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Alignment for radish unigene UN15975

               1      -     51
UN15975        --> GGACAAGTTTCTTATCTTCTACTCCCACTAGATTCTATTCTACAAAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945371       <-- ..................................................
FD951735       <-- ..................................................
EY903962       <-- ..................................................
FD968021       <-- ..................................................
EX901637       <-- ..................................................
EY923980       --> GGACAAGTTTCTTATCTTCTACTCCCACTAGATTCTATTCTACAAAAGAA
FY431967       --> ..................................................
EY938546       --> ..................................................
FD558730       --> ..................................................
EX764291       --> ..................................................
FD939769       --> ..................................................
EY908228       --> ..................................................

               51     -    101
UN15975        --> ACTTCAATTAGGTTCACAACCTCCACACACTTCCAAAAACAAGAACCCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945371       <-- ..................................................
FD951735       <-- ..................................................
EY903962       <-- ..................................................
FD968021       <-- ..................................................
EX901637       <-- ..................................................
EY923980       --> ACTTCAATTAGGTTCACAACCTCCACACACTTCCAAAAACAAGAACCCTA
FY431967       --> .........AGGTTCACAACCTCCACACACTTCCAAAAACAAGAACCCTA
EY938546       --> ......................ggACACACTTCCAAAAACAAGAACCCTA
FD558730       --> ................................ggAAAAACAAGAACCCTA
EX764291       --> ..................................................
FD939769       --> ..................................................
EY908228       --> ..................................................

               101    -    151
UN15975        --> AACTCTAAAGTTTCTTTCTTTCTTCTTCTTCCTTACAGGTTTCTTGTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945371       <-- ..................................................
FD951735       <-- ..................................................
EY903962       <-- ..................................................
FD968021       <-- ..................................................
EX901637       <-- ..................................................
EY923980       --> AACTCTAAAGTTTCTTTCTTTCTTCTTCTTCCTTACAGGTTTCTTGTTCT
FY431967       --> AACTCTAAAGTTTCTTTCTTTCTTCTTCTTCCTTACAGGTTTCTTGTTCT
EY938546       --> AACTCTAAAGTTTCTTTCTTTCTTCTTCTTCCTTACAGGTTTCTTGTTCT
FD558730       --> AACTCTAAAGTTTCTTTCTTTCTTCTTCTTCCTTACAGGTTTCTTGTTCT
EX764291       --> ..................................................
FD939769       --> ..................................................
EY908228       --> ..................................................

               151    -    201
UN15975        --> TGAAATTAGGGTTAATTACTTTTTTTTCCTTCACTTCTCCGGACCTTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945371       <-- ..................................................
FD951735       <-- ..................................................
EY903962       <-- ..................................................
FD968021       <-- ..................................................
EX901637       <-- ..................................................
EY923980       --> TGAAATTAGGGTTAATTACTTTTTTTTCCTTCACTTCTCCGGACCTTAAA
FY431967       --> TGAAATTAGGGTTAATTACTTTTTTTTCCTTCACTTCTCCGGACCTTAAA
EY938546       --> TGAAATTAGGGTTAATTACTTTTTTT-CCTTCACTTCTCCGGACCTTAAA
FD558730       --> TGAAATTAGGGTTAATTACTTTTTTTTCCTTCACTTCTCCGGACCTTAAA
EX764291       --> ..................................................
FD939769       --> ..................................................
EY908228       --> ..................................................

               201    -    251
UN15975        --> AATTCAGATCTTTCCTCAGAAAAAAGAGATACCCAACTCGTGTTTTTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945371       <-- ..................................................
FD951735       <-- ..................................................
EY903962       <-- ..................................................
FD968021       <-- ..................................................
EX901637       <-- ..................................................
EY923980       --> AATTCAGATCTTTCCTCAGAAAAAAGAGATACCCAACTCGTGTTTTTTGT
FY431967       --> AATTCAGATCTTTCCTCAGAAAAAAGAGATACCCAACTCGTGTTTTTTGT
EY938546       --> AATTCAGATCTTTCCTCAGAAAAAAGAGATACCCAACTCGTGTTTTTTGT
FD558730       --> AATTCAGATCTTTCCTCAGAAAAAAGAGATACCCAACTCGTGTTTTTTGT
EX764291       --> ..................................................
FD939769       --> ..................................................
EY908228       --> ..................................................

