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Alignment for radish unigene UN15787

               1      -     51
UN15787        --> GGGAGAAGAAGCAAAAGAAA-AAAAAAAGTGTCTCCCTTTTTTTTTCTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727120       <-- ..................................................
EW727419       <-- ..................................................
EX766448       <-- ..................................................
EV547352       <-- ..................................................
EX763855       --> GGGAGAAGAAGCAAAAGAAA-AAAAAAAGTGTCTCCCTTTTTTTTTCTCG
FD548561       --> ...AGAAGAAGCAAAAGAAA-AAAAAA-GTGTCTCCCTTTTTTTTTCTCG
FD970783       --> ...AGAAGAAGCCAAAGAAAGAAAAAAAGTGTGGCCCTTTTTTT-CCTCG
EX762098       --> ..................................................
FY435186       --> ..................................................
FY435484       --> ..................................................
EW722557       --> ..................................................
FD981416       --> ..................................................
EW722468       --> ..................................................
EV552432       --> ..................................................

               51     -    101
UN15787        --> TAGGCGCTCAATTGAATGAGTTTCCGATCCACGATCTCGTCTGTGAGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727120       <-- ..................................................
EW727419       <-- ..................................................
EX766448       <-- ..................................................
EV547352       <-- ..................................................
EX763855       --> TAGGCGCTCAATTGAATGAGTTTCCGATCCACGATCTCGTCTGTGAGCTC
FD548561       --> TAGGCGCTCAATTGAATGAGTTTCCGATCCACGATCTCGTCTGTGAGCTC
FD970783       --> TAGGCGCTCAATTGAATGAGTTTCCGATCCACGATCTCGTCTGTGAGCTC
EX762098       --> .........AATTGAATGAGTTTCCGATCCACGATCTCGTCTGTGAGCTC
FY435186       --> .........AATTGAATGAGTTTCCGATCCACGATCTCGTCTGTGAGCTC
FY435484       --> .........AATTGAATGAGTTTCCGATCCACGATCTCGTCTGTGAGCTC
EW722557       --> ..............................agtATCTCGTCTGTGAGCTC
FD981416       --> ..................................................
EW722468       --> ..................................................
EV552432       --> ..................................................

               101    -    151
UN15787        --> GGAATCTCAACAAATCTGATTCCTTCGTCATGTCGTTCTCCTTCTTCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727120       <-- ..................................................
EW727419       <-- ..................................................
EX766448       <-- ..................................................
EV547352       <-- ..................................................
EX763855       --> GGAATCTCAACAAATCTGATTCCTTCGTCATGTCGTTCTCCTTCTTCAAG
FD548561       --> GGAATCTCAACAAATCTGATTCCTTCGTCATGTCGTTCTCCTTCTTCAAG
FD970783       --> AGAATCTCAACAAATCTGATTCCTTCGTCATGTCGTTCTCCTTCTTCAAG
EX762098       --> GGAATCTCAACAAATCTGATTCCTTCGTCATGTCGTTCTCCTTCTTCAAG
FY435186       --> GGAATCTCAACAAATCTGATTCCTTCGTCATGTCGTTCTCCTTCTTCAAG
FY435484       --> GGAATCTCAACAAATCTGATTCCTTCGTCATGTCGTTCTCCTTCTTCAAG
EW722557       --> GGAATCTCAACAAATCTGATTCCTTCGTCATGTCGTTCTCCTTCTTCAAG
FD981416       --> ............gATCTGATTCCTTCGTCATGTCGTTCTCCTTCTTCAAG
EW722468       --> ..................................................
EV552432       --> ..................................................

               151    -    201
UN15787        --> CCATCAAGGCCTAAGACGCCTCAAGAGGTCGTTAAGGCGATCAGAGACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727120       <-- ..................................................
EW727419       <-- ..................................................
EX766448       <-- ..................................................
EV547352       <-- ..................................................
EX763855       --> CCATCAAGGCCTAAGACGCCTCAAGAGGTCGTTAAGGCGATCAGAGACAG
FD548561       --> CCATCAAGGCCTAAGACGCCTCAAGAGGTCGTTAAGGCGATCAGAGACAG
FD970783       --> CCATCAAGGCCTAAGACGCCTCAAGAGGTCGTTAAGGCGATCAGAGACAG
EX762098       --> CCATCAAGGCCTAAGACGCCTCAAGAGGTCGTTAAGGCGATCAGAGACAG
FY435186       --> CCATCAAGGCCTAAGACGCCTCAAGAGGTCGTTAAGGCGATCAGAGACAG
FY435484       --> CCATCAAGGCCTAAGACGCCTCAAGAGGTCGTTAAGGCGATCAGAGACAG
EW722557       --> CCATCAAGGCCTAAGACGCCTCAAGAGGTCGTTAAGGCGATCAGAGACAG
FD981416       --> CCATCAAGGCCTAAGACGCCTCAAGAGGTCGTTAAGTCGATCAGAGACAG
EW722468       --> ..................................................
EV552432       --> ..................................................

