RadishBase

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Alignment for radish unigene UN15920

               1      -     51
UN15920        --> GGAAGCCTCACAAAACATTTTGATTTACTTTTCTCAATTGTCACTGTAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714616       <-- ...AGCCTCACAAAACATTTTGATTTACTTTTCTCAATTGTCACTGTAAT
EX771777       <-- .............................TTTTTCAATTGTCACTGTAAT
FD978297       <-- ..................................................
EV550574       <-- ..................................................
EV567485       <-- ..................................................
FD557471       <-- ..................................................
EX747913       <-- ..................................................
FD979687       <-- ..................................................
EV547986       <-- ..................................................
FD561404       <-- ..................................................
FD978380       <-- ..................................................
EX772097       <-- ..................................................
FD559584       <-- ..................................................
FD987160       <-- ..................................................
EX773599       <-- ..................................................
EY932405       <-- ..................................................
FD990085       <-- ..................................................
EX772517       <-- ..................................................
FD982109       <-- ..................................................
FD965560       <-- ..................................................
EV572418       --> GGAAGCCTCACAAAACATTTTGATTTACTTTTCTCAATTGTCACTGTAAT
FD553569       --> GGAAGCCTCACAAAACATTTTGATTTACTTTTCTCAATTGTCACTGTAAT
FD975690       --> GGAAGCCTAACAAAACATTTTGATTTACTTTTCTCAATTGTCACTGTAAT
EX776444       --> ...AGCCTCACAAAACATTTTGATTTACTTTTCTCAATTGTCACTGTAAT
FD974571       --> ...AGCCTCACAAAACATTTTGATTTACTTTTCTCAATTGTCACTGTAAT
EV543752       --> ...gGCCTCACAAAACATTTTGATTTACTTTTCTCAATTGTCACTGTAAT
EV545847       --> ...gGCCTCACAAAACATTTTGATTTACTTT-CTCAATTGTCACTGTAAT
EX751992       --> ...cGCCTCACAAAACATTTTGATTTACTTTTCTCAATTGTCACTGTAAT
FD565579       --> ....GCCTCACAAAACATCTTGATTTACTTTTCTCAATTGTCACTGTAAT
FD974636       --> ...gGCCTCACAAAACATTTTGATTTACTTTTCTCAATTGTCACTGTAAT
EX776129       --> ..................................................
FD555263       --> ..................................................
FD977736       --> ..................................................

               51     -    101
UN15920        --> ATTACATGACGAGTAACAAAATCCCATAAGACAAAGCAAACAAACAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714616       <-- ATTACATGACGAGTAACAAAATCCCATAAGACAAAACAAACAAACAAACA  Raphanus sativus var. oleiformis
EX771777       <-- ATTACATGACGAGTAACAAAATCCCATAAGACAAAGCAAACAAACAAACA  Raphanus raphanistrum subsp. landra
FD978297       <-- .........................caAAGACAAAGCAAACAA-CAAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550574       <-- .............................................AAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV567485       <-- ..............................................AACA  Raphanus raphanistrum subsp. landra
FD557471       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX747913       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD979687       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV547986       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD561404       <-- ..................................................  Raphanus sativus var. oleiformis
FD978380       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772097       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD559584       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD987160       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX773599       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY932405       <-- ..................................................  Raphanus sativus var. oleiformis
FD990085       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX772517       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD982109       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD965560       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV572418       --> ATTACATGACGAGTAACAAAATCCCATAAGACAAAGCAAACAAACAAACA  Raphanus raphanistrum subsp. landra
FD553569       --> ATTACATGACGAGTAACAAAATCCCATAAGACAAAGCAAACAAACAAACA  Raphanus raphanistrum subsp. landra
FD975690       --> ATTACATGACGAGTAAAAAAATCCCAAAAGACAAAGCAAACAAACAAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776444       --> ATTACATGACGAGTAACAAAATCCCATAAGACAAAGCAAACAAACAAACA  Raphanus raphanistrum subsp. landra
FD974571       --> ATTACATGACGAGTAACAAAATCCCAAAAGACAAAGCAAACAAACAAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV543752       --> ATTACATGACGAGTAACAAAATCCCAAAAGACAAAGCAAACAAACAAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545847       --> ATTACATGACGAGTAACAAAATCCCAAAAGACAAAGCAAACAAACAAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751992       --> ATTACATGACGAGTAACAAAATCCCAAAAGACAAAGCAAACAAACAAACA  Raphanus raphanistrum subsp. maritimus
FD565579       --> ATTACATGACGAGTAACAAAATCCCATAAGACAAAGCAAACAAACAAACA  Raphanus sativus var. oleiformis
FD974636       --> ATTACATGACGAGTAACAAAATCCCAAAAGACAAAGCAAACAAACAAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776129       --> ........ACGAGTAACAAAATCCCATAAGACAAAGCAAACAAACAAACA  Raphanus raphanistrum subsp. landra
FD555263       --> ..................................................  Raphanus raphanistrum subsp. landra
FD977736       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               101    -    151
UN15920        --> ATTCTTACAAGAAGAGGAGTAGCAGGCTACCTCTGGAGACTTAAGACAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714616       <-- ATTCTTACGAGAAGAGGAGTAGCAGGCTACCTCTGGAGACTTAAGACAGC
EX771777       <-- ATTCTTACAAGAAGAGGAGTAGCAGGCTAC-TCTGGAGACTTA-GACAGC
FD978297       <-- AT-CTTACA-GAAGAGGAGTAGCAGGCTAC-TCT-GAGACTTAAGACAGC
EV550574       <-- ATTCTTACAAGAAGAGGAGTAGCAGGCTACCTCTGGAGACTTAAGACAGC
EV567485       <-- ATTCTTACAAGAAGAGGAGTAGCAGGCTACCTCTGGAGACTTAAGACAGC
FD557471       <-- ..................................GGAGACTTAAGACAGT
EX747913       <-- .............................................ACAGC
FD979687       <-- ..................................................
EV547986       <-- ..................................................
FD561404       <-- ..................................................
FD978380       <-- ..................................................
EX772097       <-- ..................................................
FD559584       <-- ..................................................
FD987160       <-- ..................................................
EX773599       <-- ..................................................
EY932405       <-- ..................................................
FD990085       <-- ..................................................
EX772517       <-- ..................................................
FD982109       <-- ..................................................
FD965560       <-- ..................................................
EV572418       --> ATTCTTACAAGAAGAGGAGTAGCAGGCTACCTCTGGAGACTTAAGACAGC
FD553569       --> ATTCTTACAAGAAGAGGAGTAGCAGGCTACCTCTGGAGACTTAAGACAGT
FD975690       --> ATTCTTACAAGAAGAGGAGTAGCAGGCTACCTCTGGAGACTTAAGACAGC
EX776444       --> ATTCTTACAAGAAGAGGAGTAGCAGGCTACCTCTGGAGACTTAAGACAGC
FD974571       --> ATTCTTACAAGAAGAGGAGTAGCAGGCTACCTCTGGAGACTTAAGACAGC
EV543752       --> ATTCTTACAAGAAGAGGAGTAGCAGGCTACCTCTGGAGACTTAAGACAGC
EV545847       --> ATTCTTACAAGAAGAGGAGTAGCAGGCTACCTCTGGAGACTTAAGACAGC
EX751992       --> ATTCTTACAAGAAGAGGAGTAGCAGGCTACCTCTGGAGACTTAAGACAGC
FD565579       --> ATTCTTACAAGAAGAGGAGTAGCAGGCTACCTCTGGAGACTTAAGACAGC
FD974636       --> ATTCTTACAAGAAGAGGAGTAGCAGGCTACCTCTGGAGACTTAAGACAGC
EX776129       --> ATTCTTACAAGAAGAGGAGTAGCAGGCTACCTCTGGAGACTTAAGACAGC
FD555263       --> ..................................................
FD977736       --> ..................................................

