RadishBase

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Alignment for radish unigene UN15698

               1      -     51
UN15698        --> TTCTCGGCGACACAATGGCGTCTCTTCTGACCTCTCCCATAACAAAGCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718351       <-- ..................................................
FD982856       <-- ..................................................
EX752242       <-- ..................................................
EV544692       <-- ..................................................
EW718612       <-- ..................................................
EX774455       <-- ..................................................
FD553203       <-- ..................................................
EY918365       <-- ..................................................
FY454282       --> TTCTCGGCGACACAATGGCGTCTCTTCTGACCTCTCCCATAACAAAGCCC
FY451183       --> ............CAATGGCGTCTCTTCTGACCTCTCCCATAACAAAGCCC
FY431195       --> .................................CTCCCATAACAAAGCCC
FY436183       --> .............................................AGCCC
FY451531       --> .............................................AGCCC
FY452481       --> .............................................AGCCC
FY452632       --> .............................................AGCCC
FY449170       --> ..............................................GCCC
FY430345       --> ..................................................
EY922396       --> ..................................................
EW713464       --> ..................................................
EW713465       --> ..................................................
EX902606       --> ..................................................
EV549164       --> ..................................................
EX748250       --> ..................................................

               51     -    101
UN15698        --> AAACCTTTCTTCCTCTCCTCGCCTCCACGACCACTAACCGCACCGCCGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718351       <-- ..................................................
FD982856       <-- ..................................................
EX752242       <-- ..................................................
EV544692       <-- ..................................................
EW718612       <-- ..................................................
EX774455       <-- ..................................................
FD553203       <-- ..................................................
EY918365       <-- ..................................................
FY454282       --> AAACCTTTCTTCCTCTCCTCGCCTCCACGACCACTAACCGCACCGCCGTC
FY451183       --> AAACCTTTCTTCCTCTCCTCGCCTCCACGACCACTAACCGCACCGCCGTC
FY431195       --> AAACCTTTCTTCCTCTCCTCGCCTCCTTGACCACTAACCGCACCGCCGTC
FY436183       --> AAACCTTTCTTCCTCTCCTCGCCTCCACGACCACTAACCGCACCGCCGTC
FY451531       --> AAACCTTTCTTCCTCTCCTCGCCTCCACGACCACTAACCGCACCGCCGTC
FY452481       --> AAACCTTTCTTCCTCTCCTCGCCTCCACGACCACTAACCGCACCGCCGTC
FY452632       --> AAACCTTTCTTCCTCTCCTCGCCTCCACGACCACTAACCGCACCGCCGTC
FY449170       --> AAACCTTTCTTCCTCTCCTCGCCTCCACGACCACTAACCGCACCGCCGTC
FY430345       --> ..............CTCCTCGCCTCC-CGACCACTAACCGCACCGCCGTC
EY922396       --> ..................................................
EW713464       --> ..................................................
EW713465       --> ..................................................
EX902606       --> ..................................................
EV549164       --> ..................................................
EX748250       --> ..................................................

               101    -    151
UN15698        --> GTTGAATCTCGCCGGGATCTCACTCACCCACAACCAAAAGCTCGCTCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718351       <-- ..................................................
FD982856       <-- ..................................................
EX752242       <-- ..................................................
EV544692       <-- ..................................................
EW718612       <-- ..................................................
EX774455       <-- ..................................................
FD553203       <-- ..................................................
EY918365       <-- ..................................................
FY454282       --> GTTGAATCTCGCCGGGATCTCACTCACCCACAACCAAAAGCTCGCTCCTT
FY451183       --> GTTGAATCTCGCCGGGATCTCACTCACCCACAACCAAAAGCTCGCTCCTT
FY431195       --> GTTGAATCTCGCCGGGATCTCACTCACCCACAACCAAAAGCTCGCTCCTT
FY436183       --> GTTGAATCTCGCCGGGATCTCACTCACCCACAACCAAAAGCTCGCTCCTT
FY451531       --> GTTGAATCTCGCCGGGATCTCACTCACCCACAACCAAAAGCTCGCTCCTT
FY452481       --> GTTGAATCTCGCCGGGATCTCACTCACCCACAACCAAAAGCTCGCTCCTT
FY452632       --> GTTGAATCTCGCCGGGATCTCACTCACCCACAACCAAAAGCTCGCTCCTT
FY449170       --> GTTGAATCTCGCCGGGATCTCACTCACCCACAACCAAAAGCTCGCTCCTT
FY430345       --> GTTGAATCTCGCCGGGATCTCACTCACCCACAACCAAAAGCTCGCTCCTT
EY922396       --> ..................................................
EW713464       --> ..................................................
EW713465       --> ..................................................
EX902606       --> ..................................................
EV549164       --> ..................................................
EX748250       --> ..................................................

               151    -    201
UN15698        --> TCAGGCTCCCCAGCCTCCTCGTCTCCTCCGCACTCAAGAGAGATGTCGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718351       <-- ..................................................
FD982856       <-- ..................................................
EX752242       <-- ..................................................
EV544692       <-- ..................................................
EW718612       <-- ..................................................
EX774455       <-- ..................................................
FD553203       <-- ..................................................
EY918365       <-- ..................................................
FY454282       --> TCAGGCTCCCCAGCCTCCTCGTCTCCTCCGCACTCAAGAGAGATGTCGCC
FY451183       --> TCAGGCTCCCCAGCCTCCTCGTCTCCTCCGCACTCAAGAGAGATGTCGCC
FY431195       --> TCAGGCTCCCCAGCCTCCTCGTCTCCTCCGCACTCAAGAGAGATGTCGCC
FY436183       --> TCAGGCTCCCCAGCCTCCTCGTCTCCTCCGCACTCAAGAGAGATGTCGCC
FY451531       --> TCAGGCTCCCCAGCCTCCTCGTCTCCTCCGCACTCAAGAGAGATGTCGCC
FY452481       --> TCAGGCTCCCCAGCCTCCTCGTCTCCTCCGCACTCAAGAGAGATGTCGCC
FY452632       --> TCAGGCTCCCCAGCCTCCTCGTCTCCTCCGCACTCAAGAGAGATGTCGCC
FY449170       --> TCAGGCTCCCCAGCCTCCTCGTCTCCTCCGCACTCAAGAGAGATGTCGCC
FY430345       --> TCAGGCTCCCCAGCCTCCTCGTCTCCTCCGCACTCAAGAGAGATGTCGCC
EY922396       --> ..................................................
EW713464       --> ..................................................
EW713465       --> ..................................................
EX902606       --> ..................................................
EV549164       --> ..................................................
EX748250       --> ..................................................

               201    -    251
UN15698        --> GCCGCAGCTGCTGCTTCAGCGGCGGAGTCTGAGGGAGATTACAGAAGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718351       <-- ..................................................
FD982856       <-- ..................................................
EX752242       <-- ..................................................
EV544692       <-- ..................................................
EW718612       <-- ..................................................
EX774455       <-- ..................................................
FD553203       <-- ..................................................
EY918365       <-- ..................................................
FY454282       --> GCCGCAGCTGCTGCTTCAGCGGCGGAGTCTGAGGGAGATTACAGAAGGAT
FY451183       --> GCCGCAGCTGCTGCTTCAGCGGCGGAGTCTGAGGGAGATTACAGAAGGAT
FY431195       --> GCCGCAGCTGCTGCTTCAGCGGCGGAGTCTGAGGGAGATTACAGAAGGAT
FY436183       --> GCCGCAGCTGCTGCTTCAGCGGCGGAGTCTGAGGGAGATTACAGAAGGAT
FY451531       --> GCCGCAGCTGCTGCTTCAGCGGCGGAGTCTGAGGGAGATTACAGAAGGAT
FY452481       --> GCCGCAGCTGCTGCTTCAGCGGCGGAGTCTGAGGGAGATTACAGAAGGAT
FY452632       --> GCCGCAGCTGCTGCTTCAGCGGCGGAGTCTGAGGGAGATTACAGAAGGAT
FY449170       --> GCCGCAGCTGCTGCTTCAGCGGCGGAGTCTGAGGGAGATTACAGAAGGAT
FY430345       --> GCCGCAGCTGCTGCTTCAGCGGCGGAGTCTGAGGGAGATTACAGAAGGAT
EY922396       --> ..................................................
EW713464       --> ..................................................
EW713465       --> ..................................................
EX902606       --> ..................................................
EV549164       --> ..................................................
EX748250       --> ..................................................