               201    -    251
UN15787        --> CCTCTTGGCTCTCGACACCAAAACCGTCGTCGAAGTTAAAGCCCTCGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727120       <-- ..................................................
EW727419       <-- ..................................................
EX766448       <-- ..................................................
EV547352       <-- ..................................................
EX763855       --> CCTCTTGGCTCTCGACACCAAAACCGTCGTCGAAGTTAAAGCCCTCGAGA
FD548561       --> CCTCTTGGCTCTCGACACCAAAACCGTCGTCGAAGTTAAAGCCCTCGAGA
FD970783       --> CCTCTTGGCTCTCGACACCAAAACCGTCGTCGAAGTTAAAGCCCTCAAGA
EX762098       --> CCTCTTGGCTCTCGACGCCAAAACCGTCGTCGAAGTTAAAGCCCTCGAGA
FY435186       --> CCTCTTGGCTCTCGACACCAAAACCGTCGTCGAAGTTAAAGCCCTCGAGA
FY435484       --> CCTCTTGGCTCTCGACACCAAAACCGTCGTCGAAGTTAAAGCCCTCGAGA
EW722557       --> CCTCTTGGCTCTCGACACCAAAACCGTCGTCGAAGTTAAAGCCCTCGAGA
FD981416       --> CCTCTTGGCTCTCGACACCAAAACCGTCGTCGAAGTTAAAGCCCTCGAGA
EW722468       --> ..................................................
EV552432       --> ..................................................

               251    -    301
UN15787        --> AGGCTTTGGAAGAAGTAGAGAAGAATTTTTCATCTCTGAGAGGAATGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727120       <-- ..................................................
EW727419       <-- ..................................................
EX766448       <-- ..................................................
EV547352       <-- ..................................................
EX763855       --> AGGCTTTGGAAGAAGTAGAGAAGAATTTTTCATCTCTGAGAGGAATGCTT
FD548561       --> AGGCTTTGGAAGAAGTAGAGAAGAATTTTTCATCTCTGAGAGGAATGCTT
FD970783       --> AGGCATTGGAAGAAGTAGAGAAGAATTTTTCATCTCTGAGAGGAATGCTT
EX762098       --> AGGCTTTGGAAGAAGTAGAGAAGAATTTGTCATCTCTGAGAGGAATGCTT
FY435186       --> AGGCTTTGGAAGAAGTAGAGAAGAATTTTTCATCTCTGAGAGGAATGCTT
FY435484       --> AGGCTTTGGAAGAAGTAGAGAAGAATTTTTCATCTCTGAGAGGAATGCTT
EW722557       --> AGGCTTTGGAAGAAGTAGAGAAGAATTTGTCATCTCTGAGAGGAATGCTT
FD981416       --> AGGCTTTGGAAGAAGTAGAGAAGAATTTTTCATCTCTGAGAGGAATGCTT
EW722468       --> ..................................................
EV552432       --> ..................................................

               301    -    351
UN15787        --> TCAGGAGAGGGTGAGGCAGAGCCAAATGCTGAT-CAAGCTGTACAGTTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727120       <-- ..................................................
EW727419       <-- ..................................................
EX766448       <-- ..................................................
EV547352       <-- ..................................................
EX763855       --> TCAGGAGAGGGTGAGGCAGAGCCAAATGCTGAT-CAAGCTGTACAGTTAG
FD548561       --> TCAGGAGAGGGTGAGGCAGAGCCAAATGCTGAT-CAAGCTGTACAGTTAG
FD970783       --> TCAGGAGAGGGTGAGGCAGAGCCAAATGCTGAT-CAAGCTGTACAGTTAG
EX762098       --> TCAGGAGAGGGTGAGGCAGAGCCAAATGCTGAT-CAAGCTGTACAGTTAG
FY435186       --> TCAGGAGAGGGTGAGGCAGAGCCAAATGCTGAT-CAAGCTGTACAGTTAG
FY435484       --> TCAGGAGAGGGTGAGGCAGAGCCAAATGCTGAT-CAAGCTGTACAGTTAG
EW722557       --> TCAGGAGAGGGTGAGGCAGAGCCAAATGCTGATACAAGCTGTACAGTTAG
FD981416       --> TCAGGAGAGGGTGAGGCAGAGCCAAATGCTGAT-CAAGCTGTACAGTTAG
EW722468       --> ..................................................
EV552432       --> ..................................................

