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Alignment for radish unigene UN15754

               1      -     51
UN15754        --> TTTTTAGAAACGGAAAAAAATAATCTCCTCTTGGGCGGTCGTCTTCTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911161       <-- ................................GGGCGGTCGTCTTCTGCA
FD552979       <-- .......................................CGTCTTCTGCA
EY936034       <-- ..................................................
EV530977       <-- ..................................................
EY935246       <-- ..................................................
EY917818       <-- ..................................................
FD548338       --> TTTTTAGAAACGGAAAAAAATAATCTCCTCTTTCGCGGTCGTCTTCTGCA
EY915285       --> ................................GGGCGGTCGTCTTCTGCA
EY921724       --> ................................GGGCGGTCGTCTTCTGCA
EY940245       --> ................................GGGCGGTCGTCTTCTGCA
EV528271       --> .................................GGCGGTCGTCTTCTGCA
FD556731       --> .......................................CGTCTTCTGCA
EY939279       --> ..................................................

               51     -    101
UN15754        --> AGCTAAGCTCCTCTTTCGATTTCAGCAG-AGA--GATGTCAGCGTACGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911161       <-- AGCTAAGCTCCTCTTTCGATTTCAGCAG-AGA--GATGTCAGCGTACGAA
FD552979       <-- AGCTAAGCTCCTCTTTCGATTTCAGCAG-AGA--GATGTCAGCGTACGAA
EY936034       <-- .........................CAG-AGA--GATGTCAGCGTACGAA
EV530977       <-- ..................................................
EY935246       <-- ..................................................
EY917818       <-- ..................................................
FD548338       --> AGCTAAGCTCCTCTTTCGATTTCAGCAG-AGA--GATGTCAGCGTACGAA
EY915285       --> AGCTAAGCTCCTCTTTCGATTTCAGCAG-AGA--GATGTCAGCGTACGAA
EY921724       --> AGCTAAGCTCCTCTTTCGATTTCAGCAGCAGATAGATGTCTGCGTACGAA
EY940245       --> AGCTAAGCTCCTCTTTCGATTTCAGCAG-AGA--GATGTCAGCGTACGAA
EV528271       --> AGCTAAGCTCCTCTTTCAATTTCAGCAG-AGA--GATGTCAGCGTACGAA
FD556731       --> AGCTAAGCTCCTCTTTCGATTTCAGCAG-AGA--GATGTCAGCGTACGAA
EY939279       --> ..................................................

               101    -    151
UN15754        --> AATGTTATTGGTGGGAAGCTAAAGCTGAAAGGGAAGGCTTTAGATGTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911161       <-- AATGTTATTGGTGGGAAGCTAAAGCTGAAAGGGAAGGCTTTAGATGTGAA
FD552979       <-- AATGCTATTGGTGGGAAGCTAAAGCTGAAAGGGAAGGCTTTAGATGTGAA
EY936034       <-- AATGTTATTGGTGGGAAGCTAAAGCTGAAAGGTAAGGCTTTAGATGTGAA
EV530977       <-- ..................................................
EY935246       <-- ..................................................
EY917818       <-- ..................................................
FD548338       --> AATGTTATTGGTGGGAAGCTAAAGCTGAAAGGGAAGGCTTTAGATGTGAA
EY915285       --> AATGTTATTGGTGGGAAGCTAAAGCTGAAAGGGAAGGCTTTAGATGTGAA
EY921724       --> AATGTTATTGGTGGGAAGCTAAAGCTGAAAGGGAAGGCTTTAGATGTGAA
EY940245       --> AATGTTATTGGTGGGAAGCTAAAGCTGAAAGGTAAGGCTTTAGATGTGAA
EV528271       --> AATGTTATTGGTGGGAAGCTAAAGCTGAAAGGGAAGGCTTTAGATGTGAA
FD556731       --> AATGCTATTGGTGGGAAGCTAAAGCTGAAAGGGAAGGCTTTAGATGTGAA
EY939279       --> ..................................................

