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Alignment for radish unigene UN15871

               1      -     51
UN15871        --> CCGTCTTCTATCAAACGATACCAAACAAGAGATTGCAAAATTGAATATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748570       <-- ........TATCAAACGATACCAAACAAGAGATTGCAAAATTGAATATTC
FD954603       <-- ..................................................
EY900763       <-- ..................................................
EX746423       <-- ..................................................
FD533853       <-- ..................................................
EX756891       <-- ..................................................
FD960952       --> CCGTCTTCTATCAAACGATACCAAACAAGAGATTGCAAAATTGAATATTC
FD983974       --> .............................gGATTGCAAAATAGAATATTC
EY896230       --> ..........................................GAATATTC
EY942069       --> ..........................................GAAGATTC
FD950825       --> ..........................................ggagATTC
EX750832       --> ................................................TC
EX760029       --> ..................................................
EX760608       --> .....................................gaaaattcaaatg
EX777779       --> ..................................................

               51     -    101
UN15871        --> AAATGGTTATAGGTTTAGAGAGAAAAAA-GAACC-AACACTAATCGTATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748570       <-- AAATGGTTATAGGTTTAGAGAGAAAAAA-GAACC-AAAACTAATCGTATC  Raphanus raphanistrum subsp. maritimus
FD954603       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY900763       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX746423       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD533853       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX756891       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960952       --> AAATGGTTATAGGTTTAGAGAGAAAAAA-GAACC-AACACTAATCGTATC  Raphanus raphanistrum subsp. maritimus
FD983974       --> AAATGGTTATAGGTTTAGAGAGAAAAAA-GAACC-AACACTAATCGTATC  Raphanus raphanistrum subsp. landra
EY896230       --> AAATGGTTATAGGTTTAGAGAGAAAAAA-GAACC-AACACTAATCGTATC  Raphanus raphanistrum subsp. maritimus
EY942069       --> AAATGGTTATAGGTTTAGAGAGAAAAA--GAACC-AACACTAATCGTATC  Raphanus sativus cv Rat-Tail Radish #3870
FD950825       --> AAATGGTTATAGGTTTAGAGAGAAAAA--GAACC-AACACTAATCGTATC  Raphanus sativus cv Rat-Tail Radish #3870
EX750832       --> AAATGGTTATAGGTTTAGAGAGAAAAAAAGAACC-AACACTAATCGTATC  Raphanus raphanistrum subsp. maritimus
EX760029       --> ...atatagTAGGTTTAGAGAGAAAAA--GAACCCAACACTAATCGTATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760608       --> gttatatagTAGGTTTAGAGAGAAAAA--GAACC-AACACTAATTGTATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX777779       --> ................AGAGAGAAAAAA-GAACC-AACACTAATCGTATC  Raphanus raphanistrum subsp. landra

               101    -    151
UN15871        --> CCTTCCACGTTCACCAACAATGGCATAAAC-AAA-AAGAAACAAAACGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748570       <-- CCTTCCACGTTCACCAACAATGGCATAAAC-AAA-AAGACACAAAACGAG  Raphanus raphanistrum subsp. maritimus
FD954603       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY900763       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX746423       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD533853       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX756891       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960952       --> CCTTCCACGTTCACCAACAATGGCATAAAC-AAA-AAGACACAAAACGAG  Raphanus raphanistrum subsp. maritimus
FD983974       --> CCTTCCACGTTCACCAACAATGGCATAAAC-AAA-AAAAAACAAAACGAG  Raphanus raphanistrum subsp. landra
EY896230       --> CCTTCCACGTTCACCAACAATGGCATAAAC-AAA-AAGACACAAAACGAG  Raphanus raphanistrum subsp. maritimus
EY942069       --> CCTTCCACGTTCACCAACAATGGCATAAACGAAA-AAAAAACAAAACGAG  Raphanus sativus cv Rat-Tail Radish #3870
FD950825       --> CCTTCCACGTTCACCAACAATGGCATAAACGAAA-AAAAAACAAAACGAG  Raphanus sativus cv Rat-Tail Radish #3870
EX750832       --> CCTTCCACGTTCACCAACAATGGCATAAAC-AAA-AAGACACAAAACGAG  Raphanus raphanistrum subsp. maritimus
EX760029       --> CCTTCCACGTTCACCAACAATGGCATAAAC-GAA-AA-AAACAAAACGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760608       --> CCTTCCACGTTCACCAACAATGGCATAAAC-AAACAAAAAACAAAACGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX777779       --> CCTTCCACGTTCACCAACAATGGCATAAAC-AAA-AA-AAACAAAACGAG  Raphanus raphanistrum subsp. landra

