTTTGGTCTCTCCTGTGATAAAGCTCTGTCTTCTTCTagcttcc...  Raphanus raphanistrum subsp. raphanistrum (MS)
EY948593       <-- CAGTTT-GGTCTTTCTTGTGATAAAGCTCTGTCTTCTTCT-T-CTTGCTT  Raphanus sativus cv Rat-Tail Radish #3870
EY948732       <-- CAGTTT-GGTCTTTCTTGTGATAAAGCTCTGTCTTCTTCT-T-CTTGCTT  Raphanus sativus cv Rat-Tail Radish #3870
EY949447       <-- CAGTTT-GGTCTTTCTTGTGATAAAGCTCTGTCTTCTTCT-T-CTTGCTT  Raphanus sativus cv Rat-Tail Radish #3870
EX770407       <-- CAGTTT-GGTCTTTCTTGTGATAAA-CTCTGTTTTCTTCT-Tgcttcc..  Raphanus raphanistrum subsp. landra
EV544220       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540785       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX774510       --> ..................................................  Raphanus raphanistrum subsp. landra
EY926610       --> ..................................................  Raphanus sativus var. oleiformis
EY944266       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY944380       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY944961       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD537639       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD977077       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV542398       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760599       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX775963       --> ..................................................  Raphanus raphanistrum subsp. landra
FD536976       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539808       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD952479       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD974899       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV573701       --> ..................................................  Raphanus raphanistrum subsp. landra
EW719707       --> ..................................................  Raphanus sativus var. oleiformis

               951    -   1001
UN15590        --> GCTTTCCCC
                   ~~~~~~~~~
FD971019       <-- .........
EV569110       <-- .........
EW715064       <-- .........
EV538375       <-- .........
EV551331       <-- .........
FD966273       <-- .........
EX771889       <-- GCTTTCCC.
FD978716       <-- .........
EV548575       <-- .........
EX756881       <-- tcc......
FD544139       <-- .........
FD966082       <-- .........
FD541334       <-- ttcc.....
FD956640       <-- .........
FD981301       <-- ttcc.....
EV536304       <-- .........
FD540478       <-- .........
EY948593       <-- GCTTTCCCC
EY948732       <-- GCTTTCCCC
EY949447       <-- cc.......
EX770407       <-- .........
EV544220       --> .........
EV540785       --> .........
EX774510       --> .........
EY926610       --> .........
EY944266       --> .........
EY944380       --> .........
EY944961       --> .........
FD537639       --> .........
FD977077       --> .........
EV542398       --> .........
EX760599       --> .........
EX775963       --> .........
FD536976       --> .........
FD539808       --> .........
FD952479       --> .........
FD974899       --> .........
EV573701       --> .........
EW719707       --> .........