               351    -    401
UN15787        --> CATTAGAGTTTTGCAAAGAAGATGTTGTCTCTCTTGTTATCCATAAGCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727120       <-- ..................................................
EW727419       <-- ..................................................
EX766448       <-- ..................................................
EV547352       <-- ..................................................
EX763855       --> CATTAGAGTTTTGCAAAGAAGATGTCATCTCTCTTGTTATCCATAAGCTA
FD548561       --> CATTAGAGTTTTGCAAAGAAGATGTCATCTCTCTTGTTATCCATAAGCTA
FD970783       --> CATTAGAGTTTTGCAAAGAAGATGTTGTCTCTCTTGTTATCCATAAGCTA
EX762098       --> CATTAGAGTTTTGCAAAGAAGATGTTGTCTCTCTTGTTATCCATAAGCTA
FY435186       --> CATTAGAGTTTTGCAAAGAAGATGTTGTCTCTCTTGTTATCCATAAGCTA
FY435484       --> CATTAGAGTTTTGCAAAGAAGATGTTGTCTCTCTTGTTATCCATAAGCTA
EW722557       --> CATTAGAGCTTTGCAAAGAAGATGTTGTCTCTCTTGTTATCCATAAGCTA
FD981416       --> CATTAGAGTTTTGCAAAGAAGATGTCATCTCTCTTGTTATCCATAAGCTA
EW722468       --> ..................................................
EV552432       --> ..................................................

               401    -    451
UN15787        --> CACATTTTGGGATGGGAAACAAGAAAAGATTTACTGCATTGCTGGTCTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727120       <-- ..................................................
EW727419       <-- ..................................................
EX766448       <-- ..................................................
EV547352       <-- ..................................................
EX763855       --> CACCTTTTGGGATGGGAAACAAGAAAAGATTTACTGCATTGCTGGTCTAT
FD548561       --> CGCCTTTTGGGATGGGAAACAAGAAAAGATTTACTGCATTGCTGGTCTAT
FD970783       --> CACATTTTGGGATGGGAAACAAGAAAAGATTTACTGCATTGCTGGTCTAT
EX762098       --> CACATTTTGGGATGGGAAACAAGAAAAGATTTACTGCATTGCTGGTCTAT
FY435186       --> CACATTTTGGGATGGGAAACAAGAAAAGATTTACTGCATTGCTGGTCTAT
FY435484       --> CACATTTTGGGATGGGAAACAAGAAAAGATTTACTGCATTGCTGGTCTAT
EW722557       --> CACATTTTGGGATGGGAAACAAGAAAAGATTTACTGCATTGCTGGTCTAT
FD981416       --> CACCTTTTGGGATGGGAAACAAGAAAAGATTTACTGCATTGCTGGTCTAT
EW722468       --> ..................................................
EV552432       --> ..................................................

               451    -    501
UN15787        --> CTTGTTGAAGCAAAAAGTTGGGGAGGCTTATTG-TTTTGTGCAGTACTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727120       <-- ..................................................
EW727419       <-- ..................................................
EX766448       <-- ..................................................
EV547352       <-- ..................................................
EX763855       --> CTTGTTGAAGCAAAAAGTTGGGGAGGCTTATTG-TTTTGTGCAGTACTTT
FD548561       --> CTTGTTGAAGCAAAAAGTTGGGGAGGCTTATTG-TTTTGTGCAGTACTCT
FD970783       --> CCTGTTGAAGCAAAAAGTTGGGGAGGCTTATTG-CTTTGTGCATTACTTT
EX762098       --> CTTGTTGAAGCAAAAAGTTGGGGAGGCTTATTG-CTTTGTGCAATACTTT
FY435186       --> CTTGTT............................................
FY435484       --> CTTGTTGAAGCAAAAAGTTGGGGAGGCTTATTGct...............
EW722557       --> CTTGTTGAAGCAAAAAGTTGGGGAGGCTTATTGCTTTTGTGCAATACTTT
FD981416       --> CTTGTTGAAGCAAAAAGTTGGGGAGGCTTATTG-TTTTGTGCAGTACTTT
EW722468       --> ..................................................
EV552432       --> ..................................................