               151    -    201
UN15871        --> GAAAATCCACGTTCATTCACATAACATATTAAAAGATCTAACATAAAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748570       <-- GAAAATCCACGTTCATTCACATAACATATTAAAAGATCTAACATAAAGCT
FD954603       <-- ..................................................
EY900763       <-- ..................................................
EX746423       <-- ..................................................
FD533853       <-- ..................................................
EX756891       <-- ..................................................
FD960952       --> GAAAATCCACGTTCATTCACATAACATATTAAAAGATCTAACATAAAGCT
FD983974       --> GAAAATCCACGTTCATTCACATAACATATTAAAAGATCTAACATAAAGCT
EY896230       --> GAAAATCCACGTTCATTCACATAACATATTAAAAGATCTAACATAAAGCT
EY942069       --> GAAAATCCACGTTCATTCACATAACATATTAAAAGATCTAACATAAAGCT
FD950825       --> GAAAATCCACGTTCATTCACATAACATATTAAAAGATCTAACATAAAGCT
EX750832       --> GAAAATCCACGTTCATTCACATAACATATTAAAAGATCTAACATAAAGCT
EX760029       --> GAAAATCCACGTTCATTCACATAACATATTAAAAGATCTAACATAAAGCT
EX760608       --> GAAAATCCACGTTCATTCACATAACATATTAAAAGATCTAACATAAAGCT
EX777779       --> GAAAATCCACGTTCATTCACATAACATATTAAAAGATCTAACATAAAGCT

               201    -    251
UN15871        --> TCAACAAACACCATTTCACAACACCCTTTTT-CTTGCTATCTGACGAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748570       <-- TCAACAAACACCATTTCACAACACCCTTTTT-CTTGCTATCTGACGAACT
FD954603       <-- ..................................................
EY900763       <-- ..................................................
EX746423       <-- ..................................................
FD533853       <-- ..................................................
EX756891       <-- ..................................................
FD960952       --> TCAACAAACACCACTTCACAACACCCTTTTT-CTTGCTATCTGACGAACT
FD983974       --> TCAACAAACACCATTTCACAACACCCTTTTT-CTTGCTATCTGACGAACA
EY896230       --> TCAACAAACACCATTTCACAACACCCTTTTT-CTTGCTATCTGACGAACT
EY942069       --> TCAACAAACACCATTTCACAACACCCTTTTT-CTTGCTATCTGACGAACT
FD950825       --> TCAACAAACACCATTTCACAACACCCTTTTT-CTTGCTATCTGACGAACT
EX750832       --> TCAACAAACACCATTTCACAACACCCTTTTT-CTTGCTATCTGACGAACT
EX760029       --> TCAACAAACACCATTTCACGACACCCTTTTTTCTTGCTATCTGACGAACA
EX760608       --> TCAACAAACACCATTTCACAACACCCTTTTT-CTTGCTATCTGACGAACT
EX777779       --> TCAACAAACACCATTTCACAACACCCTTTTT-CTTGCTATCTGACGAACA

               251    -    301
UN15871        --> CCATCACCA---TTTTGTAAACCCTAATCTTTCTTCTTGTTCTTCAACGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748570       <-- CCATCACCA---TTTTGTAAACCCTAATCTTTCTTCTTGTTCTTCAACGG
FD954603       <-- ...........................TCTTTCTTCTTGTTCTTCAACGG
EY900763       <-- ..................................................
EX746423       <-- ..................................................
FD533853       <-- ..................................................
EX756891       <-- ..................................................
FD960952       --> CCATCACCA---TTTTGTAAACCCTAATCTTTCTTCTTGTTCTTCAACGG
FD983974       --> CAATCACCA---TTTTGTAAACCCTAATCTTTCTTCTTGTTCTTCAACGG
EY896230       --> CCATCACCA---TTTTGTAAACCCTAATCTTTCTTCTTGTTCTTCAACGG
EY942069       --> CCATCACCA---TTTTGTAAACCCTAATCTTTCTTCTTGTTCTTCAACGG
FD950825       --> CCATCACCA---TTTTGTAAACCCTAATCTTTCTTCTTGTTCTTCAACGG
EX750832       --> CCATCACCA---TTTTGTAAACCCTAATCTTTCTTCTTGTTCTTCAACGG
EX760029       --> CGATCACCA---TTTTGTAAACCCTAATCTTTCTTCTTGTTCTTCAACGG
EX760608       --> CCATCACCACCATTTTGTAAACCCTAATCTTTCTTCTTGTTCTTCAACGG
EX777779       --> CAATCACCA---TTTTGTAAACCCTAATCTTTCTTCTTGTTCTTCAACGG