               151    -    201
UN15920        --> AAAAGACTGATGTTGGGTTTGGTGCCTCATTTAAAAGTAGAGAGACGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714616       <-- AAAAGACTGATGTTGGGTTTGGTGCCTCATTTAAAAGTAGAGAGACGAGG
EX771777       <-- AAAAGACTGATGTTGGGTTTG-TG-CTCATTTAAAAGTAGAGAGACGAGG
FD978297       <-- AAAAGACTGATGTTGGGTTTGGTGACTCATTTAAAAGTAGAGAGACGAGG
EV550574       <-- AAAAGACTGATGTTGGGTTTGGTGCCTCATTTAAAAGTAGAGAGACGAGG
EV567485       <-- AAAAGACTGATGTTGGGTTTGGTGCCTCATTTAAAAGTAGAGAGACGAGG
FD557471       <-- AAAAGACTGATGTTGGGTTTGGTGC-TCATTTAAAAGTAGAGAGACGAGG
EX747913       <-- AAAAGACTGATGTTGGGTTTG-TG-CTCATTTAAAAGTAGAGAGACGAGG
FD979687       <-- ......................gtgCTCATTTAAAAGTAGAGAGACGAGG
EV547986       <-- ...........................CATTTAAAAGTAGAGAGACGAGG
FD561404       <-- ...........................CATTTAAAAGTAGAGAGACGAGG
FD978380       <-- .............................TTTAAAAGTAGAGAGACGAGG
EX772097       <-- ...............................TAAAAGTAGAGAGACGAGG
FD559584       <-- ...................................AGTAGAGAGACGAGG
FD987160       <-- ..................................................
EX773599       <-- ..................................................
EY932405       <-- ..................................................
FD990085       <-- ..................................................
EX772517       <-- ..................................................
FD982109       <-- ..................................................
FD965560       <-- ..................................................
EV572418       --> AAAAGACTGATGTTGGGTTTGGTGCCTCATTTAAAAGTAGAGAGACGAGG
FD553569       --> AAAAGACTGATGTTGGGTTTGGTGCCTCATTTAAAAGTAGAGAGACGAGG
FD975690       --> AAAAGACTGATGTTGGGTTTGGTGCCTCATTTAAAAGTAGAGAGACGAGG
EX776444       --> AAAAGACTGATGTTGGGTTTGGTGCCTCATTCAAAAGTAGAGAGACGAGG
FD974571       --> AAAAGACTGATGTTGGGTTTGGTGACTCATTTAAAAGTAGAGAGACGAGG
EV543752       --> AAAAGACTGATGTTGGGTTTGGTGCCTCATTTAAAAGTAGAGAGACGAGG
EV545847       --> AAAAGACTGATGTTGGGTTTGGTGCCTCATTTAAAAGTAGAGAGACGAGG
EX751992       --> AAAAGACTGATGTTGGGTTTGGTGCCTCATTTAAAAGTAGAGAGACGAGG
FD565579       --> AAAAGACTGATGTTGGGTTTGGTGCCTCATTTAAAAGTAGAGAGA.....
FD974636       --> AAAAGACTGATGTTGGGTTTGGTGCCTCATTTAAAAGTAGAGAGACGAGG
EX776129       --> CAAAGACTGATGTTGGGTTTGGTGCCTCATTTAAAAGTAGAGAGACGAGG
FD555263       --> ..................................................
FD977736       --> ..................................................

               201    -    251
UN15920        --> AAGTTTGTCCCTCAGATAGTAAAGTCTTGCTCTTCTCACTTTCCTGTGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714616       <-- AAGTTTGTCCCTCAGATAGTAAAGTCTTGCTCTTCTCACTTTCCTGTGGC
EX771777       <-- AAGTTTGTCCCTCAGATAGTAAAGTCTTGCTCTTCTCACTTTCCTGTGGC
FD978297       <-- AAGTTTGTCCCTCAGATAGTAAAGTCTTGCTCTTCTCACTTTCCTGTGGC
EV550574       <-- AAGTTTGCCCCTCAGATAGTAAAGTCTTGCTCTTCTCACTTTCCTGTGGC
EV567485       <-- AAGTTTGTCCCTCAGATAGTAAAGTCTTGCTCTTCTCACTTTCCTGTGGC
FD557471       <-- AAGTTTGTCCCTCAGATAGTAAAGTCTTGCTCTTCTCACTTTCCTGTGGC
EX747913       <-- AAGTTTGTCCCTCAGATAGTAAAGTCTTGCTCTTCTCACTTTCCTGTGGC
FD979687       <-- AAGTTTGTCCCTAAGATAGTAAAGTCTTGCTCTTCTCACTTTC-TGTGGC
EV547986       <-- AAGTTTGTCCCTCAGATAGTAAAGTCTTGCTCTTCTCACTTTCCTGTGGC
FD561404       <-- AAGTTTGTCCCTCAGATAGTAAAGTCTTGCTCTTCTCACTTTCCTGTGGC
FD978380       <-- AAGTTTGTCCCTCAGATAGTAAAGTCATGCTCTTCTCACTTTCCTGTGGC
EX772097       <-- AAGTTTGTCCCTCAGATAGTAAAGTCTTGCTCTTCTCACTTTCCTGTGGC
FD559584       <-- AAGTTTGTCCCTCAGATAGTAAAGTCTTGCTCTTCTCACTTTCCTGTGGC
FD987160       <-- ...............ATAGTAAAGTCTTGCTCTTCTCACTTTCCTGTGGC
EX773599       <-- ...............................................GGC
EY932405       <-- ..................................................
FD990085       <-- ..................................................
EX772517       <-- ..................................................
FD982109       <-- ..................................................
FD965560       <-- ..................................................
EV572418       --> AAGTTTGTCCCTCAAATAGTAAAGTCTTGCTCTTCTCACTTTCCTGTGGC
FD553569       --> AAGTTTGTCCCTCAGATAGTAAAGTCTTGCTCTTCTCACTTTCCTGTGGC
FD975690       --> AAGTTTGTCCCTAAGATAGTAAAGTCTTGCTCTTCTCACTTTCCTGTGGC
EX776444       --> AAGTTTGTCCCTCAAATAGTAAAGTCTTGCTCTTCTCACTTTCCTGTGGC
FD974571       --> AAGTTTGTCCCTCAGATAGTAAAGTCTTGCTCTTCTCACTTTCCTGTGGC
EV543752       --> AAGTTTGTCCCTCAGATAGTAAAGTCTTGCTCTTCTCACTTTCCTGTGGC
EV545847       --> AAGTTTGCCCCTCAGATAGTAAAGTCTTGCTCTTCTCACTTTCCTGTGGC
EX751992       --> AAGTTTGTCCCTCAAATAGTAAAGTCTTGCTCTTCTCACTTTCCTGTGGC
FD565579       --> ..................................................
FD974636       --> AAGTTTGTCCCTCAGATAGTAAAGTCATGCTCTTCTCACTTTCCTGTGGC
EX776129       --> AAGTTTGTCCCTCAGATAGTAAAGTCTTGCTCTTCTCACTTTCCTGTGGC
FD555263       --> ..............................................TGGC
FD977736       --> ..................................................

