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Alignment for radish unigene UN15969

               1      -     51
UN15969        --> GGACGAAAAAGGGCTCAGCTTATGAAAGTCGATATTTCGAGACATGGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564760       <-- ..................................................
EV535919       <-- ..................................................
FD550771       <-- ..................................................
EV548402       <-- ..................................................
EV549483       <-- ..................................................
FD950085       <-- ..................................................
EV536488       <-- ..................................................
FD954261       <-- ..................................................
FD540957       <-- ..................................................
EY915200       <-- ..................................................
EY908068       <-- ..................................................
FD544335       <-- ..................................................
EV538538       <-- ..................................................
EV535365       <-- ..................................................
EV538737       <-- ..................................................
EV549461       <-- ..................................................
FD544086       <-- ..................................................
FD939067       <-- ..................................................
EY946656       <-- ..................................................
EX766127       <-- ..................................................
FD972890       <-- ..................................................
FD540133       <-- ..................................................
FD539767       --> GGACGAAAAAGGGCTCAGCTTATGAAAGTCGATATTTCGAGACATGGTAC
EX752928       --> .............CTCAGCTTATGAAAGTCGATATTTCGAGACATGGTAC
EV540924       --> .....................ATGAAAGTCGATATTTCGAGACATGGTAC
EV540068       --> ..................................................
EV540482       --> ..................................................
EV542679       --> ..................................................
EX769813       --> ..................................................
EY903840       --> ..................................................
FD536697       --> ..................................................
FD546684       --> ..................................................
FD968689       --> ..................................................
FD537353       --> ..................................................
FD539970       --> ..................................................
EV544077       --> ..................................................
EV570587       --> ..................................................
EV570588       --> ..................................................
EY895229       --> ..................................................
EV542523       --> ..................................................

               51     -    101
UN15969        --> ATGTTAAAATGCGGAATTTTATATAAAATATGACCTTAAA-GATATAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564760       <-- ................TTTTTTAGAAAATATGA--CTAAA-GATATAAA-  Raphanus sativus var. oleiformis
EV535919       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD550771       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548402       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV549483       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD950085       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV536488       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954261       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD540957       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY915200       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908068       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544335       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538538       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535365       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538737       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549461       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544086       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD939067       <-- ..................................................  Raphanus sativus var. oleiformis
EY946656       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX766127       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD972890       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540133       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539767       --> ATGTTGAAATGCGGAATTTTATATAAAATATGACCTTAAA-GATATAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752928       --> ATGCTAATATGCGGAATATTTTAGAAAATATGACCTTAAA-GATGTAAAA  Raphanus raphanistrum subsp. maritimus
EV540924       --> ATGTTAAAATGCGGAATTTTATATAAAATATGACCTTAAA-GATATAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540068       --> ..GTTAAAATGCGGAATTTTATATAAAATATGACCTTAAA-GATATAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540482       --> ..GTTAAAATGCGGAATTTTATATAAAATATGACCTTAAA-GATATAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542679       --> ..GTTAAAATGCGGAATTTTATATAAAATATGACCTTAAA-GATATAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX769813       --> ..ggTAAAATGCGGAATTTTATATAAAATATGACCTTAAAAGATATAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY903840       --> .....AAAATGCGGAATTTTATATAAAATATGACCTTAAA-GATATAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536697       --> .....AAAATGCGGAATTTTGTATAAAATATGACCTTAAA-GATATAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD546684       --> .....AAAATGCGGAATTTTATATAAAATATGACCTTAAAAGATATAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD968689       --> .....AAAATGCGGAATTTTATATAAAATATGACCTTAAA-GATATAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537353       --> ....................gTATAAAATATGACCTTAAA-GATATAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539970       --> ....................gTATAAAATATGACCTTAAA-GATATAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV544077       --> .......................gAAAATATGACCTTAAA-GATATAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570587       --> ......................agAAAATATGACCTTAAA-GATGTAAAA  Raphanus raphanistrum subsp. landra
EV570588       --> ......................agAAAATATGACCTTAAA-GATGTAAAA  Raphanus raphanistrum subsp. landra
EY895229       --> .....................................AAA-GATGTAAAA  Raphanus raphanistrum subsp. maritimus
EV542523       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               101    -    151
UN15969        --> CATTCGTTCAGGAAAAAGAAATACATTTTACTCAACAAAATAAATATAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564760       <-- CA-TCGTTCGGGAAAA-GAAATACATTT-ACTCAACAAAATAAATATAAA  Raphanus sativus var. oleiformis
EV535919       <-- ....................ATACATTT-ACTCA-C-AAATAAATATAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD550771       <-- ..............................ttactcacaaatAATATAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548402       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV549483       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD950085       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV536488       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954261       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD540957       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY915200       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908068       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544335       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538538       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535365       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538737       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549461       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544086       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD939067       <-- ..................................................  Raphanus sativus var. oleiformis
EY946656       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX766127       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD972890       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540133       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539767       --> CATTCGTTCAGGAAAAAGAAATACATTTTACTCAACAAAATAAATATAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752928       --> CCTTCGTTCGGGAAAAAGAAATACATTTTACTCAACAAAATAAATATAAA  Raphanus raphanistrum subsp. maritimus
EV540924       --> CATTCGTTCAGGAAAAAGAAATACATTTTACTCAACAAAATAAATATAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540068       --> CATTCGTTCAGGAAAAAGAAATACATTTTACTCAACAAAATAAATATAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540482       --> CATTCGTTCAGGAAAAAGAAATACATTTTACTCAACAAAATAAATATAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542679       --> CATTCGTTCAGGAAAAAGAAATACATTTTACTCAACAAAATAAATATAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX769813       --> CATTCGTTCAGGAAAAAGAAATACATTTTACTCAACAAAATAAATATAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY903840       --> CATTCGTTCAGGAAAAAGAAATACGTTTTACTCAACAAAATAAATATAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536697       --> CATTCGTTCAGGAAAAAGAAATACATTTTACTCAACAAAATAAATATAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD546684       --> CATTCGTTCAGGAAAAAGAAATACATTTTACTCAACAAAATAAATATAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD968689       --> CATTCGTTCAGGAAAAAGAAATACATTTTACTCAACAAAATAAATATAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537353       --> CATTCGTTCAGGAAAAAGAAATACATTTTACTCAACAAAATAAATATAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539970       --> CATTCGCTCAGGAAAAAGAAATACATTTTACTCAACAAAATAAATATAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV544077       --> CATTCGTTCGGGAAAAAGAAATACATTTTACTCAACAAAATAAATATAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570587       --> CTTTCGTTCGGGAAAAAGAAATACATTTTACTCAACAAAATAAATATAAA  Raphanus raphanistrum subsp. landra
EV570588       --> CTTTCGTTCGGGAAAAAGAAATACATTTTACTCAACAAAATAAATATAAA  Raphanus raphanistrum subsp. landra
EY895229       --> CTTTCGTTCGGGAAAAAGAAATACATTTTACTCAACAAAATAAATATAAA  Raphanus raphanistrum subsp. maritimus
EV542523       --> .......cCAGGAAAAAGAAATACATTTTACTCAACAAAATAAATATAAA  Raphanus raphanistrum subsp. raphanistrum (MS)

               151    -    201
UN15969        --> TACATTTTACCTGAACATAGTAAACATTCCAAAGATTGAGAAATCTTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564760       <-- TACATTT-ACCCGAACATAGTAAACATTCCAGAGATTGAGAAATCTTTGT  Raphanus sativus var. oleiformis
EV535919       <-- TACATTT-A-CTGAACATAGTAAACATTCCAAAGAT-GAGAAATCTTTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD550771       <-- TACATTT-ACCTGAACATAGTAAACAT-CCAAAGAT-GAGAAATCTTTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548402       <-- .ACATTTTACCCGAACATAGTAAACATTCCAGAGATTGAGAAATCTTTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV549483       <-- ..........ccGAACATAGTAAACATTCCAGAGATTGAGAAATCTTTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD950085       <-- ...............CATAGTAA-CAT-CCAGAGAT-GAGAAATCTT-GT  Raphanus sativus cv Early Scarlet Globe
EV536488       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954261       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD540957       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY915200       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908068       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544335       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538538       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535365       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538737       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549461       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544086       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD939067       <-- ..................................................  Raphanus sativus var. oleiformis
EY946656       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX766127       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD972890       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540133       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539767       --> TACATTTTACCTGAACATAGTAAACATTCCAAAGATTGAGAAATCTCTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752928       --> TACATTTTACCCGAACATAGTAAACATTCCAGAGATTGAGAAATCTTTGT  Raphanus raphanistrum subsp. maritimus
EV540924       --> TACATTTTACCTGAACATAGTAAACATTCCAAAGATTGAGAAATCTTTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540068       --> TACATTTTACCTGAACATAGTAAACATTCCAAAGATTGAGAAATCTTTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540482       --> TACATTTTACCTGAACATAGTAAACATTCCAAAGATTGAGAAATCTTTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542679       --> TACATTTTACCTGAACATAGTAAACATTCCAAAGATTGAGAAATCTTTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX769813       --> TACATTTTACCTGAACATAGTAAACATTCCAAAGATTGAAAAATCTTTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY903840       --> TACATTTTACCTGAACATAGTAAACATTCCAAAGATTGAGAAATCTTTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536697       --> TACATTTTACCTGAACATAGTAAACATTCCAAAGATTGAGAAATCTTTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD546684       --> TACATTTTACCTGAACATAGTAAACATTCCAAAGATTGAGAAATCTTTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD968689       --> TACATTTTACCTGAACATAGTAAACATTCCAAAGATTGAGAAATCTTTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537353       --> TACATTTTACCTGAACATAGTAAACATTCCAAAGATTGAGAAATCTTTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539970       --> TACATTTTACCTGAACATAGTAAACATTCCAAAGATTGAGAAATCTCTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV544077       --> TACATTTTACCCGAACATAGTAAACATTCCAGAGATTGAGAAATCTTTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570587       --> TACATTTTACCCGAACATAGTAAACATTCCAGAAATTGAGAAATCTTTGT  Raphanus raphanistrum subsp. landra
EV570588       --> TACATTTTACCCGAACATAGTAAACATTCCAGAGATTGAGAAATCTTTGT  Raphanus raphanistrum subsp. landra
EY895229       --> TACATTTTACCCGAACATAGTAAACATTCCAGAGATTGAGAAATCTTTGT  Raphanus raphanistrum subsp. maritimus
EV542523       --> TACATTTTACCTGAACATAGTAAACATTCCAAAGATTGAGAAATCTTTGT  Raphanus raphanistrum subsp. raphanistrum (MS)

