Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN15994

               -3     -     47
UN15994        --> ....CTCTAAAAACAAACTCTTATTGATTTCATAAATAGACAAAAGAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897590       <-- ........gAAAACAAACTCTTATTGATTTCATAAATAGACAAAAGAACA
FD559929       <-- ..................................................
EY925515       <-- ..................................................
FD542451       <-- ..................................................
FY445657       <-- ..................................................
EY930379       <-- ..................................................
FY433307       <-- ..................................................
FY446658       <-- ..................................................
EY939961       <-- ..................................................
EY941630       <-- ..................................................
FD557855       <-- ..................................................
EY925267       <-- ..................................................
EW730551       --> ..ggCTCTAAAAACAAACTCTTATTGATTTCATAAATAGACAAAAGAACA
EY920976       --> ..ggCTCTAATAACAAACTCTTATTGATTTCATAAATAGACAAAAGAACA
EY937164       --> cggaCTCTAAAAACAAACTCTTATTGATTTCATAAATAGACAAAAGAACA
FD555561       --> cggaCTCTAAAAACAAACTCTTATTGATTTCATAAATAGACAAAAGAACA
EY935803       --> ........AAAAACAAACTCTTATTGATTTCATAAATAGACAAAAGAACA
EX901320       --> ........gAAAACAAACTCTTATTGATTTCATAAATAGACAAAAGAACA
FD553879       --> ..................................................
EY920781       --> ..................................................

               47     -     97
UN15994        --> AAAAACGTATAGAAAAAA-CAAGAGTACAGAGGCTTTTATTATTGATTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897590       <-- AAAAACGTATAGAAAAAAACAAGAGTACAGAGGCTTTTATTATTGATTAT
FD559929       <-- ..............................tacagagctttatatgaTAT
EY925515       <-- ..................................................
FD542451       <-- ..................................................
FY445657       <-- ..................................................
EY930379       <-- ..................................................
FY433307       <-- ..................................................
FY446658       <-- ..................................................
EY939961       <-- ..................................................
EY941630       <-- ..................................................
FD557855       <-- ..................................................
EY925267       <-- ..................................................
EW730551       --> AAAAACGTATAGAAAAAA-CAAGAGTACAGAGGCTTTTATTATTGATTAT
EY920976       --> AAAAACGTATAGAAAAAA-CAAGAGTACAGAGGCTTTTATTATTGATTAT
EY937164       --> AAAAACGTATAGAAAAAA-CAAGAGTACAGAGGCTTTTATTATTGATTAT
FD555561       --> AAAAACGTATAGAAAAAA-CAAGAGTACAGAGGCTTTTATTATTGATTAT
EY935803       --> AAAAACGTATAGAAAAAA-CAAGAGTACAGAGACTTTTATTATTGATTAT
EX901320       --> AAAAACGTATAGAAAAAAACAAGAGTACAGAGGCTTTTATTATTGATTAT
FD553879       --> ..................................................
EY920781       --> ..................................................

               97     -    147
UN15994        --> ATTTGTGTATTTTGTGATGGACAACTTTTGCTACATCCAAGGGGAGTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897590       <-- ATTTGTGTATTTTGTGATGGACAACTTTTGCTACATCCAAGGGGAGTTGT
FD559929       <-- ATT-GTGTATTT-GTGACG-ACA-CTTT-GCTACATCCAAGGGGAGTTGT
EY925515       <-- ..................................................
FD542451       <-- ..................................................
FY445657       <-- ..................................................
EY930379       <-- ..................................................
FY433307       <-- ..................................................
FY446658       <-- ..................................................
EY939961       <-- ..................................................
EY941630       <-- ..................................................
FD557855       <-- ..................................................
EY925267       <-- ..................................................
EW730551       --> ATTTGTGTATTTTGTGATGGACAACTTTTGCTACATCCAAGGGGAGTTGT
EY920976       --> ATTTGTGTATTTTGTGATGGACAACTTTTGCTACATCCAAGGGGAGTTGT
EY937164       --> ATTTGTGTATTTTGTGATGGACAACTTTTGCTACATCCAAGGGGAGTTGT
FD555561       --> ATTTGTGTATTTTGTGACGGACAACTTTTGCTACATCCAAGGGGAGTTGT
EY935803       --> ATTTGTGTATTTTGTGATGGACAACTTTTGCTACATCCAAGGGGAGTTGT
EX901320       --> ATTTGTGTATTTTGTGATGGACAACTTTTGCTACATCCAAGGGGAGTTGT
FD553879       --> ..................................................
EY920781       --> ..................................................