               251    -    301
UN15920        --> TTACCACTTTTATCTCCTTTATGTTGGGTGAGTATAAAGGAAAGACGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714616       <-- TTACCACTTTTATCTCCTTTATGTTGGGTGAGTATAAAGGAAAGACGATT
EX771777       <-- TTACCACTTTTATCTCCTTTATGTTGGGTGAGTATAAAGGAAAGACGATT
FD978297       <-- TTACCACTTTTATCTCCTTTATGTTGGGTGAGTATAAAGGAAAGACGATT
EV550574       <-- TTACCACTTTTATCTCCTTTATGTTGGGTGAGTATAAAGGAAAGACGATT
EV567485       <-- TTACCACTTTTATCTCCTTTATGTTGGGTGAGTATAAAGGAAAGACGATT
FD557471       <-- TTACCACTTTTATCTCCTTTATGTTGGGTGAGTATAAAGGAAAGACGATT
EX747913       <-- TTACCACTTTTATCTCCTTTATGTTGGGTGAGTATAAAGGAAAGACGATT
FD979687       <-- TTACCACTTTTGTCTCCTTTATGTTGGGTGAGTATAAAGGAAAGACGATT
EV547986       <-- TTACCACTTTTATCTCCTTTATGTTGGGTGAGTATAAAGGAAAGACGATT
FD561404       <-- TTACCACTTTTATCTCCTTTATGTTGGGTGAGTATAAAGGAAAGACGATT
FD978380       <-- TTACCACTTTTATCTCCTTTATGTTGGGTGAGTATAAAGGAAAGACGATT
EX772097       <-- TTACCACTTTTATCTCCTTTATGTTGGGTGAGTATAAAGGAAAGACGATT
FD559584       <-- TTACCACTTTTATCTCCTTTATGTTGGGTGAGTATAAAGGAAAGACGATT
FD987160       <-- TTACCACTTTTATCTCCTTTATGTTGGGTGAGTATAAAGGAAAGACGATT
EX773599       <-- TTACCACTTTTATCTCCTTTATGTTGGGTGAGTATAAAGGAAAGACGATT
EY932405       <-- ....................ATGTTGGGTGAGTATAAAGGAAAGACGATT
FD990085       <-- ......................................GGAAAGACGATT
EX772517       <-- ..................................................
FD982109       <-- ..................................................
FD965560       <-- ..................................................
EV572418       --> TTACCACTTTTATCTCCTTTATGTTGGGTGAGTATAAAGGAAAGACGATT
FD553569       --> TTACCACTTTTATCTCCTTTATGTTGGGTGAGTATAAAGGAAAGACGATT
FD975690       --> TTACCACTTTTGTCTCCTTTATGTTGGGTGAGTATAAAGGAAAGACGATT
EX776444       --> TTACCACTTTTATCTCCTTTATGTTGGGTGAGTATAAAGGAAAGACGATT
FD974571       --> TTACCACTTTTATCTCCTTTATGTTGGGTGAGTATAAAGGAAAGACGATT
EV543752       --> TTACCACTTTTATCTCCTTTATGTTGGGTGAGTATAAAGGAAAGACGATT
EV545847       --> TTACCACTTTTATCTCCTTTATGTTGGGTGAGTATAAAGGAAAGACGATT
EX751992       --> TTACCACTTTTATCTCCTTTATGTTGGGTGAGTATAAAGGAAAGACGATT
FD565579       --> ..................................................
FD974636       --> TTACCACTTTTATCTCCTTTATGTTGGGTGAGTATAAAGGAAAGACGATT
EX776129       --> TTACCACTTTTATCTCCTTTATGTTGGGTGAGTATAAAGGAAAGACGATT
FD555263       --> TTACCACTTTTATCTCCTTTATGTTGGGTGAGTATAAAGGAAAGACGATT
FD977736       --> ...............................................ATT

               301    -    351
UN15920        --> TCAACGCCAATGCCAGCAATGATTCTCCGGATACGAATAGTAGTGTGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714616       <-- TCAACGCCAATGCCAGCAATGATTCTCCGGATACGAATAGTAGTGTGGAT
EX771777       <-- TCAACGCCAATGCCAGCAATGATTCTCCGGATACGAATAGTGGTGTGGAT
FD978297       <-- TCAACGCCAATGCCAGCAATGATTCTCCGGATACGAATAGTAGTGTGGAT
EV550574       <-- TCAACGCCAATGCCAGCAATGATTCTCCGGATACGAATAGTAGTGTGGAT
EV567485       <-- TCAACGCCAATGCCAGCAATGATTCTCCGGATACGAATAGTGGTGTGGAT
FD557471       <-- TCAACGCCAATGCCAGCAATGATTCTCCGGATACGAATAGTGGTGTGGAT
EX747913       <-- TCAACGCCAATGCCAGCAATGATTCTCCGGATACGAATAGTAGTGTGGAT
FD979687       <-- TCAACGCCAATGCCAGCAATGATTCTCCGGATACGAATAGTAGTGTGGAT
EV547986       <-- TCAACGCCAATGCCAGCAATGATTCTCCGGATACGAATAGTAGTGTGGAT
FD561404       <-- TCAACGCCAATGCCAGCAATGATTCTCCGGATACGAATAGTAGTGTGGAT
FD978380       <-- TCAACGCCAATGCCAGCAATGATTCTCCGGATACGAATAGTAGTGTGGAT
EX772097       <-- TCAACGCCAATGCCAGCAATGATTCTCCGGATACGAATAGTGGTGTGGAT
FD559584       <-- TCAACGCCAATGCCAGCAATGATTCTCCGGATACGAATAGTAGTGTGGAT
FD987160       <-- TCAACGCTAATGCCAGCAATGATTCTCCGGATACGAATAGTAGTGTGGAT
EX773599       <-- TCAACGCCAATGCCAGCAATGATTCTCCGGATACGAATAGTGGTGTGGAT
EY932405       <-- TCAACGCCAATGCCAGCAATGATTCTCCGGATACGAATAGTAGTGTGGAT
FD990085       <-- TCAACGCCAATGCCAGCAATGATTCTCCGGATACGAATAGTGGTGTGGAT
EX772517       <-- ..................................................
FD982109       <-- ..................................................
FD965560       <-- ..................................................
EV572418       --> TCAACGCCAATGCCAGCAATGATTCTCCGGATACGAATAGTGGTGTGGAT
FD553569       --> TCAACGCCAATGCCAGCAATGATTCTCCGGATACGAATAGTGGTGTGGAT
FD975690       --> TCAACGCCAATGCCAGCAATGATTCTCCGGATACGAATAGTAGTGTGGAT
EX776444       --> TCAACGCCAATGCCAGCAATGATTCTCCGGATACGAATAGTGGTGTGGAT
FD974571       --> TCAACGCCAATGCCAGCAATGATTCTCCGGATACGAATAGTAGTGTGGAT
EV543752       --> TCAACGCCAATGCCAGCAATGATTCTCCGGATACGAATAGTAGTGTGGAT
EV545847       --> TCAACGCCAATGCCAGCAATGATTCTCCGGATACGAATAGTAGTGTGGAT
EX751992       --> TCAACGCCAATGCCAGCAATGATTCTCCGGATACGAATAGTAGTGTGGAT
FD565579       --> ..................................................
FD974636       --> TCAACGCCAATGCCAGCAATGATTCTCCGGATACGAATAGTAGTGTGGAT
EX776129       --> TCAACGCCAATGCCAGCAATGATTCTCCGGATACGAATAGTGGTGTGGAT
FD555263       --> TCAACGCCAATGCCAGCAATGATTCTCCGGATACGAATAGTAGTGTGGAT
FD977736       --> TCAACGCCAATGCCAGCAATGATT-TCCGGA-ACGAATAGTAGTGTGGAT

               351    -    401
UN15920        --> GCCTGCGTTTTGCCTAGACATCACTATCCCTTTGTAGATTGATAACCTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714616       <-- GCCTGCGTTTTGCCTAGACATCACTATCCCTTTGTAGATTGATAGCCTAC  Raphanus sativus var. oleiformis
EX771777       <-- GCCTGCGTTTTGCCTAGACATCACTATCCCTTTGTAGATTGATAGCCTAC  Raphanus raphanistrum subsp. landra
FD978297       <-- GCCTGCGTTTTGCCTAGACATCACTATCCCTTTGTAGATTGATAACCTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550574       <-- GCCTGCGTTTTGCCTAGACATCACTATCCCTTTGTAGATTGATAACCTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV567485       <-- GCCTGCGTTTTGCCTAGACATCACTATCCCTTTGTAGATTGATAGCCTAC  Raphanus raphanistrum subsp. landra
FD557471       <-- GCCTGCGTTTTGCCTAGACATCACTATCCCTTTGTAGATTGATAGCCTAC  Raphanus raphanistrum subsp. landra
EX747913       <-- GCCTGCGTTTTGCCTAGACATCACTATCCCTTTGTAGATTGATAACCTAC  Raphanus raphanistrum subsp. maritimus
FD979687       <-- GCCTGCGTTTTGCCTAGACATCACTATCCCTTTGTAGATTGATAACCTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV547986       <-- GCCTGCGTTTTGCCTAGACATCACTATCCCTTTGTAGATTGATAACCTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD561404       <-- GCCTGCGTTTTGCCTAGACATCACTATCCCTTTGTAGATTGATAGCCTAC  Raphanus sativus var. oleiformis
FD978380       <-- GCCTGCGTTTTGCCTAGACATCACTATCCCTTTGTAGATTGATAACCTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772097       <-- GCCTGCGTTTTGCCTAGACATCACTATCCCTTTGTAGATTGATAGCCTAC  Raphanus raphanistrum subsp. landra
FD559584       <-- GCCTGCGTTTTGCCTAGACATCACTATCCCTTTGTAGATTGATAACCTAC  Raphanus raphanistrum subsp. landra
FD987160       <-- GCCTGCGTTTTGCCTAGACATCACTATCCCTTTGTAGATTGATAACCTAC  Raphanus raphanistrum subsp. landra
EX773599       <-- GCCTGCGTTTTGCCTAGACATCACTATCCCTTTGTAGATTGATAGCCTAC  Raphanus raphanistrum subsp. landra
EY932405       <-- GCCTGCGTTTTGCCTAGACATCACTATCCCTTTGTAGATTGATAGCCTAC  Raphanus sativus var. oleiformis
FD990085       <-- GC-TGCGTTTTGCCTAGACATCACTATCCCTTTGTAGATTGATAGCCTAC  Raphanus raphanistrum subsp. landra
EX772517       <-- ......GTTTTGCCTAGACATCACTATCCCTTTGTAGATTGATAGCCTAC  Raphanus raphanistrum subsp. landra
FD982109       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD965560       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV572418       --> GCCTGCGTTTTGCCTAGACATCACTATCCCTTTGTAGATTGATAGCCTAC  Raphanus raphanistrum subsp. landra
FD553569       --> GCCTGCGTTTTGCCTAGACATCACTATCCCTTTGTAGATTGATAGCCTAC  Raphanus raphanistrum subsp. landra
FD975690       --> GCCTGCGTTTTGCCTAGACATCACTATCCCTTTGTAGATTGATAACCTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776444       --> GCCTGCGTTTTGCCTAAACATCACTATCCCTTTGTAGATTGATAGCCTAC  Raphanus raphanistrum subsp. landra
FD974571       --> GCCTGCGTTTTGCCTAGACATCACTATCCCTTTGTAGATTGATAACCTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV543752       --> GCCTGCGTTTTGCCTAAACATCACTATCCCTTTGTAGATTGATAACCTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545847       --> GCCTGCGTTTTGCCTAGACATCACTATCCCTTTGTAGATTGATAACCTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751992       --> GCCTGCGTTTTGCCTAGACATCACTATCCCTTTGTAGATTGATAACCTAC  Raphanus raphanistrum subsp. maritimus
FD565579       --> ..................................................  Raphanus sativus var. oleiformis
FD974636       --> GCCTGCGTTTTGCCTAGACATCACTATCCCTTTGTAGATTGATAACCTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776129       --> GCCTGCGTTTTGCCTAGACATCACTATCCCTTTGTAGATTGATAGCCTAC  Raphanus raphanistrum subsp. landra
FD555263       --> GCCTGCGTTTTGCCTAAACATCACTATCCCTTTGTAGATTGATAACCTAC  Raphanus raphanistrum subsp. landra
FD977736       --> GCCTGCGTTTTGCCTAGACATCACTATCCCTTTGTAGATTGATAACCTAC  Raphanus raphanistrum subsp. raphanistrum (NY)