               501    -    551
UN15787        --> GAAGAACATTTT-GAGTTGCTTGACTCTTTGG-TTGTATGCTATGACAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727120       <-- ..................................................
EW727419       <-- ..................................................
EX766448       <-- ..................................................
EV547352       <-- ..................................................
EX763855       --> GAAGAACATTTT-GAGTTGCTTGACTCTTTGG-TTGTATGCTATGACAAC
FD548561       --> GAAGAACATTTT-GAGTTGCTTGACTCTTTGG-TTGTATGCTATGACAAC
FD970783       --> GAAGAACATTTT-GAGTTGCTTGACTCTTTGG-TTGTATGCTATGACAAC
EX762098       --> GAAGAACATTTT-GAGTTGCTTGACTGTTTGG-TTGTATGCTATGACAAC
FY435186       --> ..................................................
FY435484       --> ..................................................
EW722557       --> GAAGAACATTTTTGAGTTGCTTGACTGTTTGGGTTGTATGCTATGACAAC
FD981416       --> GAAGAACATTTT-GAGTTGCTTGACTCTTTGG-TTGTATGCTATGACAAC
EW722468       --> ..................................................
EV552432       --> ..................................................

               551    -    601
UN15787        --> AAGGAGATTGCGCTGCATTGTGG-AAG-TATGCTTAGGGAATGCATTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727120       <-- ...........tctaCATTGTGG-AAGGTATGCTTAGGGAATGCATTAAA
EW727419       <-- ..................................................
EX766448       <-- ..................................................
EV547352       <-- ..................................................
EX763855       --> AAGGAGATTGCGCTGCATTGTGG-AAG-TATGCTTAGGGAATGCATTAAA
FD548561       --> AAGGAGATTGCGCTGC..................................
FD970783       --> AAAGAGATTGCGCTGCATTGTGG-AAG-TATGCT................
EX762098       --> AAGGAGATTGCTCTGCATTGTGG-AAG-TATGCTTAGGGAATGCATTAAA
FY435186       --> ..................................................
FY435484       --> ..................................................
EW722557       --> AAGGAGATTGCTCTACATTGTGGGAGG-TATGCTTAGGGAATGCATTAAA
FD981416       --> AAGGAGATTGCGCTGCATTGTGG-AAG-TATGCTTAGGGAATGCATTAAA
EW722468       --> ..................................................
EV552432       --> ..................................................

               601    -    651
UN15787        --> TTCCCAAGTCTTGCTAAGTATATTCTAGAGTCTGCTTGCTTTGAGTTATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727120       <-- TTCCCAAGTCTTGCTAAGTATATTCTAGAGTCTGCTTGCTTTGAGTTATT
EW727419       <-- ...CCAAGTCTTGCTAAGTATATTCTAGAGTCTGCTTGCTTTGAGTTATT
EX766448       <-- ..................................................
EV547352       <-- ..................................................
EX763855       --> TTCCCAAGTCTTGCTAAGTATATTCTAGAGTCTGCGTGCTTTGAGTTATT
FD548561       --> ..................................................
FD970783       --> ..................................................
EX762098       --> TTCCCAAGTCTTGCTAAGTATATTCTAGAGTCTGCTTGCTTTGAGTTATT
FY435186       --> ..................................................
FY435484       --> ..................................................
EW722557       --> TTCCCAAGTCTTGCTAAGTATATTCTAGAGTCTGCTTGCTTTGAGTTATT
FD981416       --> TTCCCAAGTCTTGCTAAGTATATTCTAGAGTCTGCGTGCTTTGAGTTATT
EW722468       --> ..................................................
EV552432       --> ..................................................

               651    -    701
UN15787        --> CTTCAAATTTGTGGAATTGCCAAACTTTGATGTTGCTTCTGATGCATTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727120       <-- CTTCAAATTTGTGGAATTGCCAAACTTTGATGTTGCTTCTGATGCATTTT
EW727419       <-- CTTCAAATTTGTGGAATTGCCAAACTTTGATGTTGCTTCTGATGCATTTT
EX766448       <-- ..................................................
EV547352       <-- ..................................................
EX763855       --> CTTCAAATTTGTGGAATTGCCAAACTTTGATGTTGCTTCTGATGCATTTT
FD548561       --> ..................................................
FD970783       --> ..................................................
EX762098       --> CTTCAAATTTGTGGAATTGCCAAACTTTGATGTTGCTTCTGATGCATTTT
FY435186       --> ..................................................
FY435484       --> ..................................................
EW722557       --> CTTCAA-TTTGTGGAATTGCCAAACTTTGATGTTGCTTCTGATGCATTTT
FD981416       --> CTTCAAATTTGTGGAATTGCCAAACTTTGATGTTGCTTCTGATGCATTTT
EW722468       --> ........................CTTTGATGTTGCTTCTGATGCATTTT
EV552432       --> ..................................................

