1      -     51
UN15688        --> GGAATCCTTATGGTGAACAGTCTCCCTCTCTCTCTCTATCCACCTTCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911620       <-- ............................ggacggtgaacagtctccCTCT
FD960203       <-- ..................................................
FD581263       <-- ..................................................
EY912693       <-- ..................................................
EX907233       <-- ..................................................
FD968888       <-- ..................................................
EX903160       --> GGAATCCTTATGGTGAACAGTCTCCCTCTCCCTCTCTATCCACCTTCTCT
FD988737       --> GGAATCCTTATGGTGAACAGTCTCCCTCTCTCTCT--ATCCACCTTCTCT
EX903101       --> .......ggATGGTGAACAGTCTCCCTCTCTCTCTCTATCCACCTTCTCT
EY947427       --> .......ggATGGTGAACAGTCTCCCTCTCTCTCTCTATCCACCTTCTCT
EY915851       --> ............................ggacggtgaacagtctccCTCT
FD964085       --> ..................................................
FD572335       --> ..................................................
FD973143       --> ..................................................
FD568647       --> ..................................................

               51     -    101
UN15688        --> CTCTCT--TTAGCTATTGATTGTT----GATTTCTCTCTCACACACACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911620       <-- CTCTCT--TTAGCTATTGATTGTT----GATTTCTCTCTCACACACACAC
FD960203       <-- .....................................gggACACACA-AC
FD581263       <-- ..................................................
EY912693       <-- ..................................................
EX907233       <-- ..................................................
FD968888       <-- ..................................................
EX903160       --> CTCTCT--TTAGCTATTGATTGTT----GATTTCTCTCTCACACACACAC
FD988737       --> CTCTCTCTTTAGCTATTGATTGTTTGTTGATTTCTCTCTCACACACACAC
EX903101       --> CTCTCT--TTAGCTATTGATTGTT----GATTTCTCTCTCACACACACAC
EY947427       --> CTCTCT--TTAGCTATTGATTGTT----GATTTCTCTCTCACACACACAC
EY915851       --> CTCTCT--TTAGCTATTGATTGTT----GATTTCTCTCTCACACACACAC
FD964085       --> .....................................gggACACACA-AC
FD572335       --> ..........................................ggACACAC
FD973143       --> ..................................................
FD568647       --> ..................................................

               101    -    151
UN15688        --> ACACCTAACCTTATCATTTCACCTGAAACTCTTGCACGATCCAGACCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911620       <-- A--CCTAACCTTATCATTTCACCTGAAACTCTTCCACGATCCAGGCCATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD960203       <-- ACACCTAACCTTATCATTTCACCTGAAACTCTTGCACGATCCAGACCATG  Raphanus raphanistrum subsp. maritimus
FD581263       <-- ..........................AACTCTTGCACGATCCAGACCATG  Raphanus sativus cv Rat-Tail Radish #3870
EY912693       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX907233       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD968888       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX903160       --> AC--CTAACCTTATCATTTCACCTGAAACTCTTGCACGATCCAGACCATG  Raphanus sativus cv Rat-Tail Radish #3870
FD988737       --> ACACCTAACCTTATCATTTCACCTGAAACTCTTGCACGATCCAGGCCATG  Raphanus raphanistrum subsp. landra
EX903101       --> ACACCTAACCTTATCATTTCACCTGAAACTCTTGCACGATCCAGACCATG  Raphanus sativus cv Rat-Tail Radish #3870
EY947427       --> ACACCTAACCTTATCATTTCACCTGAAACTCTTGCACGATCCAGACCATG  Raphanus sativus cv Rat-Tail Radish #3870
EY915851       --> AC--CTAACCTTATCATTTCACCTGAAACTCTTCCACGATCCAGGCCATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964085       --> ACACCTAACCTTATCATTTCACCTGAAACTCTTGCACGATCCAGACCATG  Raphanus raphanistrum subsp. maritimus
FD572335       --> ACACCTAACCTTATCATTTCACCTGAAACTCTTGCACGATCCAGGCCATG  Raphanus sativus cv Early Scarlet Globe
FD973143       --> .......................................ggaAGACCATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD568647       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               151    -    201
UN15688        --> ACTACGGAGGAAGCTAAGGTCGTCGTGCCGAGGAACTTTAGATTGTTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911620       <-- ACTACGGAGGAAGCTAAGGTCGTCGTTCCGAGGAACTTTAGATTGTTGGA
FD960203       <-- ACTACGGAGGAAGCTAAGGTCGTCGTGCCAAGGAACTTTAGATTGTTGGA
FD581263       <-- ACTACGGAGGAAGCTAAGGTCGTCGTGCCGAGGAACTTTAGATTGTTGGA
EY912693       <-- ..................................................
EX907233       <-- ..................................................
FD968888       <-- ..................................................
EX903160       --> ACTACGGAGGAAGCTAAGGTCGTCGTGCCGAGGAACTTTAGATTGTTGGA
FD988737       --> ACTACGGAGGAAGCTAAGGTCGTCGTGCCGAGGAACTTTAGATTGTTGGA
EX903101       --> ACTACGGAGGAAGCTAAGGTCGTCGTGCCGAGGAACTTTAGATTGTTGGA
EY947427       --> ACTACGGAGGAAGCTAAGGTCGTCGTGCCGAGGAACTTTAGATTGTTGGA
EY915851       --> ACTACGGAGGAAGCTAAGGTCGTCGTTCCGAGGAACTTTAGATTGTTGGA
FD964085       --> ACTACGGAGGAAGCTAAGGTCGTCGTGCCAAGGAACTTTAGATTGTTGGA
FD572335       --> ACTACGGAGGAAGCTAAGGTCGTCGTGCCGAGGAACTTTAGATTGTTGGA
FD973143       --> ACTACGGAGGAAGCTAAGGTCGTCGTGCCGAGGAACTTTAGATTGTTGGA
FD568647       --> ..................................................