               201    -    251
UN15969        --> AGACTCAATCACTCATATGATTCTAAACCGTCAAGTACTTTAGAACCGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564760       <-- AGACTCA-TCACTCATAT--GT-TACACTGTCAAGTACTTTAGAACCGAA  Raphanus sativus var. oleiformis
EV535919       <-- AGACTCAATCCCTCATATGATTCTAAACCGTCAAGTACTTTAGAACCGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD550771       <-- CGACTCAATCACTCATATGAT-CTAAACCGTCAAGTACTTTAGAACCGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548402       <-- AGACTCA-TCACTCATAT--GT-TACACCGTCAAGTACTTTAGAACCGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV549483       <-- AGACTCA-TCACTCATAT--GT-TACACCGTCAAGTACTTTAGAACCGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD950085       <-- AGACCCA-TCACTCATATG-T--TACAC-GTCAAGTACTT-AGAACCGAA  Raphanus sativus cv Early Scarlet Globe
EV536488       <-- ..............ATATGATTCTAAACCGTCAAGTACTTTAGAACCGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954261       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD540957       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY915200       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908068       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544335       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538538       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535365       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538737       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549461       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544086       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD939067       <-- ..................................................  Raphanus sativus var. oleiformis
EY946656       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX766127       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD972890       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540133       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539767       --> AGACTCAATCACTCATATGATTCTAAACCGTCAAGTACTTTAGAACCGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752928       --> AGACTCA-TCACTCATATG--T-TACACCGTCAAGTACTTTAGAACCGAA  Raphanus raphanistrum subsp. maritimus
EV540924       --> AGACTCAATCCCTCATATGATTCTAAACCGTCAAGTACTTTAGAACCGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540068       --> AGACTCAATCACTCATATGATTCTAAACCGTCAAGTACTTTAGAACCGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540482       --> AGACTCAATCCCTCATATGATTCTAAACCGTCAAGTACTTTAGAACCGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542679       --> AGACTCAATCACTCATATGATTCTAAACCGTCAAGTACTTTAGAACCGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX769813       --> CGACTCAATCACTCATATGATTCTAAACCGTCAAGTACTTTAGAACCGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY903840       --> AGACTCAATCCCTCATATGATTCTAAACCGTCAAGTACTTTAGAACCGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536697       --> AGACTCAATCCCTCATATGATTCTAAACCGTCAAGTACTTTAGAACCGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD546684       --> CGACTCAATCACTCATATGATTCTAAACCGTCAAGTACTTTAGAACCGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD968689       --> AGACTCAATCCCTCATATGATTCTAAACCGTCAAGTACTTTAGAACCGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537353       --> AGACTCAATCCCTCATATGATTCTAAACCGTCAAGTACTTTAGAACCGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539970       --> AGACTCAATCACTCATATGATTCTAAACCGTCAAGTACTTTAGAACCGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV544077       --> AGACTCA-TCACTCATATG--T-TACACCGTCAAGTACTTTAGAACCGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570587       --> AGACTCA-TCACTCATATG--T-TACACCGTCAAGTACTTTAAAACCGAA  Raphanus raphanistrum subsp. landra
EV570588       --> AGACTCA-TCACTCATATG--T-TACACCGTCAAGTACTTTAGAACCGAA  Raphanus raphanistrum subsp. landra
EY895229       --> AGACTCA-TCACTCATATG--T-TACACCGTCAAGTACTTTAGAACCGAA  Raphanus raphanistrum subsp. maritimus
EV542523       --> AGACTCAATCACTCATATGATTCTAAACCGTCAAGTACTTTAGAACCGAA  Raphanus raphanistrum subsp. raphanistrum (MS)

               251    -    301
UN15969        --> GCACGTACCTTCTCC-ATGTAATCTCCTGCTTCTTTCTGGTTCCCTCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564760       <-- GCACGTACCTTCTCC-ATGTAATCTCCTGCTTCTTTCTGGTTCCCTCTGT
EV535919       <-- GCACGTACTTTCTCT-ATGTAATCTCATACTTCTTTCTGATTCCCTCTGT
FD550771       <-- GCACGTACCTTCTCC-ATGTAATCTCCTGCTTCTTTCTGGTTCCCTCTGT
EV548402       <-- GCACGTACTTTCTCC-ATGTAATCTCGTGCTTCTTTCTGGTTCCCTCTGT
EV549483       <-- GCACGTACTTTCTCC-ATGTAATCTCGTGCTTCTTTCTGGTTCCCTCTGT
FD950085       <-- GCACGTAC-TTCTCC-ATGTAGTCTC-TGCTTCTTTCTGGTTCCCTCTGT
EV536488       <-- GCACGTACCTTCTCC-ATGTAATCTC-TGCTTCTTTCTGGTTCCCTCTGT
FD954261       <-- GCACGTACTTTCTCCCATGTAATCTC-TGCTTCTTTCTGGTTCCCTCTGT
FD540957       <-- .CACGTAC-TTCTCC-ATGTA-TCT-CTGCTTCTTTCTGGTTCCCTCTGT
EY915200       <-- ..........TCTCC-ATGTA-TCT-CTGCTTCTTTCTGGTTCCCTCTGT
EY908068       <-- ..............C-ATGTA-TCT-CTGCTTCTTTCTGGTTCCCTCTGT
FD544335       <-- .............tcaATGTAATCTC-TGCTTCTTTCTGGTTCCCTCTGT
EV538538       <-- ............................GCTTCTTTCTGGTTCCCTCTGT
EV535365       <-- ..............................TTCTTTCTGGTTCCCTCTGT
EV538737       <-- ..............................TTCTTTCTGGTTCCCTCTGT
EV549461       <-- ..............................TTCTTTCTGGTTCCCTCTGT
FD544086       <-- ..............................TTCTTTCTGGTTCCCTCTGT
FD939067       <-- ...............................TCTTTCTGGTTCCCTCTGT
EY946656       <-- ......................................GGTTCCCTCTGT
EX766127       <-- ..................................................
FD972890       <-- ..................................................
FD540133       <-- ..................................................
FD539767       --> GCACGTACCTTCTCC-ATGTAATCTCCTGCTTCTTTCTGGTTCCCTCTGT
EX752928       --> GTACGTACCTTCTCC-ATGTAATCTCCTGCTTCTTTCTGGTTCCCTCTGT
EV540924       --> GCACGTACCTTCTCC-ATGTAATCTCCTGCTTCTTTCTGGTTCCCTCTGT
EV540068       --> GCACGTACCTTCTCC-ATGTAATCTCCTGCTTCTTTCTGGTTCCCTCTGT
EV540482       --> GCACGTACCTTCTCT-ATGTAATCTCCTACTTCTTTCTGATTCCCTCTGT
EV542679       --> GCACGTACCTTCTCC-ATGTAATCTCCTGCTTCTTTCTGGTTCCCTCTGT
EX769813       --> GCACGTACCTTCTCC-ATGTAATCTCCTGCTTCTTTCTGGTTCCCTCTGT
EY903840       --> GCACGTACCTTCTCC-ATGTAATCTCCTGCTTCTTTCTGGTTCCCTCTGT
FD536697       --> GCACGTACCTTCTCC-ATGTAATCTCCTGCTTCTTTCTGGTTCCCTCTGT
FD546684       --> GCACGTACCTTCTCC-ATGTAATCTCCTGCTTCTTTCTGGTTCCCTCTGT
FD968689       --> GCACGTACCTTCTCC-ATGTAATCTCCTGCTTCTTTCTGGTTCCCTCTGT
FD537353       --> GCACGTACCTTCTCC-ATGTAATCTCCTGCTTCTTTCTGGTTCCCTCTGT
FD539970       --> GCACGTACCTTCTCA-ATGTAATCTCCTGCTTCTTTCTGGTTCCCTCTGT
EV544077       --> GCACGTACCTTCTCC-ATGTAATCTCCTGCTTCTTTCTGGTTCCCTCTGT
EV570587       --> GCACGCACCTTCTCC-ATGTAATCTCCTGCTTCTTTCTGGTTCCCTCTGT
EV570588       --> GCACGCACCTTCTCC-ATGTAATCTCCTGCTTCTTTCTGGTTCCCTCTGT
EY895229       --> GCACGTACCTTCTCC-ATGTAATCTCCTGCTTCTTTCTGGTTCCCTCTGT
EV542523       --> GCACGTACCTTCTCC-ATGTAATCTCCTGCTTCTTTCTGGTTCCCTCTGT

