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Alignment for radish unigene UN15671

               1      -     51
UN15671        --> GACCTTTGAGCACTGAGATTGAAGAGTTCTTGAGAGTTACTTGTTGTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX901908       <-- ..................................................
FD944825       <-- ..................................................
FD967564       <-- ..................................................
EX777153       <-- ..................................................
EY894792       <-- ..................................................
EY895411       <-- ..................................................
EY899701       --> GACCTTTGAGCACTGAGATTGAAGAGTTCTTGAGAGTTACTTGTTGTTGC
EX763829       --> ..................................................
EX773355       --> ..................................................
FD542613       --> ..................................................
EX898318       --> ..................................................
EY898852       --> ..................................................
EY917171       --> ..................................................

               51     -    101
UN15671        --> TTTGTGGTCCAAGGCTACGGTCTGACGGAGACGCTTGGAGGAACGGCAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX901908       <-- ..................................................
FD944825       <-- ..................................................
FD967564       <-- ..................................................
EX777153       <-- ..................................................
EY894792       <-- ..................................................
EY895411       <-- ..................................................
EY899701       --> TTTGTGGTCCAAGGCTACGGTCTGACGGAGACGCTTGGAGGAACGGCAAT
EX763829       --> ..................................................
EX773355       --> ..................................................
FD542613       --> ..................................................
EX898318       --> ..................................................
EY898852       --> ..................................................
EY917171       --> ..................................................

               101    -    151
UN15671        --> GGGCTTCCCGGACGAGATGTGTATGCTAGGGACAGTCGGTATTCCGGCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX901908       <-- ..................................................
FD944825       <-- ..................................................
FD967564       <-- ..................................................
EX777153       <-- ..................................................
EY894792       <-- ..................................................
EY895411       <-- ..................................................
EY899701       --> GGGCTTCCCGGACGAGATGTGTATGCTAGGGACAGTCGGTATACCGGCGG
EX763829       --> ........CGGACGAGATGTGTATGCTAGGGACAGTCGGTATTCCGGCGG
EX773355       --> ..................................................
FD542613       --> ..................................................
EX898318       --> ..................................................
EY898852       --> ..................................................
EY917171       --> ..................................................

               151    -    201
UN15671        --> TTTACAACGAGATACGGCTTGAGGAGGTGGCTGAAATGGGCTACGACCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX901908       <-- ..................................................
FD944825       <-- ..................................................
FD967564       <-- ..................................................
EX777153       <-- ..................................................
EY894792       <-- ..................................................
EY895411       <-- ..................................................
EY899701       --> TTTACAACGAGATACGGCTTGAGGAGGTGGCTGAAATGGGCTACGACCCA
EX763829       --> TTTACAACGAGATACGGCTTGAGGAGGTGGCTGAAATGGGCTACGACCCA
EX773355       --> ..............gGGCTTGAGGAGGTGGCTGAAATGGGCTACGACCCA
FD542613       --> ..................................................
EX898318       --> ..................................................
EY898852       --> ..................................................
EY917171       --> ..................................................

               201    -    251
UN15671        --> CTTGGTGAAAATCCAGCAGGCGAGATCTGTATAAGAGGAAAATGCCTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX901908       <-- ..................................................
FD944825       <-- ..................................................
FD967564       <-- ..................................................
EX777153       <-- ..................................................
EY894792       <-- ..................................................
EY895411       <-- ..................................................
EY899701       --> CTTGGTGAAAATCCAGCAGGCGAGATCTGTATAAGAGGAAAATGTCTGTT
EX763829       --> CTTGGTGAAAATCCAGCAGGCGAGATCTGTATAAGAGGAAAATGCCTGTT
EX773355       --> CTTGGTGAAAATCCAGCAGGCGAGATCTGTATAAGAGGAAAATGCCTGTT
FD542613       --> ...............................TAAGAGGAAAATGTCTGTT
EX898318       --> ......................................gAAATGCCTGTT
EY898852       --> ..................................................
EY917171       --> ..................................................