               201    -    251
UN15688        --> GGAGCTAGAGAGAGGTGAGAAAGGGATCGGAGATGGTACGGTAAGCTATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911620       <-- GGAGCTAGAGAGAGGTGAGAAAGGGATCGGAGATGGTACGGTAAGCTATG
FD960203       <-- GGAGCTGGAGAGAGGTGAGAAAGGGATCGGAGATGGTACGGTAAGCTATG
FD581263       <-- GGAGCTAGAGAGAGGTGAGAAAGGGATCGGAGATGGTACGGTAAGCTATG
EY912693       <-- ..................................................
EX907233       <-- ..................................................
FD968888       <-- ..................................................
EX903160       --> GGAGCTAGAGAGAGGTGAGAAAGGGATCGGAGATGGTACGGTAAGCTATG
FD988737       --> GGAGCTAGAGAGAGGTGAGAAAGGGATCGGAGATGGTACCGTAAGCTATG
EX903101       --> GGAGCTAGAGAGAGGTGAGAAAGGGATCGGAGATGGTACGGTAAGCTATG
EY947427       --> GGAGCTAGAGAGAGGTGAGAAAGGGATCGGAGATGGTACGGTAAGCTATG
EY915851       --> GGAGCTAGAGAGAGGTGAGAAAGGGATCGGAGATGGTACGGTAAGCTATG
FD964085       --> GGAGCTGGAGAGAGGTGAGAAAGGGATCGGAGATGGTACGGTAAGCTATG
FD572335       --> GGAGCTAGAGAGAGGTGAGAAAGGGATCGGAGATGGTACCGTAAGCTATG
FD973143       --> GGAGCTAGAGAGAGGAGAGAAAGGGATCGGAGATGGAACTGTAAGCTATG
FD568647       --> ...GCTAGAGAGAGGTGAGAAAGGGATCGGAGATGGTACGGTAAGCTATG