               251    -    301
UN15698        --> AATGCTTTCGGATGTGATGGTGAAGAAGAAGAAGGACAAGGCGGTTTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718351       <-- ..................................................
FD982856       <-- ..................................................
EX752242       <-- ..................................................
EV544692       <-- ..................................................
EW718612       <-- ..................................................
EX774455       <-- ..................................................
FD553203       <-- ..................................................
EY918365       <-- ..................................................
FY454282       --> AATGCTTTCGGATGTGATGGTGAAGAAGAAGAAGGACAAGGCGGTTTGGT
FY451183       --> AATGCTTTCGGATGTGATGGTGAAGAAGAAGAAGGACAAGGCGGTTTGGT
FY431195       --> AATGCTTTCGGATGTGATGGTGAAGAAGAAGAAGGACAAGGCGGTTTGGT
FY436183       --> AATGCTTTCGGATGTGATGGTGAAGAAGAAGAAGGACAAGGCGGTTTGGT
FY451531       --> AATGCTTTCGGATGTGATGGTGAAGAAGAAGAAGGACAAGGCGGTTTGGT
FY452481       --> AATGCTTTCGGATGTGATGGTGAAGAAGAAGAAGGACAAGGCGGTTTGGT
FY452632       --> AATGCTTTCGGATGTGATGGTGAAGAAGAAGAAGGACAAGGCGGTTTGGT
FY449170       --> AATGCTTTCGGATGTGATGGTGAAGAAGAAGAAGGACAAGGCGGTTTGGT
FY430345       --> AATGCTTTCGGATGTGATGGTGAAGAAGAAGAAGGACAAGGCGGTTTGGT
EY922396       --> ..................................................
EW713464       --> ..................................................
EW713465       --> ..................................................
EX902606       --> ..................................................
EV549164       --> ..................................................
EX748250       --> ..................................................

               301    -    351
UN15698        --> GGGAGAGAGAGTGGACTTCGATGGATTTCGGAGCTGTTGCTGTGGTTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718351       <-- ..................................................
FD982856       <-- ..................................................
EX752242       <-- ..................................................
EV544692       <-- ..................................................
EW718612       <-- ..................................................
EX774455       <-- ..................................................
FD553203       <-- ..................................................
EY918365       <-- ..................................................
FY454282       --> GGGAGAGAGAGTGGACTTCGATGGATTTCGGAGCTGTTGCTGTGGTTGTC
FY451183       --> GGGAGAGAGAGTGGACTTCGATGGATTTCGGAGCTGTTGCTGTGGTTGTC
FY431195       --> GGGAGAGAGAGTGGACTTCGATGGATTTCGGAGCTGTTGCTGTGGTTGTC
FY436183       --> GGGAGAGAGAGTG.....................................
FY451531       --> GGGAGAGAGAGTGGACTTCGATGGATTTCGGAGCTGTTGCTGTGGTTGTC
FY452481       --> GGGAGAGAGAGTGGACTTCGATGGATTTCGGAGCTGTTGCTGTGGTTGTC
FY452632       --> GGGAGAGAGAGTGGACTTCGATGGATTTCGGAGCTGTTGCTGTGGTTGTC
FY449170       --> GGGAGAGAGAGTGGACTTCGATGGATTTCGGAGCTGTTGCTGTGGTTGTC
FY430345       --> GGGAGAGAGAGTGGACTTCGATGGATTTCGGAGCTGTTGCTGTGGTTGTC
EY922396       --> ..................................................
EW713464       --> ..................................................
EW713465       --> ..................................................
EX902606       --> ..................................................
EV549164       --> ..................................................
EX748250       --> ..................................................

               351    -    401
UN15698        --> TCCATGCATTTGCTTAGCTTGTTGGCTCCGTTTCAGTTTAACTGGAGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718351       <-- ..................................................
FD982856       <-- ..................................................
EX752242       <-- ..................................................
EV544692       <-- ..................................................
EW718612       <-- ..................................................
EX774455       <-- ..................................................
FD553203       <-- ..................................................
EY918365       <-- ..................................................
FY454282       --> TCCATGCATTTGCTTAGCTTGTTGGCTCCGTTTCAGTTTAACTGGAGAGC
FY451183       --> TCCATGCATTTGCTTAGCTTGTTGGCTCCGTTTCAGTTTAACTGGAGAGC
FY431195       --> TCCATGCATTTGCTTAGCTTGTTGGCTCCGTTTCAGTTTAACTGGAGAGC
FY436183       --> ..................................................
FY451531       --> TCCATGCATTTGCTTAGCTTGTTGGCTCCGTTTCAGTTTAACTGGAGAGC
FY452481       --> TCCATGCATTTGCTTAGCTTGTTGGCTCCGTTTCAGTTTAACTGGAGAGC
FY452632       --> TCCATGCATTTGCTTAGCTTGTTGGCTCCGTTTCAGTTTAACTGGAGAGC
FY449170       --> TCCATGCATTTGCTTAGCTTGTTGGCTCCGTTTCAGTTTAACTGGAGAGC
FY430345       --> TCCATGCATTTGCTTAGCTTGTTGGCTCCGTTTCAGTTTAACTGGAGAGC
EY922396       --> ...............................gTCAGTTTAACTGGAGAGC
EW713464       --> ..................................................
EW713465       --> ..................................................
EX902606       --> ..................................................
EV549164       --> ..................................................
EX748250       --> ..................................................