               251    -    301
UN15671        --> TTCTGGTTATTACAAGAATCCCGAGCTTACTCAAGAAGTCATGAAAGACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX901908       <-- .......TATTACAAGAATCCCGAGCTTACTCAAGAAGTCATGAAAGACG
FD944825       <-- .........aTACAAGAATCCCGAGCTTACTCAAGAAGTCATGAAAGACG
FD967564       <-- .......................................CATGAAAGACG
EX777153       <-- ..................................................
EY894792       <-- ..................................................
EY895411       <-- ..................................................
EY899701       --> TTCTGGTTATTACAAGAACCCTGAACTTACTCAAGAAGTCA.........
EX763829       --> TTCTGGTTATTACAAGAATCCTGAGCTTACTCAAGAAGTCATGAAAGACG
EX773355       --> TTCTGGTTATTACAAGAATCCCGAGCTTACTCAAGAAGTCATGAAAGACG
FD542613       --> TTCTGGTTATTACAAGAACCCTGAACTTACTCAAGAAGTCATGAAAGACG
EX898318       --> TTCTGGTTATTACAAGAATCCCGAGCTTACTCAAGAAGTCATGAAAGACG
EY898852       --> ..................................................
EY917171       --> ..................................................

               301    -    351
UN15671        --> GATGGTTCCATACAGGAGATATTGGTGAGATTCAATCAAATGGAGTACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX901908       <-- GATGGTTCCATACAGGAGATATTGGTGAGATTCAATCAAATGGAGTACTT
FD944825       <-- GATGGTTCCATACAGGAGATATTGGTGAGATTCAATCAAATGGAGTACTT
FD967564       <-- GATGGTTCCATACAGGAGATATTGGTGAGATTCAATCAAATGGAGTACTT
EX777153       <-- ...........................AGATTCAATCAAATGGAGTACTT
EY894792       <-- ..................................................
EY895411       <-- ..................................................
EY899701       --> ..................................................
EX763829       --> GATGGTTCCATACAGGAGATATTGGTGAGATTCAATCAAATGGAGTACTT
EX773355       --> GATGGTTCCATACAGGAGATATTGGTGAGATTCAATCAAATGGAGTACTT
FD542613       --> GATGGTTCCATACAGGAGATATTGGTGAGATTCAATCAAATGGAGTACTT
EX898318       --> GATGGTTCCATACAGGAGATATTGGTGAGATTCAATCAAATGGAGTACTT
EY898852       --> .............gGGAGATATTGGTGAGATTCAATCAAATGGAGTACTT
EY917171       --> ..................................................

               351    -    401
UN15671        --> AAGATAATTGATCGTAAAAAGAATCTTATCAAACTCTCTCAAGGAGAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX901908       <-- AAGATAATTGATCGTAAAAAGAATCTTATCAAACTCTCTCAAGGAGAATA
FD944825       <-- AAGATAATTGATCGTAAAAAGAATCTTATCAAACTCTCTCAAGGAGAATA
FD967564       <-- AAGATAATTGATCGTAAAAAGAATCTTATCAAACTCTCTCAAGGAGAATA
EX777153       <-- AAGATAATTGATCGTAAAAAGAATCTTATCAAACTCTCTCAAGGAGAATA
EY894792       <-- ..............................................AATA
EY895411       <-- ..................................................
EY899701       --> ..................................................
EX763829       --> AAGATAATTGATCGTAAAAAGAATCTTATCAAACTCTCTCAAGGAGAATA
EX773355       --> AAGATAATTGATCGTAAAAAGAATCTTATCAAACTCTCTCAAGGAGAATA
FD542613       --> AAGATAATTGATCGTAAAAAGAATCTTATCAAACTCTCTCAAGGAGAATA
EX898318       --> AAGATAATTGATCGTAAAAAGAATCTTATCAAACTCTCTCAAGGAGAATA
EY898852       --> AAGATAATTGATCGTAAAAAGAATCTTATCAAACTCTCTCAAGGAGAATA
EY917171       --> ..................................................