               151    -    201
UN15754        --> AGCAGGTGGAGTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA-----
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911161       <-- AGCAGGTGGAGTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA-----  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552979       <-- AGCAGGTGGAGTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA  Raphanus raphanistrum subsp. landra
EY936034       <-- AGCAGGTGGAGTGAAGAAGAAGAAGAAGAAGAAGAAGAAG---AA-----  Raphanus sativus cv Early Scarlet Globe
EV530977       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY935246       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY917818       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD548338       --> AGCAGGTGGAGTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA-----  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915285       --> AGCAGGTGGAGTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA-----  Raphanus raphanistrum subsp. raphanistrum (NY)
EY921724       --> AGCAGGTGGAGTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA---GA  Raphanus raphanistrum subsp. landra
EY940245       --> AGCAGGTGGAGTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA--------  Raphanus sativus cv Early Scarlet Globe
EV528271       --> AGCAGGTGGAGTGAAGAAGAAGAAGAAGAAGAAGAAGAA-----------  Raphanus raphanistrum subsp. maritimus
FD556731       --> AGCAGGTGGAGTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA  Raphanus raphanistrum subsp. landra
EY939279       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               201    -    251
UN15754        --> -ACAGGAAGAGCAAGCTCTTAAAATTACTGAACATGAACACATAGAAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911161       <-- -ACAGGAAGAGCAAGCTCTTAAAATTACTGAACATGAACACATAGAAGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552979       <-- AACAGGAAGAGCAAGCTCTTAAAATTACTGAACATGAACACATAGAAGGA  Raphanus raphanistrum subsp. landra
EY936034       <-- -ACGGGAAGAGCAAGCTCTTAAAATTACTGAACATGAACACATAGAAGGA  Raphanus sativus cv Early Scarlet Globe
EV530977       <-- ...................TAAAATTACTGAACATGAACACATAGAAGGA  Raphanus raphanistrum subsp. maritimus
EY935246       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY917818       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD548338       --> -ACAGGAAGAGCAAGCTCTTAAAATTACTGAACATGAACACATAGAAGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915285       --> -ACAGGAAGAGCAAGCTCTTAAAATTACTGAACATGAACACATAGAAGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY921724       --> AACAGGAAGAGCAAGCTCTTAAAATTACTGAACATGAACACATAGAAGGA  Raphanus raphanistrum subsp. landra
EY940245       --> -ACGGGAAGAGCAAGCTCTTAAAATTACTGAACATGAACACATAGAAGGA  Raphanus sativus cv Early Scarlet Globe
EV528271       --> -ACAGGAAGAGCAAGCTCTTAAAATTACTGAACATGAACACATAGAAGGA  Raphanus raphanistrum subsp. maritimus
FD556731       --> AACAGGAAGAGCAAGCTCTTAAAATTACTGAACATGAACACATAGAAGGA  Raphanus raphanistrum subsp. landra
EY939279       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               251    -    301
UN15754        --> GGAAACGAAGAAGCATTGGGTAAATTGATTGAAGGAGGAGAAGAAGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911161       <-- GGAAACGAAGAAGCATTGGGTAAATTGATTGAAGGAGGAGAAGAAGAAGA
FD552979       <-- GGAAACGAAGAAGCATTGGGTAAATTGATTGAAGGAGGAGAAGAAGAAGA
EY936034       <-- GGAAACGAAGAAGCATTGGGTAAATTGATTGAAGGAGGAGAAGAAGAAGA
EV530977       <-- GGAAACGAAGAAGCATTGGGTAAATTGATTGAAGGAGGAGAAGAAGAAGA
EY935246       <-- ..................................................
EY917818       <-- ..................................................
FD548338       --> GGAAACGAAGAAGCATTGGGTAAATTGATTGAAGGAGGAGAAGAAGAAGA
EY915285       --> GGAAACGAAGAAGCATTGGGTAAATTGATTGAAGGAGGAGAAGAAGAAGA
EY921724       --> GGAAACGAAGAAGCATTGGGTAAATTGATTGAAGGAGGAGAAGAAGAAGA
EY940245       --> GGAAACGAAGAAGCATTGGGTAAATTGATTGAAGGAGGAGAAGAAGAAGA
EV528271       --> GGAAACGAAGAAGCATTGGGTAAATTGATTGAAGGAGGAGAAGAAGAAGA
FD556731       --> GGAAACGAAGAAGCATTGGGTAAATTGATTGAAGGAGGAGAAGAAGAAGA
EY939279       --> ..................................................