               701    -    751
UN15787        --> CAACATTCAAGGATCTTCTCACTAAACATGACACCGTCGTCTCTGAGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727120       <-- CAACATTCAAGGATCTTCTCACTAAACATGACACCGTCGTCTCTGAGTTT
EW727419       <-- CAACATTCAAGGATCTTCTCACTAAACATGACACCGTCGTCTCTGAGTTT
EX766448       <-- .AACATTCAAGGATCTTCTCACTAAACATGACACCGTCGTCTCTGAGTTT
EV547352       <-- ..................................................
EX763855       --> CAACATT...........................................
FD548561       --> ..................................................
FD970783       --> ..................................................
EX762098       --> CAACATTCAAGGATCTTCTCACTAAACATGACACCGTCGTCTCTGAGTTT
FY435186       --> ..................................................
FY435484       --> ..................................................
EW722557       --> CAACATTCAAGGATCTTCTCACTAAACATGACACCGTCGTCTCTGAGTTT
FD981416       --> CAACATTCAAGGATCTTCTCACTAAACATGACACCGTCGTCTCTGAGTTT
EW722468       --> CAACATTCAAGGATCTTCTCACTAAACATGACACCGTCGTCTCTGAGTTT
EV552432       --> ..................................................

               751    -    801
UN15787        --> CTCACCTCTCATTACCCTGAGTTCTTTGAAATATATGAAAGTCTTTTGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727120       <-- CTCACCTCTCATTACCCTGAGTTCTTTGAAATATATGAAAGGCTTTTGAC
EW727419       <-- CTCACCTCTCATTACCCTGAGTTCTTTGAAATATATGAAAGGCTTTTGAC
EX766448       <-- CTCACCTCTCATTACCCTGAGTTCTTTGAAATATACGAAAGTCTTTTGAC
EV547352       <-- ...................................gGAAAGTCTTTTGAC
EX763855       --> ..................................................
FD548561       --> ..................................................
FD970783       --> ..................................................
EX762098       --> CTCACCTCTCATTACCCTGAGTTCTT-GAAATAT................
FY435186       --> ..................................................
FY435484       --> ..................................................
EW722557       --> CTCACCTCTCATTACCCTGAGTTCTTTGAA-TATATGAAAG-CTTTTGAC
FD981416       --> CTCACCTCTCATTACCCTGAGTTCTTTGAAATATACGAAAGTCTTTTGAC
EW722468       --> CTCACCTCTCATTACCCTGAGTTCTTTGAAATATATG.............
EV552432       --> ...................................gGAAAGTCTTTTGAC

               801    -    851
UN15787        --> ATCATCAAACTATGTGACGAGAAGGCAATCATTGAAGCTTCTCTCGGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727120       <-- ATCATCTAATTATGTGACGAGAAGGCAATCGTTGAAGCTTCTCTCGGATT  Raphanus sativus cv Early Scarlet Globe
EW727419       <-- ATCATCTAATTATGTGACGAGAAGGCAATCGTTGAAGCTTCTCTCGGATT  Raphanus sativus cv Early Scarlet Globe
EX766448       <-- ATCATCAAACTATGTGACGAGAAGGCAATCATTGAAGCTTCTCTCGGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV547352       <-- ATCATCAAACTATGTGACGAGAAGGCAATCATTGAAGCTTCTCTCGGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX763855       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548561       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD970783       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762098       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY435186       --> ..................................................  Raphanus sativus cv GSK3-1
FY435484       --> ..................................................  Raphanus sativus cv GSK3-1
EW722557       --> ATCATC-TATTATGTGACGAG.............................  Raphanus sativus cv Early Scarlet Globe
FD981416       --> ATCATCAAACTATGTGACGAGAA...........................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW722468       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV552432       --> ATCATCAAACTATGTGACGAGAAGGCAATCATTGAAGCTTCTCTCGGATT  Raphanus raphanistrum subsp. raphanistrum (NY)