               401    -    451
UN15920        --> GCCTGTTCTCAGGTACTTCCAGTTTGATCTCTACAATGTCCCCTGTCCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714616       <-- GCCTGTTCTCAGGTACTTCCAGTTTGATCTCTACAATGTCCCCTGTCCTA
EX771777       <-- GCCTGTTCTCAGGTACTTCCAGTTTGATCTCTACAATGTCCCCTGTCCTA
FD978297       <-- GCCTGTTCTCAGGTACTTCCAGTTTGATCTCTACAATGTCCCCTGTCCTA
EV550574       <-- GCCTGTTCTCAGGTACTTCCAGTTTGATCTCTACAATGTCCCCTGTCCTA
EV567485       <-- GCCTGTTCTCAGGTACTTCCAGTTTGATCACTACAATGTCCCCTGTCCTA
FD557471       <-- GCCTGTTCTCAGGTACTTCCAGTTTGATCTCTACAATGTCCCCTGTCCTA
EX747913       <-- GCCTGTTCTCAGGTACTTCCAGTTTGATCTCTACAATGTCCCCTGTCCTA
FD979687       <-- GCCTGTTCTCAGGTACTTCCAGTTTGATCTCTACAATGTCCCCTGTCCTA
EV547986       <-- GCCTGTTCTCAGGTACTTCCAGTTTGATCTCTACAATGTCCCCTGTCCTA
FD561404       <-- GCCTGTTCTCAGGTACTTCCAGTTTGATCTCTACAATGTCCCCTGTCCTA
FD978380       <-- GCCTGTTCTCAGGTACTTCCAGTTTGATCTCTACAATGTCCCCTGTCCTA
EX772097       <-- GCCTGTTCTCAGGTACTTCCAGTTTGATCTCTACAATGTCCCCTGTCCTA
FD559584       <-- GCCTGTTCTCAGGTACTTCCAGTTTGATCTCTACAATGTCCCCTGTCCTA
FD987160       <-- GCCTGTTCTCAGGTACTTCCAGTTTGATCTCTACAATGTCCCCTGTCCTA
EX773599       <-- GCCTGTTCTCAGGTACTTCCAGTTTGATCTCTACAATGTCCCCTGTCCTA
EY932405       <-- GCCTGTTCTCAGGTACTTCCAGTTTGATCTCTACAATGTCCCCTGTCCTA
FD990085       <-- GCCTGTTCTCAGGTACTTCCAGTTTGATCTCTACAATGTCCCCTGTCCTA
EX772517       <-- GCCTGTTCTCAGGTACTTCCAGTTTGATCTCTACAATGTCCCCTGTCCTA
FD982109       <-- ...............................................CTA
FD965560       <-- ..................................................
EV572418       --> GCCTGTTCTCAGGTACTTCCAGTTTGATCACTACAATGTCCCCTGTCCTA
FD553569       --> GCCTGTTCTCAGGTACTTCCAGTTTGATCTCTACAATGTCCCCTGTCCTA
FD975690       --> GCCTGTTCTCAGGTACTTCCAGTTTGATCTCTACAATGTCCCCTGTCCTA
EX776444       --> GCCTGTTCTCAGGTACTTCCAGTTTGATCTCTACAATGTCCCCTGTCCTA
FD974571       --> GCCTGTTCTCAGGTACTTCCAGTTTGATCTCTACAATGTCCCCTGTCCTA
EV543752       --> GCCTGTTCTCAGGTACTTCCAGTTTGATCTCTACAATGTCCCCTGTCCTA
EV545847       --> GCCTGTTCTCAGGTACTTCCAGTTTGATCTCTACAATGTCCCCTGTCCTA
EX751992       --> GCCTGTTCTCAGGTACTTCCAGTTTGATCTCTACAATGTCCCCTGTCCTA
FD565579       --> ..................................................
FD974636       --> GCCTGTTCTCAGGTACTTCCAGTTTGATCTCTACAATGTCCCCTGTCCTA
EX776129       --> GCCTGTTCTCAGGTACTTCCAGTTTGATCTCTACAATGTCCCCTGTCCTA
FD555263       --> GCCTGTTCTCAGGTACTTCCAGTTTGATCTCTACAATGTCCCCTGTCCTA
FD977736       --> GCCTGTTCTCAGGTACTTCCAGTTTGATCTCTACAATGTCCCCTGTCCTA