               251    -    301
UN15975        --> GTGTGTCTGAATATAGATAAACGTCACATATATCCATATATTTGAGTGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945371       <-- ..................................................
FD951735       <-- ..................................................
EY903962       <-- ..................................................
FD968021       <-- ..................................................
EX901637       <-- ..................................................
EY923980       --> GTGTGTCTGAATATAGATAAACGTCACATATATCCATATATTTGAGTGTG
FY431967       --> GTGTGTCTGAATATAGATAAACGTCACATATATCCATATATTTGAGTGTG
EY938546       --> GTGTGTCTGAATATAGATAAACGTCACATATATCCATATATTTGAGTGTG
FD558730       --> GTGTGTCTGAATATAGATAAACGTCACATATATCCATATATTTGAGTGTG
EX764291       --> ..................................................
FD939769       --> ..................................................
EY908228       --> ..................................................

               301    -    351
UN15975        --> TAAAAGAGGAAAAAAAA--GAAAAATGGGAAGGGGAAGAGTAGAGCTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945371       <-- ..................................................
FD951735       <-- ..................................................
EY903962       <-- ..................................................
FD968021       <-- ..................................................
EX901637       <-- ..................................................
EY923980       --> TAAAAGAGGAAAAAAAAAAGAAAAATGGGAAGGGGAAGAGTAGAGCTGAA
FY431967       --> TAAAAGAGGAAAAAAAA-AGAAAAATGGGAAGGGGAAGAGTAGAGCTGAA
EY938546       --> TAAAAGAGGAAAAAAAA--GAAAAATGGGAAGGGGAAGAGTAGAGCTGAA
FD558730       --> TAAAAGAGGAAAAAAAA--GAAAAATGGGAAGGGGAAGAGTAGAGCTGAA
EX764291       --> ..................................................
FD939769       --> ..................................................
EY908228       --> ..................................................

               351    -    401
UN15975        --> GAGGATAGAGAACAAGATCAACCGACAAGTAACGTTTGCGAAGCGTAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945371       <-- ..................................................
FD951735       <-- ..................................................
EY903962       <-- ..................................................
FD968021       <-- ..................................................
EX901637       <-- ..................................................
EY923980       --> GAGGATAGAGAACAAGATCAACCGACAAGTAACGTTTGCGAAGCGTAGGA
FY431967       --> GAGGATAGAGAACAAGATCAACCGACAAGTAACGTTTGCGAAGCGTAGGA
EY938546       --> GAGGATAGAGAACAAGATCAACCGACAAGTAACGTTTGCGAAGCGTAGGA
FD558730       --> GAGGATAGAGAACAAGATCAACCGACAAGTAACGTTTGCGAAGCGTAGGA
EX764291       --> ..................................................
FD939769       --> ..................................................
EY908228       --> ..................................................

               401    -    451
UN15975        --> ACGGATTGTTGAAGAAAGCTTACGAATTGTCTGTTCTTTGCGATGCTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945371       <-- ..........................gaatgtctgtcTTGCGATGCTGAG
FD951735       <-- ..................................................
EY903962       <-- ..................................................
FD968021       <-- ..................................................
EX901637       <-- ..................................................
EY923980       --> ACGGATTGTTGAAGAAAGCTTACGAATTGTCTGTTCTTTGCGATGCTGAG
FY431967       --> ACGGATTGTT........................................
EY938546       --> ACGGATTGTTGAAGAAAGCTTACGAATTGTCTGTTCTTTGCGATGCTGAG
FD558730       --> ACGGATTGTTGAAGAAAGCTTACGAATTGTCTGTTCTTTGCGATGCTGAG
EX764291       --> ..................................................
FD939769       --> ..................................................
EY908228       --> ..................................................