               301    -    351
UN15969        --> ATGCATTAGCTATGTTTTCATCAAGAAGAGTCAACAGAGATCTGTTGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564760       <-- ATGCATTAGCTATGTTTTCATCAAGAAGAGTCAACAAAGATCTGTTGATC  Raphanus sativus var. oleiformis
EV535919       <-- ATGCATTAGCTATGTTTTCATCAAGAAGAGTCAACAGAGATCTGTTGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD550771       <-- ATGCGTTAGCTATGTTTTCATCAAGAAGAGTCAACAGAGATCTGTTGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548402       <-- ATGCATTAGCTATGTTTTCATCAAGAAGAGTCAACAAAGATCTGTTGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV549483       <-- ATGCATTAGCTATGTTTTCATCAAGAAGAGTCAACAAAGATCTGTTGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD950085       <-- ATGCATTAGCTATGTTTTCATCAAGAAGAGTCAACAAAGATCTGTTGATC  Raphanus sativus cv Early Scarlet Globe
EV536488       <-- ATGCATTAGCTATGTTTTCATCAAGAAGAGTCAACAGAGATCTGTTGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954261       <-- ATGCATTAGCTATGTTTTCATCAAGAAGAGTCAACAAAGATCTGTTGATC  Raphanus sativus cv Rat-Tail Radish #3870
FD540957       <-- ATGCATTAGCTATGTTTTCATCAAGAAGAGTCAACAGAGATCTGTTGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY915200       <-- ATGCATTAGCTATGTTTTCATCAAGAAGAGTCAACAAAGATCTGTTGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908068       <-- ATGCATTAGCTATGTTTTCATCAAGAAGAGTCAACAGAGATCTGTTGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544335       <-- ATGCATTAGCTATGTTTTCATCAAGAAGAGTCAACAGAGATCTGTTGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538538       <-- ATGCATTAGCTATGTTTTCATCAAGAAGAGTCAACAGAGATCTGTTGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535365       <-- ATGCATTAGCTATGTTTTCATCAAGAAGAGTCAACAGAGATCTGTTGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538737       <-- ATGCATTAGCTATGTTTTCATCAAGAAGAGTCAACAGAGATCTGTTGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549461       <-- ATGCATTAGCTATGTTTTCATCAAGAAGAGTCAACAAAGATCTGTTGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544086       <-- ATGCATTAGCTATGTTTTCATCAAGAAGAGTCAACAGAGATCTGTTGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD939067       <-- ATGCATTAGCTATGTTTTCATCAAGAAGAGTCAACAAAGATCTGTTGATC  Raphanus sativus var. oleiformis
EY946656       <-- ATGCATTAGCTATGTTTTCATCAAGAAGAGTCAACAAAGATCTGTTGATC  Raphanus sativus cv Rat-Tail Radish #3870
EX766127       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD972890       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540133       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539767       --> ATGCATTAGCTATGTTTTCATCAAGAAGAGTCAACAGAGATCTGTTGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752928       --> ATGCATTAGCTATGTTTTCATCAAGAAGAGTTAACAAAGATCTGTTGATC  Raphanus raphanistrum subsp. maritimus
EV540924       --> ATGCATTAGCTATGTTTTCATCAAGAAGAGTCAACAGAGATCTGTTGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540068       --> ATGCATTAGCTATGTTTTCATCAAGAAGAGTCAACAGAGATCTGTTGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540482       --> ATGCATTAGCTATGTTTTCATCAAGAAGAGTCAACAGAGATCTGTTGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542679       --> ATGCATTAGCTATGTTTTCATCAAGAAGAGTCAACAGAGATCTGTTGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX769813       --> ATGCGTTAGCTATGTTTTCATCAAGAAGAGTCAACAGAGATCTGTTGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY903840       --> ATGCATTAGCTATGTTTTCATCAAGAAGAGTCAACAGAGATCTGTTGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536697       --> ATGCATTAGCTATGTTTTCATCAAGAAGAGTCAACAGAGATCTGTTGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD546684       --> ATGCGTTAGCTATGTTTTCATCAAGAAGAGTCAACAGAGATCTGTTGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD968689       --> ATGCATTAGCTATGTTTTCATCAAGAAGAGTCAACAGAGATCTGTTGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537353       --> ATGCATTAGCTATGTTTTCATCAAGAAGAGTCAACAGAGATCTGTTGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539970       --> ATGCATTAGCTATGTTTTCATCAAGAAGAGTCAACAGAGATCTGTTGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV544077       --> ATGCATTAGCTATGTTTTCATCAAGAAGAGTCAACAAAGATCTGTTGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570587       --> ATGCATTAGCTATGTTTTCATCAAGAAGAGTTAACAAAGATCTGTTGATC  Raphanus raphanistrum subsp. landra
EV570588       --> ATGCATTAGCTATGTTTTCATCAAGAAGAGTTAACAAAGATCTGTTGATC  Raphanus raphanistrum subsp. landra
EY895229       --> ATGCATTAGCTATGTTTTCATCAAGAAGAGTTAACAAAGATCTGTTGATC  Raphanus raphanistrum subsp. maritimus
EV542523       --> ATGCATTAGCTATGTTTTCATCAAGAAGAGTCAACAGAGATCTGTTGATC  Raphanus raphanistrum subsp. raphanistrum (MS)

               351    -    401
UN15969        --> TCGTTTTTCTCCACCATATCCAACAATGTTGCTTTGATATCGGTTGAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564760       <-- TCGTTTTTCTCCACCATATCCAACAATGTTGCTTTGATATCGGTTGAGGT
EV535919       <-- TCGTTTTTCTCCACCATATCCAACAATGTTGCTTTGATATCGGTTGAGGT
FD550771       <-- TCGTTTTTCTCCACCATATCCAACAATGTTGCTTTGATATCGGTTGAGGT
EV548402       <-- TCGTTTTTCTCCACCATATCCAACAATGTTGCTTTGATATCGGTTGAGGT
EV549483       <-- TCGTTTTTCTCCACCATATCCAACAATGTTGCTTTGATATCGGTTGAGGT
FD950085       <-- TCGTTTTTCTCCACCATATCCAACAATGTTGCTTTGATATCGGTTGAGGT
EV536488       <-- TCGTTTTTCTCCACCATATCCAACAATGTTGCTTTGATATCGGTTGAGGT
FD954261       <-- TCGTTTTTCTCCACCATATCCAACAATGTTGCTTTGATATCGGTTGAGGT
FD540957       <-- TCGTTTTTCTCCACCATATCCAACAATGTTGCTTTGATATCGGTTGAGGT
EY915200       <-- TCGTTTTTCTCCACCATATCCAACAATGTTGCTTTGATATCGGTTGAGGT
EY908068       <-- TCGTTTTTCTCCACCATATCCAACAATGTTGCTTTGATATCGGTTGAGGT
FD544335       <-- TCGTTTTTCTCCACCATATCCAACAATGTTGCTTTGATATCGGTTGAGGT
EV538538       <-- TCGTTTTTCTCCACCATATCCAACAATGTTGCTTTGATATCGGTTGAGGT
EV535365       <-- TCGTTTTTCTCCACCATATCCAACAATGTTGCTTTGATATCGGTTGAGGT
EV538737       <-- TCGTTTTTCTCCACCA--TCCAACAATGTTGCTTTGATATCGGTTGAGGT
EV549461       <-- TCGTTTTTCTCCACCATATCCAACAATGTTGCTTTGATATCGGTTGAGGT
FD544086       <-- TCGTTTTTCTCCACCATATCCAACAATGTTGCTTTGATATCGGTTGAGGT
FD939067       <-- TCGTTTTTCTCCACCATATCCAACAATGTTGCTTTGATATCGGTTGAGGT
EY946656       <-- TCGTTTTTCTCCACCATATCCAACAATGTTGCTTTGATATCGGTTGAGGT
EX766127       <-- ...TTTTTCTCCACCATATCCAACAATGTTGCTTTGATATCGGTTGAGGT
FD972890       <-- ..................................................
FD540133       <-- ..................................................
FD539767       --> TCGTTTTTCTCCACCATATCCAACAATGTTGCTTTGATATCGGTTGAGGT
EX752928       --> TCGTTTTTCTCCACCATATCCAACAATGTTGCTTTGATATCGGTTGAGGT
EV540924       --> TCGTTTTTCTCCACCATATCCAACAATGTTGCTTTGATATCGGTTGAGGT
EV540068       --> TCGTTTTTCTCCACCATATCCAACAATGTTGCTTTGATATCGGTTGAGGT
EV540482       --> TCGTTTTTCTCCACCATATCCAACAATGTTGCTTTGATATCGGTTGAGGT
EV542679       --> TCGTTTTTCTCCACCAT--CCAACAATGTTGCTTTGATATCGGTTGAGGT
EX769813       --> TCGTTTTTCTCCACCATATCCAACAATGTTGCTTTGATATCGGTTGAGGT
EY903840       --> TCGTTTTTCTCCACCATATCCAACAATGTTGCTTTGATATCGGTTGAGGT
FD536697       --> TCGTTTTTCTCCACCATATCCAACAATGTTGCTTTGATATCGGTTGAGGT
FD546684       --> TCGTTTTTCTCCACCATATCCAACAATGTTGCTTTGATATCGGTTGAGGT
FD968689       --> T-GTTTTTCTCCACCATATCCAACAATGTTGCTTTGATATCGGTTGAGGT
FD537353       --> TCGTTTTTCTCCACCATATCCAACAATGTTGCTTTGATATCGGTTGAGGT
FD539970       --> TCGTTTTTCTCCACCATATCCAACAATGTTGCTTTGATATCGGTTGAGGT
EV544077       --> TCGTTTTTCTCCACCATATCCAACAATGTTGCTTTGATATCGGTTGAGGT
EV570587       --> TCGTTTTTCTCCACCATATCCAACAATGTTGCTTTGATATCGGTTGAGGT
EV570588       --> TCGTTTTTCTCCACCATATCCAACAATGTTGCTTTGATATCGGTTGAGGT
EY895229       --> TCGTTTTTCTCCACCATATCCAACAATGTTGCTTTGATATCGGTTGAGGT
EV542523       --> TCGTTTTTCTCCACCATATCCAACAATGTTGCTTTGATATCGGTTGAGGT

               401    -    451
UN15969        --> TAAGATCTTGGTTAAGCTATTTGTAGCCGTCATAAGCTCCTTTTGCATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564760       <-- TAAGATCTTGGTTAAGCTATTTGTAGCCGTCATAAGCTCCTTTTGCATTT
EV535919       <-- TAAGATCTTGGTTAAGCTATTTGTAGCCGTCATAAGCTCCTTTTGCATTT
FD550771       <-- TAAGATTTTTGTTAAGCTATTTGTAGCCGTCATAAGCTCCTTTTGCATTT
EV548402       <-- TAAGATCTTGGTTAAGCTATTTGTAGCCGTCATAAGCTCCTTGTGCATTT
EV549483       <-- TAAGATCTTGGTTAAGCTATTTGTAGCCGTCATAAGCTCCTTTTGCATTT
FD950085       <-- TAAGATCTTGGTTAAGCTATTTGTAGCCGTCATAAGCTCCTTTTGCATTT
EV536488       <-- TAAGATCTTGGTTAAGCTATTTGTAGCCGTCATAAGCTCCTTTTGCATTT
FD954261       <-- TAAGATCTTGGTTAAGCTATTTGTAGCCGTCATAAGCTCCTTTTGCATTT
FD540957       <-- TAAGATCTTGGTTAAGCTATTTGTAGCCGTCATAAGCTCCTTTTGCATTT
EY915200       <-- TAAGATCTTGGTTAAGCTATTTGTAGCCGTCATAAGCTCCTTTTGCATTT
EY908068       <-- TAAGATCTTGGTTAAGCTATTTGTAGCCGTCATAAGCTCCTTTTGCATTT
FD544335       <-- TAAGATCTTGGTTAAGCTATTTGTAGCCGTCATAAGCTCCTTTTGCATTT
EV538538       <-- TAAGATCTTGGTTAAGCTATTTGTAGCCGTCATAAGCTCCTTTTGCATTT
EV535365       <-- TAAGATCTTGGTTAAGCTATTTGTAGCCGTCATAAGCTCCTTTTGCATTT
EV538737       <-- TAAGATCTTGGTTAAGCTATTTGTAGCCGTCATAAGCTCCTTTTGCATTT
EV549461       <-- TAAGATCTTGGTTAAGCTATTTGTAGCCGTCATAAGCTCCTTTTGCATTT
FD544086       <-- TAAGATCTTGGTTAAGCTATTTGTAGCCGTCATAAGCTCCTTTTGCATTT
FD939067       <-- TAAGATCTTGGTTAAGCTATTTGTAGCCGTCATAAGCTCCTTTTGCATTT
EY946656       <-- TAAGATCTTGGTTAAGCTATTTGTAGCCGTCATAAGCTCCTTTTGCATTT
EX766127       <-- TAAGATTTTTGTTAAGCTATTTGTAGCCGTCATAAGCTCCTTTTGCATTT
FD972890       <-- ...........................................TGCATTT
FD540133       <-- ..................................................
FD539767       --> TAAGATCTTGGTTAAGCTATTTGTAGCCGTCATAAGCTCCTTTTGCATTT
EX752928       --> TAAGATCTTGGTTAAGCTATTTGTAGCCGTCATAAGCTCCTTTTGCATTT
EV540924       --> TAAGATCTTGGTTAAGCTATTTGTAGCCGTCATAAGCTCCTTTTGCATTT
EV540068       --> TAAGATCTTGGTTAAGCTATTTGTAGCCGTCATAAGCTCCTTTTGCATTT
EV540482       --> TAAGATCTTGGTTAAGCTATTTGTAGCCGTCATAAGCTCCTTTTGCATTT
EV542679       --> TAAGATCTTGGTTAAGCTATTTGTAGCCGTCATAAGCTCCTTTTGCATTT
EX769813       --> TAAGATTTTTGTTAAGCTATTTGTAGCCGTCATAAGCTCCTTTTGCATTT
EY903840       --> TAAGATCTTGGTTAAGCTATTTGTAGCCGTCATAAGCTCCTTTTGCATTT
FD536697       --> TAAGATCTTGGTTAAGCTATTTGTAGCCGTCATAAGCTCCTTTTGCATTT
FD546684       --> TAAGATTTTTGTTAAGCTATTTGTAGCCGTCATAAGCTCCTTTTGCATTT
FD968689       --> TAAGACCTTGGTTAAGCTATTTG...........................
FD537353       --> TAAGATCTTGGTTAAGCTATTTGTAGCCGTCATAAGCTCCTTTTGCATTT
FD539970       --> TAAGATCTTGGTTAAGCTATTTGTAGCCGTCATAAGCTCCTTTTGCATTT
EV544077       --> TAAGATCTTGGTTAAGCTATTTGTAGCCGTCATAAGCTCCTTGTGCATTT
EV570587       --> TAAAATCTTGGTTAAGCTATTTGTAGCCGTCATAAGCTCCTTTTGCATTT
EV570588       --> TAAGATCTTGGTTAAGCTATTTGTAGCCGTCATAAGCTCCTTTTGCATTT
EY895229       --> TAAGATCTTGGTTAAGCTATTTGTAGCCGTCATAAGCTCCTTTTGCATTT
EV542523       --> TAAGATCTTGGTTAAGCTATTTGTAGCCGTCATAAGCTCCTTTTGCATTT