               401    -    451
UN15698        --> TGTCTCGGTTGCTTTTGTGCTTTATATCGTGACGGGTCTTCTGGGGATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718351       <-- ...........................................GGGATCA  Raphanus sativus var. oleiformis
FD982856       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX752242       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV544692       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW718612       <-- ..................................................  Raphanus sativus var. oleiformis
EX774455       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD553203       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY918365       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY454282       --> TGTCTCGGTTGCTTTTGTGCTTTATATCGTGACGGGTCTTCTGGGGATTA  Raphanus sativus cv GSK3-1
FY451183       --> TGTCTCGGTTGCTTTTGTGCTTTATATCGTGACGGGTCTTCTGGGGATTA  Raphanus sativus cv GSK3-1
FY431195       --> TGTCTCGGTTGCTTTTGTGCTTTATATCGTGACGGGTCTTCTGGGGATTA  Raphanus sativus cv GSK3-1
FY436183       --> ..................................................  Raphanus sativus cv GSK3-1
FY451531       --> TGTCTCGGTTGCTTTTGTGCTTTATATCGTGACGGGTCTTCTGGGGATTA  Raphanus sativus cv GSK3-1
FY452481       --> TGTCTCGGTTGCTTTTGTGCTTTATATCGTGACGGGTCTTCTGGGGATTA  Raphanus sativus cv GSK3-1
FY452632       --> TGTCTCGGTTGCTTTTGTGCTTTATATCGTGACGGGTCTTCTGGGGATTA  Raphanus sativus cv GSK3-1
FY449170       --> TGTCTCGGTTGCTTTTGTGCTTTATATCGTGACGGGTCTTCTGGGGATTA  Raphanus sativus cv GSK3-1
FY430345       --> TGTCTCGGTTGCTTTTGTGCTTTATATCGTGACGGGTCTTCTGGGGATTA  Raphanus sativus cv GSK3-1
EY922396       --> TGTCTCGGTTGCTTTTGCGCTTTATATTGTGACGGGTCTTCTGGGGATCA  Raphanus raphanistrum subsp. landra
EW713464       --> .............................ggggGGGTCTTCTGGGGATCA  Raphanus sativus var. oleiformis
EW713465       --> ................................gGGGTCTTCTGGGGATCA  Raphanus sativus var. oleiformis
EX902606       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV549164       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748250       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               451    -    501
UN15698        --> CTCTGTCTTTTCATAGGAATCTTACTCATAGAAGCTTCAAGCTTCCTAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718351       <-- CTCTGTCTTT-CATAGGAATCTTACTCATAGGAGCTTCAAGCTTCCTAAG  Raphanus sativus var. oleiformis
FD982856       <-- .................................................G  Raphanus raphanistrum subsp. landra
EX752242       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV544692       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW718612       <-- ..................................................  Raphanus sativus var. oleiformis
EX774455       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD553203       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY918365       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY454282       --> CTCTGTCTTTTCATAGGAATCTTACTCATAGAAGCTTCAAGCTTCCTAAG  Raphanus sativus cv GSK3-1
FY451183       --> CTCTGTCTTTTCATAGGAATCTTACTCATAGAAGCTTCAAGCTTCCTAAG  Raphanus sativus cv GSK3-1
FY431195       --> CTCTGTCTTTTCATAGGAATCTTACTCATAGAAGCTTCAAGCTTCCTAAG  Raphanus sativus cv GSK3-1
FY436183       --> ..................................................  Raphanus sativus cv GSK3-1
FY451531       --> CTCTGTCTTTTCATAGGAATCTTACTCATAGAAGCTTCAAGCTTCCTAAG  Raphanus sativus cv GSK3-1
FY452481       --> CTCTGTCTTTTCATAGGAATCTTACTCATAGAAGCTTCAAGCTTCCTAAG  Raphanus sativus cv GSK3-1
FY452632       --> CTCTGTCTTTTCATAGGAATCTTACTCATAGAAGCTTCAAGCTTCCTAAG  Raphanus sativus cv GSK3-1
FY449170       --> CTCTGTCTTTTCATAGGAATCTTACTCATAGAAGCTTCAAGCTTCCTAAG  Raphanus sativus cv GSK3-1
FY430345       --> CTCTGTCTTTTCATAGGAATCTTACTCATAGAAGCTTCAAGCTTCCTAAG  Raphanus sativus cv GSK3-1
EY922396       --> CTCTGTCTTTTCATAGGAATCTTACTCATAGAAGCTTCAAGCTTCC--CT  Raphanus raphanistrum subsp. landra
EW713464       --> CTCTGTCTTTTCATAGGAATCTTACTCATAGGAGCTTCAAGCTTCCTAAG  Raphanus sativus var. oleiformis
EW713465       --> CTCTGTCTTTTCATAGGAATCTTACTCATAGGAGCTTCAAGCTTCCTAAG  Raphanus sativus var. oleiformis
EX902606       --> ...........gATAGGAATCTTACTCATAGAAGCTTCAAGCTTCCTAAG  Raphanus sativus cv Rat-Tail Radish #3870
EV549164       --> ...................ggTTACTCATAGGAGCTTCAAGCTTCCTAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748250       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               501    -    551
UN15698        --> TGGCTTGAGTACTTGTTTGCTTATTGTGGAGCTCAGGCTCTTCAGGGGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718351       <-- TGGCTTGAGTACTTGTTTGCTTATTGTGGAGCTCAGGCTCTTCAGGGGCA
FD982856       <-- TGGCTTGAGTACTTGTTTGTTTATTGTGGAGCTCAGGCTCTTCAGGGGCA
EX752242       <-- ...................................GGCTCTTCAGGGGCA
EV544692       <-- ............................................GGGGCA
EW718612       <-- .................................................A
EX774455       <-- ..................................................
FD553203       <-- ..................................................
EY918365       <-- ..................................................
FY454282       --> TGGCTTGAGTACTTGTTTGCTTATTGTGGAGCTCAGGCTCTTCAGGGGCA
FY451183       --> TGGCTTGAGTACTTGTTTGCTTATTGTGGAGCTCAGGCTCTTCAGGGGCA
FY431195       --> TGGCTTGAGTACTTGTTTGCTTATTGTGGAGCTCAGGCTCTTCAGGGGCA
FY436183       --> ..................................................
FY451531       --> TGGCTTGAGTACTTGTTTGCTTATTGTGGAGCTCAGGCTCTTCAGGGGCA
FY452481       --> TGGCTTGAGTACTTGTTTGCTTATTGTGGAGCTCAGGCTCTTCAGGGGCA
FY452632       --> TGGCTTGAGTACTTGTTTGCTTATTGTGGAGCTCAGGCTCTTCAGGGGCA
FY449170       --> TGGCTTGAGTACTTGTTTGCTTATTGTGGAGCTCAGGCTCTTCAGGGGCA
FY430345       --> TGGCTTGAGTACTTGTTTGCTTATTGTGGAGCTCAGGCTCTTCAGGGGCA
EY922396       --> TGGCTTGAGTACTTGTTTGCTTATTGTGGAGCTCAGGCTCTTCAGGGGCA
EW713464       --> TGGCTTGAGTACTTGTTTGCTTATTGTGGAGCTCAGGCTCTTCAGGGGCA
EW713465       --> TGGCTTGAGTACTTGTTTGCTTATTGTGGAGCTCAGGCTCTTCAGGGGCA
EX902606       --> TGGCTTGAGTACTTGTTTGCTTATTGTGGAGCTCAGGCTCTTCAGGGGCA
EV549164       --> TGGCTTGAGTACTTGTTTGCTTATTGTGGAGCTCAAGCTCTTCAGGGGCA
EX748250       --> ...................................GGCTCTTCAGGGGCA

               551    -    601
UN15698        --> CCCTATTGATTGGGTGAGTACGCATAGGTACCATCATCAGTTTTGTGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718351       <-- CCCTATTGATTGGGTGAGTACGCATAGGTACCATCATCAGTTTTGTGATT
FD982856       <-- CCCTATTGATTGGGTGAGTACGCATAGGTACCATCATCAGTTTTGTGATT
EX752242       <-- CCCTATTGATTGGGTGAGTACGCATAGGTACCATCATCAGGTTTGTGATT
EV544692       <-- CCCTATTGATTGGGTGAGTACACATAGGTACCATCATCAGTTTTGTGATT
EW718612       <-- CCCTATTGATTGGGTGAGTACGCATAGGTACCATCATCAGTTTTGTGATT
EX774455       <-- ..................................................
FD553203       <-- ..................................................
EY918365       <-- ..................................................
FY454282       --> CCCTATTGATTGGGTGAGTACGCATAGGTACCATCATCAGTTTTGTGATT
FY451183       --> CCCTATTGATTGGGTGAGTACGCATAGGTACCATCATCAGTTTTGTGATT
FY431195       --> CCCTATTGATTGGGTGAGTACGCATAGGTACCATCATCAGTTTTGTGATT
FY436183       --> ..................................................
FY451531       --> CCCTATTGATTGGGTGAGTACGCATAGGTACCATCATCAGTTTTGTGATT
FY452481       --> CCCTATTGATTGGGTGAGTACGCATAGGTACCATCATCAGTTTTGTGATT
FY452632       --> CCCTATTGATTGGGTGAGTACGCATAGGTACCATCATCAGTTTTGTGATT
FY449170       --> CCCTATTGATTGGGTGAGTACGCATAGGTACCATCATCAGTTTTGTGATT
FY430345       --> CCCTATTGATTGGGTGAGTACGCATAGGTACCATCATCAGTTTTGTGATT
EY922396       --> CCCTATTGATTGGGTGAGTACGCATAGGTACCATCATCAGTTTTGTGATT
EW713464       --> CCCTATTGATTGGGTGAGTACGCATAGGTACCATCATCAGTTTTGTGATT
EW713465       --> CCCTATTGATTGGGTGAGTACGCATAGGTACCATCATCAGTTTTGTGATT
EX902606       --> CCCTATTGATTGGGTGAGTACGCATAGGTACCATCATCAGTTTTGTGATT
EV549164       --> CCCTATTGATTGGGTGAGTACACATAGGTACCATCATCAGTTTTGTGATT
EX748250       --> CCCTATTGATTGGGTGAGTACGCATAGGTACCATCATCAGGTTTGTGATT