               451    -    501
UN15920        --> ATCTCTGGAACCGGTCTTACTTTCTCTGAAACCTCAATTGCTTTCTGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714616       <-- ATCTCTGGAACCGGTCTTACTTTCTCTGAAACCTCAATTGCTTTCTGGTT
EX771777       <-- ATCTCTGGAACCGGTCTTACTTTCTCTGAAACCTCAATTGCTTTCTGGTT
FD978297       <-- ATCTCTGGAACCGGTCTTACTTTCTCTGAAACCTCAATTGCTTTCTGGTT
EV550574       <-- ATCTCTGGAACCGGTCTTACTTTCTCTGAAACCTCAATTGCTTTCTGGTT
EV567485       <-- ATCTCTGGAACCGGTCTTACTTTCTCTGAAACCTCAATTGCTTTCTGGTT
FD557471       <-- ATCTCTGGAACCGGTCTTACTTTCTCTGAAACCTCAATTGCTTTCTGGTT
EX747913       <-- ATCTCTGGAACCGGTCTTACTTTCTCTGAAACCTCAATTGCTTTCTGGTT
FD979687       <-- ATCTCTGGAACCGGTCTTACTTTCTCTGAAACCTCAATTGCTTTCTGGTT
EV547986       <-- ATCTCTGGAACCGGTCTTACTTTCTCTGAAACCTCAATTGCTTTCTGGTT
FD561404       <-- ATCTCTGGAACCGGTCTTACTTTCTCTGAAACCTCAATTGCTTTCTGGTT
FD978380       <-- ATCTCTGGAACCGGTCTTACTTTCTCTGAAACCTCAATTGCTTTCTGGTT
EX772097       <-- ATCTCTGGAACCGGTCTTACTTTCTCTGAAACCTCAATTGCTTTCTGGTT
FD559584       <-- ATCTCTGGAACCGGTCTTACTTTCTCTGAAACCTCAATTGCTTTCTGGTT
FD987160       <-- ATCTCTGGAACCGGTCTTACTTTCTCTGAAACCTCAATTGCTTTCTGGTT
EX773599       <-- ATCTCTGGAACCGGTCTTACTTTCTCTGAAACCTCAATTGCTTTCTGGTT
EY932405       <-- ATCTCTGGAACCGGTCTTACTTTCTCTGAAACCTCAATTGCTTTCTGGTT
FD990085       <-- ATCTCTGGAACCGGTCTTACTTTCTCTGAAACCTCAATTGCTTTCTGGTT
EX772517       <-- ATCTCTGGAACCGGTCTTACTTTCTCTGAAACCTCAATTGCTTTCTGGTT
FD982109       <-- ATCTCTGGAACCGGTCTTACTTTCTCTGAAACCTCAATTGCTTTCTGGTT
FD965560       <-- ..................................................
EV572418       --> ATCTCTGGAACCGGTCTTACTTTCTCTGAAACCTCAATTGCTTTCTGGTT
FD553569       --> ATCTCTGGAACCGGTCTTACTTTCTCTGAAACCTCAATTGCTTTCTGGTT
FD975690       --> ATCTCTGGAACCGGTCTTACTTTCTCTGAAACCTCAATTGCTTTCTGGTT
EX776444       --> ATCTCTGGAACCGGTCTTACTTTCTCTGAAACCTCAATTGCTTTCTGGTT
FD974571       --> ATCTCTGGAACCGGTCTTACTTTCTCTGAAACCTCAATTGCTTTCTGGTT
EV543752       --> ATCTCTGGAACCGGTCTTACTTTCTCTGAAACCTCAATTGCTTTCTGGTT
EV545847       --> ATCTCTGGAACCGGTCTTACTTTCTCTGAAACCTCAATTGCTTTCTGGTT
EX751992       --> ATCTCTGGAACCGGTCTTACTTTCTCTGAAACCTCAATTGCTTTCTGGTT
FD565579       --> ..................................................
FD974636       --> ATCTCTGGAACCGGTCTTACTTTCTCTGAAACCTCAATTGCTTTCTGGTT
EX776129       --> ATCTCTGGAACCGGTCTTACTTTCTCTGAAACCTCAATTGCTTTCTGGTT
FD555263       --> ATCTCTGGAACCGGTCTTACTTTCTCTGAAACCTCAATTGCTTTCTGGTT
FD977736       --> ATCTCTGGAACCGGTCTTACTTTCTCTGAAACCTCAATTGCTTTCTGG..

               501    -    551
UN15920        --> CAGTATCCCCATGACATCTCCGAGCTTGGTCCTTGGCTTCCACGGAGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714616       <-- CAGTATCCCCATGACATCTCCGAGCTTGGTCCTTGGCTTCCACGGAGTTT
EX771777       <-- CAGTATCCCCATGACATCTCCGAGCTTGGTCCTTGGCTTCCAAGGAGTTT
FD978297       <-- CAGTATCCCCATGACATCTCCGAGCTTGGTCCTTGGCTTCCACGGAGTTT
EV550574       <-- CAGTATCCCCATGACATCTCCGAGCTTGGTCCTTGGCTTCCACGGAGTTT
EV567485       <-- CAGTATCCCCATGACATCTCCGAGCTTGGTCCTTGGCTTCCAAGGAGTTT
FD557471       <-- CAGTATCCCCATGACATCTCCGAGCTTGGTCCTTGGCTTCCAAGGAGTTT
EX747913       <-- CAGTATCCCCATGACATCTCCGAGCTTGGTCCTTGGCTTCCACGGAGTTT
FD979687       <-- CAGTATCCCCATGACATCTCCGAGCTTGGTCCTTGGCTTCCACGGAGTTT
EV547986       <-- CAGTATCCCCATGACATCTCCGAGCTTGGTCCTTGGCTTCCACGGAGTTT
FD561404       <-- CAGTATCCCCATGACATCTCCGAGCTTGGTCCTTGGCTTCCACGGAGTTT
FD978380       <-- CAGTATCCCCATGACATCTCCGAGCTTGGTCCTTGGCTTCCACGGAGTTT
EX772097       <-- CAGTATCCCCATGACATCTCCGAGCTTGGTCCTTGGCTTCCAAGGAGTTT
FD559584       <-- CAGTATCCCCATGACATCTCCGAGCTTGGTCCTTGGCTTCCACGGAGTTT
FD987160       <-- CAGTATCCCCATGACATCTCCGAGCTTGGTCCTTGGCTTCCACGGAGTTT
EX773599       <-- CAGTATCCCCATGACATCTCCGAGCTTGGTCCTTGGCTTCCAAGGAGTTT
EY932405       <-- CAGTATCCCCATGACATCTCCGAGCTTGGTCCTTGGCTTCCACGGAGTTT
FD990085       <-- CAGTATCCCCATGACATCTCCGAGCTTGGTCCTTGGCTTCCAAGGAGTTT
EX772517       <-- CAGTATCCCCATGACATCTCCGAGCTTGGTCCTTGGCTTCCAAGGAGTTT
FD982109       <-- CAGTATCCCCATGACATCTCCGAGCTTGGTCCTTGGCTTCCACGGAGTTT
FD965560       <-- ..................................................
EV572418       --> CAGTATCCCCATGACATCTCCGAGCTTGGTCCTTGGCTTCCAAGGAGTTT
FD553569       --> CAGTATCCCCATGACATCTCCGAGCTTGGTCCTTGGCTTCCAAGGAGTTT
FD975690       --> CAGTATCCCCATGACATCTCCGAGCTTGGTCCTTGGCTTCCACGGAGTTT
EX776444       --> CAGTATCCCCATGACATCTCCGAGCTTGGTCCTTGGCTTCCAAGGAGTTT
FD974571       --> CAGTATCCCCATGACATCTCCGAGCTTGGTCCTTGGCTTCCACGGAGTTT
EV543752       --> CAGTATCCCCATGACATCTCCGAACTTGGTCCTTGGCTTCCACGGAGTTT
EV545847       --> CAGTATCCCCATGACATCTCCGAGCTTGGTCCTTGGCTTCCACGGAGTTT
EX751992       --> CAGTATCCCCATGACATCTCCGAGCTTGGTCCTTGGCTTCCACGGAGTTT
FD565579       --> ..................................................
FD974636       --> CAGTATCCCCATGACATCTCCGAGCTTGGTCCTTGGCTTCCACGGAGTTT
EX776129       --> CAGTATCCCCATGACATCTCCGAGCTTGGTCCTTGGCTTCCAAGGAGTTT
FD555263       --> CAGTATCCCCATGACATCTCCGAGCTTGGTCCTTGGCTTCCACGGAGTTT
FD977736       --> ..................................................