               301    -    351
UN15754        --> TGAGGAGGGTAGGAGTGAAAAGGAGGATGGAAAAGTGCAACCTGATGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911161       <-- TGAGGAGGGTAGGAGTGAAAAGGAGGATGGAAAAGTGCAACATGATGATG
FD552979       <-- TGAGGAGGGTAGGAGTGAAAAGGAGGATGGAAAAGTGCAACCTGATGATG
EY936034       <-- TGAGGAGGGTAGGAGTGAAAAGGAGGATGGAAAAGTGCAACCTGATGATG
EV530977       <-- TGAGGAGGGTAGGAGTGAAAAGGAGGATGGAAAAGTGCAACCTGATGATG
EY935246       <-- ..................................................
EY917818       <-- ..................................................
FD548338       --> TGAGGAGGGTAGGAGTGAAAAGGAGGATGGAAAAGTGCAACCTGATGATG
EY915285       --> TGAGGAGGGTAGGAGTGAAAAGGAGGATGGAAAAGTGCAACATGATGATG
EY921724       --> TGAGGAGGGTAGGAGTGAAAAGGAGGATGGAAAAGTGCAACCTGATGATG
EY940245       --> TGAGGAGGGTAGGAGTGAAAAGGAGGATGGAAAAGTGCAACCTGATGATG
EV528271       --> TGAGGAGGGTAGGAGTGAAAAGGAGGATGGAAAAGTGCAACCTGATGATG
FD556731       --> TGAGGAGGGTAGGAGTGAAAAGGAGGATGGAAAAGTGCAACCTGATGATG
EY939279       --> ..................................................

               351    -    401
UN15754        --> ATGATCTGTTAACGCCTGCGGAAAGACGGTACATAGAGCAGAAGCAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911161       <-- ATGATCTGTTAACGCCTGCGGAAAGACGGTACATAGAGCAGAAGCAGAAA
FD552979       <-- ATGATCTGTTAACGCCTGCGGAAAGACGGTACATAGAGCAGAAGCAGAAA
EY936034       <-- ATGATCTGTTAACGCCTGCGGAAAGACGGTACATAGAGCAGAAGCAGAAA
EV530977       <-- ATGATTTGTTAACGCCTGGGGAAAGACGGTACATAGAGCAGAAGCAGAAA
EY935246       <-- ..................................................
EY917818       <-- ..................................................
FD548338       --> ATGATCTGTTAACGCCTGCGGAAAGACGGTACATAGAGCAGAATCAGAAA
EY915285       --> ATGATCTGTTAACGCCTGCGGAAAGACGGTACATAGAGCAGAAGCAGAAA
EY921724       --> ATGATCTGTTAACGCCTGCGGAAAGACGGTACATAGAGCAGAAGCAGAAA
EY940245       --> ATGATCTGTTAACGCCTGCGGAAAGACGGTACATAGAGCAGAAGCAGAAA
EV528271       --> ATGATCTGTTAACGCCTGCGGAAAGACGGTACATAGAGCAGAAGCAGAAA
FD556731       --> ATGATCTGTTAACGCCTGCGGAAAGACGGTACATAGAGCAGAAGCAGAAA
EY939279       --> ..................................................