               601    -    651
UN15698        --> CAGACAAGGATCCTCATAGCCCGCTTGAAGGGTTTTGGTTTAGTCACATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718351       <-- CGGACAAGGATCCTCATAGTCCGCTTGAAGGGTTTTGGTTTAGTCACATG  Raphanus sativus var. oleiformis
FD982856       <-- CAGACAAGGATCCTCATAGCCCGCTTGAAGGGTTTTGGTTTAGTCACATG  Raphanus raphanistrum subsp. landra
EX752242       <-- CAGACAAGGATCCTCATAGTCCGCTTGAAGGGTTTTGGTTTAGTCACATG  Raphanus raphanistrum subsp. maritimus
EV544692       <-- CAGACAAGGATCCTCATAGCCCGCTTGAAGGGTTTTGGTTTAGTCACATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW718612       <-- CGGACAAGGATCCTCATAGTCCGCTTGAAGGGTTTTGGTTTAGTCACATG  Raphanus sativus var. oleiformis
EX774455       <-- ................TAGCCCGCTTGAAGGGTTTTGGTTTAGTCACATG  Raphanus raphanistrum subsp. landra
FD553203       <-- ................TAGCCCGCTTGAAGGGTTTTGGTTTAGTCACATG  Raphanus raphanistrum subsp. landra
EY918365       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY454282       --> CAGACAAAGATCCTCATAGCCCGCTTGAAGGGTTTTGGTTTAGTCACATG  Raphanus sativus cv GSK3-1
FY451183       --> CAGACAAAGATCCTCATAGCCCGCTTGAAGGGTTTTGGTTTAGTCACATG  Raphanus sativus cv GSK3-1
FY431195       --> CAGACAAAGATCCTCATAGCCCGCTTGAAGGGTTTTGGTTTAGTCACATG  Raphanus sativus cv GSK3-1
FY436183       --> ..................................................  Raphanus sativus cv GSK3-1
FY451531       --> CAGACAAAGATCCTCATAGCCCGCTTGAAGGGTTTTGGTTTAGTCACATG  Raphanus sativus cv GSK3-1
FY452481       --> CAGACAAAGATCCTCATAGCCCGCTTGAAGGGTTTTGGTTTAGTCACATG  Raphanus sativus cv GSK3-1
FY452632       --> CAGACAAAGATCCTCATAGCCCGCTTGAAGGGTTTTGGTTTAGTCACATG  Raphanus sativus cv GSK3-1
FY449170       --> CAGACAAAGATCCTCATAGCCCGCTTGAAGGGTTTTGGTTTAGTCACATG  Raphanus sativus cv GSK3-1
FY430345       --> CAGACAAAGATCCTCATAGCCCGCTTGAAGGGTTTTGGTTTAGTCACATG  Raphanus sativus cv GSK3-1
EY922396       --> CAGACAAGGATCTTCATAGCCCGCTTGAAGGGTTTTGGTTTAGTCACATG  Raphanus raphanistrum subsp. landra
EW713464       --> CGGACAAGGATCCTCATAGTCCGCTTGAAGGGTTTTGGTTTAGTCACATG  Raphanus sativus var. oleiformis
EW713465       --> CGGACAAGGATCCTCATAGTCCGCTTGAAGGGTTTTGGTTTAGTCACATG  Raphanus sativus var. oleiformis
EX902606       --> CAGACAAAGATCCTCATAGCCCGCTTGAAGGGTTTTGGTTTAGTCACATG  Raphanus sativus cv Rat-Tail Radish #3870
EV549164       --> CAGACAAGGATCCTCATAGCCCGCTTGAAGGGTTTTGGTTTAGTCACATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748250       --> CAGACAAGGATCCTCATAGTCCGCTTGAAGGGTTTTGGTTTAGTCACATG  Raphanus raphanistrum subsp. maritimus

               651    -    701
UN15698        --> AATTGGATGTTTGATACCAATACTATCACGCAAAGGGTTGGAGAGCCTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718351       <-- AATTGGATGTTTGATACCAATACTATCACGCAAAGGGTTGGAGAGCCTAA
FD982856       <-- AATTGGATGTTTGATACCAATACTATCACGCAAAGGGCTGGAGAGCCTAA
EX752242       <-- AATTGGATGTTTGATACCAATACTATCACGCAAAGGGTTGAAGAGCCTAA
EV544692       <-- AATTGGATGTTTGATACCAATACTATCACGCAAAGGGTTG-AGAGCCTAA
EW718612       <-- AATTGGATGTTTGATACCAATACTATCACGCAAAGGGTTGGAGAGCCTAA
EX774455       <-- AATTGGATGTTTGATACCAATACTATCACGCAAAGGGTTGGAGAGCCTAA
FD553203       <-- AATTGGATGTTTGATACCAATACTATCACGCAAAGGGTTGGAGAGCCTAA
EY918365       <-- ..................................................
FY454282       --> AATTGGATGTTTGATACCAATACTATCACGCAAAGGGTTGGAGAGCCTAA
FY451183       --> AATTGGATGTTTGATACCAATACTATCACGCAAAGGGTTGGAGAGCCTAA
FY431195       --> AATTGGATGTTTGATACCAATACTATCACGCAAAGGGTTGGAGAGCCTAA
FY436183       --> ..................................................
FY451531       --> AATTGGATGTTTGATACCAATACTATCACGCAAAGGGTTGGAGAGCCTAA
FY452481       --> AATTGGATGTTTGATACCAATACTATCACGCAAAGGGTTGGAGAGCCTAA
FY452632       --> AATTGGATGTTTGATACCAATACTATCACGCAAAGGGTTGGAGAGCCTAA
FY449170       --> AATTGGATGTTTGATACCAATACTATCACGCAAAGGGTTGGAGAGCCTAA
FY430345       --> AATTGGATGTTTGATACCAATACTATCACGCAAAGGGTTGGAGAGCCTAA
EY922396       --> AATTGGATGTTTGATACCAATACTATCACGCAAAGGGTTGGAGAGCCTAA
EW713464       --> AATTGGATGTTTGATACCAATACTATCACGCAAAGGGTTGGAGAGCCTAA
EW713465       --> AATTGGATGTTTGATACCAATACTATCACGCAAAGGGTTGGAGAGCCTAA
EX902606       --> AATTGGATGTTTGATACCAATACTATCACGCAAAGGGTTGGAGAGCCTAA
EV549164       --> AATTGGATGTTTGATACCAATACTATCACGCAAAGGGTTG-AGAGCCTAA
EX748250       --> AATTGGATGTTTGATACCAATACTATCACGCAAAGGGTTGAAGAGCCTAA