               451    -    501
UN15969        --> TGTCATAAGCCTCAATTCCTTCTTCTAAGGCTTTCTGAAGTGATTCAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564760       <-- TGTCATAAGCCTCAATTCCTTCTTCTAAGGCCTTCTGAAGTGATTCAAGC  Raphanus sativus var. oleiformis
EV535919       <-- TGTCATAAGCCTCAATTCCTTCTTCTAAGGCTTTCTGAAGTGATTCAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD550771       <-- TGTCATAAGCCTCAATTCCTTCTTCTAAGGCCTTCTGAAGTGATTCAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548402       <-- TGTCATAAGCCTCAATTCCTTCTTCTAAGGCCTTCTGAAGTGATTCAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV549483       <-- TGTCATAAGCCTCAATTCCTTCTTCTAAGGCCTCCTGAAGTGATTCAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD950085       <-- TGTCATAAGCCTCAATTCCTTCTTCTAAGGCCTTCTGAAGTGATTCAAGC  Raphanus sativus cv Early Scarlet Globe
EV536488       <-- TGTCATAAGCCTCAATTCCTTCTTCTAAGGCTTTCTGAAGTGATTCAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD954261       <-- TGTCATAAGCCTCAATTCCTTCTTCTAAGGCCTTCTGAAGTGATTCAAGC  Raphanus sativus cv Rat-Tail Radish #3870
FD540957       <-- TGTCATAAGCCTCAATTCCTTCTTCTAAGGCTTTCTGAAGTGATTCAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY915200       <-- TGTCATAAGCCTCAATTCCTTCTTCCAAGGCCTTCTGAAGTGATTCAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY908068       <-- TGTCATAAGCCTCAATTCCTTCTTCTAAGGCTTTCTGAAGTGATTCAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD544335       <-- TGTCATAAGCCTCAGTTCCTTCTTCTAAGGCTTTCTGAAGTGATTCAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538538       <-- TGGCATAAGCCTCAATTCCTTCTTCTAAGGCTTTCTGAAGTGATTCAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535365       <-- TGTCATAAGTCTCAATTCCTTCTTCTAAGGCTTTCTGAAGTGATTCAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV538737       <-- TGTCATAAGCCTCAATTCCTTCTTCTAAGGCTTTCTGAAGTGATTCAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV549461       <-- TGTCATAAGCCTCAATTCCTTCTTCTAAGGCCTCCTGAAGTGATTCAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544086       <-- TGTCATTAGCCTCAGTTCCTTCTTCTAAGGCTTTCTGAAGTGATTCAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD939067       <-- TGTCATAAGCCTCAATTCCTTCTTCTAAGGCCTTCTGAAGTGATTCAAGC  Raphanus sativus var. oleiformis
EY946656       <-- TGTCATAAGCCTCAATTCCTTCTTCTAAGGCCTTCTGAAGTGATTCAAGC  Raphanus sativus cv Rat-Tail Radish #3870
EX766127       <-- TGTCATAAGCCTCAATTCCTTCTTCTAAGGCCTTCTGAAGTGATTCAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD972890       <-- TGTCATAAGCCTCAATTCCTTCTTCTAAGGCTTTCTGAAGTGATTCAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540133       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539767       --> TGTCATTAGCCTCAGTTCCTTCTTCTAAGGCTTTCTGAAGTGATTCAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX752928       --> TGTCATAAGCCTCAATTCCTTCTTCTAAGGCTTTCTGAAGTGATTCAAGC  Raphanus raphanistrum subsp. maritimus
EV540924       --> TGTCATAAGCCTCAATTCCTTCTTCTAAGGCTTTCTGAAGTGATTCAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540068       --> TGTCATAAGTCTCAATTCCTTCTTCTAAGGCTTTCTGAAGTGATTCAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV540482       --> TGTCATAAGCCTCAATTCCTTCTTCTAAGGCTTTCTGAAGTGATTCAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV542679       --> TGTCATAAGCCTCAATTCCTTCTTCTAAGGCTTTCTGAAGTGATTCAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX769813       --> TGTCATAAGCCTCAATTCCTTCTTCTAAGGCCTTCTGAAGTGATTCAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY903840       --> TGTCATAAGCCTCAATTCCTTCTTCTAAGGCTTTCTGAAGTGATTCAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536697       --> TGTCATAAGCCTCAATTCCTTCTTCTAAGGCTTTCTGAAGTGATTCAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD546684       --> TGTCATAAGCCTCAATTCCTTCTTCTAAGGCCTTCTGAAGTGATTCAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD968689       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537353       --> TGTCATAAGCCTCAATTCCTTCTTCTAAGGCTTTCTGAAGTGATTCAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539970       --> TGTCATAAGCCTCAGTTCCTTCTTCTAAGGGTTTCTGAAGTGATTCAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV544077       --> TGTCATAAGCCTCAATTCCTTCTTCTAAGGCCTTCTGAAGTGATTCAAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV570587       --> TGTCATAAGCCTCAATTCCTTCTTCTAAGGCTTTCTGAAGTGATTCAAGC  Raphanus raphanistrum subsp. landra
EV570588       --> TGTCATAAGCCTCAATTCCTTCTTCTAAGGCTTTCTGAAGTGATTCAAGC  Raphanus raphanistrum subsp. landra
EY895229       --> TGTCATAAGCCTCAATTCCTTCTTCTAAGGCTTTCTGAAGTGATTCAAGC  Raphanus raphanistrum subsp. maritimus
EV542523       --> TGGCATAAGCCTCAATTCCTTCTTCTAAGGCTTTCTGAAGTGATTCAAGC  Raphanus raphanistrum subsp. raphanistrum (MS)