               251    -    301
UN15688        --> GAATGGACGATGCTGATGATATCTATATGCAGTCCTGGACTGGCACCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911620       <-- GAATGGACGATGCTGATGATATCTATATGCAGTCCTGGACTGGCACCATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD960203       <-- GAATGGATGATGCTGATGATATCTATATGCAGTCCTGGACTGGCACCATT  Raphanus raphanistrum subsp. maritimus
FD581263       <-- GAATGGACGATGCTGATGATATCTATATGCAGTCCTGGACTGGCACCATT  Raphanus sativus cv Rat-Tail Radish #3870
EY912693       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX907233       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD968888       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX903160       --> GAATGGACGATGCTGATGATATCTATATGCAGTCCTGGACTGGCACCATT  Raphanus sativus cv Rat-Tail Radish #3870
FD988737       --> GAATGGATGATGCTGATGATATCTATATGCAGTCCTGGACTGGCACCATT  Raphanus raphanistrum subsp. landra
EX903101       --> GAATGGACGATGCTGATGATATCTATATGCAGTCCTGGACTGGCACCATT  Raphanus sativus cv Rat-Tail Radish #3870
EY947427       --> GAATGGACGATGCTGATGATATCTATATGCAGTCCTGGACTGGCACCATT  Raphanus sativus cv Rat-Tail Radish #3870
EY915851       --> GAATGGACGATGCTGATGATATCTATATGCAGTCCTGGACTGGCACCATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964085       --> GAATGGATGATGCTGATGATATCTATATGCAGTCCTGGACTGGCACCATT  Raphanus raphanistrum subsp. maritimus
FD572335       --> GAATGGATGATGCTGATGATATCTATATGCAGTCCTGGACTGGCACCATT  Raphanus sativus cv Early Scarlet Globe
FD973143       --> GAATGGACGATGCTGATGATATCTATATGCAGTCCTGGACTGGCACCATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD568647       --> GAATGGACGATGCTGATGATATCTATATGCAGTCCTGGACTGGCACCATT  Raphanus sativus cv Early Scarlet Globe

               301    -    351
UN15688        --> CTCGGCCCTCACAATACTGCATACGAAGGGAAAATCTTCCAGCTGAAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911620       <-- CTCGGCCCTCACAATACTGCATACGAAGGGAAAATCTTCCGGCTGAAGCT
FD960203       <-- CTCGGCCCTCACAATACTGCATACGAAGGAAAAATCTTCCAGCTGAAGCT
FD581263       <-- CTCGGCCCTCACAATACTGCATACGAAGGGAAAATCTTCCAGCTGAAGCT
EY912693       <-- .................................ATCTTCCAGCTGAAGCT
EX907233       <-- ..................................................
FD968888       <-- ..................................................
EX903160       --> CTCGGCCCTCACAATACTGCATACGAAGGGAAAATCTTCCAGCTGAAGCT
FD988737       --> CTCGGCCCTCACAATACTGCATACGAAGGGAAAATCTTCCAGCTGAAGCT
EX903101       --> CTCGGCCCTCACAATACTGCATACGAAGGGAAAATCTTCCAGCTGAAGCT
EY947427       --> CTCGGCCCTCACAATACTGCATACGAAGGGAAAATCTTCCAGCTGAAGCT
EY915851       --> CTCGGCCCTCACAATACTGCATACGAAGGGAAAATCTTCCGGCTGAAGCT
FD964085       --> CTCGGCCCTCACAATACTGCATACGAAGGAAAAATCTTCCAGCTGAAGCT
FD572335       --> CTCGGCCCTCACAATACTGCATACGAAGGGAAAATCTTCCAGCTGAAGCT
FD973143       --> CTCGGCCCTCACAATACTGCATACGAAGGGAAAATCTTCCAGCTGAAGCT
FD568647       --> CTCGGCCCTCACAATACTGCATACGAAGGGAAAATCTTCCAGCTGAAGCT

               351    -    401
UN15688        --> CTTCTGTGGCAAGGAATACCCTGAAAGTCCACCAACTGTCAGGTTCCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911620       <-- CTTCTGTGGCAAGGAATACCCTGAAAGTCCACCAACTGTCAGGTTCCAGA
FD960203       <-- CTTCTGTGGCAAGGAGTACCCTGAAAGTCCACCAACTGTCAGGTTCCAGA
FD581263       <-- CTTCTGTGGCAAGGAATACCCTGAAAGTCCACCAACTGTCAGGTTCCAGA
EY912693       <-- CTTCTGTGGCAAGGAATACCCTGAAAGTCCACCAACTGTCAGGTTCCAGA
EX907233       <-- .TTCTGTGGCAAGGAATACCCTGAAAGTCCACCAACTGTCAGGTTCCAGA
FD968888       <-- ..................................................
EX903160       --> CTTCTGTGGCAAGGAATACCCTGAAAGTCCACCAACTGTCAGGTTCCAGA
FD988737       --> CTTCTGTGGCAAGGAATACCCTGAAAGTCCACCAACTGTCAGGTTCCAGA
EX903101       --> CTTCTGTGGCAAGGAATACCCTGAAAGTCCACCAACTGTCAGGTTCCAGA
EY947427       --> CTTCTGTGGCAAGGAATACCCTGAAAGTCCACCAACTGTCAGGTTCCAGA
EY915851       --> CTTCTGTGGCAAGGAATACCCTGAAAGTCCACCAACTGTCAGGTTCCAGA
FD964085       --> CTTCTGTGGCAAGGAGTACCCTGAAAGTCCACCAACTGTCAGGTTCCAGA
FD572335       --> CTTCTGTGGCAAGGAATACCCTGAAAGTCCACCAACTGTCAGGTTCCAGA
FD973143       --> CTTCTGTGGCAAGGAATACCCTGAAAGTCCACCAACTGTCAGGTTCCAGA
FD568647       --> CTTCTGTGGCAAGGAATACCCTGAAAGTCCACCAACTGTCAGGTTCCAGA