               451    -    501
UN15975        --> GTGGCTCTCATCATCTTCTCCAACCGTGGCAAGCTCTATGAGTTTTGCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945371       <-- GTGG-TCTCATCATCTTCTCCAACCGTGGCAAGCTCTATGAGTTTTGCAG
FD951735       <-- ..................................................
EY903962       <-- ..................................................
FD968021       <-- ..................................................
EX901637       <-- ..................................................
EY923980       --> GTGGCTCTCATCATCTTCTCCAACCGTGGCAAGCTCTATGAGTTTTGCAG
FY431967       --> ..................................................
EY938546       --> GTGGCTCTCATCATCTTCTCCAACCGTGGCAAGCTCTATGAGTTTTGCAG
FD558730       --> GTGGCTCTCATCATCTTCTCCAACCGTGGCAAGCTCTATGAGTTTTGCAG
EX764291       --> .........................GTGGCAAGCTCTATGAGTTTTGCAG
FD939769       --> ..................................................
EY908228       --> ..................................................

               501    -    551
UN15975        --> CTCCTCTAACATGATCAAGACACTGGAACGGTACCAGAAATGCAGTTATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945371       <-- CTCCTCTAACATGATCAGGACACTGGAACGGTACCAGAAATGCAGTTATG
FD951735       <-- ..................................................
EY903962       <-- ..................................................
FD968021       <-- ..................................................
EX901637       <-- ..................................................
EY923980       --> CTCCTCTAACATGATCAAGACACTGGAACGGTACCAGAAATGCAGTTATG
FY431967       --> ..................................................
EY938546       --> CTCCTCTAACATGATCAAGACACTGGAACGGTACCAGAAATGCAGTTATG
FD558730       --> CTCCTCTAACATGATCAAGACACTGGAACGGTACCAGAAATGCAGTTATG
EX764291       --> CTCCTCTAACATGATCAAGACACTGGAACGGTACCAGAAATGCAGTTATG
FD939769       --> ..................................................
EY908228       --> ..................................................

               551    -    601
UN15975        --> GTTCTATTGAAGTCAACAACAAACCTGCCAAAGAACTTGAGAATAGCTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945371       <-- GTTCTATTGAAGTCAACAACAAACCTGCCAAAGAACTTGAGAATAGCTAC
FD951735       <-- .................................AACTTGAGAATAGCTAC
EY903962       <-- ..................................................
FD968021       <-- ..................................................
EX901637       <-- ..................................................
EY923980       --> GTTCTATTGAAGTCAACAACAAACCTGCCAAAGAACTTGAGAATAGCTAC
FY431967       --> ..................................................
EY938546       --> GTTCTATTGAAGTCAACAACAAACCTGCCAAAGAACTTGAGAATAGCTAC
FD558730       --> GTTCTATTGAAGTCAACAACAAACCTGCCAAAGAACTTGAGAATAGCTAC
EX764291       --> GTTCTAT-GAAGTCAACAACAAACCTGCCAAAGAACTTGAGAATAGCTAC
FD939769       --> ....gATTGAAGTCAACAACAAACCTGCCAAAGAACTTGAGAATAGCTAC
EY908228       --> ..................................................

               601    -    651
UN15975        --> AGAGAGTATCTGAAGCTTAAGGGTAGGTATGAGAGCCTTCAGCGCCAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945371       <-- AGAGAGTATCTGAAGCTTAAGGGTAGGTATGAGAGCCTTCAGCGCCAACA
FD951735       <-- AGAGAGTATCTGAAGCTTAAGGGTAGGTATGAGAGCCTTCAGCGCCAACA
EY903962       <-- ..................................................
FD968021       <-- ..................................................
EX901637       <-- ..................................................
EY923980       --> AGAGAGTATCTGAAGCTTAAGGGTAGGTATGAGAGCCTTCAGCGCCAACA
FY431967       --> ..................................................
EY938546       --> AGAGAGTATCTGAAGCTTAAGGGTAGGTATGAGAGCCTTCAGCGCCAACA
FD558730       --> AGAGAGTATCTGAAGCCTAAGGGTAGGTATGAGAGCCTTCAGCGCCAACA
EX764291       --> AGAGAGTATCTGAAGCTTAAGGGTAGGTATGAGAGCCT............
FD939769       --> AGAGAGTATCTGAAGCTTAAGGGTAGGTATGAGAGCCTTCAGCGCCAACA
EY908228       --> ..................................................