               301    -    351
UN15871        --> GCCCATTGGGATCTTGCTCAACACCTTCTCGTCCAACACTGCATACTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748570       <-- GCCCATTGGGGTCTTGCTCAACACCTTCTCGTCCAACACTGCATACTGCT
FD954603       <-- GCCCATCGGGATCTTGCTCAACACCTTCTCGTCCAACACTGCATACTGCT
EY900763       <-- ..................................................
EX746423       <-- ..................................................
FD533853       <-- ..................................................
EX756891       <-- ..................................................
FD960952       --> GCCCATTGGGATCTTGCTCAACACCTTCTCGTCCAACACTGCATACTGCT
FD983974       --> GCCCATTGGGATCTTGCTCAACACCTTCTCGTCCAACACTGCATACTGCT
EY896230       --> GCCCATTGGGATCTTGCTCAACACCTTCTCGTCCATCACTGCATACTGCT
EY942069       --> GCCCATCGGGATCTTGCTCAACACCTTCTCGTCCAACACTGCATACTGCT
FD950825       --> GCCCATCGGGATCTTGCTCAACACCTTCTCGTCCAACACTGCATACTGCT
EX750832       --> GCCCATTGGGATCTTGCTCAACACCTTCTCGTCCAACACTGCATACTGCT
EX760029       --> GCCCATTGGGATCTTGCTCAACACCTTCTCGTCCAACACTGCATACTGCT
EX760608       --> GCCCATTGGGATCTTGCTCAACACCTTCTCGTCCAACACTGCATACTGCT
EX777779       --> GCCCATTGGGATCTTGCTCAACACCTTCTCGTCCAACACTGCATACTGCT

               351    -    401
UN15871        --> TCTTGATCTCGATCATTGCTTTCTCACCTAACGGGTCGACCTTGTCTTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748570       <-- TCTTGATCTCGATCATTGCTTTCTCACCTAACGGGTCGACCTTGTCTTCG
FD954603       <-- TCTTGATCTCGATCATTGCTTTCTCACCTAACGGGTCGACCTTGTCTTCG
EY900763       <-- ............................................TCTTCG
EX746423       <-- ..................................................
FD533853       <-- ..................................................
EX756891       <-- ..................................................
FD960952       --> TCTTGATCTCGATCATTGCTTTCTCACCTAACGGGTCGACCTTGTCTTCG
FD983974       --> TCTTGATCTCGATCATTGCTTTCTCACCTAATGGGTCGACCTTGTCTTCG
EY896230       --> TCTTGATCTCGATCATTGCTTTCTCACCTAACGGGTCGACCTTGTCTTCG
EY942069       --> TCTTGATCTCGATCATTGCTTTCTCACCTAACGGGTCGACCTTGTCTTCG
FD950825       --> TCTTGATCTCGATCATTGCTTTCTCACCTAACGGGTCGACCTTGTCTTCG
EX750832       --> TCTTGATCTCGATCATTGCTTTCTCACCTAACGGGTCGACCTTGTCTTCG
EX760029       --> TCTTGATCTCGATCATTGCTTTCTCACCTAACGGGTCGACCTTGTCTTCG
EX760608       --> TCTTGATCTCGATCATTGCCTTCTCACCTAACGGGTCGACCTTGTCTTCG
EX777779       --> TCTTGATCTCGATCATTGCTTTCTCACCTAATGGGTCGACCTTGTCTTCG