               147    -    197
UN15994        --> GAAGAGGCATAGCAATGGATTTGACTTGTAGATAGCTATCGAGAGCGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897590       <-- GAAGAGGCATAGCAACGGATTTGACTTGTAGATAGCTATCGAGAGCGTCC
FD559929       <-- GAAGAGGCATAGCAATGGATTTGACTTGTAGATAGCTATCGAGAGCGTCC
EY925515       <-- .......................ACTTGTAGATAGCTATCGAGAGCGTCC
FD542451       <-- ..................................................
FY445657       <-- ..................................................
EY930379       <-- ..................................................
FY433307       <-- ..................................................
FY446658       <-- ..................................................
EY939961       <-- ..................................................
EY941630       <-- ..................................................
FD557855       <-- ..................................................
EY925267       <-- ..................................................
EW730551       --> GAAGAGGCATAGCAATGGATTTGACTTGTAGATAGCTATCGAGAGCGTCC
EY920976       --> GAAGAGGCATAGCAATGGATTTGACTTGTAGATAGCTATCGAGAGCGTCC
EY937164       --> GAAGAGGCATAGCAATGGATTTGACTTGTAGATAGCTATCGAGAGCGTCC
FD555561       --> GAAGAGGCATAGCAATGGATTTGACTTGTAGATAGCTATCGAGAGCGTCC
EY935803       --> GAAGAGGCATAGCAATGGATTTGACTTGTAGATAGCTATCGAGAGCGTCC
EX901320       --> GAAGAGGCATAGCAACGGATTTGACTTGTAGATAGCTATCGAGAGCGTCC
FD553879       --> ................................TAGCTATCGAGAGCGTCC
EY920781       --> ..................................................

               197    -    247
UN15994        --> ATGCCACTTTCACGACAGTTGCCACTCATCTTGTAGCCACCGTAAGGCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897590       <-- ATGCCACTTTCACGACAGTTGCCACTCATCTTGTAGCCACCGTAAGGCGA
FD559929       <-- ATGCCACTTTCACGACAGTTGCCACTCATCTTGTAGCCAC-GTAAGGCGA
EY925515       <-- ATGCCACTTTCACGACAGTTGCCACTCATCTTGTAGCCACCGTAAGGCGA
FD542451       <-- .................................................A
FY445657       <-- ..................................................
EY930379       <-- ..................................................
FY433307       <-- ..................................................
FY446658       <-- ..................................................
EY939961       <-- ..................................................
EY941630       <-- ..................................................
FD557855       <-- ..................................................
EY925267       <-- ..................................................
EW730551       --> ATGCCACTTTCACGACAGTTGCCACTCATCTTGTAGCCACCGTAAGGCGA
EY920976       --> ATGCCACTTTCACGACAGTTGCCACTCATCTTGTAGCCACCGTAAGGCGA
EY937164       --> ATGCCACTTTCACGACAGTTGCCACTCATCTTGTAGCCACCGTAAGGCGA
FD555561       --> ATGCCACTTTCACGACAGTTGCCACTCATCTTGTAGCCACCGTAAGGCGA
EY935803       --> ATGCCACTTTCACGACAGTTGCCACTCATCTTGTAGCCACCGTAAGGCGA
EX901320       --> ATGCCACTTTCACGACAGTTGCCACTCATCTTGTAGCCACCGTAAGGCGA
FD553879       --> ATGCCACTTTCACGACAGTTGCCACTCATCTTGTAGCCACCGTAAGGCGA
EY920781       --> .............................CTTGTAACCACCGTAAGGCGA

               247    -    297
UN15994        --> GTCGAGGTCAAATGCGAAGTAGCAGTTAACCCAAATGACTCCAGCTCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897590       <-- GTCGAGGTCAAATGCGAAGTAGCAGTTAACCCAAATGACTCCAGCTCTGA
FD559929       <-- GTCGAGGTCAAACGCGAAGTAGCAGTTAACCCAAATGACCCCAGCTCTGA
EY925515       <-- GTCGAGGTCAAACGCGAAGTAGCAGTTAACCCAAATGACCCCAGCTCTGA
FD542451       <-- GTCGAGGTCAAATGCGAAGTAGCAGTTTACCCAAATGACCCCAGCTCTGA
FY445657       <-- ..................................................
EY930379       <-- ..................................................
FY433307       <-- ..................................................
FY446658       <-- ..................................................
EY939961       <-- ..................................................
EY941630       <-- ..................................................
FD557855       <-- ..................................................
EY925267       <-- ..................................................
EW730551       --> GTCGAGGTCAAATGCGAAGTAGCAGTTAACCCAAATGACTCCAGCTCTGA
EY920976       --> GTCGAGGTCAAACGCGAAGTAGCAGTTAACCCAAATGACCCCAGCTCTGA
EY937164       --> GTCGAGGTCAAATGCGAAGTAGCAGTTAACCCAAATGACTCCAGCTCTGA
FD555561       --> GTCGAGGTCAAACGCGAAGTAGCAGTTAACCCAAATGACCCCAGCTCTGA
EY935803       --> GTCGAGGTCAAATGCGAAGTAGCAGTTAACCCAAATGACTCCAGCTCTGA
EX901320       --> GTCGAGGTCAAATGCGAAGTAGCAGTTAACCCAAATGACTCCAGCTCTGA
FD553879       --> GTCGAGGTCAAATGCGAAGTAACAGTTAACCCAAATGACTCCAGCTCTGA
EY920781       --> GTCGAGGTCAAATGCGAAGTAACAGTTAACCCAAATGACTCCAGCTCTGA