               651    -    701
UN15975        --> AAGGAATCTTCTTGGGGAGGATTTAGGACCTCTCAACTCAAAGGAACTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945371       <-- AAGGAATCTTCTTGGGGAGGATTTAGGACCTCTCAACTCAAAGGAACTAG
FD951735       <-- AAGGAATCTTCTTGGGGAGGATTTAGGACCTCTCAACTCAAAGGAACTAG
EY903962       <-- ...........................ggCTCTCAACTCAAAGGAACTAG
FD968021       <-- ..................................................
EX901637       <-- ..................................................
EY923980       --> AAGGA-TCTTCTTGGGGAGGATTTAG-ACCTCTCA-CTCAAAG-AACTAG
FY431967       --> ..................................................
EY938546       --> AAGGAATCTTCTTGGGGAGGATTTAGGACCTCTCAACTCAAAGGAACTAG
FD558730       --> AAGGAATCTTCTTGGGGAGGATTTAGGACCTCTCAACTCAAAGGAACTAG
EX764291       --> ..................................................
FD939769       --> AAGGAATCTTCTTGGGGATGATTTAGGACCTCTCAACTCAAAGGAACTAG
EY908228       --> ...........................ggCTCTCAACTCAAAGGAACTAG

               701    -    751
UN15975        --> AGCAGCTTGAGCGTCAACTAGATGGCTCTCTCAAGCAAGTTCGCTCCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945371       <-- AGCAGCTTGAGCGTCAACTAGATGGCTCTCTCAAGCAAGTTCGCTCCATC
FD951735       <-- AGCAGCTTGAGCGTCAACTAGATGGCTCTCTCAAGCAAGTTCGCTCCATC
EY903962       <-- AGCAGCTTGAGCGTCAACTATATGGCTCTCTCAAGCAAGTTCGCTCCATC
FD968021       <-- ..................................................
EX901637       <-- ..................................................
EY923980       --> AGCAGCTTGAGCGTCA-CTAGATGGCTCTCTCA-GCAAGT-CGCTC-ATC
FY431967       --> ..................................................
EY938546       --> AGCAGCTTGAGCGTCAACTAGATGGCTCTCTCAAGCAAGTTCTCTCCATC
FD558730       --> AGCAGCTTGAGCGTCAACTAGATGGCTCTCTCAAGCAAGTTCGCTCCATC
EX764291       --> ..................................................
FD939769       --> AGCAGCTTGAGCGTCAACTAGATGGCTCTCTCAAGCAAGTTCGCTCCATC
EY908228       --> AGCAGCTTGAGCGTCAACTATATGGCTCTCTCAAGCAAGTTCGCTCCATC