               401    -    451
UN15871        --> TACTTGTCGTACACAAGAGGAACCGTGAAGAGTAGCACAAGAGCTATGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748570       <-- TACTTGTCGTACACAAGAGGAACCGTGAAGAGTAGCACAAGAGCTATGTA  Raphanus raphanistrum subsp. maritimus
FD954603       <-- TACTTGTCGTAAACAAGAGGAACCGTGAAGAGTAGCACAAGAGCTATGTA  Raphanus sativus cv Rat-Tail Radish #3870
EY900763       <-- TACTTGTCGTACACAAGAGGAACCGTGAAGAGTAGCACAAGAGCTATGTA  Raphanus raphanistrum subsp. maritimus
EX746423       <-- ...........................AAGAGTAGCACAAGAGCTATGTA  Raphanus raphanistrum subsp. maritimus
FD533853       <-- ...........................AAGAGTAGCACAAGAGCTATGTA  Raphanus raphanistrum subsp. maritimus
EX756891       <-- ..............................agcAGCACAAGAGCTATGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960952       --> TACTTGTCGTACACAAGAGGAACCGTGAAGAGTAGCACAAGAGCTATGTA  Raphanus raphanistrum subsp. maritimus
FD983974       --> TACTTGTCGTATACAAGAGGAACCGTGAAGAGAAGCACAAGAGCTATGTA  Raphanus raphanistrum subsp. landra
EY896230       --> TACTTGTCGTACACAAGAGGAACCGTGAAGAGTAGCACAAGAGCTATGTA  Raphanus raphanistrum subsp. maritimus
EY942069       --> TACTTGTCGTAAACAAGAGGAACCGTGAAGAGTAGCACAAGAGCTATGTA  Raphanus sativus cv Rat-Tail Radish #3870
FD950825       --> TACTTGTCGTAAACAAGAGGAACCGTGAAGAGTAGCACAAGAGCTATGTA  Raphanus sativus cv Rat-Tail Radish #3870
EX750832       --> TACTTGTCGTACACAAGAGGAACCGTGAAGAGTAGCACAAGAGCTATGTA  Raphanus raphanistrum subsp. maritimus
EX760029       --> TACTTGTCGTATACAAGAGGAACCGTGAAGAGTAGCACAAGAGCTATGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760608       --> TACTTGTCGTATACAAGAGGAACCGTGAAAAGCAGCACAAGAGCTATGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX777779       --> TACTTGTCGTATACAAGAGGGACCGTGAAGAGAAGCACAAGAGCTATGTA  Raphanus raphanistrum subsp. landra

               451    -    501
UN15871        --> TGCCAATGTCAAGAAATTGAACCAGCCGCCCATGATGGATAGAACCCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748570       <-- TGCCAATGTCAAGAAATTGAACCAGCCGCCCATGATGGATAGAACC....
FD954603       <-- TGCCAATGTCAAGAAATTGAACCAGCCGCCCATGATGGATAGAACCCACA
EY900763       <-- TGCCAATGTCAAGAAATTGAACCAGCCGCCCATGATGGATAGAACCCACA
EX746423       <-- TGCCAATGTCAGGAAATTGAACCAGCCGCCCATGATGGATAGAACCCGCA
FD533853       <-- TGCCAATGTCAGGAAATTGAACCAGCCGCCCATGATGGATAGAACCCGCA
EX756891       <-- TGCCAATGTCAAGAAATTGAACCAGCCGCCCATGATGGATAGAACCCACA
FD960952       --> TGCCAATGTCAAGAAATTGAACCAGCCGCCCATGATGGATAGAACCCACA
FD983974       --> TGCCAATGTCAAGAAATTGAACCAGCCGCCCATGATGGATAGAACCCACA
EY896230       --> TGCCAATGTCAAGAAATTGAACCAGCCGCCCATGATGGATAGAACCCACA
EY942069       --> TGCCAATGTCAAGAAATTGAACCAGCCGCCCATGATGGATAGAACCCACA
FD950825       --> TGCCAATGTCAAGAAATTGAACCAGCCGCCCATGATGGATAGAACCCACA
EX750832       --> TGCCAATGTCAGGAAATTGAACCAGCCGCCCATGATGGATAGAACCCGCA
EX760029       --> TGCCAATGTCAAGAAATTGAACCAGCCGCCCATGATTGATAGAACCCACA
EX760608       --> TGCCAATGTCAAGAAATTGAACCAGCCGCCCATGATGGATAGAACCCACA
EX777779       --> TGCCAATGTCAAGAAATTGAACCAGCCGCCCATGATGGATAGAACCCACA