               401    -    451
UN15754        --> TTGGATGTGCAGAAACTAGCAAAGGAAGCGAACAAGTCTCACCGTAACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911161       <-- TTGGATGTGCAGAAACTAGCAAAGGAAGCGAACAAGTCTCACCGTAACAG
FD552979       <-- TTGGATGTGCAGAAACTAGCAAAGGAAGCTAACAAGTCTCACCGTAACAG
EY936034       <-- TTGGATGTGCAGAAACTAGCAAAGGAAGCGAACAAGTCTCACCGTAACAG
EV530977       <-- CTGGATGTGCAGAAACTAGCCAAGGAAGGGAACAAGTCTCCCCGTAACAG
EY935246       <-- ..................................................
EY917818       <-- ..................................................
FD548338       --> TTGGATGTGCAGAAACTAGCAAAGGAAGCGAACAAGTCTCACCGTAACAG
EY915285       --> TTGGATGTGCAGAAACTAGCAAAGGAAGCGAACAAGTCTCACCGTAACAG
EY921724       --> TTGGATGTGCAGAAACTAGCAAAGGAAGCGAACAAGTCTCACCGTAACAG
EY940245       --> TTGGATGTGCAGAAACTAGCAAAGGAAGCGAACAAGTCTCACCGTAACAG
EV528271       --> CTGGATGTGCAGAAACTAGCCAAGGAAGCGAACAAGTCTCACCGTAACAG
FD556731       --> TTGGATGTGCAGAAACTAGCAAAGGAAGCTAACAAGTCTCACCGTAACAG
EY939279       --> ..................................................

               451    -    501
UN15754        --> GATTGAGGATTTCAATCAGTATCTGGCTAACATGAGTGAGCATTACGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911161       <-- GATTGAGGATTTCAATCAGTATCTGGCTAACATGAGTGAGCATTACGATA
FD552979       <-- GATTGAGGATTTCAATCAGTATCTGGCTAACATGAGTGAGCATTACGATA
EY936034       <-- GATTGAGGATTTCAATCAGTATCTGGCTAACATGAGTGAGCATTACGATA
EV530977       <-- GATTGAGGATTTCAATCAGTATTTGGCTAACATGAGTGAGCATTACGATA
EY935246       <-- .......................TGGCTAACATGAGTGAGCATTACGATA
EY917818       <-- ..................................................
FD548338       --> GATTGAGGATTTCAATCAGTATCTGGCTAACATGAGTGAGCATTACGATA
EY915285       --> GATTGAGGATTTCAATCAGTATCTGGCTAACATGAGTGAGCATTACGATA
EY921724       --> GATTGAGGATTTCAATCAGTATCTGGCTAACATGAGTGAGCATTACGATA
EY940245       --> GATTGAGGATTTCAATCAGTATCTGGCTAACATGAGTGAGCATTACGATA
EV528271       --> GATTGAGGATTTCAATCAGTATCTGGCTAACATGAGTGAGCATTACGATA
FD556731       --> GATTGAGGATTTCAATCAGTATCTGGCTAACATGAGTGAGCATTACGATA
EY939279       --> ...........................................TACGATA

               501    -    551
UN15754        --> TCCCTAAAGTCGGACCTGGTTAAATCAACTTCTTCCTTGTCTCTCTCTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911161       <-- TCCCTAAAGTCGGACCTGGTTAAATCAACTTCTTCCTTGTCTCTCTCTGC
FD552979       <-- TCCCTAAAGTCGGACCTGGTTAAATCAACTTCTTCCTTGTCTCTCTCTGC
EY936034       <-- TCCCTAAAGTCGGACCTGGTTAAATCAACTTCTTCCTTGTCTCTCTCTGC
EV530977       <-- TCCCTAAAGTCGGACCTGGTTAAATCAACTTTTTCCTTGTCTCTTTTTGC
EY935246       <-- TCCCTAAAGTCGGACCTGGTTAAATCAACTTTTTCCTTGTCTCTTTTTGC
EY917818       <-- .........TCGGACCTGGTTAAATCAACTTCTTCCTTGTCTCTCTCTGC
FD548338       --> TCCCTAAAGTCGGACCTGGTTAAATCAACTTCTTCCTTGTCTCTCTCTGC
EY915285       --> TCCCTAAAGTCGGACCTGGTTAAATCAACTTCTTCCTTGTCTCTCTCTGC
EY921724       --> TCCCTAAAGTCGGACCTGGTTAAATCAACTTCTTCCTTGTCTCTCTCTGC
EY940245       --> TCCCTAAAGTCGGACCTGGTTAAATCAACTTCTTCCTTGTCTCTCTCTGC
EV528271       --> TCCCTAAAGTCGGACCTGGTTAAATCAACTTCTTCCTTGTCTCTCTCTGC
FD556731       --> TCCCTAAAGTCGGACCTGGTTAAATCAACTTCTTCCTTGTCTCTCTCTGC
EY939279       --> TCCCTAAAGTCGGACCTGGTTAAATCAACTTCTTCCTTGTCTCTCTCTGC