               851    -    901
UN15787        --> TCTTATTGGAGCCTCCAAACTCCCACATAATGAAGAAATTCATCTTAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727120       <-- TCTTATTGGAGCCTCCAAACTCCCACATAATGAAGAAGTTCATCTTAGAA
EW727419       <-- TCTTATTGGAGCCTCCAAACTCCCACATAATGAAGAAGTTCATCTTAGAA
EX766448       <-- TCTTATTGGAGCCTCCAAACTCCCACATAATGAAGAAATTCATCTTAGAA
EV547352       <-- TCTTATTGGAGCCTCCAAACTCCCACATAATGAAGAAATTCATCTTAGAA
EX763855       --> ..................................................
FD548561       --> ..................................................
FD970783       --> ..................................................
EX762098       --> ..................................................
FY435186       --> ..................................................
FY435484       --> ..................................................
EW722557       --> ..................................................
FD981416       --> ..................................................
EW722468       --> ..................................................
EV552432       --> TCTTATTGGAGCCTCCAAACTCCCACATAATGAAGAAATTCATCTTAGAA

               901    -    951
UN15787        --> GTTCGTTATATGAAAGTGATTATGACACTTCTCAAGGACTCGAGCAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727120       <-- GTTCGTTACATGAAAGTGATTATGACACTTCTCAAGGACTCGAGCAAGAA
EW727419       <-- GTTCGTTACATGAAAGTGATTATGACACTTCTCAAGGACTCGAGCAAGAA
EX766448       <-- GTTCGTTATATGAAAGTGATTATGACACTTCTCAAGGACTCGAGCAAGAA
EV547352       <-- GTTCGTTATATGAAAGTGATTATGACACTTCTCAAGGACTCGAGCAAGAA
EX763855       --> ..................................................
FD548561       --> ..................................................
FD970783       --> ..................................................
EX762098       --> ..................................................
FY435186       --> ..................................................
FY435484       --> ..................................................
EW722557       --> ..................................................
FD981416       --> ..................................................
EW722468       --> ..................................................
EV552432       --> GTTCGTTATATGAAAGTGATTATGACACTTCTCAAGGACTCGAGCAAGAA

               951    -   1001
UN15787        --> TATTCAAATCTCAGCCTTTCATATATTCAAGATCTTTGTTGCGAATCCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727120       <-- TATTCAAATCTCAGCCTTTCATATATTCAAGATCTTTGTTGCGAATCCTA
EW727419       <-- TATTCAAATTTCAGCCTTTCATATATTCAAGATCTTTGTTGCGAATCCTA
EX766448       <-- TATTCAAATCTCAGCCTTTCATATATTCAAGATCTTTGTTGCGAATCCTA
EV547352       <-- TATTCAAATCTCAGCCTTTCATATATTCAAGATCTTTGTTGCGAATCCTA
EX763855       --> ..................................................
FD548561       --> ..................................................
FD970783       --> ..................................................
EX762098       --> ..................................................
FY435186       --> ..................................................
FY435484       --> ..................................................
EW722557       --> ..................................................
FD981416       --> ..................................................
EW722468       --> ..................................................
EV552432       --> TATTCAAATCTCAGCCTTTCATATATTCAAGATCTTTGTTGCGAATCCTA

               1001   -   1051
UN15787        --> ATAAGCCACAAGAAGTGAAGATCATTTTGGCAAGAAACCACGAGAAGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727120       <-- ATAAGCCACAAGAAGTGAAGATCATTTTGGCAAGAAACCACGAGAAGTTG
EW727419       <-- ATAAGCCACAAGAAGTGAAGATCATTTTGGCAAGAAACCACGAGAAGTTG
EX766448       <-- ATAAGCCACAAGAAGTGAAGATCATTTTGGCAAGAAACCACGAGAAGTTG
EV547352       <-- ATAAGCCACAAGAAGTGAAGATCATTTTGGCAAGAAACCACGAGAAGTTG
EX763855       --> ..................................................
FD548561       --> ..................................................
FD970783       --> ..................................................
EX762098       --> ..................................................
FY435186       --> ..................................................
FY435484       --> ..................................................
EW722557       --> ..................................................
FD981416       --> ..................................................
EW722468       --> ..................................................
EV552432       --> ATAAGCCACAAGAAGTGAAGATCATTTTGGCAAGAAACCACGAGAAGTTG