               401    -    451
UN15671        --> CGTTGCTCTTGAGAACTTGGAAAATATCTACGGTCAAAACTCTCTTGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX901908       <-- CGTTGCTCTTGAGAACTTGGAAAATATCTACGGTCAAAACTCTCTTGTCC
FD944825       <-- CGTTGCTCTTGAGAACTTGGAAAATATCTACGGTCAAAACTCTCTTGTCC
FD967564       <-- CGTTGCTCTTGAGAACTTGGAAAATATCTACGGTCAAAACTCTCTTGTCC
EX777153       <-- CGTTGCTCTTGAGAACTTGGAAAATATCTACGGTCAAAACTCTCTTGTCC
EY894792       <-- CGTTGCTCTTGAGAACTTGGAAAATATCTACGGTCAAAACTCTCTTGTCC
EY895411       <-- ..................................................
EY899701       --> ..................................................
EX763829       --> CGTTGCTCTTGAGAACTTGGAAAATATCTACGGTCAAAACTCTCTTGTCC
EX773355       --> CGTTGCTCTTGAGAACTTGGAAAATATCTACGGTCAAAACTCTCTTGTCC
FD542613       --> CGTTGCTCTTGAGAACTTGGAAAATATCTACGGTCAAAACTCTCTTGTCC
EX898318       --> CGTTGCTCTTGAGAACTTGGAAAATATCTACGGTCAAAACTCTCTTGTCC
EY898852       --> CGTTGCTCTTGAGAACTTGGAAAATATCTACGGTCAAAACTCTCTTGTCC
EY917171       --> ..................................................

               451    -    501
UN15671        --> AAGATATATGGGTTTATGGAGACAGCTTCAAATCGATGCTTGTCGCGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX901908       <-- AAGATATATGGGTTTATGGAGACAGCTTCAAATCTATGCTTGTCGCGGTG
FD944825       <-- AAGATATATGGGTTTATGGAGACAGCTTCAAATCGATGCTTGTCGCGGTG
FD967564       <-- AAGATATATGGGTTTATGGAGACAGCTTCAAATCGATGCTTGTCGCGGTG
EX777153       <-- AAGATATATGGGTTTATGGAGACAGCTTCAAATCGATGCTTGTCGCGGTG
EY894792       <-- AAGATATATGGGTTTATGGAGACAGCTTCAAATCGATGCTTGTTGCGGTG
EY895411       <-- ..................................................
EY899701       --> ..................................................
EX763829       --> AAGATATATGGGTTTATGGAGACAGCTTCAAATCGATGCTTGTCGCGGTG
EX773355       --> AAGATATATGGGTTTATGGAGACAGCTTCAAATCGATGCTTGTCGCGGTG
FD542613       --> AAGATATATGGGTTTATGGAGACAGCTTCAAATCGATGCTTGTCGCGGTG
EX898318       --> AAGATATATGGGTTTATGGAGACAGCTTCAAATCTATGCTTGTCGCGGTG
EY898852       --> AAGATATATGGGTTTATGGAGACAGCTTCAAATCGATGCTTGTTGCGGTG
EY917171       --> ......gggGGGTTTATGGAGACAGCTTCAAATCGATGCTTGTCGCGGTG