               501    -    551
UN15969        --> TCAATCAATCTGTCTTCATCTTCCGCGGTTTTTGTAACAGCAAACCGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564760       <-- TCAATCAATCTGTCTTCATCTTCCGCGGTTTTTGTAACAGCAAACCGGAT
EV535919       <-- TCAATCAATCTGTCTTCATCTTCCGCGGTTTTTGTAACAGCAAACCGGAT
FD550771       <-- TCAATCAATCTGTCTTCATCTTCCGCGGTTTTTGTAACAGCAAACCGGAT
EV548402       <-- TCAATCAATCTGTCTTCATCTTCCGCGGTTTTTGTAACAGCAAACCGGAT
EV549483       <-- TCAATCAATCTGTCTTCATCTTCCGCGGTTTTTGTAACAGCAAACCGGAT
FD950085       <-- TCAATCAATCTGTCTTCATCTTCCGCGGTTTTTGTAACAGCAAACCGGAT
EV536488       <-- TCAATCAATCTGTCTTCATCTTCCGCGGTTTTTGTAACAGCAAACCGGAT
FD954261       <-- TCAATCAATCTGTCTTCATCTTCCGCGGTTTTTGTAACAGCAAACCGGAT
FD540957       <-- TCAATCAATCTGTCTTCATCTTCCGCGGTTTTTGTAACGGCAAACCGGAT
EY915200       <-- TCAATCAATCTGTCTTCATCTTCCGCGGTTTTTGTAACAGCAA-CCGGAT
EY908068       <-- TCAATCAATCTGTCTTCATCTTCCGCGGTTTTTGTAACAGCAAACCGGAT
FD544335       <-- TCAATCAATCTGTCTTCATCTTCCGCGGTTTTTGTAACAGCAAACCGGAT
EV538538       <-- TCAATCAATCTGTCTTCATCTTCCGCGGTTTTTGTAACAGCAAACCGGAT
EV535365       <-- TCAATCAATCTGTCTTCATCTTCCGCGGTTTTTGTAACAGCAAACCGGAT
EV538737       <-- TCAATCAATCTGTCTTAATCTTCCGCGGTTTTTGTAACAGCAAACCGGAT
EV549461       <-- TCAATCAATCTGTCTTCATCTTCCGCGGTTTTTGTAACAGCAAACCGGAT
FD544086       <-- TCAATCAATCTGTCTTCATCTTCCGCGGTTTTTGTAACAGCAAACCGGAT
FD939067       <-- TCAATCAATCTGTCTTCATCTTCCGCGGTTTTTGTAACAGCAAACCGGAT
EY946656       <-- TCAATCAATCTGTCTTCATCTTCCGCGGTTTTTGTAACAGCAAACCAGAT
EX766127       <-- TCAATCAATCTGTCTTCATCTTCCGCGGTTTTTGTAACAGCAAACCGGAT
FD972890       <-- TCAATCAATCTGTCTTCATCTTCCGCGGTTTTTGTAACAGCAAACCGGAT
FD540133       <-- ..................................................
FD539767       --> TCAATCAATCTGTCTTCATCTTCCGCGGTTTTTGTAACAGCAAACCGGAT
EX752928       --> CCAATCAATCTGTCTTCATCTTCCGCGGTTTTTGCAACAGCAAACCGGAT
EV540924       --> TCAATCAATCTGTCTTCATCTTCCGCGGTTTTTGTAACAGCAAACCGGAT
EV540068       --> TCAATCAATCTGTCTTCATCTTCCGCGGTTTTTGTAACAGCAAACCGGAT
EV540482       --> TCAATCAATCTGTCTTCATCTTCCGCGGTTTTTGTAACAGCAAACCGGAT
EV542679       --> TCAATCAATCTGTCTTAATCTTCCGCGGTTTTTGTAACAGCAAACCGGAT
EX769813       --> TCAATCAATCTGTCTTCATCTTCCGCGGTTTTTGTAACAGCAAACCGGAT
EY903840       --> TCAATCAATCTGTCTTCATCTTCCGCGGTTTTTGTAACAGCAAACCGGAT
FD536697       --> TCAATCAATCTGTCTTCATCTTCCGCGGTTTTTGTAACAGCAAACCGGAT
FD546684       --> TCAATCAATCTGTCTTCATCTTCCGCGGTTTTTGTAACAGCAAACCGGAT
FD968689       --> ..................................................
FD537353       --> TCAATCAATCTGTCTTCATCTTCCGCGGTTTTTGTAACGGCAAACCGGAT
FD539970       --> TCAATCAATCTGTCTTCATCTTCCGCGGTTTTTGTAACAGCAAACCGGAT
EV544077       --> TCAATCAATCTGTCTTCATCTTCCGCGGTTTTTGTAACAGCAAACCGGAT
EV570587       --> TCAATCAATCTGTCTTCATCTTCCGCGGTTTTTGTAACAGCAAACCGGAT
EV570588       --> TCAATCAATCTGTCTTCATCTTCCGCGGTTTTTGTAACAGCAAACCGGAT
EY895229       --> TCAATCAATCTGTCTTCATCTTCCGCGGTTTTTGTAACAGCAAACCGGAT
EV542523       --> TCAATCAATCTGTCTTCATCTTCCGCGGTTTTTGTAACAGCAAACCGGAT

               551    -    601
UN15969        --> TTGCCCGATTTCAAGTCGAATTTGCGCAAAAAACTCGTCGTTTAACCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564760       <-- TTGCCCGATTTCAAGTCGAATTTGCGCAAAAAACTCGTCGTTTAACCTTC
EV535919       <-- TTGCCCGATTTCAAGTCGAATTTGCGCAAAAAATTCGTCGTTTAACCTTC
FD550771       <-- TTGCCCGATTTCAAGTCGAATTTGCGCAAAAAACTCGTCGTTTAACCTTC
EV548402       <-- TTGCCCGATTTCAAGTCGAATTTGCGCAAAAAACTCGTCGTTTAACCTTC
EV549483       <-- TTGCCCGATTTCAAGTCGAATTTGCGCAAAAAACTCGTCGTTTAACCTTC
FD950085       <-- TTGCCCGATTTCAAGTCGAATTTGCGCAAAAAACTCGTCGTTTAACCTTC
EV536488       <-- TTGCCCGATTTCAAGTCGAATTTGCGCAAAAAATTCGTCGTTTAACCTTC
FD954261       <-- TTGCCCGATTTCAAGTCGAATTTGCGCAAAAAACTCGTCGTTTAACCTTC
FD540957       <-- TTGCCCGATTTCAAGTCGAATTTGCGCAAAAAATTCGTCGTTTAACCTTC
EY915200       <-- TTGCCCGATTTCAAGTCGAATTTGCGCAAAAAACTCGTCGTTTAACCTTC
EY908068       <-- TTGCCCGATTTCAAGTCGAATTTGCGCAAAAAATTCGTCGTTTAACCTTC
FD544335       <-- TTGCCCGATTTCAAGTCGAATTTGCGCAAAAAACTCGTCGTTTAACCTTC
EV538538       <-- TTGCCCGATTTCAAGTCGAATTTGCGCAAAAAATTCGTCGTTTAACCTTC
EV535365       <-- TTGCCCGATTTCAAGTCGAATTTGCGCAAAAAATTCGTCGTTTAACCTTC
EV538737       <-- TTGCCCGATTTCAAGTCGAATTTGCGCAAAAAATTCGTCGTTTAACCTTC
EV549461       <-- TTGCCCGATTTCAAGTCGAATTTGCGCAAAAAACTCGTCGTTTAACCTTC
FD544086       <-- TTGCCCGATTTCAAGTCGAATTTGCGCAAAAAACTCGTCGTTTAACCTTC
FD939067       <-- TTGCCCGATTTCAAGTCGAATTTGCGCAAAAAACTCGTCGTTTAACCTTC
EY946656       <-- TTGCCCGATTTCAAGTCGAATTTGCGCAAAAAACTCGTCGTTTAACCTTC
EX766127       <-- TTGCCCGATTTCAAGTCGAATTTGCGCAAAAAACTCGTCGTTTAACCTTC
FD972890       <-- TTGGCCGATTTCAAGTCGAATTTGCGCAAAAAATTCGTCGTTTAACCTTC
FD540133       <-- ..................................................
FD539767       --> TTGCCCGATTTCAAGTCGAATTTGCGCAAAAAACTCGTCGTTTAACCTTC
EX752928       --> TTGCCCGATTTCAAGTCGAATTTGCGCAAAAAACTCGTCGTTTAACCTTC
EV540924       --> TTGCCCGATTTCAAGTCGAATTTGCGCAAAAAATTCGTCGTTTAACCTTC
EV540068       --> TTGCCCGATTTCAAGTCGAATTTGCGCAAAAAATTCGTCGTTTAACCTTC
EV540482       --> TTGCCCGATTTCAAGTCGAATTTGCGCAAAAAATTCGTCGTTTAACCTTC
EV542679       --> TTGCCCGATTTCAAGTCGAATTTGCGCAAAAAATTCGTCGTTTAACCTTC
EX769813       --> TTGCCCGATTTCAAGTCGAATTTGCGCAAAAAACTCGTCGTTTAACCTTC
EY903840       --> TTGCCCGATTTCAAGTCGAATTTGCGCAAAAAA.................
FD536697       --> TTGCCCGATTTCAAGTCGAATTTGCGCAAAAAATTCGTCGTTTAACCTTC
FD546684       --> TTGCCCGATTTCAAGTCGAATTTGCGCAAAAAACTCGTCGTTTAACCTTC
FD968689       --> ..................................................
FD537353       --> TTGCCCGATTTCAAGTCGAATTTGCGCAAAAAATTCGTCGTTTAACCTTC
FD539970       --> TTGCCCGATTTCAAGTCGAATTTGCGCAAAAAACTCGTCGTTTAACCTTC
EV544077       --> TTGCCCGATTTCAAGTCGAATTTGCGCAAAAAACTCGTCGTTTAACCTTC
EV570587       --> TTGCCCGATTTCAAGTCGAATTTGTGCAAAAAACTCGTCGTTTAACCTTC
EV570588       --> TTGCCCGATTTCAAGTCGAATTTGTGCAAAAAACTCGTCGTTTAACCTTC
EY895229       --> TTGCCCGATTTCAAGTCGAATTTGCGCAAAAAACTCGTCGTTTAACCTTC
EV542523       --> TTGCCCGATTTCAAGTCGAATTTGCGCAAAAAATTCGTCGTTTAACCTTC

               601    -    651
UN15969        --> CACGAAGCCTAGCGATTTCGAATTCAATCTCCTGAGCTTCCGTGTCAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564760       <-- CACGAAGCCTAGCGATTTCGAATTCAATCTCCTGAGCTTCCGTGTCAAGA
EV535919       <-- CACGAAGCCTAGCGATTTCGAATTCAATCTCCTGAGCTTCCGTGTCAAGA
FD550771       <-- CACGAAGCCTAGCGATTTCGAATTCAATCTCCTGAGCTTCCGTGTCAAGA
EV548402       <-- CACGAAGCCTAGCGATTTCGAATTCAATCTCCTGAGCTTCCGTGTCAAGA
EV549483       <-- CACGAAGCCTAGCGATTTCGAATTCAATCTCCTGAGCTTCCGTGTCAAGA
FD950085       <-- CACGAAGCCTAGCGATTTCGAATTCAATCTCCTGAGCTTCCGTGTCAAGA
EV536488       <-- CACGAAGCCTAGCGATTTCGAATTCAATCTCCTGAGCTTCCGTGTCAAGA
FD954261       <-- CACGAAGCCTAGCGATTTCGAATTCAATCTCCTGAGCTTCCGTGTCGAGA
FD540957       <-- CACGAAGCCTAGCGATTTCGAATTCAATCTCCTGAGCTTCCGTGTCAAGA
EY915200       <-- CACGAAGCCTAGCGATTTTGAATTCAATCTCCTGAGCTTCCGTGTCAAGA
EY908068       <-- CACGAAGCCTAGCGATTTCGAATTCAATCTCCTGAGCTTCCGTGTCAAGA
FD544335       <-- CACGAAGCCTAGCGATTTCGAATTCAATCTCCTGAGCTTCAGTGTCAAGA
EV538538       <-- CACGAAGCCTAGCGATTTCGAATTCAATCTCCTGAGCTTCCGTGTCAAGA
EV535365       <-- CACGAAGCCTAGCGATTTCGAATTCAATCTCCTGAGCTTCCGTGTCAAGA
EV538737       <-- CACGAAGCCTAGCGATTTCGAATTCAATCTCCTGAGCTTCCGTGTCAAGA
EV549461       <-- CACGAAGCCTAGCGATTTCGAATTCAATCTCCTGAGCTTCCGTGTCAAGA
FD544086       <-- CACGAAGCCTAGCGATTTCGAATTCAATCTCCTGAGCTTCAGTGTCAAGA
FD939067       <-- CACGAAGCCTAGCGATTTCGAATTCAATCTCCTGAGCTTCCGTGTCAAGA
EY946656       <-- CACGAAGCCTAGCGATTTCGAATTCAATCTCCTGAGCCTCCGTGTCAAGA
EX766127       <-- CACGAAGCCTAGCGATTTCGAATTCAATCTCCTGAGCTTCCGTGTCAAGA
FD972890       <-- CACGAAGCCTAGCGATTTCAAATTCAATCTCCTGAGCTTCCGTGTCAAGA
FD540133       <-- ..................................................
FD539767       --> CACGAAGCCTAGCGATTTCGAATTCAATCTCCTGAGCTTCAGTGTCAAGA
EX752928       --> CACGAAGCCTAGCGATTTCGAATTCAATCTCCTGAGCTTCCGTGTCAAGA
EV540924       --> CACGAAGCCTAGCGATTTCGAATTCAATCTCCTGAGCTTCCGTGTCAAGA
EV540068       --> CACGAAGCCTAGCGATTTCGAATTCAATCTCCTGAGCTTCCGTGTCAAGA
EV540482       --> CACGAAGCCTAGCGATTTCGAATTCAATCTCCTGAGCTTCCGTGTCAAGA
EV542679       --> CACGAAGCCTAGCGATTTCGAATTCAATCTCCTGAGCTTCCGTGTCAAGA
EX769813       --> CACGAAGCCTAGCGATTTCGAATTCAATCTCCTGAGCTTCCGTGTCAAGA
EY903840       --> ..................................................
FD536697       --> CACGAAGCCTAGCGATTTCGAATTCAATCTCCTGAGCTTCCGTGTCAAGA
FD546684       --> CACGAAGCCTAGCGATTTCGAATTCAATCTCCTGAGCTTCCGTGTCAAGA
FD968689       --> ..................................................
FD537353       --> CACGAAGCCTAGCGATTTCGAATTCAATCTCCTGAGCTTCCGTGTCAAGA
FD539970       --> CACGAAGCCTAGCGATTTCGAATTCAATCTCCTGAGCTTCAGTGTCAAGA
EV544077       --> CACGAAGCCTAGCGATTTCGAATTCAATCTCCTGAGCTTCCGTGTCAAGA
EV570587       --> CACGAAGCCTAGCGATTTCGAATTCAATCTCCTGAGCTTCCGTGTCAAGA
EV570588       --> CACGAAGCCTAGCGATTTCGAATTCAATCTCCTGAGCTTCCGTGTCAAGA
EY895229       --> CACGAAGCCTAGCGATTTCGAATTCAATCTCCTGAGCTTCCGTGTCAAGA
EV542523       --> CACGAAGCCTAGCGATTTCGAATTCAATCTCCTGAGCTTCCGTGTCAAGA