               751    -    801
UN15975        --> AAGACACAGTACATGCTTGACCAGCTCTCTGATCTTCAAAGCAAAGAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945371       <-- AAGACACAGTACATGCTTGACCAGCTCTCTGATCTTCAAAGCAAAGAGCA  Raphanus sativus cv Early Scarlet Globe
FD951735       <-- AAGACACAGTACATGCTTGACCAGCTCTCTGATCTTCAAAGCAAAGAGCA  Raphanus sativus cv Rat-Tail Radish #3870
EY903962       <-- AAGACACAGTACATGCTTGACCAGCTCTCTGATCTTCAAAGCAAAGAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968021       <-- ...........................TCTGATCTTCAAAGCAAAGAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX901637       <-- ...................................TCAAAGCAAAGAGCA  Raphanus sativus cv Early Scarlet Globe
EY923980       --> -AGACACAGTACATGCTTGATCAGCTCTCTGATCT-C-AAGCAAAGAGCA  Raphanus raphanistrum subsp. landra
FY431967       --> ..................................................  Raphanus sativus cv GSK3-1
EY938546       --> AAGACACAGTACATGCTTGATCAGCTCTCTGATCTTCAAAGCAAAGAGCA  Raphanus sativus cv Early Scarlet Globe
FD558730       --> AAGACACAGTACATGCTTGATCAGCTCTCTGATCTTCAAAGCAA-GAGCA  Raphanus raphanistrum subsp. landra
EX764291       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD939769       --> AAGACACAGTACATGCTTGACCAGCTCTCTGATCTTCAAAGCAAAGAGCA  Raphanus sativus var. oleiformis
EY908228       --> AAGACACAGTACATGCTTGACCAGCTCTCTGATCTTCAAAGCAAAGAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)

               801    -    851
UN15975        --> AATGTTGCTTGAAACCAATAGAGCTTTGGCAATGAAGCTGGATGATATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945371       <-- AATGTTGCTTGAAACCAATAGAGCTTTGGCAATGAAGCTGGATGATATGA
FD951735       <-- AATGTTGCTTGAAACCAATAGAGCTTTGGCAATGAAGCTGGATGATATGA
EY903962       <-- AATGTTGCTTGAAACCAATAGAGCTTTGGCAATGAAGCTGGATGATATGA
FD968021       <-- AATGTTGCTTGAAACCAATAGAGCTTTGGCAATGAAGCTGGATGATATGA
EX901637       <-- AATGTTGCTTGAAACCAATAGAGCTTTGGCAATGAAGCTGGATGATATGA
EY923980       --> Atgtgctgaaccatagagcatggcgatga.....................
FY431967       --> ..................................................
EY938546       --> AATGTTGCTTGAAACCAATAGAGCATTGGCGATGAAGCTGGATGATATGA
FD558730       --> AATGTTGCTTGAAAC-AATAGAGCATTGGCGATGAAGCTGGATGATATG.
EX764291       --> ..................................................
FD939769       --> AATGTTGCTTGAAACCAATAGAGCTTTGGCAATGAAGCTGGATGATATGA
EY908228       --> AATGTTGCTTGAAACCAATAGAGCTTTGGCAATGAAGCTGGATGATATGA

               851    -    901
UN15975        --> TTGGTGTGAGAAGCCATCATATGGGAGGAGGAGGAGGA---TGGGAAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945371       <-- TTGGTGTGAGAAGCCATCATATGGGAGGAGGAGGAGGA---TGGGAAGGC  Raphanus sativus cv Early Scarlet Globe
FD951735       <-- TTGGTGTGAGAAGCCATCATATGGGAGGAGGAGGAGGA---TGGGAAGGC  Raphanus sativus cv Rat-Tail Radish #3870
EY903962       <-- TTGGTGTGAGAAGCCATCATATGGGAGGAGGAGGAGGAGGATGGGAAGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968021       <-- TTGGTGTGAGAAGCCATCATATGGGAGGAGGAGGAGGAGGATGGGAAGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX901637       <-- TTGGTGTGAGAAGCCATCATATGGGAGGAGGAGGAGGA---TGGGAAGGC  Raphanus sativus cv Early Scarlet Globe
EY923980       --> ..................................................  Raphanus raphanistrum subsp. landra
FY431967       --> ..................................................  Raphanus sativus cv GSK3-1
EY938546       --> T.................................................  Raphanus sativus cv Early Scarlet Globe
FD558730       --> ..................................................  Raphanus raphanistrum subsp. landra
EX764291       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD939769       --> TTGGTGTGAGAAGCCATCATATGGGAGGAGGAGGAGGA---TGGGAAGGC  Raphanus sativus var. oleiformis
EY908228       --> TTGGTGTGAGAAGCCATCATATGGGAGGAGGAGGAGGAGGATGGGAAGGC  Raphanus raphanistrum subsp. raphanistrum (MS)