               501    -    551
UN15671        --> ATTGTTCCAAACCAAGAAACCGTTAAACGTTGGGCTAAAGAACTTGGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX901908       <-- ATTGTTCCAAACCAAGAAACCGTTAAACGTTGGGCTAAAGAACTTGGTTT
FD944825       <-- ATTGTTCCAAACCAAGAAACCGTTAAACGTTGGGCTAAAGAACTTGGTTT
FD967564       <-- ATTGTTCCAAACCAAGAAACCGTTAAACGTTGGGCTAAAGAACTTGGTTT
EX777153       <-- ATTGTTCCAAACCAAGAAACCGTTAAACGTTGGGCTAAAGAACTTGGTTT
EY894792       <-- ATTGTTCCAAACCAAGAAACCGTAAAACGTTGGGCTAGAGAACTTGGTTT
EY895411       <-- ..................................................
EY899701       --> ..................................................
EX763829       --> ATTGTTCCAAACCAAGAAACCGTTAAACGTTGGGCTAAAGAACTTGGTTT
EX773355       --> ATTGTTCCAAACCAAGAAACCGTTAAACGTTGGGCTAAAGAACTTGGTTT
FD542613       --> ATTGTTCCAAACCAAGAAACCGTTAAACGTTGGGCTAAAGAACTTGGTTT
EX898318       --> ATTGTTCCAAACCAAGAAACCGTTAAACGTTGGGCTAAAGAACTTGGTTT
EY898852       --> ATTGTTCCAAACCAAGAAACCGTAAAACGTTGGGCTAGAGAACTTGGTTT
EY917171       --> ATTGTTCCAAACCAAGAAACCGTTAAACGTTGGGCTAAAGAACTTGGTTT

               551    -    601
UN15671        --> TACTAAACCATTCGAAGAACTATGTTCTCTCTCTGAGTTACAAGAGCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX901908       <-- TACTAAACCATTCGAAGAACTATGTTCTCTCTCTGAGTTACAAGAGCACA
FD944825       <-- TACTAAACCATTCGAAGAACTATGTTCTCTCTCTGAGTTACAAGAGCACA
FD967564       <-- TACTAAACCATTCGAAGAACTATGTTCTCTCTCTGAGTTACAAGAGCACA
EX777153       <-- TACTAAACCATTCGAAGAACTATGTTCTCTTTCTGAGTTACAAGAGCACA
EY894792       <-- TACTAAACCATTCGAAGAACTATGTTCTCTCTCTGAGTTACAAGAGCACA
EY895411       <-- ........................................CAAGAGCACA
EY899701       --> ..................................................
EX763829       --> TACTAAACCATTCGAAGAACTATGTTCTCTCTCTGAGTTACAAGAGCACA
EX773355       --> TACTAAACCATTCGAAGAACTATGTTCTCTCTCTGAGTTACAAGAGCACA
FD542613       --> TACTAAACCATTCGAAGAACTATGTTCTCTCTCTGAGTTACAAGAGCACA
EX898318       --> TACTAAACCATTCGAAGAACTATGTTCTCTCTCTGAGTTACAAGAGCACA
EY898852       --> TACTAAACCATTCGAAGAACTATGTTCTCTCTCTGAGTTACAAGAGCACA
EY917171       --> TACTAAACCATTCGAAGAACTATGTTCTCTCTCTGAGTTACAAGAGCACA

               601    -    651
UN15671        --> TCATTTCAGAACTGAAGTCCACGGCAGAGAAGAACAAGCTAAGAAAGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX901908       <-- TCATTTCAGAACTGAAGTCCACGGCAGAGAAGAACAAGCTAAGAAAGTTT
FD944825       <-- TCATTTCAGAACTGAAGTCCACGGCAGAGAAGAACAAGCTAAGAAAGTTT
FD967564       <-- TCATTTCAGAACTGAAGTCCACGGCAGAGAAGAACAAGCTAAGAAAGTTT
EX777153       <-- TCATTTCAGAACTGAAGTCCACGGCAGAGAAGAACAAGCTAAGAAAGTTT
EY894792       <-- TCATTTCAGAACTGAAGTCCACGGCAGAGAAGAACAAGCTAAGAAAGTTT
EY895411       <-- TCATTTCAGAACTGAAGTCCACGGCAGAGAAGAACAAGCTAAGAAAGTTT
EY899701       --> ..................................................
EX763829       --> TCATTTCAGAACTGAAGTCCACGGCAGAGAAGAACAAGCTAAGAAAGTTT
EX773355       --> TCATTTCAGAACTGAAGTCCACGGCAGAGAAGAACAAGCTAAGAAAGTTT
FD542613       --> TCATTTCAGAACTGAAGTCCACGGCAGAGAAGAACAAGCTAAGAAAGTTT
EX898318       --> TCATTTCAGAACTGAAGTCCACGGCAGAGAAGAACAAGCTAAGAAAGTTT
EY898852       --> TCATTTCAGAACTGAAGTCCACGGCAGAGAAGAACAAGCTAAGAAAGTTT
EY917171       --> TCATTTCAGAACTGAAGTCCACGGCAGAGAAGAACAAGCTAAGAAAGTT-