               651    -    701
UN15969        --> AAGAACTCAATCAGCTCAGCGGAAGTATCTGGTACAACTCTAGACTCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564760       <-- AAGAACTCAATCAGCTCAGCGGAAGTATCTGGTACAACTCTAGACTCTCT
EV535919       <-- AAGAACTCAATCAGCTCAGCGGAAGTATCTGGTACAGCTCTAGACTCTCT
FD550771       <-- AAGAACCCAATCAGCTCAGCGGAAGTATCTGGTACAACTCTAGACTCTCA
EV548402       <-- AAGAACTCAATCAGCTCAGCGGAAGTATCTGGTACAACTCTAGACTCTCT
EV549483       <-- AAGAACTCAATCAGCTCAGCGGAAGTATCTGGTACAACTCTAGACTCTCT
FD950085       <-- AAGAACTCAATCAGCTCAGCGGAAGTATCTGGTACAACTCTAGACTCTCT
EV536488       <-- AAGAACTCAATCAGCTCAGCGGAAGTATCTGGTACAACTCTAGACTCTCT
FD954261       <-- AAGAACTCAATCAGCTCAGCGGAAGTATCTGGTACAACTCTAGACTCTCT
FD540957       <-- AAGAACTCAATCAGCTCAGCGGAAGTATCTGGTACAACTCTAGACTCTCT
EY915200       <-- AAGAACTCAATCAGCTCAGCGGAAGTATCTGGTACAACTCTAGACTCTCT
EY908068       <-- AAGAACTCAATCAGCTCAGCGGAAGTATCTGGTACAACTCTAGACTCTCT
FD544335       <-- AAGAACTCAATCAGCTCAGCGGAAGTATCTGGTACAACTCTAGACTCTCT
EV538538       <-- AAGAACTCAATCAGCTCAGCGGAAGTATCTGGTACAACTCTAGACTCTCT
EV535365       <-- AAGAACTCAATCAGCTCAGCGGAAGTATCTGGTACAACTCTAGACTCTCT
EV538737       <-- AAGAACTCAATCAGCTCAGCGGAAGTATCTGGTACAACTCTAGACTCTCT
EV549461       <-- AAGAACTCAATCAGCTCAGCGGAAGTATCTGGTACAACTCTAGACTCTCT
FD544086       <-- AAGAACTCAATCAGCTCAGCGGAAGTATCTGGTACAACTCTAGACTCTCT
FD939067       <-- AAGAACTCAATCAGCTCAGCGGAAGTATCTGGTACAACTCTAGACTCTCT
EY946656       <-- AAGAACTCAATCAGCTCAGCGGAAGTATCTGGTACAACTCTAGACTCTCT
EX766127       <-- AAGAACTCAATCAGCTCAGCGGAAGTATCTGGTACAACTCTAGACTCTCT
FD972890       <-- AAGAACTCAATCAGCTCAGCGGAAGTATCTGGTACAACTCTAGACTCTCT
FD540133       <-- ..................................................
FD539767       --> AAGAACTCAATCAGCTCAGCGGAAGTATCTGGTACAACTCTAGACTCTCT
EX752928       --> AAGAACTCAATCAGCTCAGCGGAAGTATCTGGTACAACTCTAGACTCTCT
EV540924       --> AAGAACTCAATCAGCTCAGCGGAAGTATCTGGTACAACTCTAGACTCTCT
EV540068       --> AAGAACTCAATCAGCTCAGCGGAAGTATCTGGTACAACTCTAGACTCTCT
EV540482       --> AAGAACTCAATCAGCTCAGCGGAAGTATCTGGTACAGCTCTAGACTCTCT
EV542679       --> AAGAACTCAATCAGCT..................................
EX769813       --> AAGAACTCAATCAGCTCAGCGGAAGTATCTGGTACAACTCTAGACTCTCT
EY903840       --> ..................................................
FD536697       --> AAGAACTCAATCAGCTCAGCGGAAGTATCTGGTACAACTCTAGACTCTCT
FD546684       --> AAGAACCCAATCAGCTCAGCGGAAGTATCTGGTACAACTCTAGACTCTCA
FD968689       --> ..................................................
FD537353       --> AAGAACTCAATCAGCTCAGCGGAAGTATCTGGTACAACTCTAGACTCTCT
FD539970       --> AAGAACTCAATCAGCTCAGCGGAAGTATCTGG..................
EV544077       --> AAGAACTCAATCAGCTCAGCGGAAGTATCTGGTACAACTCTAGACTCTCT
EV570587       --> AAGAACTCAATCAGCTCAGCGGAAGTATCTGGTACAACTCTAGACTCTCT
EV570588       --> AAGAACTCAATCAGCTCAGCGGAAGTATCTGGTACAACTCTAGACTCTCT
EY895229       --> AAGAACTCAATCAGCTCAGCGGAAGTATCTGGTACAACTCTAGACTCTCT
EV542523       --> AAGAACTCAATCAGCTCAGCGGAAGTATCTGGTACAACTCTAGACTCTCT

               701    -    751
UN15969        --> AAGAGCTTGACGACGCTCTCTCTCTTCACGGAGTTGTTTCTGGAAAGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564760       <-- AAGAGCTTGACGACGCTCTCTCTCTTCACGGAGTTGTTTCTGGAAAGCTT
EV535919       <-- AAGAGCTTGACGACGCTCTCTCTCTTCACGGAGTTGTTTCTGAAAAGCTT
FD550771       <-- AAGAGCTTGACGACGCTCTCTCTCTTCACGGAGTTGTTTCTGGAAAGCTT
EV548402       <-- AAGAGCTTGACGACGCTCTCTCTCTTCACGGAGTTGTTTCTGGAAAGCTT
EV549483       <-- AAGAGCTTGACGACGCTCTCTCTCTTCACGGAGTTGTTTCTGGAAAGCTT
FD950085       <-- AAGAGCTTGACGACGCTCTCTCTCTTCACGGAGTTGTTTCTGAAAAGCCT
EV536488       <-- AAGAGCTTGACGACGCTCTCTCTCTTCACGGAGTTGTTTCTGAAAAGCTT
FD954261       <-- AAGAGCTTGACGACGCTCTCTCTCTTCACGGAGTTGTTTCTGAAAAGCCT
FD540957       <-- AAGAGCTTGACGACGCTCTCTCCCTTCACGGAGTTGTTTCTGAAAAGCTT
EY915200       <-- AAGAGCTTGACGACGCTCTCTCTCTTCACGGAGTTGTTTCTGGAAAGCTT
EY908068       <-- AAGAGCTTGACGACGCTCTCTCTCTTCACGGAGTTGTTTCTGAAAAGCTT
FD544335       <-- AAGAGCTTGACGACGCTCTCTCTCTTCACGGAGTTGTTTCTGAAAAGCTT
EV538538       <-- AAGAGCTTGACGACGCTCTCTCTCTTCACGGAGTTGTTTCTGGAAAGCTT
EV535365       <-- AAGAGCTTGACGACGCTCTCTCTCTTCACGGAGTTGTTTCTGGAAAGCTT
EV538737       <-- AAGAGCTTGACGACGCTCTCTCTCTTCACGGAGTTGTTTCTGGAAAGCTT
EV549461       <-- AAGAGCTTGACGACGCTCTCTCTCTTCACGGAGTTGTTTCTGGAAAGCTT
FD544086       <-- AAGAGCTTGACGACGCTCTCTCTCTTCACGGAGTTGTTTCTGAAAAGCTT
FD939067       <-- AAGAGCTTGACGACGCTCTCTCTCTTCACGGAGTTGTTTCTGGAAAGCTT
EY946656       <-- AAGAGCTTGACGACGCTCTCTCTCTTCACGGAGTTGTTTCTGAAAAGCCT
EX766127       <-- AAGAGCTTGACGACGCTCTCTCTCTTCACGGAGTTGTTTCTGGAAAGCTT
FD972890       <-- AAGAGCTTGACGACGCTCTCTCTCTTCACGGAGTTGTTTCTGAAAAGCTT
FD540133       <-- ..................................................
FD539767       --> AAGAGCTTGACGACGCTCTCTCTCTTCACGGA..................
EX752928       --> AAGAGCTTGACGACGCTCTCTCTCTTCACGGAG.................
EV540924       --> AAGAGCTTGACGACGCTCTCTCTCTTCACGGAGTTGTTTCTGAAAAGCTT
EV540068       --> AAGAGCTTGACGACGCTCTCTCTCTTCACGGAGTTGTTTCTGGAAAGCTT
EV540482       --> AAGAGCTTGACGACGCTCTCTCTCTTCACGGAGTTGTTTCTGAAAAGCTT
EV542679       --> ..................................................
EX769813       --> AAGAGCTTGACGACGCTCTCTCTCTTCACGGAGTTGTTTCTGGAAAGCTT
EY903840       --> ..................................................
FD536697       --> AAGAGCCTGACGACGCTCTCTCTCTTCACGGAGTTGTTTCTGAAAAGCTT
FD546684       --> AAGAGCTTGACGACGCTCTCTCTCTTCACGGAGTTGTTTCTGGAAAGCTT
FD968689       --> ..................................................
FD537353       --> AAGAGCTTGACGACGCTCTCTCCCTTCACGGAGTTGTTTCTGAAAAGCTT
FD539970       --> ..................................................
EV544077       --> AAGAGCTTGACGACGCTCTCTCTCTTCACGGAGTTGTTTCTGGAAAGCTT
EV570587       --> AAGAGCTTGACGACGCTCTCTCTCTTCACGGAGTTGTTTCTGGAAAGCTT
EV570588       --> AAGAGCTTGACGACGCTCTCTCTCTTCACGGAGTTGTTTCTGGAAAGCTT
EY895229       --> AAGAGCTTGACGACGCTCTCTCTCTTCACGGAGTTGTTTCTGGAAAGCTT
EV542523       --> AAGAGCTTGACGACGCTCTCTCTCTTCACGGAGTTGTTTCTGGAAAGCTT