               901    -    951
UN15975        --> AATGAACAGAATGTTTCGTACGAGCATCATCAAGCTCAGAGTCAAGGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945371       <-- AATGAACAGAATGTTTCGTACGAGCATCATCAAGCTCAGAGTCAAGGACT  Raphanus sativus cv Early Scarlet Globe
FD951735       <-- AATGAACAGAATGTTTCGTACGAGCATCATCAAGCTCAGAGTCAAGGACT  Raphanus sativus cv Rat-Tail Radish #3870
EY903962       <-- AATGAACAGAATGTCTCGTACGAGCATCATCAAGCTCAGTCTCAAGGACT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968021       <-- AATGAACAGAATGTCTCGTACGAGCATCATCAAGCTCAGTCTCAAGGACT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX901637       <-- AATGAACAGAATGTTTTGTACGAGCATCATCAAGCTCAGAGTCAAGGACT  Raphanus sativus cv Early Scarlet Globe
EY923980       --> ..................................................  Raphanus raphanistrum subsp. landra
FY431967       --> ..................................................  Raphanus sativus cv GSK3-1
EY938546       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD558730       --> ..................................................  Raphanus raphanistrum subsp. landra
EX764291       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD939769       --> AATGAACAGAATGTTTCGTACGAGCATCATCAAGCTCAGAGTCAAGGACT  Raphanus sativus var. oleiformis
EY908228       --> AATGAACAGAATGTCTCGTACGAGCATCATCAAGCTCAGTCTCAAGGACT  Raphanus raphanistrum subsp. raphanistrum (MS)

               951    -   1001
UN15975        --> ATTCCAGCCTCTTGAATGCAATCCTACTCTGCAGATGGGGTACAACAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945371       <-- ATTCCAGCCTCTTGAATGCAATCCTACTCTGCAGATGGGGTACAACAATC
FD951735       <-- ATTCCAGCCTCTTGAATGCAATCCTACTCTGCAGATGGGGTACAACAATC
EY903962       <-- ATTCCAGCCTCTTGAATGCAATCCTACTCTGCAGATGGGGTACAACAATC
FD968021       <-- ATTCCAGCCTCTTGAATGCAATCCTACTCTGCAGATGGGGTACAACAATC
EX901637       <-- ATTCCAGCCTCTTGAATGCAATCCTACTTTGCAGATGGGGTACAACAATC
EY923980       --> ..................................................
FY431967       --> ..................................................
EY938546       --> ..................................................
FD558730       --> ..................................................
EX764291       --> ..................................................
FD939769       --> ATTCCAGCCTCTTGAATGCAATCCTACTCTGCAGATGGGGTACAACAATC
EY908228       --> ATTCCAGCCTCTTGAATGCAATCCTACTCTGCAGATGGGGTACAACAATC

               1001   -   1051
UN15975        --> CAGTAGGTTCGGAGCAGATAACTGCAACAACACAAGCGCAGGCGCAGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945371       <-- CAGTAGGTTCGGAGCAGATAACTGCAACAACACAAGCGCAGGCGCAGCCA  Raphanus sativus cv Early Scarlet Globe
FD951735       <-- CAGTAGGTTCGGAGCAGATAACTGCAACAACACAAGCGCAGGCGCAGCCA  Raphanus sativus cv Rat-Tail Radish #3870
EY903962       <-- CAGTAGGCTCGGAGCAGATAACTGCAACAACACAAGCTCAGACGCAGCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968021       <-- CAGTAGGCTCGGAGCAGATAACTGCAACAACACAAGCTCAGGCGCAGCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX901637       <-- CAGTAGGTTCGGAGCAGATAACTGCAACAACACAAGCGCAGGGGCAGCCA  Raphanus sativus cv Early Scarlet Globe
EY923980       --> ..................................................  Raphanus raphanistrum subsp. landra
FY431967       --> ..................................................  Raphanus sativus cv GSK3-1
EY938546       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD558730       --> ..................................................  Raphanus raphanistrum subsp. landra
EX764291       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD939769       --> CAGTAGGTTCGGAGCAGATAACTGCAACAACACAAGCGCAGGCGCAGCCA  Raphanus sativus var. oleiformis
EY908228       --> CAGTAGGCTCGGAGCAGATAACTGCAACAACACAAGCTCAGACGCAGCCA  Raphanus raphanistrum subsp. raphanistrum (MS)