               401    -    451
UN15688        --> CCCGGATCAACATGGCTTGTGTCAACCCTGAAACTGGAGTGGTTGAACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911620       <-- CCCGGATCAACATGGCTTGTGTCAACCCTGAAACTGGAGTGGTTGAACCG
FD960203       <-- CCCGGATCAACATGGCTTGTGTCAACCCTGAAACTGGAGTGGTTGAACCG
FD581263       <-- CCCGGATCAACATGGCTTGTGTCAACCCCGAAACTGGAGTCGTTGAACCG
EY912693       <-- CCCGGATCAACATGGCTTGTGTCAACCCTGAAACTGGAGTGGTTGAACCG
EX907233       <-- CCCGGATCAACATGGCTTGTGTCAACCCCGAAACTGGAGTCGTTGAACCG
FD968888       <-- ..................................................
EX903160       --> CCCGGATCAACATGGCTTGTGTCAACCCCGAAACTGGAGTCGTTGAACCG
FD988737       --> CCCGGATCAACATGGCTTGTGTCAACCCTGAAACTGGAGTGGTTGAACCG
EX903101       --> CCCGGATCAACATGGCTTGTGTCAACCCCGAAACTGGAGTCGTTGAACCG
EY947427       --> CCCGGATCAACATGGCTTGTGTCAACCCCGAAACTGGAGTCGTTGAACCG
EY915851       --> CCCGGATCAACATGGCTTGTGTCAACCCTGAAACTGGAGTGGTTGAACCG
FD964085       --> CCCGGATCAACATGGCTTGTGTCAACCCTGAAACTGGAGTGGTTGAACCG
FD572335       --> CCCGGATCAACATGGCTTGTGTCAACCCTGAAACTGGAGTGGTTGAACCG
FD973143       --> CCCGGATCAACATGGCTTGTGTCAACCCCGAAACTGGAGTCGTTGAACCG
FD568647       --> CCCGGATCAACATGGCTTGTGTCAACCCTGAAACTGGAGTGGTTGAACCG

               451    -    501
UN15688        --> AGCCTCTTCCCTATGCTCGCAAACTGGCGGCGAGAATACACAATGGAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911620       <-- AGCCTCTTCCCTATGCTCGCTAACTGGCGGCGAGAATACACAATGGAGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD960203       <-- AGCCTCTTCCCTATGCTCGCAAACTGGCGGCGAGAATACACAATGGAGGA  Raphanus raphanistrum subsp. maritimus
FD581263       <-- AGCCTCTTCCCTATGCTCGCAAACTGGAGGCGAGAATACACAATGGAGGA  Raphanus sativus cv Rat-Tail Radish #3870
EY912693       <-- AGCCTCTTCCCTATGCTCGCTAACTGGCGGCGAGAATACACAATGGAGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX907233       <-- AGCCTCTTCCCTATGCTCGCAAATTGGAGGCGAGAATACACAATGGAGGA  Raphanus sativus cv Rat-Tail Radish #3870
FD968888       <-- ....TCTTCCCTATGCTCGCAAACTGGCGGCGAGAATACACAATGGAGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX903160       --> AGCCTCTTCCCTATGCTCGCAAACTGGAGGCGAGAATACACAATGGAGGA  Raphanus sativus cv Rat-Tail Radish #3870
FD988737       --> AGCCTCTTCCCTATGCTCGCTAACTGGCGGCGAGAATACACAATGGAGGA  Raphanus raphanistrum subsp. landra
EX903101       --> AGCCTCTTCCCTATGCTCGCAAATTGGAGGCGAGAATACACAATGGAGGA  Raphanus sativus cv Rat-Tail Radish #3870
EY947427       --> AGCCTCTTCCCTATGCTCGCAAACTAGAGGCGAGAATACACAATGGAGGA  Raphanus sativus cv Rat-Tail Radish #3870
EY915851       --> AGCCTCTTCCCTATGCTCGCTAACTGGCGGCGAGAATACACAATGGAGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964085       --> AGCCTCTTCCCTATGCTCGCAAACTGGCGGCGAGAATACACAATGGAGGA  Raphanus raphanistrum subsp. maritimus
FD572335       --> AGCCTCTTCCCTATGCTCGCTAACTGGCGGCGAGAATACACAATGGAGGA  Raphanus sativus cv Early Scarlet Globe
FD973143       --> AGTCTCTTCCCTATGCTCGCAAACTGGCGGCGAGAATACACAATGGAGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD568647       --> AGCCTCTTCCCTATGCTCGCTAACTGGCGGCGAGAATACACAATGGAGGA  Raphanus sativus cv Early Scarlet Globe