               551    -    601
UN15920        --> TTGCTTCCTCGACCTCAGTGTCTTCTACTGTTTCAGCAACATCCTCCGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714616       <-- TTGCTTCCTCAACCCCATTGTCTTCTACc.....................
EX771777       <-- TTGCTTCCTCGACCTCAGTGGCTTCTACTGTTTCAGCAACATCCTCCGGA
FD978297       <-- TTGCTTCCTCGACCTCAGTGTCTTCTACTGTTTCAGCAACATCCTCCGGA
EV550574       <-- TTGCTTCCTCGACCTCAGTGTCTTCTACTGTTTCAGCAACATCCTCCGGA
EV567485       <-- TTGCTTCCTCGACCTCAGTGGCTTCTACTGTTTCAGCAACATCCTCCGGA
FD557471       <-- TTGCTTCCTCGACCTCAGTGGCTTCTACTGTTTCAGCAACATCCTCCGGA
EX747913       <-- TTGCTTCCTCGACCTCAGTGTCTTCTACTGTTTCAGCAACATCCTCCGGA
FD979687       <-- TTGCTTCCTCGACCTCAGTGTCTTCTACTGTTTCAGCAACATCCTCCGGA
EV547986       <-- TTGCTTCCTCGACCTCAGTGTCTTCTACTGTTTCAGCAACATCCTCCGGA
FD561404       <-- TTGCTTCCTCAACCTCATTGTCTTCTACTGTTTCAGCAACATCCTCCGGA
FD978380       <-- TTGCTTCCTCGACCTCAGTGTCTTCTACTGTTTCAGCAACATCCTCCGGA
EX772097       <-- TTGCTTCCTCGACCTCAGTGGCTTCTACTGTTTCAGCAACATCCTCCGGA
FD559584       <-- TTGCTTCCTCGACCTCAGTGTCTTCTACTGTTTCAGCAACATCCTCCGGA
FD987160       <-- TTGCTTCCTCGACCTCAGTGTCTTCTACTGTTTCAGCAACATCCTCCGGA
EX773599       <-- TTGCTTCCTCGACCTCAGTGGCTTCTACTGTTTCAGCAACATCCTCCGGA
EY932405       <-- TTGCTTCCTCAACCTCATTGTCTTCTACTGTTTCAGCAACATCCTCCGGA
FD990085       <-- TTGCTTCCTCGACCTCAGTGGCTTCTACTGTTTCAGCAACATCCTCCGGA
EX772517       <-- TTGCTTCCTCGACCTCAGTGGCTTCTACTGTTTCAGCAACATCCTCCGGA
FD982109       <-- TTGCTTCCTCGACCTCAGTGTCTTCTACTGTTTCAGCAACATCCTCCGGA
FD965560       <-- ..................................................
EV572418       --> TTGCTTCCTCGACCTCAGTGGCTTCTACTGTTTCAGCAACATCCTCCGGA
FD553569       --> TTGCTTCCTCGACCTCAGTGGCTTCTACTGTTTCAGCAACATCCTCCGGA
FD975690       --> TTGCTTCCTCGACCTCAGTGTCTTCTACTGTTTCAGCAACATCCTCCGGA
EX776444       --> TTGCTTCCTCGACCTCAGTGGCTTCTACTGTTTCAGCAACATCCTCCGGA
FD974571       --> TTGCTTCCTCGACCTCAGTGTCTTCTACTGTTTCAGCAACATCCTCCGGA
EV543752       --> TTGCTTCCTCGACCTCAGTGTCTTCTACTGTTTCAGCAACATCCTCCGGA
EV545847       --> TTGCTTCCTCGACCTCAGTGTCTTCTACTGTTTCAGCAACATCCTCCGGA
EX751992       --> TTGCTTCCTCGACCTCAGTGTCTTCTACTGTTTCAGCAACATCCTCCGGA
FD565579       --> ..................................................
FD974636       --> TTGCTTCCTCGACCTCAGTGTCTTCTACTGTTTCAGCAACATCCTCCGGA
EX776129       --> TTGCTTCCTCGACCTCAGTGGCTTCTACTGTTTCAGCAACATCCTCCGGA
FD555263       --> TTGCTTCCTCGACCTCAGTGTCTTCTACTGTTTCAGCAACATCCTCCGGA
FD977736       --> ..................................................

               601    -    651
UN15920        --> ACTGCTTCAGTGTCTTCACCTACAGTACTGCTCTCTTCGGCTTTAGCTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714616       <-- ..................................................
EX771777       <-- ACTGCTTCAGTGTCTTCACCTACAGTACTGCTCTCTTCGGCTTTAGCTAT
FD978297       <-- ACTGCTTCAGTGTCTTCACCTACAGTACTGCTCTCTTCGGCTTTAGCTAT
EV550574       <-- ACTGCTTCAGTGTCTTCACCTACAGTACTGCTCTCTTCGGCTTTAGCTAT
EV567485       <-- ACTGCTTCAGTGTCTTCACCTACAGTACTGCTCTCTTCGGCTTTAGCTAT
FD557471       <-- ACTGCTTCAGTGTCTTCACCTACAGTACTGCTCTCTTCGGCTTTAGCTAT
EX747913       <-- ACTGCTTCAGTGTCTTCACCTACAGTACTGCTCGCTTCGGCTTTAGCTAT
FD979687       <-- ACTGCTTCAGTGTCTTCACCTACAGTACTGCTCTCTTCGGCTTTAGCTAT
EV547986       <-- ACTGCTTCAGTGTCTTCACCTACAGTACTGCTCTCTTCGGCTTTAGCTAT
FD561404       <-- ACTGCTTCAGTGTCTTCACCTACAGTACTGCTCTCTTCGGCTTTAGCTAT
FD978380       <-- ACTGCTTCAGTGTCTTCACCTACAGTACTGCTCTCTTCGGCTTTAGCTAT
EX772097       <-- ACTGCTTCAGTGTCTTCACCTACAGTACTGCTCTCTTCGGCTTTAGCTAT
FD559584       <-- ACTGCTTCAGTGTCTTCACCTACAGTACTGCTCTCTTCGGCTTTAGCTAT
FD987160       <-- ACTGCTTCAGTGTCTTCACCTACAGTACTGCTCTCTTCGGCTTTAGCTAT
EX773599       <-- ACTGCTTCAGTGTCTTCACCTACAGTACTGCTCTCTTCGGCTTTAGCTAT
EY932405       <-- ACTGCTTCAGTGTCTTCACCTACAGTACTGCTCTCTTCGGCTTTAGCTAT
FD990085       <-- ACTGCTTCAGTGTCTTCACCTACAGTACTGCTCTCTTCGGCTTTAGCTAT
EX772517       <-- ACTGCTTCAGTGTCTTCACCTACAGTACTGCTCTCTTCGGCTTTAGCTAT
FD982109       <-- ACTGCTTCAGTGTCTTCACCTACAGTACTGCTCTCTTCGGCTTTAGCTAT
FD965560       <-- ..................................................
EV572418       --> ACTGCTTCAGTGTCTTCACCTACAGTACTGCTCTCTTCGGCTTTAGCT..
FD553569       --> ACTGCTTCAGTGTCTTCACCTACAGTACTGCTCTCTTCGGCTTTAGCTAT
FD975690       --> ACTGCTTCAGTGTCTTCACCTACAGTACTGCTCTCTTCGGCTTTAGCTAT
EX776444       --> ACTGCTTCAGTGTCTTCACCTACAGTACTGCTCTCTTCGGCTTTAGCTAT
FD974571       --> ACTGCTTCAGTGTCTTCACCTACAGTACTGCTCTCTTCGGCTTTAGCTAT
EV543752       --> ACTGCTTCAGTGTCTTCACCTACAGTACTGCTCTCTTCGGCTTTAGCTAT
EV545847       --> ACTGCTTCAGTGTCTTCACCTACAGTACTGCTCTCTTCGGCTTTAGCTAT
EX751992       --> ACTGCTTCAGTGTCTTCACCTACAGTACTGCTCGCTTCGGCTTTAGCTAT
FD565579       --> ..................................................
FD974636       --> ACTGCTTCAGTGTCTTCACCTACAGTACTGCTCTCTTCGGCTTTAGCTAT
EX776129       --> ACTGCTTCAGTGTCTTCACCTACAGTACTGCTCTCTTCGGCTTTAGCTAT
FD555263       --> ACTGCTTCAGTGTCTTCACCTACAGTACTGC...................
FD977736       --> ..................................................