               1051   -   1101
UN15975        --> GGGAACGGTTACATCCCAGGCTGGATGCTCTGAGTGTCCACATTCTGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945371       <-- GGGAACGGTTACATCCCAGGCTGGATGCTCTGAGTGTCCACATTTTGAGA  Raphanus sativus cv Early Scarlet Globe
FD951735       <-- GGGAACGGTTACATCCCAGGCTGGATGCTCTGAGTGTCCACATTCTGAGA  Raphanus sativus cv Rat-Tail Radish #3870
EY903962       <-- GGGAACGGTTACATCCCAGGCTGGATGCTCTGAGTGTC-ACATTCTGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968021       <-- GGGAACGGTTACATCCCAGGCTGGATGCTCTGAGTGTC-ACATTTTGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX901637       <-- GGGAACGGTTACATCCCAGGCTGGATGCTTTGAGTGTCCACATTTTGAGA  Raphanus sativus cv Early Scarlet Globe
EY923980       --> ..................................................  Raphanus raphanistrum subsp. landra
FY431967       --> ..................................................  Raphanus sativus cv GSK3-1
EY938546       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD558730       --> ..................................................  Raphanus raphanistrum subsp. landra
EX764291       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD939769       --> GGGAACGGTTACATCCCAGGCTGGATGCTCTTAGTGTCCACATTCTGAGA  Raphanus sativus var. oleiformis
EY908228       --> GGGAACGGTTACATCCCAGGCTGGATGCTCTGAGTGTC-ACATTCTGAGA  Raphanus raphanistrum subsp. raphanistrum (MS)

               1101   -   1151
UN15975        --> GTCAGTCAATGTGATCAAAACTCACCAACAAAAGCTCCGTTTTAAATAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945371       <-- GTCAGTCAATGTGATCAAAACTCACCAACAAAAGCTCCGTTTTAAATAAT
FD951735       <-- GTCAGTCAATGTGATCAAAACTCACCAACAAAAGCTCCGTTTTAAATAAT
EY903962       <-- GTCAGTCAATGTGATCAAAACTCACCAACAAAAGCTCCGTTTTAAATAAT
FD968021       <-- GTCAGTCAATGTGATCAAAACTCACCAACAAAAGCTCCGTTTTAAATAAT
EX901637       <-- GTCAGTCAATGTGATCAAAACTCACCAACAAAAGCTCCGTTTTAAATAAT
EY923980       --> ..................................................
FY431967       --> ..................................................
EY938546       --> ..................................................
FD558730       --> ..................................................
EX764291       --> ..................................................
FD939769       --> GTCAGTCAATGTGATCAAAACTCACCAACAAAAGCTCCGTTTTAAATAAT
EY908228       --> GTCAGTCAATGTGATCAAAACTCACCAACAAAAGCTCCGTTTTAAATAAT