               501    -    551
UN15688        --> CATTCTGATTAAGCTGAAAAAAGAAATGATGACTTCCCATAACCGCAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911620       <-- CATTCTGATTAAGCTGAAAAAAGAAATGATGACTTCCCATAACCGCAAGC
FD960203       <-- CATTCTGATTAAGCTG..................................
FD581263       <-- CATTCTGATTAAGCTGAAAAAAGAAATGATGACTTCCCATAACCGCAAGC
EY912693       <-- CATTCTGATTAAGCTGAAAAAAGAAATGATGACTTCCCATAACCGCAAGC
EX907233       <-- CATTCTGATTAAGCTGAAAAAAGAAATGATGACTTCCCATAACCGCAAGC
FD968888       <-- CATTCTGATTAAGCTGAAAAAAGAAATGATGACTTCCCATAACCGCAAGC
EX903160       --> CATTCTGATTAAGCTGAAAAAAGAAATGATGACTTCCCATAACCGCAAGC
FD988737       --> CATTCTGATTAAGCTGAAAAAAGAAATGATGACTTCCCATAACCGCAAGC
EX903101       --> CATTCTGATTAAGCTGAAAAAAGAAATGATGACTTCCCATAACCGCAAGC
EY947427       --> CATTCTGATTAAGCTGAAAAAAGAAATGATGACTTCCCATAACCGCAAGC
EY915851       --> CATTCTGATTAAGCTGAAAAAAGAAATGATGACTTCCCATAACCGCAAGC
FD964085       --> CATTCTGATTAAGCTG..................................
FD572335       --> CATTCTGATTAAGCTGAAAAAAGAAATGATGACTTCCCATAACCGCAAGC
FD973143       --> CATTCTGATTAAGCTGAAAAAAGAAATGATGACTTCCCATAACCGCAAGC
FD568647       --> CATTCTGATTAAGCTGAAAAAAGAAATGATGACTTCCCATAACCGCAAGC

               551    -    601
UN15688        --> TAGCTCAACCCCCGGAAGGTACCGAGGAAGCTAGGGCGGATCCAAAGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911620       <-- TAGCTCAACCCCCGGAAGGTACCGAGGAAGCTAGGGCGGATCCAAAGGGA
FD960203       <-- ..................................................
FD581263       <-- TAGCTCAACCCCCGGAAGGTACCGAGGAAGCTAGGGCGGATCCAAAGGGA
EY912693       <-- TAGCTCAACCCCCGGAAGGTACCGAGGAAGCTAGGGCGGATCCAAAGGGA
EX907233       <-- TAGCTCAACCCCCGGAAGGTACCGAGGAAGCTAGGGCGGATCCAAAGGGA
FD968888       <-- TAGCTCAACCCCCGGAAGGTACCGAGGAAGCTAGGGCGGATCCAAAGGGA
EX903160       --> TAGCTCAACCCCCGGAAGGCACCGAAGAAGCTAGGGCGGATCCAAAGGGA
FD988737       --> TAGCTCAACCCCCGGAAGGTACCGAGGAAGCTAGGGCGGATCTAAAGGGA
EX903101       --> TAGCTCAACCCCCGGAAGGTACCGAGGAAGCTAGGGCGGATCCAAAGGGA
EY947427       --> TAGCTCAACCCCCGGAAGGTACCGAGGAAGCTAGGGCGGATCC.......
EY915851       --> TAGCTCAACCCCCGGAAGGTACCGAGGAAGCTAGGGCGGATCCAAAGGGA
FD964085       --> ..................................................
FD572335       --> TAGCTCAACCCC-GGAAGGTACCGAGGAAGCTAGGGCGGATCCAAAGGGA
FD973143       --> TAGCTCAACCCCCGGAAGGTACCGAGGAAGCTAGGGCGGATCCAAAGGGA
FD568647       --> TAGCTCAACCCCCGGAAGGTACCGAGGAAGCTAGGGCGGATCCAAAGGGA