               1051   -   1101
UN15787        --> CTTGAACTTCTTCACAACTTGTCCCCTGGTAAAGGTTCTGAAGATGATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727120       <-- CTTGAACTTCTTCACAACTTGTCCCCTGGTAAAGGTTCTGAAGATGATCA
EW727419       <-- CTTGAACTTCTTCACAACTTGTCCCCTGGTAAAGGTTCTGAAGATGATCA
EX766448       <-- CTTGAACTTCTTCACAACTTGTCCCCTGGTAAAGGTTCTGAAGATGATCA
EV547352       <-- CTTGAACTTCTTCACAACTTGTCCCCTGGTAAAGGTTCTGAAGATGATCA
EX763855       --> ..................................................
FD548561       --> ..................................................
FD970783       --> ..................................................
EX762098       --> ..................................................
FY435186       --> ..................................................
FY435484       --> ..................................................
EW722557       --> ..................................................
FD981416       --> ..................................................
EW722468       --> ..................................................
EV552432       --> CTTGAACTTCTTCACAACTTGTCCCCTGGTAAAGGTTCTGAAGATGATCA

               1101   -   1151
UN15787        --> ATTCGAGGAGGAAAAGGAGCTGATCATCGAGGAGATTCAGAAAATGTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727120       <-- ATTCGAGGAGGAAAAGGAGCTGATCATCGAGGAGATTCAAAAAATGTCTC
EW727419       <-- ATTCGAGGAGGAAAAGGAGCTGATCATCGAGGAGATTCAAAAAATGTCTC
EX766448       <-- ATTCGAGGAGGAAAAGGAGCTGATCATCGAGGAGATTCAGAAAATGTCTC
EV547352       <-- ATTCGAGGAGGAAAAGGAGCTGATCATCGAGGAGATTCAGAAAATGTCTC
EX763855       --> ..................................................
FD548561       --> ..................................................
FD970783       --> ..................................................
EX762098       --> ..................................................
FY435186       --> ..................................................
FY435484       --> ..................................................
EW722557       --> ..................................................
FD981416       --> ..................................................
EW722468       --> ..................................................
EV552432       --> ATTCGAGGAGGAAAAGGAGCTGATCATCGAGGAGATTCAGAAAATGTCTC

               1151   -   1201
UN15787        --> GCCTCAAAAACCTTGAACTTTGATACATTCTTTTGCCTCCTCCTATTATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727120       <-- GCCTCAAAAACCTTGAACTTTGATACATTCTTTTGCCTCCTCCTATTATC
EW727419       <-- GCCTCAAAAACCTTGAACTTTGATACATTCTTTTGCCTCCTCCTATTATC
EX766448       <-- GCCTCAAAAACCTTGAACTTTGATACATTCTTTTGCCTCCTCCTATTATC
EV547352       <-- GCCTCAAAAACCTTGAACTTTGATACATTCTTTTGCCTCCTCCTATTATC
EX763855       --> ..................................................
FD548561       --> ..................................................
FD970783       --> ..................................................
EX762098       --> ..................................................
FY435186       --> ..................................................
FY435484       --> ..................................................
EW722557       --> ..................................................
FD981416       --> ..................................................
EW722468       --> ..................................................
EV552432       --> GCCTCAAAAACCTTGAACTTTGATACATTCTTTTGCCTCCTCCTATTATC

               1201   -   1251
UN15787        --> TTCCTCCCCCCTTCCACGGTGATTCCCTGAGTCTTGTAAAACAGGTTACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727120       <-- TTCCCCCCCCCTTCCACGGTGATTCCCTGAGTCTTGTAAAACAGGTTACG
EW727419       <-- TTCCTCCCCCCTTCCACGGTGATTCCCTGAGTCTTGTAAAACAGGTTACG
EX766448       <-- TTCCTCCCCCCTTCCACGGTGATTCCCTGAGTCTTGTAAAACAGGTTACG
EV547352       <-- TTCCTCCCCCCTTCCACGGTGATTCCCTGAGTCTTGTAAAACAGGTTACG
EX763855       --> ..................................................
FD548561       --> ..................................................
FD970783       --> ..................................................
EX762098       --> ..................................................
FY435186       --> ..................................................
FY435484       --> ..................................................
EW722557       --> ..................................................
FD981416       --> ..................................................
EW722468       --> ..................................................
EV552432       --> TTCCTCCCCCCTTCCACGGTGATTCCCTGAGTCTTGTAAAACAGGTTACG