               1151   -   1201
UN15975        --> ATAAATAGTAGTATAGAACACAAGACTTGGATTTATTTATATAATTAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945371       <-- ATAAATAGTAGTATAGAACACAAGACTTGGATTTATTTATATAATTAAGT
FD951735       <-- ATAAATAGTAGTATAGAACACAAGACTTGGATTTATTTATATAATTAAGT
EY903962       <-- ATAAATAGTAGTATAGAACACAAGACTTGGATTTATTTATATAATTAAGT
FD968021       <-- ATAAATAGTAGTATAGAACACAAGACTTGGATTTATTTATATAATTAAGT
EX901637       <-- ATAAATAGTAGTATAGAACACAAGACTTGGATTTATTTATATAATTAAGT
EY923980       --> ..................................................
FY431967       --> ..................................................
EY938546       --> ..................................................
FD558730       --> ..................................................
EX764291       --> ..................................................
FD939769       --> ATAAATAGTAGTATAGAACACAAGACTTGGATTTATTTATATAATTAAGT
EY908228       --> ATAAATAGTAGTATAGAACACAAGACTTGGATTTATTTATATAATTAAGT

               1201   -   1251
UN15975        --> GGCTATGTATATTGTCCTAAGGAATCTGCAGGACTTGAGTGTCTTCTGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945371       <-- GGCTATGTATATTGTCCTAAGGAATCTGCAGGACTTGAGTGTCTTCTGGG
FD951735       <-- GGCTATGTATATTGTCCTAAGGAATCTGCAGGACTTGAGTGTCTTCTGGG
EY903962       <-- GGCTATGTATATTGTCCTAAGGAATCTGCAGGACTTGAGTGTCTTCTGGG
FD968021       <-- GGCTATGTATATTGTCCTAAGGAATCTGCAGGACTTGAGTGTCTTCTGGG
EX901637       <-- GGCTATGTATATTGTCCTAAGGAATTTGCAGGACTTGAGTGTTTTTTGGG
EY923980       --> ..................................................
FY431967       --> ..................................................
EY938546       --> ..................................................
FD558730       --> ..................................................
EX764291       --> ..................................................
FD939769       --> GGCTATGTATATTGTCCTAAG-AATCT.......................
EY908228       --> GGCTATGTATATTGTCCTAAGGAATCTGCAGGACTTGAGTGTCTTCTGGG

               1251   -   1301
UN15975        --> AAACCTTGCTACATTTAAGGATTTGAAATGTGTGTGGAACTTTTTCTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945371       <-- AAACCTTGCTACATTTAAGGATT-GAAATGTGTGTGG.............  Raphanus sativus cv Early Scarlet Globe
FD951735       <-- AAACCTTGCTACATTTAAGGATT-GAAATGTGTGTGGAACTTGTTCTGAT  Raphanus sativus cv Rat-Tail Radish #3870
EY903962       <-- AAACCTTGCTACATTTAAGGATTTGAAATGTGT--GGAACTTTTTCTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD968021       <-- AAACCTTGCTACATTTAAGGATTTGAAATGTGT--GGAACTTTTTCTG..  Raphanus raphanistrum subsp. raphanistrum (MS)
EX901637       <-- AAACCTTGCTACATTTAAGGATT-GAAATGTGTGTGGAACTTGTTTTGAT  Raphanus sativus cv Early Scarlet Globe
EY923980       --> ..................................................  Raphanus raphanistrum subsp. landra
FY431967       --> ..................................................  Raphanus sativus cv GSK3-1
EY938546       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD558730       --> ..................................................  Raphanus raphanistrum subsp. landra
EX764291       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD939769       --> ..................................................  Raphanus sativus var. oleiformis
EY908228       --> AAACCTTGCTACATTTAAG-ATTTGAAATGTGTG--GAACTTTTTCTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)

               1301   -   1351
UN15975        --> TATTTAAATTGTCAAAGTA
                   ~~~~~~~~~~~~~~~~~~~
FD945371       <-- ...................
FD951735       <-- TATTTAAATTGTCAAAGTA
EY903962       <-- TACTTAA-TTGTC......
FD968021       <-- ...................
EX901637       <-- TATTTAAATTGTCAAAGT.
EY923980       --> ...................
FY431967       --> ...................
EY938546       --> ...................
FD558730       --> ...................
EX764291       --> ...................
FD939769       --> ...................
EY908228       --> TACTTAA-TTGTCAAAaaa