               651    -    701
UN15920        --> AAACTCCCTTCGCTTCCTGGAACCGATTGCGAATCCAAAGTTCGAGCTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714616       <-- ..................................................  Raphanus sativus var. oleiformis
EX771777       <-- AAACCCCCTTCTCTTCCTGGAACCGATTGCGACTCCAAAGTTCGAGCTGG  Raphanus raphanistrum subsp. landra
FD978297       <-- AAACTCCCTTCGCTTCCTGGAACCGATTGCGAATCCAAAGTTCGAGCTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550574       <-- AAACTCCCTTCGCTTCCTGGAACCGATTGCGAATCCAAAGTTCGAGCTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV567485       <-- AAACTCCCTTCTCTTCCTGGAACCGATTGCGACTCCAAAGTTCGAGCTGG  Raphanus raphanistrum subsp. landra
FD557471       <-- AAACTCCCTTCTCTTCCTGGAACCGATTGCGACTCCAAAGTTCGAGCTGG  Raphanus raphanistrum subsp. landra
EX747913       <-- AAACTCCCTTCGCTTCCTGGAACCGATTGCGAATCCAAAGTTCGAGCTGG  Raphanus raphanistrum subsp. maritimus
FD979687       <-- AAACTCCCTTCGCTTCCTGGAACCGATTGTGAATCCAAAGTTCGAGCTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV547986       <-- AAACTCCCTTCGCTTACTGGAACCGATTGCGAATCCAAAGTTCGAGCTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD561404       <-- AAACTCCCTTCTCTTCCTGGAACCGATTGCGAATCCAACGTTCGAGCTGG  Raphanus sativus var. oleiformis
FD978380       <-- AAACTCCCCTCGCTTCCTGGAACCGATTGCGAATCCAAAGTTCGAGCTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772097       <-- AAACTCCCTTCTCTTCCTGGAACCGATTGCGACTCCAAAGTTCGAGCTGG  Raphanus raphanistrum subsp. landra
FD559584       <-- AAACTCCCTTCGCTTCCTGGAACCGATTGCGAATCCAAAGTTCGAGCTAG  Raphanus raphanistrum subsp. landra
FD987160       <-- AAACTCCCTTCGCTTCCTGGAACCGATTGCGAATCCAAAGTTCGAGCTGG  Raphanus raphanistrum subsp. landra
EX773599       <-- AAACCCCCTTCTCTTCCTGGAACCGATTGCGACTCCAAAGTTCGAGCTGG  Raphanus raphanistrum subsp. landra
EY932405       <-- AAACTCCCTTCTCTTCCTGGAACCGATTGCGAATCCAACGTTCGAGCTGG  Raphanus sativus var. oleiformis
FD990085       <-- AAACTCCCTTCTCTTCCTGGAACCGATTGCGACTCCAAAGTTCGAGCTGG  Raphanus raphanistrum subsp. landra
EX772517       <-- AAACTCCCTTCTCTTCCTGGAACCGATTGCGACTCCAAAGTTCGAGCTGG  Raphanus raphanistrum subsp. landra
FD982109       <-- AAACTCCCTTCGCTTCCTGGAACCGATTGCGAATCCAAAGTTCGAGCTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD965560       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV572418       --> ..................................................  Raphanus raphanistrum subsp. landra
FD553569       --> AAACTCCCTTCTCTTCCTGGAACCGATTGCGACTCCAAAGTTCGAGCTGG  Raphanus raphanistrum subsp. landra
FD975690       --> AAACTCCCTTCGCTTCCTGGAACCGATTGTGAATCCAAAGTTCGAGCTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776444       --> AAACTCCCTTCTCTTCCTGGAACCGATTGCGACTCCAAAGTTCGAGCTGG  Raphanus raphanistrum subsp. landra
FD974571       --> AAACTCCCTTCGCTTCCTGGAACCGATTGCGAATCCAAAGTTCGAGCTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV543752       --> AAACTCCCTTCGCTTACTGGAACCGATTGCGAATCCAAAGTTCGAGCTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545847       --> AAACTCCCTTCGCTTCCTGGAACCGATTGCGAATCCAAAGTTCGAGCTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751992       --> AAACTCCCTTCGCTTCCTGGAACCGATTGCGAATCCAAAGTTCGAGCTGG  Raphanus raphanistrum subsp. maritimus
FD565579       --> ..................................................  Raphanus sativus var. oleiformis
FD974636       --> AAACTCCCCTCGCTTCCTGGAACCGATTGCGAATCCAAAGTTCGAGCTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776129       --> AAACTCCCTTCTCTTCCTGGAACCGATTGCGACTCCAAAGTTCGAGCTGG  Raphanus raphanistrum subsp. landra
FD555263       --> ..................................................  Raphanus raphanistrum subsp. landra
FD977736       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               701    -    751
UN15920        --> AATGGTTTAGGGAAACCCTAGACAATGATATCCGAGAGTTCACTGATGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714616       <-- ..................................................
EX771777       <-- AATGGTTTAGGGAAACCCTAGACAATGATACCCGAGAGTTCACTGATGGT
FD978297       <-- AATGGTTTAGGGAAACCCTAGACAATGATATCCGAGAGTTCACTGATGGT
EV550574       <-- AATGGTTTAGGGAAACCCTAGACAATGATATCCGAGAGTTCACTGATGGT
EV567485       <-- AATGGTTTAGGGAAACCCTAGACAATGATACCCGAGAGTTCACTGATGGT
FD557471       <-- AATGGTTTAGGGAAACCCTAGACAATGATACCCGAGAGTTCACTGATGGT
EX747913       <-- AATGGTTTAGGGAAACCCTAGACAATGATATCCGAGAGTTCACTGATGGT
FD979687       <-- AATGGTTTAGGGAAACCCTAGACAATGATATCCGAGAGTTCACTGATGGT
EV547986       <-- AATGGTTTAGGGAAACCCTAGACAATGATATCCGAGAGTTCACTGATGAT
FD561404       <-- AATGGTTTAGGGAAACCCTAGACAATGATATCCGAGAGTTCACTGATGGT
FD978380       <-- AATGGTTTAGGGAAACCCTAGACAATGATATCCGAGAGTTCACTGATGGT
EX772097       <-- AATGGTTTAGGGAAACCCTAGACAATGATACCCGAGAGTTCACTGATGGT
FD559584       <-- AATGGTTTAGGGAAACCCTAGACAATGATATCCGAGAGTTCACTGATGGT
FD987160       <-- AATGGTTTAGGGAAACCCTAGACAATGATATCCGAGAGTTCACTGATGGT
EX773599       <-- AATGGTTTAGGGAAACCCTAGACAATGATACCCGAGAGTTCACTGATGGT
EY932405       <-- AATGGTTTAGGGAAACCCTAGACAATGATATCCGAGAGTTCACTGATGGT
FD990085       <-- AATGGTTTAGGGAAACCCTAGACAATGATACCCGAGAGTTCACTGATGGT
EX772517       <-- AATGGTTTAGGGAAACCCTAGACAATGATACCCGAGAGTTCACTGATGGT
FD982109       <-- AATGGTTTAGGGAAACCCTAGACAATGATATCCGAGAGTTCACTGATGGT
FD965560       <-- ..TGGTTTAGGGAAACCATAGACAATGATATCCGAGAGTTCACTGATGGT
EV572418       --> ..................................................
FD553569       --> AATGGTTTAGGGAAACCCTAGACAATGATACCCGAGAGTTCACTGATGGT
FD975690       --> AATGGTTTAGGGAAACCCTAGACAATGATATCCGAGAGTTCACTGATGGT
EX776444       --> AATGGT............................................
FD974571       --> ..................................................
EV543752       --> AATGG.............................................
EV545847       --> AATGGTTTAGGGAAACCCTAGACAATGATATCCGAGAGTTCACTGATGGT
EX751992       --> AATGGTTTAGGGAAACCCTAGACAATGATATCCGAGAGTTCACTGATGGT
FD565579       --> ..................................................
FD974636       --> AATGGTTTAGGGAAACCCTAGACAATGATATCCGAGAGTTCACTGATGGT
EX776129       --> AATGGTTTAGGGAAACCCTAGACAATGATACCCGAGAGTTCACTGATGGT
FD555263       --> ..................................................
FD977736       --> ..................................................