               751    -    801
UN15969        --> CTTTAGCCTCGGAGTCTCTCTCTATCCTGCGTTTGAACTCAAGACGAGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564760       <-- CTTTAGCCTCGGAGTCTCTCTCTATCCTGCGTTTGAACTCAAGACGAGCG
EV535919       <-- CTTTAGCCTCGGAGTCTCTCTCTATCCTGCGTTTGAACTCAAGACGAGCG
FD550771       <-- CTTTAGCCTCGGAGTCTCTCTCTATCCTGCGTTTGAACTCAAGACGAGCG
EV548402       <-- CTTTAGCCTCGGAGTCTCTCTCTATCCTG--CATGAACTCAAGACGAGCG
EV549483       <-- CTTTAGCCTCGGAGTCTCTCTCTATCCTGCGTTTGAACTCAAGACGAGCG
FD950085       <-- CTTTAGCCTCGGAGTCTCTCTCTATCCTGCGTTTGAACTCAAGACGAGCG
EV536488       <-- CTTTAGCCTCGGAGTCTCTCTCTATCCTGCGTTTGAACTCAAGACGAGCG
FD954261       <-- CTTTAGCCTCGGAGTCTCTCTCTATCCTGCGTTTGAACTCAAGACGAGCG
FD540957       <-- CTTTAGCCTCGGAGTCTCTCTCTATCCTGCGTTTGAACTCAAGACGAGCG
EY915200       <-- CTTTAGCCTCGGAGTCTCTCTCTATCCTGCGTTTGAACTCAAGACGAGCG
EY908068       <-- CTTTAGCCTCGGAGTCTCTCTCTATCCTGCGTTTGAACTCAAGACGAGCG
FD544335       <-- CTTTAGCCTCGGAGTCTCTCTCTATCCTGCGTTTGAACTCAAGACGAGCG
EV538538       <-- CTTTAGCCTCGGAGTCTCTCTCTATCCTGCGTTTGAACTCAAGACGAGCG
EV535365       <-- CTTTAGTCTCGGAGTCTCTCTCTATCCTGCGTTTGAACTCAAGACGAGCG
EV538737       <-- CTTTAGCCTCGGGGTCTCTCTCTATCCTGCGTTTGAACTCAAGACGAGCG
EV549461       <-- CTTTAGCCTCGGAGTCTCTCTCTATCCTGCGTTTGAACTCAAGACGAGCG
FD544086       <-- CTTTAGCCTCGGAGTCTCTCTCTATCCTGCGTTTGAACTCAAGACGAGCG
FD939067       <-- CTTTAGCCTCGGAGTCTCTCTCTATCCTGCGTTTGAACTCAAGACGAGCG
EY946656       <-- CTTTAGCCTCGGAGTCTCTCTCTATCCTGCGTTTGAACTCAAGACGAGCG
EX766127       <-- CTTTAGCCTCGGAGTCTCTCTCTATCCTGCGTTTGAACTCAAGACGAGCG
FD972890       <-- CTTTAGCCTCGGAGTCTCTCTCTATCCTGCGTTTGAACTCAAGACGAGCG
FD540133       <-- ..................................................
FD539767       --> ..................................................
EX752928       --> ..................................................
EV540924       --> CTTTAGCCT.........................................
EV540068       --> CTTTAGTCTCGGAGTCTCTCTCTATCCTGCGTTTGAACTCAAGACGAGCG
EV540482       --> CTTTAGCCTCGGAGTCTCTCTCTATCCTGCGTTTGAACTCAAGACGAGCG
EV542679       --> ..................................................
EX769813       --> CTTTAGCCTCGGAGTCTCTCTCTATCCTGCGTTTGAACTCAAGACGAGCG
EY903840       --> ..................................................
FD536697       --> CTTTAGCCTCGGAGTCTCTCTCTATCCTGCGTTTGAACTCAAGACGAGCG
FD546684       --> CTTTAGCCTCGGAGTCTCTCTCTATCCTGCGTTTGAACTCAAGACGAGCG
FD968689       --> ..................................................
FD537353       --> CTTTAGCCTCGGAGTCTCTCTCTATCCTGCGTTTGAACTCAAGACG....
FD539970       --> ..................................................
EV544077       --> CTTTAGCCTCGGAGTCTCTCTCTATCCTGC--ATGAACTCAAGACGAGCG
EV570587       --> CTTTAGCCTCGGAGTCTCTCTCTATCCTGCGTTTGAACTCAAGACGAGCG
EV570588       --> CTTTAGCCTCGGAGTCTCTCTCTATCCTGCGTTTGAACTCAAGACGAGCG
EY895229       --> CTTTAGCCTCGGAGTCTCTCTCTATCCTGCGTTTGAACTCAAGACGAGCG
EV542523       --> CTTTAGCCTCGGAGTCTCTCTCTATCCTGCGTTTGAACTCAAGACGAGCG

               801    -    851
UN15969        --> ATATGGCCAGTTTGTGCTGGTCCTAGTATACCTTTGGGATCCCATTCGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564760       <-- ATATGGCCAGTTTGTGCTGGTCCTAGTATACCTTTGGGATCC........
EV535919       <-- ATATGGCCAGTTTGTGCTGGTCCTAATATACCTTTCGGATCCCATTCGAA
FD550771       <-- ATATGGCCAGTTTGTGCTGGTCCTAGTATACCTTTCGGATCCCATc....
EV548402       <-- ATATGGCCAGTTTGTGCTGGTCCTAGTATACCTTTGGGATCCCATTCGCA
EV549483       <-- ATATGGCCAGTTTGTGCTGGTCCTAGTATACCTTTGGGATCCCATTCGCA
FD950085       <-- ATATGGCCAGTTTGTGCTGGTCCTAGTATACCTTTGGGATCCCATTCGCA
EV536488       <-- ATATGGCCAGTTTGTGCTGGTCCTAATATACCTTTCGGATCCCATTCGCA
FD954261       <-- ATATGGCCAGTTTGTGCTGGTCCTAGTATACCTTTGGGATCCCATTCGCA
FD540957       <-- ATATGGCCAGTTTGTGCTGGTCCTAATATACCTTTCGGATCCCATTCGCA
EY915200       <-- ATATGGCCAGTTTGTGCTGGTCCTAGTATACCTTTGGGATCCCATTCGCA
EY908068       <-- ATATGGCCAGTTTGTGCTGGTCCTAATATACCTTTCGGATCCCATTCGCA
FD544335       <-- ATATGGCCAGTTTGTGCTGGTCCTAATATACCTTTGGGATCCCATTCGCA
EV538538       <-- ATATGGCCGGTTTGTGCTGGTCCTAGTATACCTTTGGGATCCCATTCGCA
EV535365       <-- ATATGGCCGGTTTGTGCTGGTCCTAGTATACCTTTGGGATCCCATTCGCA
EV538737       <-- ATATGGCCGGTTTGTGCTGGTCCTAGTATACCTTTGGGATCCCATTCGCA
EV549461       <-- ATATGGCCAGTTTGTGCTGGTCCTAGTATACCTTTGGGATCCCATTCGCA
FD544086       <-- ATATGGCCAGTTTGTGCTGGTCCTAATATACCTTTGGGATCCCATTCGCA
FD939067       <-- ATATGGCCAGTTTGTGCTGGTCCTAGTATACCTTTGGGATCCCATTCGCA
EY946656       <-- ATATGGCCAGTTTGTGCTGGTCCTAGTATACCTTTGGGATCCCATTCGCA
EX766127       <-- ATATGGCCAGTTTGTGCTGGTCCTAGTATACCTTTCGGATCCCATTCGCA
FD972890       <-- ATATGGCCAGTTTGTGCTGGTCCTAATATACCTTTCGGATCCCATTCGCA
FD540133       <-- ........................................CCCATTCGCA
FD539767       --> ..................................................
EX752928       --> ..................................................
EV540924       --> ..................................................
EV540068       --> ATATGGCC..........................................
EV540482       --> ATATGGCCAGTTTGTGCTGGTCCTAATATACCTTTCGGATCCCATT....
EV542679       --> ..................................................
EX769813       --> ATATGGCCAGTTTGTGCTGGTCC...........................
EY903840       --> ..................................................
FD536697       --> ATATGGCCAGTTTGTGCT................................
FD546684       --> ATATGGCCAGTTTGTGCTGGTCCTAGTATACCTTTCGGA...........
FD968689       --> ..................................................
FD537353       --> ..................................................
FD539970       --> ..................................................
EV544077       --> ATATGGCCAGTTTGTGCTGGTCCTAGTATACCTTTGGGATCCCATTC...
EV570587       --> ATATGGCCAGTTTGTGCTGGTCCTAGTATACCTTTG..............
EV570588       --> ATATGGCCAGTTTGTGCTGGTCCTAGTATACCTTTGGGATCCCATTCGCA
EY895229       --> ATATGACCAGTTTGTGCTGGTCCTAGTATACCTTTGGGATCCCATTCGCA
EV542523       --> ATATGGCCGGTTTGTGCTGGTCCTAGTATACCTTTGGGATCCCATTCGCA