               501    -    551
UN15871        --> AGCCGGCTATAGCACAGAGGAATTTCTTGAGATCCCGGCC-AGAAGCAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748570       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD954603       <-- AGCCGGCTATAGCACAGAGGAATTTCTTGAGATCCCTGTC-AGAAGCAAT  Raphanus sativus cv Rat-Tail Radish #3870
EY900763       <-- AGCCGGCTATAGCACAGAGGAATTTCTTGAGATCCCGGCC-AGAAGCAAT  Raphanus raphanistrum subsp. maritimus
EX746423       <-- AGCCGGCTATAGCACAGAGGAATTTCTTGAGATCCCGGCC-AGAAGCAAT  Raphanus raphanistrum subsp. maritimus
FD533853       <-- AGCCGGCTATAGCACAGAGGAATTTCTTGAGATCCCGGCCCAGAAGCAAT  Raphanus raphanistrum subsp. maritimus
EX756891       <-- AGCCGGCTATAGCACAGAGGAATTTCTTGAGATCCCTGCC-AGAAGCAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960952       --> AGCCGGCTATAGCACAGAGGAATTTCTTGAGATCCCGGCC-AGAAGCAAT  Raphanus raphanistrum subsp. maritimus
FD983974       --> AGCCGGCTATAGCACAGAGGAATTTCTTGAGATCCCGGCC-AGAAGAAAT  Raphanus raphanistrum subsp. landra
EY896230       --> AGCCGGCTATAGCACAGAGGAATTTCTTGAGATCCCGGCC-AGAAGCAAT  Raphanus raphanistrum subsp. maritimus
EY942069       --> AGCCGGCTATAGCACAGAGGAATTTCTTGAGATCCCTGCC-AGAAGCAAT  Raphanus sativus cv Rat-Tail Radish #3870
FD950825       --> AGCCGGCTATAGCACAGAGGAATTTCTTGAGATCCCTGTC-AGAAGCAAT  Raphanus sativus cv Rat-Tail Radish #3870
EX750832       --> AGCCGGCTATAGCACAGAGGAATTTCTTGAGATCCCGGCC-AGAAGCAAT  Raphanus raphanistrum subsp. maritimus
EX760029       --> AGCCGGCTATAGCACAGAGGAATTTCTTGAGATCCCTGCC-AGAAGCGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760608       --> AGCCGGCTATAGCACA..................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX777779       --> AGCCGGCTATAGCACAGAGGAATTTCTTGAGATCCCGGCC-AGAAGCAAT  Raphanus raphanistrum subsp. landra

               551    -    601
UN15871        --> CTCACGAAGAGAGGAGAGTCCACGGTTGATCTCGATTCTGAGCCCAGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748570       <-- ..................................................
FD954603       <-- CTCACGAAGAGAGGAGAGTCCACGGTTGATCTCGATTCTGAGCCCAGATG
EY900763       <-- CTCACGAAGAGAGGAGAGTCCACGGTTGATCTCGATTCTGAGCCCAGATG
EX746423       <-- CTCACGAAGAGAGGAGAGTCCACGGTTGATCTCGATTCTGAGCCCAGATG
FD533853       <-- CTCACGAAGAGAGGAGAGTCCACGGTTGATCTCGATTCTGAGCCCAGATG
EX756891       <-- CTCACGAAGAGAGGAGAGTCCACGGTTGATCTCGATTCTGAGCCCAGATG
FD960952       --> CTCACGAAGAGAGG....................................
FD983974       --> CTCACGAAGAGAGGAGAGTCCACGGTTGATCTCGATTCTGAGCCCAGATG
EY896230       --> CTCACGAAGAGAGGAGAGTCCACGGTTGATCTCGATTCTGAGCCCAGATG
EY942069       --> CTCACGAAGAGAGGAGAGTCCACGGTTGATCTCGATTCTGAGCCCAGATG
FD950825       --> CTCACGAAGAGAGGAGAGTCCACGGTTGATCTCGATTCTGAGCCCAGATG
EX750832       --> CTCACGAAGAGAGGAGAGTCCACGGTTGATCTCGATTCTGAGCCCAGATG
EX760029       --> CTCACGAAGAGAGGAGAGTCCACGGTTGATCTCGATTCTAAGCCCAGATG
EX760608       --> ..................................................
EX777779       --> CTCACGAAGAGAGGAGAGTCCACGGTTGATCTCGATTCTGAGCCCAGATG