               701    -    751
UN15698        --> TAATGTTGGGGACTTGGAGAAGCAGCCCTTCTATCAGTTCCTTAAAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718351       <-- TAATGTTGGGGACTTGGAGAAGCAGCCCTTCTATCAGTTCCTTAAAAACA
FD982856       <-- TAGTGTTGGGGACTTGGAGAAGCAGCCCTTCTATCAGTTCCTTAAAAACA
EX752242       <-- TAATGTCGGGGACTTGGAGAAGCAGCCCTTCTATCAGTTCCTTAAAAACA
EV544692       <-- TAATGTTGGGGACTTGGAGAAGCAGCCTTTCTATCAGTTCCTTAAAAACA
EW718612       <-- TAATGTTGGGGACTTGGAGAAGCAGCCCTTCTATCAGTTCCTTAAAAACA
EX774455       <-- TAATGTTGGGGACTTGGAGAAGCAGCCCTTCTATCAGTTCCTTAAAAACA
FD553203       <-- TAATGTTGGGGACTTGGAGAAGCAGCCCTTCTATCAGTTCCTTAAAAACA
EY918365       <-- ..................................................
FY454282       --> TAATGTTGGGGACTTGGAGAAGCAGCCCTTCTATCAGTTCCTTAAAAACA
FY451183       --> TAATGTTGGGGACTTGGAGAAGCAGCCCTTCTATCAGTTCCTTAAAAACA
FY431195       --> TAATGTTGGGGACTTGGAGAAGCAGCCCTTCTATCAGTTCCTTAAAAACA
FY436183       --> ..................................................
FY451531       --> TAATGTTGGGGACTTGGAGAAGCAGCCCTTCTATCAGTTCCTTAAAAACA
FY452481       --> TAATGTTGGGGACTTGGAGAAGCAGCCCTTCTATCAGTTCCTTAAAAACA
FY452632       --> TAATGTTGGGGACTTGGAGAAGCAGCCCTTCTATCAGTTCCTTAAAAACA
FY449170       --> TAATGTTGGGGACTTGGAGAAGCAGCCCTTCTATCAGTTCCTTAAAAACA
FY430345       --> TAATGTTGGGGACTTGGAGAAGCAGCCCTTCTATCAGTTCCTTAAAAACA
EY922396       --> TAATGTTGGGGACTTGGAGAAGCAGCCCTTCTATCAGTTCCTTAAAAACA
EW713464       --> TAATGTTGGGGACTTGGAGAAGCAGCCCTTCTATCAGTTCCTTAAAAACA
EW713465       --> TAATGTTGGGGACTTGGAGAAGCAGCCCTTCTATCAGTTCCTTAAAAACA
EX902606       --> TAATGTTGGGGACTTGGAGAAGCAGCCTTTCTATCAGTTCCTTAAAAACA
EV549164       --> TAATGTTGGGGACTTGGAGAAGCAGCCTTTCTATCAGTTCCTTAAAAACA
EX748250       --> TAATGTCGGGGACTTGGAGAAGCAGCCCTTCTATCAGTTCCTTAAAAACA

               751    -    801
UN15698        --> CCTACATTTGGCATCCGGTGGCTCTGGCGGTGGCTCTTTACGCAATGGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718351       <-- CCTACATTTGGCATCCGGTAGCTCTGGCGGTGGCTCTTTACGCAATGGGT  Raphanus sativus var. oleiformis
FD982856       <-- CCTACATTTGGCATCCGGTAGCTCTGGCGGTGGCTCTTTACGCAATGGGT  Raphanus raphanistrum subsp. landra
EX752242       <-- CTTACATTTGGCATCCGGTGGCTCTGGCGGTGGCTCTTTACGCAATGGGT  Raphanus raphanistrum subsp. maritimus
EV544692       <-- CCTACATTTGGCATCCGGTGGCTCTGGCGGTGGCTCTTTACGCAATGGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW718612       <-- CCTACATTTGGCATCCGGTAGCTCTGGCGGTGGCTCTTTACGCAATGGGT  Raphanus sativus var. oleiformis
EX774455       <-- CCTACATTTGGCATCCGGTAGCTCTGGCGGTGGCTCTTTACGCAATGGGT  Raphanus raphanistrum subsp. landra
FD553203       <-- CCTACATTTGGCATCCGGTAGCTCTGGCGGTGGCTCTTTACGCAATGGGT  Raphanus raphanistrum subsp. landra
EY918365       <-- ....................................TTTACGCAATGGGT  Raphanus raphanistrum subsp. landra
FY454282       --> CTTACATTTGGCATCCGGTGGCTCTGGCGGTGGCTCTTTACGCAATGGGT  Raphanus sativus cv GSK3-1
FY451183       --> CTTACATTTGGCATCCGGTGGCTCTGGCGGTGGCTCTTTACGCAATGGGT  Raphanus sativus cv GSK3-1
FY431195       --> CTTACATTTGGCATCCGGTGGCTCTGGCGGTGGCTCTTTACGCAATGGGT  Raphanus sativus cv GSK3-1
FY436183       --> ..................................................  Raphanus sativus cv GSK3-1
FY451531       --> CTTACATTTGGCATCCGGTGGCTCTGGCGGTGGCTCTTTACGCAATGGGT  Raphanus sativus cv GSK3-1
FY452481       --> CTTACATTTGGCATCCGGTGGCTCTGGCGGTGGCTCTTTACGCAATGGGT  Raphanus sativus cv GSK3-1
FY452632       --> CTTACATTTGGCATCCGGTGGCTCTGGCGGTGGCTCTTTACGCAATGGGT  Raphanus sativus cv GSK3-1
FY449170       --> CTTACATTTGGCATCCGGTGGCTCTGGCGGTGGCTCTTTACGCAATGGGT  Raphanus sativus cv GSK3-1
FY430345       --> CTTACATTTGGCATCCGGTGGCTCTGGCGGTGGCTCTTTACGCAATGGGT  Raphanus sativus cv GSK3-1
EY922396       --> CCTACATTTGGCATCCGGTAGCTCTGGCGGTGGCTCTTTACGCAATGGGT  Raphanus raphanistrum subsp. landra
EW713464       --> CCTACATTTGGCATCCGGTAGCTCTGGCGGTGGCTCTTTACGCAATGGGT  Raphanus sativus var. oleiformis
EW713465       --> CCTACATTTGGCATCCGGTAGCTCTGGCGGTGGCTCTTTACGCAATGGGT  Raphanus sativus var. oleiformis
EX902606       --> CCTACATTTGGCATCCGGTGGCTCTGGCGGTTGCTCTTTACGCAATGGGT  Raphanus sativus cv Rat-Tail Radish #3870
EV549164       --> CCTACATTTGGCATCCGGTGGCTCTGGCGGTGGCTCTTTACGCAATGGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748250       --> CTTACATTTGGCATCCGGTGGCTCTGGCGGTGGCTCTTTACGCAATGGGT  Raphanus raphanistrum subsp. maritimus

               801    -    851
UN15698        --> GGCTTCCCCTTCATCGTTTGGGGAATGGGTGTAAGAATAGTATGGGTATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718351       <-- GGCTTCCCCTTCATCGTTTGGGGAATGGGTGTAAGAATAGTATGGGTATA
FD982856       <-- GGCTTCCCCTTCATCGTTTGGGGAATGGGTGTAAGAATAGTATGGGTATA
EX752242       <-- GGCTTCCCCTTCATCGTTTGGGGAATGGGTGTAAGAATAGTATGGGTATA
EV544692       <-- GGCTTCCCCTTCATAGTTTGGGGAATGGGTGTAAGAATAGTATGGGTATA
EW718612       <-- GGCTTCCCCTTCATCGTTTGGGGAATGGGTGTAAGAATAGTATGGGTATA
EX774455       <-- GGCTTCCCCTTCATCGTTTGGGGAATGGGTGTAAGAATAGTATGGGTATA
FD553203       <-- GGCTTCCCCTTCATCGTTTGGGGAATGGGTGTAAGAATAGTATGGGTATA
EY918365       <-- GGCTTCCCCTTCATCGTTTGGGGAATGGGTGTAAGAATAGTATGGGTATA
FY454282       --> GGCTTCCCCTTCATCGTTTGGGGGATGGGTGTAAGAATAGTATGGGTATA
FY451183       --> GGC...............................................
FY431195       --> GGCTTCCCCTTCATCGTTTGGGGAATGGGTGTAAGAATAGTATGGGTATA
FY436183       --> ..................................................
FY451531       --> GGCTTCCCCTTCATCGTTTGGGGAATGGGTGTAAGAATAGTATGGGTATA
FY452481       --> GGCTTCCCCTTCATCGTTTGGGGAATGGGTGTAAGAATAGTATGGGTATA
FY452632       --> GGCTTCCCCTTCATCGTTTGGGGAATGGGTGTAAGAATAGTATGGGTATA
FY449170       --> GGCTTCCCCTTCATCGTTTGGGGAATGGGTGTAAGAATAGTATGGGTATA
FY430345       --> GGCTTCCCCTTCATCGTTTGGGGAATGGGTGTAAGAATAGTATGGGTATA
EY922396       --> GGCTTCCCCTTCATCGTTTGGGGAATGGGTGTAAGAATAGTATGGGTATA
EW713464       --> GGCTTCCCCTTCATCGTTTGGGGAATGGGTGTAAGAATAGTATGGGTATA
EW713465       --> GGCTTCCCCTTCATCGTTTGGGGAATGGGTGTAAGAATAGTATGGGTATA
EX902606       --> GGCTTCCCCTTCATCGTTTGGGGAATGGGTGTAAGGATAGTATGGGTATA
EV549164       --> GGCTTCCCCTTCATAGTTTGGGGAATGGGTGTAAGAATAGTATGGGTATA
EX748250       --> GGCTTCCCCTTCATCGTTTGGGGAATGGGTGTAAGAATAGTATGGGTATA