               1251   -   1301
UN15787        --> GGGTGATACTCTGTATCAGAAGTTTCAGAAACTGTGTATGAAACTGCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727120       <-- GGGTGATACTCTGTATCAGAAGTTTCAGAAACTGTGTATGAAACTGTTTG
EW727419       <-- GGGTGATACTCTGTATCAGAAGTTTCAGAAACTGTGTATGAAACTGTTTG
EX766448       <-- GGGTGATACTCTGTATCAGAAGTTTCAGAAACTGTGTATGAAACTGCTTG
EV547352       <-- GGGTGATACTCTGTATCAGAAGTTTCAGAAACTGTGTATGAAACTGCTTG
EX763855       --> ..................................................
FD548561       --> ..................................................
FD970783       --> ..................................................
EX762098       --> ..................................................
FY435186       --> ..................................................
FY435484       --> ..................................................
EW722557       --> ..................................................
FD981416       --> ..................................................
EW722468       --> ..................................................
EV552432       --> GGGTGATACTCTGTATCAGAAGTTTCAGAAACTGTGTATGAAACTGCTTG

               1301   -   1351
UN15787        --> TTTTCCTAGTACACATGTAGTAATGTAACTTTTGATTCTCTGTGACAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727120       <-- TTTTCCTAGTACACATGTAGTAATGTAACTTTTGATTCTCTGTGACAAAT
EW727419       <-- TTTTCCTAGTACACATGTAGTAATGTAACTTTTGATTCTCTGTGACAAAT
EX766448       <-- TTTTCCTAGTACACATGTAGTAATGTAACTTTTGATTCTCTGTGACAAAT
EV547352       <-- TTTTCCTAGTACACATGTAGTAATGTAACTTTTGATTCTCTGTGACAAAT
EX763855       --> ..................................................
FD548561       --> ..................................................
FD970783       --> ..................................................
EX762098       --> ..................................................
FY435186       --> ..................................................
FY435484       --> ..................................................
EW722557       --> ..................................................
FD981416       --> ..................................................
EW722468       --> ..................................................
EV552432       --> TTTTCCTAGTACACATGTAGTAATGTAACTTTTGATTCTCTGTGACAAAT

               1351   -   1401
UN15787        --> CGCTGAGCTGCTCTGATACAGACTTGACTCTTGTTAAAAGACCATAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727120       <-- CGCTGAGCTGCTCTGATACAGACTTGACTCTTGTTAAAAGACCATAAACA
EW727419       <-- CGCTGAGCTGCTTTGATACAGACTTGACTCTTGTTAAAAGA.........
EX766448       <-- CGCTGAGCTGCTCTGATACAGACTTGACTCTTGTTAAAAGACCATAAACA
EV547352       <-- CGCTGAGCTGCTTTGATACAGACTTGACTCTTGTTAAAAGACCATAAACA
EX763855       --> ..................................................
FD548561       --> ..................................................
FD970783       --> ..................................................
EX762098       --> ..................................................
FY435186       --> ..................................................
FY435484       --> ..................................................
EW722557       --> ..................................................
FD981416       --> ..................................................
EW722468       --> ..................................................
EV552432       --> CGCTGAGCTGCTCTGATACAGACTTGACTCTTGTTAAAAGACCATAAACA

               1401   -   1451
UN15787        --> CTTTGTTACCTTTAAATTTGGGTATGAATAATATTGTGCTTTTGTATGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727120       <-- C--TGTTACCTTT.....................................
EW727419       <-- ..................................................
EX766448       <-- CTTTGTTACCTTTAAATTTGGGTATGAATAATATTGTGCTTTTGT.....
EV547352       <-- CTTTGTTACCTTTAAATTTGGGTATGAATAATATTGTGCTTTTGTATGTA
EX763855       --> ..................................................
FD548561       --> ..................................................
FD970783       --> ..................................................
EX762098       --> ..................................................
FY435186       --> ..................................................
FY435484       --> ..................................................
EW722557       --> ..................................................
FD981416       --> ..................................................
EW722468       --> ..................................................
EV552432       --> CTTTGTTACCTTTAAATTTGGGTATGAATAATATTGTGCTTTTGTATGTA

               1451   -   1501
UN15787        --> ATATTTGAAATGAATCGAGTTCTTTCCGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW727120       <-- ..............................
EW727419       <-- ..............................
EX766448       <-- ..............................
EV547352       <-- ATATTTGAAATGAATCGAGTTCTTTCCGTG
EX763855       --> ..............................
FD548561       --> ..............................
FD970783       --> ..............................
EX762098       --> ..............................
FY435186       --> ..............................
FY435484       --> ..............................
EW722557       --> ..............................
FD981416       --> ..............................
EW722468       --> ..............................
EV552432       --> ATATTTGAAATGAATCGAGTTCTTTCCGTG