               601    -    651
UN15871        --> CGAGCTGAAGGATAGGCTCCTCAGGGATATGAACTTCAGGTATCTTTGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748570       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD954603       <-- CAAGCTGAAGGATAGGCTCTTCAGGGATATGAACTTCAGGAATCTTTGGC  Raphanus sativus cv Rat-Tail Radish #3870
EY900763       <-- CGAGCTGAAGGATAGGCTCCTCAGGGATATGAACTTCAGGTATCTTTGGC  Raphanus raphanistrum subsp. maritimus
EX746423       <-- CGAGCTGAAGGATAGGCTCCTCAGGGATATGAACTTCAGGTATCTTTGGC  Raphanus raphanistrum subsp. maritimus
FD533853       <-- CGAGCTGAAGGATAGGCTCCTCAGGGATATGAACTTCAGGTATCTTTGGC  Raphanus raphanistrum subsp. maritimus
EX756891       <-- CGAGCTGAAGGATAGGCTCCTCAGGGATGTGAACTTCAGGAATCTTTGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD960952       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD983974       --> CGAGCTGAAGGATAGGCTCCTCAGGGATATGAACTTCAGGTATCTTTGGT  Raphanus raphanistrum subsp. landra
EY896230       --> CGAGCTGAAGGATAGGCTCCTCAGGGATATGAACTTCAGGTATCTTTGGC  Raphanus raphanistrum subsp. maritimus
EY942069       --> CAAGCTGAAGGATAGGCTCTTCAGGGATATGAACTTCAGGAATCTTTGGC  Raphanus sativus cv Rat-Tail Radish #3870
FD950825       --> CAAGCTGAAGGATAGGCTCTTCAGGGATATGAACTTCAGGAATCTTTGGC  Raphanus sativus cv Rat-Tail Radish #3870
EX750832       --> CGAGCTGAAGGATAGGCTCCTCAGGGATATGAACTTCAGGTATCTTTGGC  Raphanus raphanistrum subsp. maritimus
EX760029       --> CAAGCTGAAGGATAGGCTCCTCAGGGATGTGAACTTCAGGAATCTTTGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760608       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX777779       --> CGAGCTGAAGGATAGGCTCCTCAGGGATATGAACTTCAGGTATCTTTGGC  Raphanus raphanistrum subsp. landra

               651    -    701
UN15871        --> GGCGACTTGTTGATGAACATGGTTGCATTAGACCAAAGAAACAACACAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748570       <-- ..................................................
FD954603       <-- GGCGACTTGTTGATGAACGTGGTTGCATTAGACCAAAGAAACAACACAGC
EY900763       <-- GGCGACTTGTTGATGAACATGGTTGCATTAGACCAAAGAAACAACACAGC
EX746423       <-- GGCGACTTGTTGATGAACATGGTTGCATTAGACCAAAGAAACAACACAGC
FD533853       <-- GGCGACTTGTTGATGAACATGGTTGCATTAGACCAAAGAAACAACACAGC
EX756891       <-- GGCGACTTGTTGATGAACACGGTGGCATTAGACCAAAGAAACAACACAGC
FD960952       --> ..................................................
FD983974       --> GGCGACTTGTTGATGAACATGGTTGCATTAGACCAAAGAAACAACACGGC
EY896230       --> GGCGACTTGTTGATGAACATGGTT..........................
EY942069       --> GGCGACTTGTTGATGAACGTGGTTGCATTAGACCAAAGAAACAACACAGC
FD950825       --> GGCGACTTGTTGATGAACGTGGTTGCATTAGACCAAAGAAACAACACAGC
EX750832       --> GGCGACTTGTTGATGAACATGGTTGCATTAGACCAAAGAAACAACACAGC
EX760029       --> GGCGACTTGTTGATGAACACGGTGGCATTAGACCAAAGAAACAACACAGC
EX760608       --> ..................................................
EX777779       --> GGCGACTTGTTGATGAACATGGTTGCATTAGACCAAAGAAACAACACGGC

               701    -    751
UN15871        --> AAGCACAACAATCATCACGTGGCAAAGCAAAGTGAGAAGATGGTACTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748570       <-- ..................................................
FD954603       <-- GAGCACAACAATCATGACGTGGCAAAGCAAAGTGAGAAGATGGTACTCCA
EY900763       <-- AAGCACAACAATCATCACGTGGCAAAGCAAAGTGAGAAGATGGTACTCCA
EX746423       <-- AAGCACAACAATCATCACGTGGCAAAGCAAAGTGAGAAGATGGTACTCCA
FD533853       <-- AAGCACAACAATCATCACGTGGCAAAGCAAAGTGAGAAGATGGTACTCCA
EX756891       <-- AAGCACAACAATCATCACGTGGCAAAGCAAAGTGAGAAGATGGTACTCCA
FD960952       --> ..................................................
FD983974       --> AAGCACAACAATCATCACGTGGCAAAGCAAAGTGAGAAGATGGTACTCCA
EY896230       --> ..................................................
EY942069       --> GAGAACAACGATCATGACGTGGCAAAGCAAAGTGAGAAGATGGTACTCCA
FD950825       --> GAGCACAACAATCATGACGTGGCAAAGCAAAGTGAGAAGATGGTACTCCA
EX750832       --> AAGCACAACAATCATCACGTGGCAAAGCAAAGTGAGAAGATGGTACTCCA
EX760029       --> AAGCACAACAATCATCACGTGGCAAAGCAAAGTGAGAAGATGGTACTCCA
EX760608       --> ..................................................
EX777779       --> AAGCACAACAATCATCACGTGGCAAAGCAAAGTGAGAAGATGGTACTCCA