               551    -    601
UN15754        --> TTATTTCAGTTTGGCATTGTCGAACAGCTACTGTTGTTGGATCTCTCGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911161       <-- TTATTTCAGTTTGGCATTGTCGAACAGCTACTGTTGTTGGATCTCTCGTG
FD552979       <-- TTATTTCAGTTTGGCATTGTCGAACAGCTACTGTTGTTGGATCTCTCGTG
EY936034       <-- TTATTTCAGTTTGGCATTGTCGAACAGCTACTGTTGTTGGATCTCTCGTG
EV530977       <-- TTATTTCAGTTTGGCATTGTCGAACAGCTACTGTTGTTGGATCTCTCGTG
EY935246       <-- TTATTTCAGTTTGGCATTGTCGAACAGCTACTGTTGTTGGATCTCTCGTG
EY917818       <-- TTATTTCAGTTTGGCATTGTCGAACAGCTACTGTTGTTGGATCTCTCGTG
FD548338       --> TTATTTCAGTTTGGCATTGTCGAACAGCTACTGTTGTTGGATCTCTCGTG
EY915285       --> TTATTTCAGTTTGGCATTGTCGAACAGCTACTGTTGTTGGATCTCTCGTG
EY921724       --> TTATTTCAGTTTGGCATTGTCGAACAGCTACTGTTGTTGGATCTCTCGTG
EY940245       --> TTATTTCAGTTTGGCATTGTCGAACAGCTACTGTTGTTGGATCTCTCGTG
EV528271       --> TTATTTCAGTTTGGCATTGTCGAACAGCTACTGTTGTTGGATCTCTCGTG
FD556731       --> TTATTTCAGTTTGGCATTGTCGAACAGCTACTGTTGTTGGATCTCTCGTG
EY939279       --> TTATTTCAGTTTGGCATTGTCGAACAGCTACTGTTGTTGGATCTCTCGTG

               601    -    651
UN15754        --> TTATTCCCATAACTTTGCTATTATATGGCCTCTGCTCTTTTCTATGATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911161       <-- TTATTCCCATAACTTTGCT...............................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552979       <-- TTATTCCCATAACTTTGCTATTATATGGCCTCTGTTCTTTTCc.......  Raphanus raphanistrum subsp. landra
EY936034       <-- TTATTCCCATAACTTTGCTATTATATGGCCTCTGCTCTTTTCTATGATGG  Raphanus sativus cv Early Scarlet Globe
EV530977       <-- TTATTCCCATAACTTTGCTATTATATGG......................  Raphanus raphanistrum subsp. maritimus
EY935246       <-- TTATTCCCATAACTTTGCTATTATATGGCC....................  Raphanus sativus cv Early Scarlet Globe
EY917818       <-- TTATTCCCATAACTTTGCTATTATATGGCCTCTGTTCTTTTCTATGATGG  Raphanus raphanistrum subsp. landra
FD548338       --> TTATTCCCATAACTTTGCTATTATATGGCCTCTGCTC.............  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915285       --> TTATTCCCATAACTTTGCT...............................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY921724       --> TTATTCCCATAACTTTGCTATTATATGGCCTCTGTTCTTTTCTATGATGG  Raphanus raphanistrum subsp. landra
EY940245       --> TTATTCCCATAACTTTGCTATTATATGGCCTCTGCTCTTTTCTATGATGG  Raphanus sativus cv Early Scarlet Globe
EV528271       --> TTATTCCCATAACTTTGCTATTATATGGCCTCTGCTCTTTT.........  Raphanus raphanistrum subsp. maritimus
FD556731       --> TTATTCCCATAACTTTGCTATTATATGGCCTCTGTTCTTTTCcaaaaa..  Raphanus raphanistrum subsp. landra
EY939279       --> TTATTCCCATAACTTTGCTATTATATGGCCTCTGCTCTTTTCTATGATGG  Raphanus sativus cv Early Scarlet Globe