               601    -    651
UN15688        --> CCAGCTAAATGTTGTGTGATGTGAAGAGAGAGAGAGAGA--AGTTGGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911620       <-- CCAGCTAAATGTTGTGTGATGTGAAGAGAGAGAGAGAGA--AGTTGGAGG
FD960203       <-- ..................................................
FD581263       <-- CCAGCTAAATGTTGTGTGATGTGAAGAGAGAGAGAGAGAGAAGTTGGAGG
EY912693       <-- CCAGCTAAATGTTGTGTGATGTGAAGAGAGAGAGAGAGA--AGTTGGAGG
EX907233       <-- CCAGCTAAATGTTGTGTGATGTGAAGAGAGAGAGAGAGAGAAGTTGGAGG
FD968888       <-- CCAGCTAAATGTTGTGTGATGTGAAGATAGAGAGAGAGA--AGTTGGAGG
EX903160       --> CCAGCTAAATGTTGTGTGATGTGAAGAGAGAGAGAGAGA--AGTTGGAGG
FD988737       --> CCAGCTAAATGTTGTGTGATGTGAAGAGAGAGAGAGAGAGAAGTTGGAGG
EX903101       --> CCAGCTAAATGTTGTGTGATGTGAAGAGAGAGAGAGAGAGAAGTTGGAGG
EY947427       --> ..................................................
EY915851       --> CCAGCTAAATGTTGTGTGATGTGAAGAGAGAGAGAGAGA--AGTTGGAGG
FD964085       --> ..................................................
FD572335       --> CCAGCTAAATGTTGTGTGATGTGAAGAGAGAGAGAGAGAGAAGTTGGAGG
FD973143       --> CCAGCTAAATGTTGTGTGATGTGAAGATAGAGAGAGAGA--AGTTGGAGG
FD568647       --> CCAGCTAAATGTTGTGTGATGTGAAGAGAGAGAGAGAGA--AGTTGGAGG

               651    -    701
UN15688        --> GAACCACGGTCAATTTGTATTAATAGAAGGGATAATGTATATATAAAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911620       <-- GAACCACGGTCAATTTGTATTAATAGAAGGGATAATGTATATATAAAAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD960203       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD581263       <-- GAACCGCGGTCAATTTGTATTAATAGAAGGGATAATGTATATATAAAAAC  Raphanus sativus cv Rat-Tail Radish #3870
EY912693       <-- GAACCACGGTCAATTTGTATTAATAGAAGGGATAATGTATATATAAAAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX907233       <-- GAACCGCGGTCAATTTGTATTAATAGAAGGGATAATGTATATATAAAAAC  Raphanus sativus cv Rat-Tail Radish #3870
FD968888       <-- GAACCACGGTCAATTTGTATTAATAGAAGGGATAATGTATATATAAAA-C  Raphanus raphanistrum subsp. raphanistrum (MS)
EX903160       --> GAACCGCGGTCAATTTGTATTAATAGAAGGGATAATGTATATATAAAAAC  Raphanus sativus cv Rat-Tail Radish #3870
FD988737       --> GAACCACGGTCAATTTGTATTA-TAGAAGG-ATAATGTATATATAAAA-C  Raphanus raphanistrum subsp. landra
EX903101       --> GAACCGCGGTCAATTTGTATTAATAGAAGGGATAATGTATATATAAAA-C  Raphanus sativus cv Rat-Tail Radish #3870
EY947427       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY915851       --> GAAC..............................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964085       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD572335       --> GAACCACGGTCAATTTGTATTAATAGAAGGGATAATGTATATATAAAAAC  Raphanus sativus cv Early Scarlet Globe
FD973143       --> GAACCACGGTCAATTTGTATTAATAGAAGGGATAATGTATATATAAAA-C  Raphanus raphanistrum subsp. raphanistrum (MS)
FD568647       --> GAACCACGGTCAATTTGTATTAATAGAAGGGATAATGTATATATAAAAAC  Raphanus sativus cv Early Scarlet Globe