               851    -    901
UN15698        --> TCACATAACGTGGCTTGTAAACTCAGCTTGTCACGTTTGGGGAAACCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718351       <-- TCACATAACGTGGCTTGTAAACTCAGCTTGTCACGTTTGGGGAAACCAAG
FD982856       <-- TCACATAACGTGGCTTGTAAACTCAGCTTGTCACGTTTGGGGAAACCAAG
EX752242       <-- TCACATAACGTGGCTTGTAAACTCAGCTTGTCACGTTTGGGGAAACCAAG
EV544692       <-- TCACATAACGTGGCTAGTAAACTCAGCTTGTCACGTTTGGGGAAACCAAG
EW718612       <-- TCACATAACGTGGCTTGTAAACTCAGCTTGTCACGTTTGGGGAAACCAAG
EX774455       <-- TCACATAACGTGGCTTGTAAACTCAGCTTGTCACGTTTGGGGAAACCAAG
FD553203       <-- TCACATAACGTGGCTTGTAAACTCAGCTTGTCACGTTTGGGGAAACCAAG
EY918365       <-- TCACATAACGTGGCTTGTAAACTCAGCTTGTCACGTTTGGGGAAACCAAG
FY454282       --> TCACATAAC.........................................
FY451183       --> ..................................................
FY431195       --> TCACATAACGTGGCTTGTAAACTCAGCTTGTCACGTTTGGG.........
FY436183       --> ..................................................
FY451531       --> TCACATAACGTGGC....................................
FY452481       --> TCACATAACGTGGCTTGTAAACTCAGCTTGTCACGTTTGG..........
FY452632       --> TCACATAACGTGGCTTGGTAACTCAGCTTGTCACGT..............
FY449170       --> TCACATAACGTGGCTTGTAAACTCAGCTTGTCACGTTTGGGGAAACCAAG
FY430345       --> TCACATAACGTGGC....................................
EY922396       --> TCACATAACGTGGCTTGTAAACTCAGCTTGTCACGTTTGGGGAAACCAAG
EW713464       --> TCACATAACGTGGCTTGTAAACTCAGCTTGTCACGTTTGGGGAAACCAAG
EW713465       --> TCACATAACGTGGCTTGTAAACTCAGCTTGTCACGTTTGGGGAAACCAAG
EX902606       --> TCACATAACTTGGCTAGTAAACTCAGCTTGTCACGTTTGGGGAAACCAAT
EV549164       --> TCACATAACGTGGCTAGTAAACTCAGCTTGTCACGTTTGGGGAAACCAAG
EX748250       --> TCACATAACGTGGCTTGTAAACTCAGCTTGTCACGTTTGGGGAAACCAAG

               901    -    951
UN15698        --> CATGGAACACTGGAGATTTGTCTAAGAACAACTGGTGGGTAGCAGCTCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718351       <-- CTTGGAACACTGGAGATTTGTTTAAGAACAACTGGTGGGTAGCAGCTTTA  Raphanus sativus var. oleiformis
FD982856       <-- CATGGAACACTGGAGATTTGTCTAAGAACAACTGGTGGGTAGCAGCTCTA  Raphanus raphanistrum subsp. landra
EX752242       <-- CATGGAACACTGGAGATTTGTCTAAGAACAACTGGTGGGTAGCAGCTCTA  Raphanus raphanistrum subsp. maritimus
EV544692       <-- CATGGAACACTGGAGATTTGTCTAAGAACAACTGGTGGGTAGCAGCTCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW718612       <-- CTTGGAACACTGGAGATTTGTTTAAGAACAACTGGTGGGTAGCAGCTCTA  Raphanus sativus var. oleiformis
EX774455       <-- CATGGAACACTGGAGATTTGTCTAAGAACAACTGGTGGGTAGCAGCTCTA  Raphanus raphanistrum subsp. landra
FD553203       <-- CATGGAACACTGGAGATTTGTCTAAGAACAACTGGTGGGTAGCAGCTCTA  Raphanus raphanistrum subsp. landra
EY918365       <-- CATGGAACACTGGAGATTTGTCTAAGAACAACTGGTGGGTAGCAGCTCTA  Raphanus raphanistrum subsp. landra
FY454282       --> ..................................................  Raphanus sativus cv GSK3-1
FY451183       --> ..................................................  Raphanus sativus cv GSK3-1
FY431195       --> ..................................................  Raphanus sativus cv GSK3-1
FY436183       --> ..................................................  Raphanus sativus cv GSK3-1
FY451531       --> ..................................................  Raphanus sativus cv GSK3-1
FY452481       --> ..................................................  Raphanus sativus cv GSK3-1
FY452632       --> ..................................................  Raphanus sativus cv GSK3-1
FY449170       --> Ctt...............................................  Raphanus sativus cv GSK3-1
FY430345       --> ..................................................  Raphanus sativus cv GSK3-1
EY922396       --> CATGGAACACTGGAGATTTGTCTAAGAACAACTGGTGGGTAGC.......  Raphanus raphanistrum subsp. landra
EW713464       --> CTTGGAACACTGGAGATTTGTCTAAGAACAACTGGTGGGTAGCAGCTCTA  Raphanus sativus var. oleiformis
EW713465       --> CTTGGAACACTGGAGATTTGTCTAAGAACAACTGGTGGGTAGCAGCTCTA  Raphanus sativus var. oleiformis
EX902606       --> CATGGAACACTGGAGATTTGCCTAAGAACAACTGGTGGGTAGCAGCTCTA  Raphanus sativus cv Rat-Tail Radish #3870
EV549164       --> CATGGAACACTGGAGATTTGTCTAAGAACAACTGGTGGGTAGCAGCTCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748250       --> CATGGAACACTGGAGATTTGTCTAAGAACAACTGGTGGGTAGCAGCTCTA  Raphanus raphanistrum subsp. maritimus

               951    -   1001
UN15698        --> GCATTTGGAGAAGGATGGCACAACAATCACCATGCTTTCGAGTTCTCTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718351       <-- GCATTTGGAGAAGGATGGCACAACAATCACCATGCTTTCGAGTTTTTTGC
FD982856       <-- GCATTTGGAGAAGGATGGCACAACAATCACCATGCTTTCGAGTTCTCTGC
EX752242       <-- GCATTTGGAGAAGGATGGCACAACAATCACCATGCTTTCGAGTTCTCTGC
EV544692       <-- GCATTTGGAGAAGGATGGCACAACAATCACCATGCTTTCGAGTTTTCTGC
EW718612       <-- GCATTTGGAGAAGGATGGCACAACAATCACCATGCTTTCGAGTTTTCTGC
EX774455       <-- GCATTTGGAGAAGGATGGCACAACAATCACCATGCTTTCGAGTTCTCTTC
FD553203       <-- GCATTTGGAGAAGGATGGCACAACAATCACCATGCTTTCGAGTTCTCTGC
EY918365       <-- GCATTTGGAGAAGGATGGCACAACAATCACCATGCTTTCGAGTTTTCTGC
FY454282       --> ..................................................
FY451183       --> ..................................................
FY431195       --> ..................................................
FY436183       --> ..................................................
FY451531       --> ..................................................
FY452481       --> ..................................................
FY452632       --> ..................................................
FY449170       --> ..................................................
FY430345       --> ..................................................
EY922396       --> ..................................................
EW713464       --> GCATTTGGAGAAGGATGGCACAACAATCACCATGCTTTCGAGTTCTCTGC
EW713465       --> GCATTTGGAGAAGGATGGCACAACAATCACCATGCTTTCGAGTTCTCTGC
EX902606       --> GCATTTGGAGAAGGATGGCACAACAATCACCATGCTTTCGAGTTCTCTGC
EV549164       --> GCATTTGGAGAAGGATGGCACAACAATCACCATGCTTTCGAGTTCTCTGC
EX748250       --> GCATTTGGAGAAGGATGGCACAACAATCACCATGCTTTCGAGTTCTCTGC