               651    -    701
UN15754        --> ACACATTTTCGTGGAATGTTCACTCTTCCTCCTTCCTCCTGTATCTTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911161       <-- ..................................................
FD552979       <-- ..................................................
EY936034       <-- ACACATTTTCGTGGAATGTTCACTCTTCCTCCTTCCTCCTGTATCTTTCA
EV530977       <-- ..................................................
EY935246       <-- ..................................................
EY917818       <-- ACACATTTTCGTGGAATGTTCACTCTTTCTCCTTCCTCCTGTATCTCTCA
FD548338       --> ..................................................
EY915285       --> ..................................................
EY921724       --> ACACATTTTCGTGGAATGTTCACTCTTTCTCCTTCCTCCTGTATCTCTCA
EY940245       --> ACACATTTTCGTGGAATGTTCACTCTTCCTCCTTCCTCCTGTATCTTTCA
EV528271       --> ..................................................
FD556731       --> ..................................................
EY939279       --> ACATATTTTCGTGGAATGTTCACTCTTCCTCCTTCCTCCTGTATCTTTCG

               701    -    751
UN15754        --> GTTTCCAAACTTTTTCTATTTTCTCAATCACAAAACAATTTTTTTCAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911161       <-- ..................................................
FD552979       <-- ..................................................
EY936034       <-- GTTTCCAAACTTTTTCTATTTTCTCAATCACAAAACAATTTTTTTCc...
EV530977       <-- ..................................................
EY935246       <-- ..................................................
EY917818       <-- GTTTCCAAACTTTTTCTATTTTCTCAATCACAAAACAATTTTTTTCAACA
FD548338       --> ..................................................
EY915285       --> ..................................................
EY921724       --> GTTTCCAAACTTTTTCTATTTTCTCAATCACAAAACAATTTTTT-CAACA
EY940245       --> GTTTCCAAACTTTTTCTATTTTCTCAATCACAAAc...............
EV528271       --> ..................................................
FD556731       --> ..................................................
EY939279       --> GTTTCCAAACTTTTTCTATTTTCTCAATCAC...................

               751    -    801
UN15754        --> GTGGTCTATATGTGCTTGATGTTCGCAGTAACTACACCTCTCGGGATAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911161       <-- ..................................................
FD552979       <-- ..................................................
EY936034       <-- ..................................................
EV530977       <-- ..................................................
EY935246       <-- ..................................................
EY917818       <-- GTGGTCTATATGTGCTTGATGTTCGCAGTAACTACACCTCTCGGGATAGT
FD548338       --> ..................................................
EY915285       --> ..................................................
EY921724       --> GTGGTCTATATGTGCTTGATGTTCGCAGTA-CTACAC-TCTCGGGATAGT
EY940245       --> ..................................................
EV528271       --> ..................................................
FD556731       --> ..................................................
EY939279       --> ..................................................

               801    -    851
UN15754        --> ACTTGGGATGATGATTTTCGCAGCGACCGGTTACGATGACCAGAACCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911161       <-- ..................................................
FD552979       <-- ..................................................
EY936034       <-- ..................................................
EV530977       <-- ..................................................
EY935246       <-- ..................................................
EY917818       <-- ACTTGGGATGATGATTTTCGCAGCGACCGGTTACGATGACCAGAACCCAA
FD548338       --> ..................................................
EY915285       --> ..................................................
EY921724       --> ACTTGGGATGATGATTT-CGCAGCGACCGGTTACGATGAC-AGA-CCCAA
EY940245       --> ..................................................
EV528271       --> ..................................................
FD556731       --> ..................................................
EY939279       --> ..................................................