               651    -    701
UN15671        --> GAGTACATCAAAGCAGTGACGGTGGAGACAAAACCTTTCGATGTAGCGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX901908       <-- GAGTACATCAAAGCAGTGACGGTGGAGACAAAACCTTTCGATGTAGCGAG
FD944825       <-- GAGTACATCAAAGCAGTGACGGTGGAGACAAAACCTTTCGATGTAGCGAG
FD967564       <-- GAGTACATCAAAGCAGTGACGGTGGAGACAAAACCTTTCGATGTAGCGAG
EX777153       <-- GAGTACATCAAAGCAGTGACGGTGGAGACAAAACCTTTCGATGTAGCAAG
EY894792       <-- GAGTACATCAAAGCAGTGACGGTGGAGACAAAACCTTTCGATGTAGCGAG
EY895411       <-- GAGTACATCAAAGCAGTGACGGTGGAGACAAAACCTTTCGATGTAGCGAG
EY899701       --> ..................................................
EX763829       --> GAGTACATCAAAGCAGTGACGGTGGAGACAAAACCTTTCGATGTAGCGAG
EX773355       --> GAGTACATCAAAGCAGTGACGGTGGAGACAAAACCTTTCGATGTAGCAAG
FD542613       --> GAGTACATCAAAGCAGTGACGGTGGAGACAAAACCTTTCGATGTAGCGAG
EX898318       --> GAGTACATCAAAGCAGTGACGGTGGAGACAAAACCTTTCGATGTAGCGAG
EY898852       --> GAGTACATCAAAGCAGTGACGGTGGAGACAAAACCTTTCGATGTAGCGAG
EY917171       --> GAGTACATCAAAGCAGTGACGGTGGAGACAAAACCTTTCGATGTA-CGAG

               701    -    751
UN15671        --> AGACTTAGTGACTGCAACGCTCAAGAACCGGAGGAACAACCTGCTCAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX901908       <-- AGACTTAGTTACTGCAACGCTCAAGAACCGGAGGAACAACCTGCTCAAGT  Raphanus sativus cv Early Scarlet Globe
FD944825       <-- AGACTTAGTTACTGCAACGCTCAAGAACCGGAGGAACAACCTGCTCAAGT  Raphanus sativus cv Early Scarlet Globe
FD967564       <-- AGACTTAGTGACTGCAACGCTCAAGAACCGGAGGAACAACCTGCTCAAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX777153       <-- AGACTTAGTGACTGCAACGCTCAAAAACCGGAGGAACAACCTGCTCAAGT  Raphanus raphanistrum subsp. landra
EY894792       <-- AGACTTAGTGACTGCAACGCTCAAGAACCGGAGGAACAACCTGCTCAAGT  Raphanus raphanistrum subsp. maritimus
EY895411       <-- AGACTTAGTGACTGCAACGCTCAAGAACCGGAGGAACAACCTGCTCAAGT  Raphanus raphanistrum subsp. maritimus
EY899701       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX763829       --> AGACTTAGTTACTGCAACGCTCAAGAACCGGAGGAACA-CCTGCTCAAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773355       --> AGACTTAGTGACTGCAACGCTCAAAAACCGGAGGAACAACCTGCTCAAGT  Raphanus raphanistrum subsp. landra
FD542613       --> AGACTTAGTGACTGCAACGCTCAAGAACCGGAGGAACAACCTGCTCAAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX898318       --> AGACTTAGTTACTGCAACGCTCAAGAACCGGAGGAACAACCTGCTCAAGT  Raphanus sativus cv Early Scarlet Globe
EY898852       --> AGACTTAGTGACTGCAACGCTCAAGAACCGGAGGAACAACCTGCTCAAGT  Raphanus raphanistrum subsp. maritimus
EY917171       --> AGACTTA-TTACTGCAACGCTCAAGAACCGGAGGAACAACCTGCTCAAGT  Raphanus raphanistrum subsp. raphanistrum (NY)