               751    -    801
UN15871        --> TCAACTCAAACAGAACCCACGCGGCTGTAGCACCACCAAGCACACCACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748570       <-- ..................................................
FD954603       <-- TCAACTCAAACAGAACCCACGCGGCTGTAGCACCACCAAGCACACCACCT
EY900763       <-- TCAACTCAAACAGAACCCACGCGGCTGTAGCACCACCAAGCACACCACCA
EX746423       <-- TCAACTCAAACAGAACCCACGCGGCTGTAGCACCACCAAGCACACCACCA
FD533853       <-- TCAACTCAAACAGAACCCACGCGGCTGTAGCACCACCAAGCACACCACCA
EX756891       <-- TCAACTCAAACAGAACCCACGCGGCTGTAGCACCACCAAGCACACCACCA
FD960952       --> ..................................................
FD983974       --> TCAACTCAAACAGAACCCACGCGGCTGTA.....................
EY896230       --> ..................................................
EY942069       --> TCAACTCAAACAGAACCCACGCGGCTGTAGCACCACCAAGCACACCACCT
FD950825       --> TCAACTCAAACAGAACCCACGCGGCTGTAGCACCACCAAGCACACCACCT
EX750832       --> TCAACTCAAACAGAACCCACGCGGCTGTAGCACCACCAAGCACACCACCA
EX760029       --> TCAACTCAAACAGAACCCACGCCGCTGTAGCACCACCAAGCACACCACCA
EX760608       --> ..................................................
EX777779       --> TCAACTCAAACAGAACCCACGCGGCTGTAGCACCACCAA...........

               801    -    851
UN15871        --> GACATCTTCTTGTCCTTCCACATGAATATATCCGCCGGCTTTCCACCGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748570       <-- ..................................................
FD954603       <-- GACATCTTCTTGTCCTTCCACATGAATATATCCGCCGGCTTTCCACCGCC
EY900763       <-- GACATCTTCTTGTCCTTCCACATGAATATATCCGCCGGATTTCCACCGCC
EX746423       <-- GACATCTTCTTGTCCTTCCACATGAATATATCCGCCGGCTTTCCACCGCC
FD533853       <-- GACATCTTCTTGTCCTTCCACATGAATATATCCGCCGGCTTTCCACCGCC
EX756891       <-- GACATCTTCTTATCCTTCCACATGAATATATCCGCCGGCTTTCCACCGCC
FD960952       --> ..................................................
FD983974       --> ..................................................
EY896230       --> ..................................................
EY942069       --> GACATCTTCTTGTCCTTCCACATGAATATATC..................
FD950825       --> GACATCTTCTTGTCC...................................
EX750832       --> GACATCTTCTTGTCCT..................................
EX760029       --> GACATCTTCTTATCCTTCCACATGAATATATCCGCCGG............
EX760608       --> ..................................................
EX777779       --> ..................................................

               851    -    901
UN15871        --> GAGAACCTTATGCACAGGCTTCTCCCTTCCGAACAAGCGGTAAACTTTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748570       <-- ..................................................
FD954603       <-- GAGAACCTTATGAACGGGCTTCTCCCTTCCGAACAAGCGGTAGACTTTCG
EY900763       <-- GAGAACCTTATGCACAGGCTTCTCCCTTCCGAACAAGCGGTAAACTTTCG
EX746423       <-- GAGAACCTTATGCACAGGCTTCTCCCTTCCGAACAAGCGGTAAACTTTCG
FD533853       <-- GAGAACCTTATGCACAGGCTTCTCCCTTCCGAACAAGCGGTAAACTTTCG
EX756891       <-- GAGAACCTTATGAACGGGCTTCTCCCTTCCGAACAAGCGGTAGACTTTCG
FD960952       --> ..................................................
FD983974       --> ..................................................
EY896230       --> ..................................................
EY942069       --> ..................................................
FD950825       --> ..................................................
EX750832       --> ..................................................
EX760029       --> ..................................................
EX760608       --> ..................................................
EX777779       --> ..................................................