               851    -    901
UN15969        --> GGAGATTTTGCTCCTTCGTGTATTAATTCTCGGGACTTTACGGACGGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564760       <-- ..................................................
EV535919       <-- GGAGATTTTGTTCCTTCGTGTATTAATTCTCGGGACTTTACGGACGGTGT
FD550771       <-- ..................................................
EV548402       <-- GGAGATTTTGCTCCTTCGTGTATTAATTCTCGGGACTTTACGGACGGTGT
EV549483       <-- GGAGATTTTGCTCCTTCGTGTATTAGTTCTCGGGACTTTACGGACGGTGT
FD950085       <-- GGAGATTTTGCTCCTTCGTGTATTAATTCTCGGGACTTTACGGACGGTGT
EV536488       <-- GGAGATTTTGTTCCTTCGTGTATTAATTCTCGGGACTTTACGGACGGTGT
FD954261       <-- GGAGATTTTGCTCCTTCGTATATTAATTCTCGGGACTTTACGGACGGTGT
FD540957       <-- GGAGATTTTGTTCCTTTGTGTATTAATTATCGGGACTTTACGGACGGTGT
EY915200       <-- GGAGATTTTGCTCCTTCGCGTATTAATTCTCGGGACTTTACGGACGGTGT
EY908068       <-- GGAGATTTTGTTCCTTCGTGTATTAATTCTCGGGACTTTACGGACGGTGT
FD544335       <-- GGAGATTTTGCTCCTTCGTGTATTAATTCTCGGGACTTTACGGACGGTGT
EV538538       <-- GGAGATTTTGCTCCTTCGTGTATTAATTCTCGGGACTTTACGGACGGTGT
EV535365       <-- GGAGATTTTGCTCCTTCGTGTATTAATTCTCGGGACTTTACGGACGGTGT
EV538737       <-- GGAGATTTTGCTCCTTCGTGTATTAATTCTCGGGACTTTACGGACGGTGT
EV549461       <-- GGAGATTTTGCTCCTTCGTGTATTAGTTCTCGGGACTTTACGGACGGTGT
FD544086       <-- GGAGATTTTGCTCCTTCGTGTATTAATTCTCGGGACTTTACGGACGGTGT
FD939067       <-- GGAGATTTTGCTCCTTCGTGTATTAATTCTCGGGACTTTACGGACGGTGT
EY946656       <-- GGAGATTTTGCTCCTTCGTGTATTAATTCTCGGGACTTTACGGACGGTGT
EX766127       <-- GGAGATTTTGCTCCTTCGTGTATTAATTCTCGGGACTTTACGGACGGTGT
FD972890       <-- GGAGACTTTGTTCCTTCGTGTATTAATTCTCGGGACTTTACGGACGGTGT
FD540133       <-- GGAGATTTTGTTCCTTCGTGTATTATTTCTCGGGACTTTACGGACGGTGT
FD539767       --> ..................................................
EX752928       --> ..................................................
EV540924       --> ..................................................
EV540068       --> ..................................................
EV540482       --> ..................................................
EV542679       --> ..................................................
EX769813       --> ..................................................
EY903840       --> ..................................................
FD536697       --> ..................................................
FD546684       --> ..................................................
FD968689       --> ..................................................
FD537353       --> ..................................................
FD539970       --> ..................................................
EV544077       --> ..................................................
EV570587       --> ..................................................
EV570588       --> ..................................................
EY895229       --> G-AGATTT-GCTCCTTCGTGTAT-AATTCTCGGGACTT............
EV542523       --> GGAGATT...........................................

               901    -    951
UN15969        --> TCGCGAAGGCGATTCCTATTGAGAGCGAAGCCATTGTTATACTTTTTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564760       <-- ..................................................
EV535919       <-- TCGCGAAGGCGATTCCTATTGAGAGCGAAGCCATTGTTATACTTTTTTTT
FD550771       <-- ..................................................
EV548402       <-- TCGCAAAGGCGATTCCTATTGAGAGCGAAGCCATT------GTTATTTTT
EV549483       <-- TCGCAAAGGCGATTCCTATTGAGAGCGAAGCCATTGTTATtttttctggg
FD950085       <-- TCGCAAAGGCGATTCCTATTGAGAGCGAAGCCATTGTTATtttttctggg
EV536488       <-- TCGCGAAGGCGATTCCTATTGAGAGCGAAGCCATTGTTATACTTTTTTTT
FD954261       <-- TCGCAAAGGCGATTCCTATTGAGAGCGAAGCCATT------GTTATTTTT
FD540957       <-- TCGCGAAGGCGATTCCTATTGAGAGCGAAGCCATTGTTATACTTTTTTTT
EY915200       <-- TCGCAAAGGCGATTCCTATTGAGAGCGAAGCCATT------GTTATTTTT
EY908068       <-- TCGCGAAGGCGATTCCTATTGAGAGCGAAGCCATTGTTATACTTTTTTTT
FD544335       <-- TCGCGAAGGCGATTCCTATTGAGAGCGAAGCCATTGTTATACTTTTTTTT
EV538538       <-- TCGCGAAGGCGATTCCTATTGAGAGCGAAGCCATTGTTATACTTTTTTTT
EV535365       <-- TCGCGAAGGCGATTCCTATTGAGAGCGAAGCCATTGTTATACTTTTTTTT
EV538737       <-- TCGCGAAGGCGATTCCTATTGAGAGCGAAGCCATTGTTATACTTTTTTTT
EV549461       <-- TCGCAAAGGCGATTCCTATTGAGAGCGAAGCCATTGTTATtttttctggg
FD544086       <-- TCGCGAAGGCGATTCCTATTGAGAGCGAAGCCATTGTTATACTTTTTTTT
FD939067       <-- TCGCAAAGGCGATTCCTATTGAGAGCGAAGCCATT------GTTATTTTT
EY946656       <-- TCGCAAAGGCGATTCCTATTGAGAGCGAAGCCATT------GTTATTTTT
EX766127       <-- TCGCGAAGGCGATTCCTATTGAGAGCGAAGCCATTGTTATACTTTTTTTT
FD972890       <-- TCGCGAAGGCGATTCCTATTGAGAGCGAAGCCATTGTTATACTTTTTTTT
FD540133       <-- TCGCGAAGGCGATTCCTATTGAGAGCGAAGCCATTGTTATACTTTTTTTT
FD539767       --> ..................................................
EX752928       --> ..................................................
EV540924       --> ..................................................
EV540068       --> ..................................................
EV540482       --> ..................................................
EV542679       --> ..................................................
EX769813       --> ..................................................
EY903840       --> ..................................................
FD536697       --> ..................................................
FD546684       --> ..................................................
FD968689       --> ..................................................
FD537353       --> ..................................................
FD539970       --> ..................................................
EV544077       --> ..................................................
EV570587       --> ..................................................
EV570588       --> ..................................................
EY895229       --> ..................................................
EV542523       --> ..................................................

               951    -   1001
UN15969        --> T-CTGGGAGGCTCTGCTTTCACTAGCTACGTTACGTTATCTCCTTAACTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD564760       <-- ..................................................
EV535919       <-- T-CTGGGAGGCTCTGCTTTCc.............................
FD550771       <-- ..................................................
EV548402       <-- T-CTGGGAGGCTCTGCTTTCcc............................
EV549483       <-- aggctctcc.........................................
FD950085       <-- aggctctcc.........................................
EV536488       <-- TTCTGGGAGGCTCTGCTTTCcc............................
FD954261       <-- T-CTGGGAGGCTCTGCTTTCACTAGCTACGTTcccct.............
FD540957       <-- T-CTGGGAGGCTCTc...................................
EY915200       <-- T-CTGGGAGGCTCTGCTTTCc.............................
EY908068       <-- T-CTGGGAGGCTCTcc..................................
FD544335       <-- T-CTGGGAGGCTCTcc..................................
EV538538       <-- T-CTGGGAGGCTCTcc..................................
EV535365       <-- T-CTGGGAGGCTCTGCTTTCACTAGCTACGTTcc................
EV538737       <-- TTCTGGGAGGCTCTGCTTTCACTAGCTACGTTcc................
EV549461       <-- aggctctcc.........................................
FD544086       <-- T-CTGGGAGGCTCTc...................................
FD939067       <-- T-CTGGGAGGCTCTGCTTcc..............................
EY946656       <-- T-CTGGGAGGCTCTGCTTTCACTAGCTACGTTcc................
EX766127       <-- T-CTGGGAGGCTCTGCTTTCcc............................
FD972890       <-- T-CTGGGAGGCTCTcc..................................
FD540133       <-- T-CTGGGAGGCTCTGCTTTCACTAGCTACGTTACGTTATCTCCTTAACTA
FD539767       --> ..................................................
EX752928       --> ..................................................
EV540924       --> ..................................................
EV540068       --> ..................................................
EV540482       --> ..................................................
EV542679       --> ..................................................
EX769813       --> ..................................................
EY903840       --> ..................................................
FD536697       --> ..................................................
FD546684       --> ..................................................
FD968689       --> ..................................................
FD537353       --> ..................................................
FD539970       --> ..................................................
EV544077       --> ..................................................
EV570587       --> ..................................................
EV570588       --> ..................................................
EY895229       --> ..................................................
EV542523       --> ..................................................

               1001   -   1051
UN15969        --> TCTATCTCTTCC
                   ~~~~~~~~~~~~
FD564760       <-- ............
EV535919       <-- ............
FD550771       <-- ............
EV548402       <-- ............
EV549483       <-- ............
FD950085       <-- ............
EV536488       <-- ............
FD954261       <-- ............
FD540957       <-- ............
EY915200       <-- ............
EY908068       <-- ............
FD544335       <-- ............
EV538538       <-- ............
EV535365       <-- ............
EV538737       <-- ............
EV549461       <-- ............
FD544086       <-- ............
FD939067       <-- ............
EY946656       <-- ............
EX766127       <-- ............
FD972890       <-- ............
FD540133       <-- TCTATCTCTTCC
FD539767       --> ............
EX752928       --> ............
EV540924       --> ............
EV540068       --> ............
EV540482       --> ............
EV542679       --> ............
EX769813       --> ............
EY903840       --> ............
FD536697       --> ............
FD546684       --> ............
FD968689       --> ............
FD537353       --> ............
FD539970       --> ............
EV544077       --> ............
EV570587       --> ............
EV570588       --> ............
EY895229       --> ............
EV542523       --> ............