               1001   -   1051
UN15698        --> TAGACATGGACTTGAATGGTGGCAATTTGATATGACTTGGTACGTCGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718351       <-- TAGACATGGACTTGAATGGTGGCAATTTGATATGACTTGGTACGTCGTTA  Raphanus sativus var. oleiformis
FD982856       <-- TAGACATGGACTTGAATGGTGGCAATTTGATATGACTTGGTACGTCGTTA  Raphanus raphanistrum subsp. landra
EX752242       <-- TCGACATGGACTTGAATGGTGGCAATTTGATATGACTTGGTACGTCGTTA  Raphanus raphanistrum subsp. maritimus
EV544692       <-- TCGACATGGACTTGAATGGTGGCAATTTGATATGACTTGGTACGTCGTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW718612       <-- TAGACATGGACTTGAATGGTGGCAATTTGATATGACTTGGTACGTCGTTA  Raphanus sativus var. oleiformis
EX774455       <-- TAGACATGGACTTAAATGGTGGCAATTTGATATGACTTGGTACGTCGTTA  Raphanus raphanistrum subsp. landra
FD553203       <-- TAGACATGGACTTGAATGGTGGCAATTTGATATGACTTGGTACGTCGTTA  Raphanus raphanistrum subsp. landra
EY918365       <-- TAGACATGGACTTGAATGGTGGCAATTTGATATGACTTGGTACGTCGTTA  Raphanus raphanistrum subsp. landra
FY454282       --> ..................................................  Raphanus sativus cv GSK3-1
FY451183       --> ..................................................  Raphanus sativus cv GSK3-1
FY431195       --> ..................................................  Raphanus sativus cv GSK3-1
FY436183       --> ..................................................  Raphanus sativus cv GSK3-1
FY451531       --> ..................................................  Raphanus sativus cv GSK3-1
FY452481       --> ..................................................  Raphanus sativus cv GSK3-1
FY452632       --> ..................................................  Raphanus sativus cv GSK3-1
FY449170       --> ..................................................  Raphanus sativus cv GSK3-1
FY430345       --> ..................................................  Raphanus sativus cv GSK3-1
EY922396       --> ..................................................  Raphanus raphanistrum subsp. landra
EW713464       --> TAGACATGGACTTGAATGGTGGCAATTTGATATGACTTGGTACGTCGTTA  Raphanus sativus var. oleiformis
EW713465       --> TAGACATGGACTTGAATGGTGGCAATTTGATATGACTTGGTACGTCGTTA  Raphanus sativus var. oleiformis
EX902606       --> TCGACATGGACTTGAATGGTGGCAATTTGATATGACTTGGTACGTCGTTA  Raphanus sativus cv Rat-Tail Radish #3870
EV549164       --> TCGACATGGACTTGAATGGTGGCAATTTGATATGACTTGGTACGTCGTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748250       --> TCGACATGGACTTGAATGGTGGCAATTTGATATGACTTGGTACGTCGTTA  Raphanus raphanistrum subsp. maritimus

               1051   -   1101
UN15698        --> GATTCCTCCAAGCCATTGGCTTAGCAACCGATGTTAAGCTGCCATCAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718351       <-- GATTCCTCCAAGCCATTGGCTTAGCAACCGATGTTAAGCTGCCATCAGAA
FD982856       <-- GATTCCTCCAAGCCATTGGCTTAGCAACCGATGTTAAGCTGCCATCAGAA
EX752242       <-- GATTCCTCCAAGCCATTGGCTTAGCAACCGATGTTAAGCTGCCATCAGAA
EV544692       <-- GATTCCTCCAAGCCATTGGATTAGCAACCGATGTTAAGCTGCCATCAGAA
EW718612       <-- GATTCCTCCAAGCCATTGGCTTAGCAACCGATGTTAAGCTGCCATCAGAA
EX774455       <-- GATTCCTCCAAGCCATTGGCTTAGCAACCGATGTTAAGCTGCCATCAGAA
FD553203       <-- GATTCCTCCAAGCCATTGGCTTGGCAACCGATGTTAAGCTGCCATCAGAA
EY918365       <-- GATTCCTCCAAGCCATTGGCTTAGCAACCGATGTTAAGCTGCCATCAGAA
FY454282       --> ..................................................
FY451183       --> ..................................................
FY431195       --> ..................................................
FY436183       --> ..................................................
FY451531       --> ..................................................
FY452481       --> ..................................................
FY452632       --> ..................................................
FY449170       --> ..................................................
FY430345       --> ..................................................
EY922396       --> ..................................................
EW713464       --> GATTCCTCCAAGCCATTGGCTTAGCAACCGATGTTAAGCTGCCATCAGAA
EW713465       --> GATTCCTCCAAGCCATTGGCTTAGCAACCGATGTTAAGCTGCCATCAGAA
EX902606       --> GAT-CCTCCAAGCCGTTGG-ATAGCAACCGATGTTAAGCTTCCATCAGAA
EV549164       --> GATTCCTCCAAGCCATTGGATTAGCAACCGATGTTAAGCTGCCATCAGAA
EX748250       --> GATTCCTCCAAGCCATTGGCTTAGCAACCGATGTTAAGCTGCCATCAGAA

               1101   -   1151
UN15698        --> GCTCAGAAAGAAAGAATGGCACTTACCACCAGTGATTGATGATAGTACGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718351       <-- GCTCAGAAAGAAAGAATGGCACTTACCACCAGTGATTGATGATAGTACGT
FD982856       <-- GCTCAGAAAGAAAGAATGGCACTTACCACCAGTGATTGATGATAGTACGT
EX752242       <-- GCTCAGAAAGAAAGAATGGCACTTACCACCAGTGATTGATGATAGTACGT
EV544692       <-- GCTCAGAAAGAAAGAATGGCACTTACCACCAGTGATTGATGATAGTACGT
EW718612       <-- GCTCAGAAAGAAAGAATGGCACTTACCACCAGTGATTGATGATAGTACGT
EX774455       <-- GCTCAGAAAGAAAGAATGGCACTTACCACCAGTGATTGATGATAGTACGT
FD553203       <-- GCTCAGAAAGAAAGAATGGCACTTACCATCAGTGATTGATGATAGTACGT
EY918365       <-- GCTCAGAAAGAAAGAATGGCACTTACCACCAGTGATTGATGATAGTACGT
FY454282       --> ..................................................
FY451183       --> ..................................................
FY431195       --> ..................................................
FY436183       --> ..................................................
FY451531       --> ..................................................
FY452481       --> ..................................................
FY452632       --> ..................................................
FY449170       --> ..................................................
FY430345       --> ..................................................
EY922396       --> ..................................................
EW713464       --> GCTCAGAAAGAAAGAATGGCACTTACCACCAGTGATTGATGATAGTACGT
EW713465       --> GCTCAGAAAGAAAGAATGGCACTTACCACCAGTGATTGATGATAGTACGT
EX902606       --> GCTCAGAAAGAAAGA-TGGCACTTACAACCAGTGATTGATGATAGTACGT
EV549164       --> GCTCAGAAAGAAAGAATGGCACTTACCACCAGTGATTGATGATAGTACGT
EX748250       --> GCTCAGAAAGAAAGAATGGCACTTACCACCAGTGATTGATGATAGTACGT