               901    -    951
UN15871        --> ATTTCACAGAAGACGGAGACTCCGGCTTCTTCTCCTTCTTCTTCTTCTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748570       <-- ..................................................
FD954603       <-- ATTTCATAGAAGACGGAGACTACGGCTTCTTCacc...............
EY900763       <-- ATTTCACAGAAGACGGAGACTCCGGCTTCTTCTCCTTCTTCTTCTTCTTA
EX746423       <-- ATTTCACAGAAGACGGAGACTCCGGCTTCTTCTCCTTCTTCTTCTTCTTA
FD533853       <-- ATTTCACAGAAGACGGAGACTCCGGCTTCTTCTCCTTCTTCTTCTTCTTA
EX756891       <-- ATTTCATAGAAGTCGGAGACTCCGGATTCTTCTCCTTCTTCTTCTTCTTA
FD960952       --> ..................................................
FD983974       --> ..................................................
EY896230       --> ..................................................
EY942069       --> ..................................................
FD950825       --> ..................................................
EX750832       --> ..................................................
EX760029       --> ..................................................
EX760608       --> ..................................................
EX777779       --> ..................................................

               951    -   1001
UN15871        --> TCGTCCTCGTCGTCGGAGGATGAAGACGACGAAGAGGAATCGCCACCGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748570       <-- ..................................................
FD954603       <-- ..................................................
EY900763       <-- TCGTCCTCc.........................................
EX746423       <-- TCGTCCTCGTCGTCGGAGGATGAAGACGACGAAGAGGAATCGCCACCGTG
FD533853       <-- TCGTCCTCGTCGTCGGAGGATGAAGACGACGAAGAGGAATCGCCACCGTG
EX756891       <-- TCGTCCTCGTCGTCGGAGGATGAAGACGACGAAGAGGAATCGCCACCGTG
FD960952       --> ..................................................
FD983974       --> ..................................................
EY896230       --> ..................................................
EY942069       --> ..................................................
FD950825       --> ..................................................
EX750832       --> ..................................................
EX760029       --> ..................................................
EX760608       --> ..................................................
EX777779       --> ..................................................

               1001   -   1051
UN15871        --> GTGGATCTTCTCCGTTATCTTATCCATCAACGAGTCCCTCTCCACGATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748570       <-- ..................................................
FD954603       <-- ..................................................
EY900763       <-- ..................................................
EX746423       <-- GTGGATCTTCTCCGTTATCTTATCCATCAACGAGTCCCTCTCCACGATCT
FD533853       <-- GTGGATCTTCTCCGTTATCTTATCCATCAACGAGTCCCTCTCCACGATCT
EX756891       <-- GTGGATCTTCTCCGTTATCTTATCCATCAACGATTCCCTCTCCACGATCT
FD960952       --> ..................................................
FD983974       --> ..................................................
EY896230       --> ..................................................
EY942069       --> ..................................................
FD950825       --> ..................................................
EX750832       --> ..................................................
EX760029       --> ..................................................
EX760608       --> ..................................................
EX777779       --> ..................................................

               1051   -   1101
UN15871        --> CCACAGCTGGCTCCGGCGCCGTCACAGATTCGTCGTGTTTGTGTTCCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748570       <-- ..................................................
FD954603       <-- ..................................................
EY900763       <-- ..................................................
EX746423       <-- CCACAGCTGGCTCCGGCGCCGTCACAGATTCGTCGTGTTTGTGTTCCTCA
FD533853       <-- CCACAGCTGGCTCCGGCGCCGTCACAGATTCGTCGTGTTTGTGTTCCTCA
EX756891       <-- CCACAGCTGGCTCCGGAGCCGTCACAGATTCATCGTGTTTGTGTTCCTCA
FD960952       --> ..................................................
FD983974       --> ..................................................
EY896230       --> ..................................................
EY942069       --> ..................................................
FD950825       --> ..................................................
EX750832       --> ..................................................
EX760029       --> ..................................................
EX760608       --> ..................................................
EX777779       --> ..................................................

               1101   -   1151
UN15871        --> GCCATCTCTTCTCTTCCCCGATTCG...........
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX748570       <-- ....................................
FD954603       <-- ....................................
EY900763       <-- ....................................
EX746423       <-- GCCATCTCTTCTCTTCCCCGATTCGttcgatttccc
FD533853       <-- GCCATCTCTTCTCTTCCCCGATTCGttcgatttccc
EX756891       <-- GCCATCTCTTCTtcgattccc...............
FD960952       --> ....................................
FD983974       --> ....................................
EY896230       --> ....................................
EY942069       --> ....................................
FD950825       --> ....................................
EX750832       --> ....................................
EX760029       --> ....................................
EX760608       --> ....................................
EX777779       --> ....................................