               751    -    801
UN15671        --> ATTATCAGGTACACGTCGAGGAGATGTACCGAAAATTGGCGTCAGAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX901908       <-- ATTATCAGGTACACGTCGAGGAGATGTACCGAAAATTGGCGTCAGAGAAA  Raphanus sativus cv Early Scarlet Globe
FD944825       <-- ATTATCAGGTACACGTCGAGGAGATGTACCGAAAATTGGCGTCAGAGAAA  Raphanus sativus cv Early Scarlet Globe
FD967564       <-- ATTATCAGGTACACGTCGAGGAGATGTACCGAAAATTGGCGTCAGAGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX777153       <-- ATTATCAGGTACACGTCGACGAGATGTACCGAAAATTGGCGTCAAAGAAA  Raphanus raphanistrum subsp. landra
EY894792       <-- ATTATCAGGTACACGTCGACGAGATGTACCGAAAATTGGCGTCAGAGAAA  Raphanus raphanistrum subsp. maritimus
EY895411       <-- ATTATCAGGTACACGTCGACGAGATGTACCGAAAATTGGCGTCAGAGAAA  Raphanus raphanistrum subsp. maritimus
EY899701       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX763829       --> ATTATCAG-TACACGTCGAGGAGATGTACCGAAAATTGGCGTCAGAGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773355       --> ATTATCAGGTACACGTCGACGAGATGTACCGAAAATTGGCGTCAAAGAAA  Raphanus raphanistrum subsp. landra
FD542613       --> ATTATCAGGTACACGTCGAGGAGATGTACCGAAAATTGGCGTCAGAGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX898318       --> ATTATCAGGTACACGTCGAGGAGATGTACCGAAAATTGGCGTCAGAGAAA  Raphanus sativus cv Early Scarlet Globe
EY898852       --> ATTATCAGGTACACGTCGACGAGATGTACCGAAAATTGGCGTCAGAGAAA  Raphanus raphanistrum subsp. maritimus
EY917171       --> ATTATCAGGTACACGTCGAGGAGATG-ACCGAAAATTGGCG-CAGAGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)

               801    -    851
UN15671        --> ATCTGAAAGTGTTGCGATGAGGTGTGTGCGCTAATATTGATAATTATGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX901908       <-- ATCTGAAAGTGTTGCGATGAGGTGTGTGCGCTAATATTGATAATTATGTT
FD944825       <-- ATCTGAAAGTGTTGCGATGAGGTGTGTGCGCTAATATTGATAATTATGTT
FD967564       <-- ATCTGAAAGTGTTGCGATGAGTTGTGTGCGCTAATATTGATAATTATGTT
EX777153       <-- ATCTGAAAGTGTTGCGATGAGGTGTGTGCGCTACTATTGATAATTATGTT
EY894792       <-- ATCTGAAATTGTTGCGATGAGGTGTGTGCGCTAATATTGATTATTATGTT
EY895411       <-- ATCTGAAATTGTTGCGATGAGGTGTGTGCGCTAATATTGATTATTATGTT
EY899701       --> ..................................................
EX763829       --> -TCTGAA-GTGTTGCGATGAG-TGTGTGCGCTA-TATTGATA-TTATGT-
EX773355       --> ATCTGAAAGTGTTGCGATGAGGTGTGTGCGCTACTATTGATAATTATGTT
FD542613       --> ATCTGAAAGTGTTGCGATGAGTTGTGTGCGCTAATATTGATAATTATGTT
EX898318       --> ATCTGAAAGTGTTGCGATGAGGTGTGTGCGCTAATATTGATAATTATGTT
EY898852       --> ATCTGAAATTGTTGCGATGAGGTGTGTGCGCTAATATTGATTATTATGTT
EY917171       --> ATCTG.............................................