               751    -    801
UN15920        --> ATAAATGAAGAAACTCCTAGATTCTTACTTGGGATTCTCGGTATCATATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714616       <-- ..................................................  Raphanus sativus var. oleiformis
EX771777       <-- ATCAATGAAGAAACTCCTAGATTCTTACTAGGGATTCTCGGTATCATATG  Raphanus raphanistrum subsp. landra
FD978297       <-- ATAAATGAAGAAACTCCTAGATTCTTACTTGGGATTCTCGGTATCATATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550574       <-- ATAAATGAAGAAACTCCTAGATTCTTACTTGGGATTCTCGGTATCATATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV567485       <-- ATCAATGAAGAAACTCCTAGATTCTTACTAGGGATTCTCGGTATCATATG  Raphanus raphanistrum subsp. landra
FD557471       <-- ATCAATGAAGAAACTCCTAGATTCTTACTAGGGATTCTCGGTATCATATG  Raphanus raphanistrum subsp. landra
EX747913       <-- ATAAATGAAGAAACTCCTAGATTCTTACTTGGGATTCTCGGTATCATATG  Raphanus raphanistrum subsp. maritimus
FD979687       <-- ATAAATGAAGAAACTCCTAGATTCTTACTTGGGATTCTCGGTATCATATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV547986       <-- ATAAATGAAGAAACTCCTAGATTCTTACTTGGGATTCTCGGTATCATATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD561404       <-- ATAAGTGAAGAAACTCCTAGATTCTTACTAGGGATTCTCGTCATCATATG  Raphanus sativus var. oleiformis
FD978380       <-- ATAAATGAAGAAACTCCTAGATTCTTACTTGGGATTCTCGGTATCATATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772097       <-- ATCAATGAAGAAACTCCTAGATTCTTACTAGGGATTCTCGGTATCATATG  Raphanus raphanistrum subsp. landra
FD559584       <-- ATAAATGAAGAAACTCCTAGATTCTTACTTGGGATTCTCGGTATCATATG  Raphanus raphanistrum subsp. landra
FD987160       <-- ATAAATGAAGAAACTCCTAGATTCTTGCTTGGGATTCTCGGTATCATATG  Raphanus raphanistrum subsp. landra
EX773599       <-- ATCAATGAAGAAACTCCTAGATTCTTACTAGGGATTCTCGGTATCATATG  Raphanus raphanistrum subsp. landra
EY932405       <-- ATAAGTGAAGAAACTCCTAGATTCTTACTAGGGATTCTCGTTATCATATG  Raphanus sativus var. oleiformis
FD990085       <-- ATCAATGAAGAAACTCCTAGATTCTTACTAGGGATTCTCGGTATCATATG  Raphanus raphanistrum subsp. landra
EX772517       <-- ATCAATGAAGAAACTCCTAGATTCTTACTAGGGATTCTCGGTATCATATG  Raphanus raphanistrum subsp. landra
FD982109       <-- ATAAATGAAGAAACTCCTAGATTCTTACTTGGGATTCTCGGTATCATATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD965560       <-- ATAAATGAAGAAACTCCTAGATTCTTACTTGGGATTCTCGGTATCATATG  Raphanus raphanistrum subsp. maritimus
EV572418       --> ..................................................  Raphanus raphanistrum subsp. landra
FD553569       --> ATCAATGAAGAAACTCCTAGATTCTTACTAGGGATTCTCGGTATCATATG  Raphanus raphanistrum subsp. landra
FD975690       --> ATAAATGAAGAAACTCCTAGATTCTTACTTGGGAT-CTCGGTATCATATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776444       --> ..................................................  Raphanus raphanistrum subsp. landra
FD974571       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV543752       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545847       --> ATAAATGAAGAAACTCCTAGATTCTTACTTGGGATTCTCGGTATCATATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751992       --> ATAAATGAAGAAACTCCTAGATTCTTACTTG...................  Raphanus raphanistrum subsp. maritimus
FD565579       --> ..................................................  Raphanus sativus var. oleiformis
FD974636       --> ATAAATGA..........................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776129       --> ATCAATGAAGAAACTCCTAGATTCTTA.......................  Raphanus raphanistrum subsp. landra
FD555263       --> ..................................................  Raphanus raphanistrum subsp. landra
FD977736       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               801    -    851
UN15920        --> CAGTGCCTGAGGAAGAAGAAGATGAGAGCTAGTCGCCATGTTTGCAGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714616       <-- ..................................................  Raphanus sativus var. oleiformis
EX771777       <-- CAGTGCCTGAGGAAGAAGAAGATGAGAGCTAGTCGCCATGGTTGCA....  Raphanus raphanistrum subsp. landra
FD978297       <-- CAGTGCCTGAGGAAGAAGAAGATGAGAGCTAGTCGCCATGTTTGCAGAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550574       <-- CAGTGCCTGAGGAAGAAGAAGATGAGAGCTAGTCGCCATGTTTGCAGAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV567485       <-- CAGTGCCTGAGGAAGAAGAAGATGAGAGCTAGTCGCCATGGTTGCACAGG  Raphanus raphanistrum subsp. landra
FD557471       <-- CAGTGCCTGAGGAAGAAGAAGATGAGAGCTAGTCGCCATGgttca.....  Raphanus raphanistrum subsp. landra
EX747913       <-- CAGTGCCTGAGGAAGAAGAAGATGAGAGCTAGTCGCCATGTTTGCAGAGT  Raphanus raphanistrum subsp. maritimus
FD979687       <-- CAGTGCCTGAGGAAGAAGAAGATGAGAGCTAGTCGCCATGTTTGCAGAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV547986       <-- CAGTGCCTGAGGAAGAAGAAGATGAGAGCTAGTCGCCATGTTTGCAGAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD561404       <-- CAGTGCCTGAGGAAGAAGAAGATGAGAGCTAGTCGCCATGGTTGCACAGG  Raphanus sativus var. oleiformis
FD978380       <-- CAGTGCCTGAGGAAGAAGAAGATGAGAGCTAGTCGCCATGTTTGCAGAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772097       <-- CAGTGCCTGAGGAAGAAGAAGATGAGAGCTAGTCGCCATGGTTGCA....  Raphanus raphanistrum subsp. landra
FD559584       <-- CAGTGCCTGAGGAAGAAGAAGATGAGAGCTAGTCGCCATGTTTGCAGAGT  Raphanus raphanistrum subsp. landra
FD987160       <-- CAGTGCCTGAGGAAGAAGAAGATGAGAGCTAGTCGCCATGTTTGCAGAGT  Raphanus raphanistrum subsp. landra
EX773599       <-- CAGTGCCTGAGGAAGAAGAAGATGAGAGCTAGTCGCCATGGTTGCA....  Raphanus raphanistrum subsp. landra
EY932405       <-- CAGTGCCTGAGGAAGAAGAAGATGAGAGCTAGCCGCCATGGTTGCA....  Raphanus sativus var. oleiformis
FD990085       <-- CAGTGCCTGAGGAAGAAGAAGATGAGAGCTAGTCGCCATGGTTGCACAGG  Raphanus raphanistrum subsp. landra
EX772517       <-- CAGTGCCTGAGGAAGAAGAAGATGAGAGCTAGTCGCCATGGTTGCA....  Raphanus raphanistrum subsp. landra
FD982109       <-- CAGTGCCTGAGGAAGAAGAAGATGAGAGCTAGTCGCCATGTTTGCAGAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD965560       <-- CAGTGCCTGAGGAAGAAGAAGATGAGAGCTAGTCGCCATGTTTGCAGA..  Raphanus raphanistrum subsp. maritimus
EV572418       --> ..................................................  Raphanus raphanistrum subsp. landra
FD553569       --> CAGTGCCTGAG-AAGAAGA-GATGAGAGCTAGTCGCCATGgttc......  Raphanus raphanistrum subsp. landra
FD975690       --> CAGTG.............................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776444       --> ..................................................  Raphanus raphanistrum subsp. landra
FD974571       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV543752       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545847       --> CAGTGCCTGAGGAAGAAGAAGATGAGAGCTAGTCGCCATGTTTGCAGAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751992       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD565579       --> ..................................................  Raphanus sativus var. oleiformis
FD974636       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX776129       --> ..................................................  Raphanus raphanistrum subsp. landra
FD555263       --> ..................................................  Raphanus raphanistrum subsp. landra
FD977736       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               851    -    901
UN15920        --> A--CGAAGCCTTATCAGCTTCTGCGTTTTAGCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW714616       <-- ..................................
EX771777       <-- ..................................
FD978297       <-- A--CGAAGCCTTATCAGCTTCc............
EV550574       <-- A--CGAAGCCTcc.....................
EV567485       <-- AAACGAAGCCTTATCAGCTTCTGCGTTTTAGCCC
FD557471       <-- ..................................
EX747913       <-- A--CGAAGCCTcc.....................
FD979687       <-- A--CGAAGCCTc......................
EV547986       <-- A--CGAAGCCTTATCcc.................
FD561404       <-- AAACGAAGCCTTATCAGCTTCTGCGTTTTAGCCC
FD978380       <-- A--CGAAGCCTTATCcc.................
EX772097       <-- ..................................
FD559584       <-- A--CGAAGCCTTcc....................
FD987160       <-- A--CGAAGCCTTATCAGCTTCTGCcc........
EX773599       <-- ..................................
EY932405       <-- ..................................
FD990085       <-- AAACGAAGCCTTcc....................
EX772517       <-- ..................................
FD982109       <-- A--Ccc............................
FD965560       <-- ..................................
EV572418       --> ..................................
FD553569       --> ..................................
FD975690       --> ..................................
EX776444       --> ..................................
FD974571       --> ..................................
EV543752       --> ..................................
EV545847       --> A--CGAA...........................
EX751992       --> ..................................
FD565579       --> ..................................
FD974636       --> ..................................
EX776129       --> ..................................
FD555263       --> ..................................
FD977736       --> ..................................