               1151   -   1201
UN15698        --> AGTAACTATGTGCTCACCACCGGAATCAAAA-CTGTTGTACGTTTCGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718351       <-- AGTAACTATGTGCTCCCCCCCGGAATCAAAA-CTGTTGTACGTTTCGAGC  Raphanus sativus var. oleiformis
FD982856       <-- AGTAACTATGTGCTCACCACCGGAATCAAAA-CTGTTGTACGTTTCGAGC  Raphanus raphanistrum subsp. landra
EX752242       <-- AGTAACTATGTGGTCCCCCCCGGAATCAAAAACTGTTGTACGTTTCGAGC  Raphanus raphanistrum subsp. maritimus
EV544692       <-- AGCAACTATGTGGTCAACATCGGAATCAAAA-CTGTTGTACGTTTCGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW718612       <-- AGTAACTATGTGCTCACCACCGGAATCAAAA-CTGTTGTACGTTTCGAGC  Raphanus sativus var. oleiformis
EX774455       <-- AGTAACTATGTGCTCACCACCGGAATCAAAA-CTGTTGTACGTTTCGAGC  Raphanus raphanistrum subsp. landra
FD553203       <-- AGTAACTATGTGCTCACCACCGGAATCAAAA-CTGTTGTACGTTTCGAGC  Raphanus raphanistrum subsp. landra
EY918365       <-- AGTAACTATGTGCTCACCACCGGAATCAAAA-CTGTTGTACGTTTCGAGC  Raphanus raphanistrum subsp. landra
FY454282       --> ..................................................  Raphanus sativus cv GSK3-1
FY451183       --> ..................................................  Raphanus sativus cv GSK3-1
FY431195       --> ..................................................  Raphanus sativus cv GSK3-1
FY436183       --> ..................................................  Raphanus sativus cv GSK3-1
FY451531       --> ..................................................  Raphanus sativus cv GSK3-1
FY452481       --> ..................................................  Raphanus sativus cv GSK3-1
FY452632       --> ..................................................  Raphanus sativus cv GSK3-1
FY449170       --> ..................................................  Raphanus sativus cv GSK3-1
FY430345       --> ..................................................  Raphanus sativus cv GSK3-1
EY922396       --> ..................................................  Raphanus raphanistrum subsp. landra
EW713464       --> AGTAACTATGTGCTCACCACCGGAATCAAAA-CTGTTGTACG........  Raphanus sativus var. oleiformis
EW713465       --> AGTAACTATGTGCTCACCACCGGAATCAAAA-CTGTTGTACGTTTCGAGC  Raphanus sativus var. oleiformis
EX902606       --> AGTAACTATGTGGTCACacg..............................  Raphanus sativus cv Rat-Tail Radish #3870
EV549164       --> AGCAACTATGTGGTCAACATCGGAATCAAAA-CTGTTGTACGTTTCGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX748250       --> AGTAACTATGTGGTCACCACCGGAATCAAAAACTGTTGTACGTTTCGAGC  Raphanus raphanistrum subsp. maritimus

               1201   -   1251
UN15698        --> TATGAAAAATTAAAAGAGTTTTTGTTTTTTT-GGGTGCCTTTACATATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718351       <-- TATG..............................................
FD982856       <-- TATGAAAAATTAAA....................................
EX752242       <-- TATGAAAAATTAAAAGAGTTTTTGTCTTTTT-GGGTGCCTTTAC......
EV544692       <-- TATGAAAAATTAAA-GAGTTTTTGTTTTT---TGGTGTCTTTACATATAA
EW718612       <-- TATGAAAAATTAAAAGAGTTTTTGTTTTTTTTGGGTGCCTTTACATATAA
EX774455       <-- TATGAAAAATTAAAAGAGTTTTTGTTTTTTT-GGGTGCCTTTACATATAA
FD553203       <-- TATGAAAAATTAAAAGAGTTTTTGTTTTTTT-GGGTGCCTTTAC......
EY918365       <-- TATGAAAAATTAAAAGAGTTTTTGTTTTTTT-GGGTGCCTTTACATATAA
FY454282       --> ..................................................
FY451183       --> ..................................................
FY431195       --> ..................................................
FY436183       --> ..................................................
FY451531       --> ..................................................
FY452481       --> ..................................................
FY452632       --> ..................................................
FY449170       --> ..................................................
FY430345       --> ..................................................
EY922396       --> ..................................................
EW713464       --> ..................................................
EW713465       --> TATGAAAAATTAAAAGAGTTTTTGTTTTTTTTGGGTGCCTTTACATATAA
EX902606       --> ..................................................
EV549164       --> TATGAAAAATTAAA-GAGTTTTTGTTTTTT---GGTGTCTTTACATATAA
EX748250       --> TATGAAAA-TTAAAAGAGTTTTTGTCTTTTT-GGGTGCCTTTACATATAA

               1251   -   1301
UN15698        --> ACGTATATATGTTCTATGCAAGAGAGTGTATGTGAACAAAACTGATTATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718351       <-- ..................................................
FD982856       <-- ..................................................
EX752242       <-- ..................................................
EV544692       <-- ACGTATATATGTTCTATGCAAGAGAGTGTA....................
EW718612       <-- ACGTATATATGTTCTATGCAAGAGAGTGTATGTGAACAAAACTGATTATG
EX774455       <-- ACGTATATATGTTCTATGCAAGAGAGTGTATGTGAACAAAACTGATTATG
FD553203       <-- ..................................................
EY918365       <-- ACGTATATATGTTCTATGCAAGAGAGTGTATGTGAACAAAACTGATTATG
FY454282       --> ..................................................
FY451183       --> ..................................................
FY431195       --> ..................................................
FY436183       --> ..................................................
FY451531       --> ..................................................
FY452481       --> ..................................................
FY452632       --> ..................................................
FY449170       --> ..................................................
FY430345       --> ..................................................
EY922396       --> ..................................................
EW713464       --> ..................................................
EW713465       --> ACGTATATATGTTCTATGCAAGAGAGTGTATGTGAACAAAACTGATT...
EX902606       --> ..................................................
EV549164       --> ACGTATATATGTTCTATGCAAGAGAGTGTATGcga...............
EX748250       --> ACGTATATATGTTCTATGCA-GAGAGTGTATGTGATCAAActg.......

               1301   -   1351
UN15698        --> AATTTTAAGTTTTATCTTCTTATTACATTCAATACACAAGAAACTGATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718351       <-- ..................................................
FD982856       <-- ..................................................
EX752242       <-- ..................................................
EV544692       <-- ..................................................
EW718612       <-- AATTTTAAGTTTTATCTTCc..............................
EX774455       <-- AA................................................
FD553203       <-- ..................................................
EY918365       <-- AATTTTAAGTTTTATCTTCTTATTACATTCAATACACAAGAAACTGATTA
FY454282       --> ..................................................
FY451183       --> ..................................................
FY431195       --> ..................................................
FY436183       --> ..................................................
FY451531       --> ..................................................
FY452481       --> ..................................................
FY452632       --> ..................................................
FY449170       --> ..................................................
FY430345       --> ..................................................
EY922396       --> ..................................................
EW713464       --> ..................................................
EW713465       --> ..................................................
EX902606       --> ..................................................
EV549164       --> ..................................................
EX748250       --> ..................................................

               1351   -   1401
UN15698        --> T
                   ~
EW718351       <-- .
FD982856       <-- .
EX752242       <-- .
EV544692       <-- .
EW718612       <-- .
EX774455       <-- .
FD553203       <-- .
EY918365       <-- T
FY454282       --> .
FY451183       --> .
FY431195       --> .
FY436183       --> .
FY451531       --> .
FY452481       --> .
FY452632       --> .
FY449170       --> .
FY430345       --> .
EY922396       --> .
EW713464       --> .
EW713465       --> .
EX902606       --> .
EV549164       --> .
EX748250       --> .