               851    -    901
UN15754        --> ACGCATTGATAATGGAAGGTTTATTAGGATCACTATCCTCAGGGATTCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911161       <-- ..................................................
FD552979       <-- ..................................................
EY936034       <-- ..................................................
EV530977       <-- ..................................................
EY935246       <-- ..................................................
EY917818       <-- ACGCATTGATAATGGAAGGTTTATTAGGATCACTATCCTCAGGGATTCTA
FD548338       --> ..................................................
EY915285       --> ..................................................
EY921724       --> -CGCATTG..........................................
EY940245       --> ..................................................
EV528271       --> ..................................................
FD556731       --> ..................................................
EY939279       --> ..................................................

               901    -    951
UN15754        --> ATATACATGGCCTTAGTTGACCTAATTGCACTTGATTTCTTCCATAACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911161       <-- ..................................................
FD552979       <-- ..................................................
EY936034       <-- ..................................................
EV530977       <-- ..................................................
EY935246       <-- ..................................................
EY917818       <-- ATATACATGGCCTTAGTTGACCTAATTGCACTTGATTTCTTCCATAACAA
FD548338       --> ..................................................
EY915285       --> ..................................................
EY921724       --> ..................................................
EY940245       --> ..................................................
EV528271       --> ..................................................
FD556731       --> ..................................................
EY939279       --> ..................................................

               951    -   1001
UN15754        --> GATGTTGACAACGGCCGGTGAATCAGGTTCTAAGCTGAAGAAACTTTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911161       <-- ..................................................
FD552979       <-- ..................................................
EY936034       <-- ..................................................
EV530977       <-- ..................................................
EY935246       <-- ..................................................
EY917818       <-- GATGTTGACAACGGCCGGTGAATCAGGTTCTAAGCTGAAGAAACTTTGTT
FD548338       --> ..................................................
EY915285       --> ..................................................
EY921724       --> ..................................................
EY940245       --> ..................................................
EV528271       --> ..................................................
FD556731       --> ..................................................
EY939279       --> ..................................................

               1001   -   1051
UN15754        --> TTGTGGCATTGGTCTTGGGTTCTGCTTCTATGTCACTTCTTGCTCTCTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911161       <-- ..................................................
FD552979       <-- ..................................................
EY936034       <-- ..................................................
EV530977       <-- ..................................................
EY935246       <-- ..................................................
EY917818       <-- TTGTGGCATTGGTCTTGGGTTCTGCTTCTATGTCACTTCTTGCTCTCTGG
FD548338       --> ..................................................
EY915285       --> ..................................................
EY921724       --> ..................................................
EY940245       --> ..................................................
EV528271       --> ..................................................
FD556731       --> ..................................................
EY939279       --> ..................................................

               1051   -   1101
UN15754        --> GCTTAAAAGAGGCAAAACTATACAAAAGTTACCATAGCAAAAATGTTATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911161       <-- ..................................................
FD552979       <-- ..................................................
EY936034       <-- ..................................................
EV530977       <-- ..................................................
EY935246       <-- ..................................................
EY917818       <-- GCTTAAAAGAGGCAAAACTATACAAAAGTTACCATAGCAAAAATGTTATG
FD548338       --> ..................................................
EY915285       --> ..................................................
EY921724       --> ..................................................
EY940245       --> ..................................................
EV528271       --> ..................................................
FD556731       --> ..................................................
EY939279       --> ..................................................

               1101   -   1151
UN15754        --> TTTCTATATGAATATGGTTTTAACTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911161       <-- ...........................
FD552979       <-- ...........................
EY936034       <-- ...........................
EV530977       <-- ...........................
EY935246       <-- ...........................
EY917818       <-- TTTCTATATGAATATGGTTTTAACTTT
FD548338       --> ...........................
EY915285       --> ...........................
EY921724       --> ...........................
EY940245       --> ...........................
EV528271       --> ...........................
FD556731       --> ...........................
EY939279       --> ...........................