               851    -    901
UN15671        --> ATATATAATACCAATAATTGATAGACATGAGCCTTATGGTTTCTGTAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX901908       <-- ATATATAATACCAATAATTGATAGACATGAGCCTTATGGTTTCTGTAATG
FD944825       <-- ATATATAATACCAATAATTGATAGACATGAGCCTTATAGTTTTTGCAATG
FD967564       <-- ATATATAATACCAAAAATTGATAGACATGAGCCTTATGGTTTCTGTAATG
EX777153       <-- ATATATAATACCAATAATTGATAGACATGAGCCTTATGGTTTCTGTAATG
EY894792       <-- ATATATAATACCAATAATTGATAGACATGAGCCTTATGGTTTCTGTAATG
EY895411       <-- ATATATAATACCAATAATTGATAGACATGAGCCTTATGGTTTCTGTAATG
EY899701       --> ..................................................
EX763829       --> ATATATA-TA-CAATAA-TGATAGACAT......................
EX773355       --> ATATATAATACCAATAATTGATAGACATGAGCCTTATGGTTTCTGTA-TG
FD542613       --> ATATATAATACCAAAAATTGATAGACATGAGCCTTATGGTTTCTGTAATG
EX898318       --> ATATATAATACCAATAATTGATAGACATGAGCCTTATGGTTTCTGTAATG
EY898852       --> ATATATAATACCAATAATTGATAGACATGAGCCTTATGGTTTCTGTAATG
EY917171       --> ..................................................