               701    -    751
UN15688        --> ATCATTTGAAGCTTTTGAAATTTGCCTACGACTT-GAATGTTATACA-TG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911620       <-- ATCATTTGAAGCTTTTGACTTTTGCCTACGACTT-GAATGTTATA-A-TG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD960203       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD581263       <-- ATCATTTGAAGCTTTTGAAATTTGCCTACGACTT-GAATGTTATACACTG  Raphanus sativus cv Rat-Tail Radish #3870
EY912693       <-- ATCATTTGAAGCTTTTGATATTTGCCTACGACTT-GAATGTTATA-A-TG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX907233       <-- ATCATTTGAAGCTTTTGAAATTTGCCTACGACTT-GAATGTTATACACTG  Raphanus sativus cv Rat-Tail Radish #3870
FD968888       <-- ATCATTTGAAGCTTTTGAAATTTGCCTACGACTTTGAATGTTATAC--TG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX903160       --> ATCATTTGAAGCTTTTGAA-TTTGCCTACGACTT-GA-TG-TATACACTG  Raphanus sativus cv Rat-Tail Radish #3870
FD988737       --> ATCATTTGAg........................................  Raphanus raphanistrum subsp. landra
EX903101       --> ATCATTTGAAGCTTTTGAAATTTGCCTACGACTT-GA-TGTTATACACTG  Raphanus sativus cv Rat-Tail Radish #3870
EY947427       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY915851       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964085       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD572335       --> ATCATTTGAAGCTTTTGATATTTGCCTACGACTT-GA-TGTTATA-A-TG  Raphanus sativus cv Early Scarlet Globe
FD973143       --> ATCATTTGAAGCTTTTGAAATTTGCCTACGACTTTGAATGTTATAC--TG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD568647       --> ATCATTTGAAGCTTTTGATATTTGCCTACGACTT-GAATGTTATA-A-TG  Raphanus sativus cv Early Scarlet Globe

               751    -    801
UN15688        --> TTGTTTGAGATTCTATA-ATATATGTCCACCAAAAATAGGTGATTATGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911620       <-- TTGTTTGAGATTCg....................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD960203       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD581263       <-- TTGTTTCAGATTCTATA-ATATATGTCCACCAAAAATAGGTGATTATGAC  Raphanus sativus cv Rat-Tail Radish #3870
EY912693       <-- TTGTTTGAGATTCTATA--TATTTGTCCACCAAAAATAGGTGATTATGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX907233       <-- TTGTTTCAGATTCTATA-ATATATGTCCACCAAAAATAGGTGATTATGAC  Raphanus sativus cv Rat-Tail Radish #3870
FD968888       <-- TTGTTTGAGATTCTATATATATATGTCCACCAAAAATAGGTGATTATGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX903160       --> TTGTTTCAGATTCTATA--TATATGTCacaaaa.................  Raphanus sativus cv Rat-Tail Radish #3870
FD988737       --> ..................................................  Raphanus raphanistrum subsp. landra
EX903101       --> TTGTTTCAGATTCTATA-ATATATGTCCACCAAAAATAGGTGATTATGAC  Raphanus sativus cv Rat-Tail Radish #3870
EY947427       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY915851       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD964085       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD572335       --> TTGTTTGAGATTCTATA--TATTTGTCCACCAAAAA..............  Raphanus sativus cv Early Scarlet Globe
FD973143       --> TTGTTTGAGATTCTATATATATATGTCCACCAAAAA..............  Raphanus raphanistrum subsp. raphanistrum (MS)
FD568647       --> TTGTTTGAGATTCTATA--TATTTGTCCACCAAAAA..............  Raphanus sativus cv Early Scarlet Globe

               801    -    851
UN15688        --> CCCAAAAA
                   ~~~~~~~~
EY911620       <-- ........
FD960203       <-- ........
FD581263       <-- CCCt....
EY912693       <-- CCt.....
EX907233       <-- CCC.....
FD968888       <-- CC......
EX903160       --> ........
FD988737       --> ........
EX903101       --> CCCAAAAA
EY947427       --> ........
EY915851       --> ........
FD964085       --> ........
FD572335       --> ........
FD973143       --> ........
FD568647       --> ........