               901    -    951
UN15671        --> AAGATAAAGATGAGAAAACTCCTAT----CTTCGTTTGATACAGTTTAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX901908       <-- AAGATAAAGATGAGAAAACTCCTATATATGTTCGTTTGATACAGTTTAGT  Raphanus sativus cv Early Scarlet Globe
FD944825       <-- AAGATAAAGATGAGAAAACTCCTATATATGTTCGTTTGATACAGTTTAGT  Raphanus sativus cv Early Scarlet Globe
FD967564       <-- AAGATAAAGATGAGAAAACTCCTATATATGTTCGTTTAATACAGTTTAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX777153       <-- AAGATAAAGATGAGAAAACTCCTAT----CTTCGTTTGATACAGTTTAAT  Raphanus raphanistrum subsp. landra
EY894792       <-- AAGATAAAGATGAGAAAACTCCTAT----CTTCGTTTGATACAGTTTAGT  Raphanus raphanistrum subsp. maritimus
EY895411       <-- AAGATAAAGATGAGAAAACTCCTAT----CTTCGTTTGATACAGTTTAGT  Raphanus raphanistrum subsp. maritimus
EY899701       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX763829       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773355       --> AAGATAAAGATGAGAAA-CTCCTAT----CTTCGTTTGATACAGTTTA-T  Raphanus raphanistrum subsp. landra
FD542613       --> AAGATAAAGATGAGAAAACTCCTA..........................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX898318       --> AAGATAAAGATGAGAAA-CTCCTATATATGTTCGTTTGATACAGTTTAGT  Raphanus sativus cv Early Scarlet Globe
EY898852       --> AAGATAAAGATGAGAAAACTCCTAT----CTTCGTTTGATACAGTTTAGT  Raphanus raphanistrum subsp. maritimus
EY917171       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               951    -   1001
UN15671        --> ACGTCATGCATGTAAGTTGTAACAAGGGTAGTTGATGAAGCAACTTATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX901908       <-- ACGTCATGCATGTAAGTTGTAACAAGGGTAGTTGATGAAGCAACTTATTC  Raphanus sativus cv Early Scarlet Globe
FD944825       <-- ACGTCATGCATGTAAGTTGTAACAAGGGTAGTTGATGAAGCAACTTATTC  Raphanus sativus cv Early Scarlet Globe
FD967564       <-- ACGTCATGCATGTAAGTTGTAACAAGGGTAGTTGATGAAGCAACTTATTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX777153       <-- ACGTCATGCATGTAAGTTGTAACAAGGGTAGTTGATGAAGCAACTTATTC  Raphanus raphanistrum subsp. landra
EY894792       <-- ACGTCATGCATGTAAGTTGTAACAAGGGTAGTTGATGAAGCAACTTATTT  Raphanus raphanistrum subsp. maritimus
EY895411       <-- ACGTCATGCATGTAAGTTGTAACAAGGGTAGTTGATGAAGCAACTTATTT  Raphanus raphanistrum subsp. maritimus
EY899701       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX763829       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773355       --> ACGTCATGCATGTA-GTTGTA-CAAGGGTAGTTGATGAAGCA-CTTATTC  Raphanus raphanistrum subsp. landra
FD542613       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX898318       --> ACGTCATGCATGTAAGTTGTAACAAGGGTAGTTGATG.............  Raphanus sativus cv Early Scarlet Globe
EY898852       --> ACGTCATGCATGTAAGTTGTAACAAGGGTAGTTGATGAAGCAACTTATTT  Raphanus raphanistrum subsp. maritimus
EY917171       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               1001   -   1051
UN15671        --> ATAAAAGTCTATGGTAGTAGACATTTAGTTCTCTTTGTTAATGAACCTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX901908       <-- ATAAAAGTCTATGGTAGTAGGTATTTGGTT....................  Raphanus sativus cv Early Scarlet Globe
FD944825       <-- ATAAAAGTCTATGGTAGTAGGCATTTGGTTCTCTTTGTTAATGAAACTAA  Raphanus sativus cv Early Scarlet Globe
FD967564       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX777153       <-- ATAAGAGTCTATGGTAGTACACATTTGGTTCACTTTGTTAATGAACGTAA  Raphanus raphanistrum subsp. landra
EY894792       <-- ATAAAAGTCTATGGTAGTAGACATTTAGTTCcc.................  Raphanus raphanistrum subsp. maritimus
EY895411       <-- ATAAAAGTCTATGGTAGTAGACATTTAGTTCTCTTTGTTAATGAACCTAA  Raphanus raphanistrum subsp. maritimus
EY899701       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX763829       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773355       --> ATAAGAGTCT........................................  Raphanus raphanistrum subsp. landra
FD542613       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX898318       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY898852       --> ATAAAAGTCTATGGTAGTAGACATTTAGTTCcc.................  Raphanus raphanistrum subsp. maritimus
EY917171       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               1051   -   1101
UN15671        --> AAGGAAGGGTTAAGGTATTAACAAGTTAATGTCTTACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX901908       <-- ......................................
FD944825       <-- AAAGAAGGGTTAAGGTATTAACAAGTTAATGTCTcg..
FD967564       <-- ......................................
EX777153       <-- AAGGAAGGGTTAAGGTATTAACAAGTTAActagac...
EY894792       <-- ......................................
EY895411       <-- AAGGAAGGGTTAAGGTATTAACAAGTTAATGTCTTACC
EY899701       --> ......................................
EX763829       --> ......................................
EX773355       --> ......................................
FD542613       --> ......................................
EX898318       --> ......................................
EY898852       --> ......................................
EY917171       --> ......................................