               297    -    347
UN15994        --> TTGATCTCGAAACCGTGTTGATAACGTCTATGTTCTGGCTCACTATTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897590       <-- TTGATCTCGAAACCGTGTTGATAACGTCTATGTTCTGGCTCACTATTCCA
FD559929       <-- TTGATCTCGAAACCGTGTTGATAACGTCTATGTTCTGGCTCACTATTCCA
EY925515       <-- TTGATCTCGAAACCGTGTTGATAACGTCTATGTTCTGGCTCACTATTCCA
FD542451       <-- TTGATCTCGAAACCGTGTTGATA-CGTCTATGTTCTGGCTTACTATTCCA
FY445657       <-- ..................................................
EY930379       <-- ..................................................
FY433307       <-- ..................................................
FY446658       <-- ..................................................
EY939961       <-- ..................................................
EY941630       <-- ..................................................
FD557855       <-- ..................................................
EY925267       <-- ..................................................
EW730551       --> TTGATCTCGAAACCGTGTTGATAACGTCTATGTTCTGGCTCACTATTCCA
EY920976       --> TTGATCTCGAAACCGTGTTGATAACGTCTATGTTCTGGCTCACTATTCCA
EY937164       --> TTGATCTCGAAACCGTGTTGATAACGTCTATGTTCTGGCTCACTATTCCA
FD555561       --> TTGATCTCGAAACCGTGTTGATAACGTCTATGTTCTGGCTCACTATTCCA
EY935803       --> TTGATCTCGAAACCGTGTTGATAACGTCTATGTTCTGGCTCACTATTCCA
EX901320       --> TTGATCTCGAAACCGTGTTGATAACGTCTATGTTCTGGCTCACTATTCCA
FD553879       --> TTGATCTCAAAACCGTGTTGATAACGTCTATGTTCTGGCTCACTATTCCA
EY920781       --> TTGATCTCAAAACCGTGTTGATAACGTCTATGTTCTGGCTCACTATTCCA

               347    -    397
UN15994        --> GCTGCTAGACCGTATTTCGTGTTGTTTGCGCATTTGATTCCTTCCTCTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897590       <-- GCTGCTAGACCGTATTTCGTGTTGTTTGCc....................
FD559929       <-- GCTGCAAGACCGTATTTCGTGTTGTTTGCGCATTTGATTCCTTCCTCTAT
EY925515       <-- GCTGCAAGACCGTATTTCGTGTTGTTTGCGCATTTGATTCCTTCCTCTAT
FD542451       <-- GCTGCTAGACCGTATTTGGTGTTGTTTGCGCATTTGATTCCTTCCTCTAT
FY445657       <-- ..................................................
EY930379       <-- ..................................................
FY433307       <-- ..................................................
FY446658       <-- ..................................................
EY939961       <-- ..................................................
EY941630       <-- ..................................................
FD557855       <-- ..................................................
EY925267       <-- ..................................................
EW730551       --> GCTGCTAGACCGTATTTCGTGTTGTTTGCGCATTTGATTCCTTCCTCTAT
EY920976       --> GCTGCAAGACCGTATTTCGTGTTGTTTGCGCATTTGATTCCTTCCTCTAT
EY937164       --> GCTGCTAGACCGTATTTCGTGTTGTTTGCGCATTTGATTCCTTCCTCTAT
FD555561       --> GCTGCAAGACCGTATTTCGTGTTGTTTGCGCATTTGATTCCTTCCTCTAT
EY935803       --> GCTGCTAGACCGTATTTCGTGTTGTTTGCGCATTTGATTCCCTCCTCTAT
EX901320       --> GCTGCTAGACCGTATTTCGTGTTGTTTGCc....................
FD553879       --> GCTGCTAAACCGTATTTCGTGTTGTTTGCGCATTTGATTCCTTCCTCTAT
EY920781       --> GCTGCTAAACCGTATTTCGTGTTGTTTGCGCATTTGATTCCTTCCTCTAT

               397    -    447
UN15994        --> AGTCTTGAATTTCATCAAAGACATGACTGGTCCAAAGATTTCTTCTTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897590       <-- ..................................................
FD559929       <-- AGTCTTGAATTTCATCAAAGACATGACTGGTCCAAAGATTTCTTCTTTGT
EY925515       <-- AGTCTTGAATTTCATCAAAGACATGACTGGTCCAAAGATTTCTTCTTTGT
FD542451       <-- AGTCTTGAATTTCATCAAAGACATGACTGGTCCAAAGATTTCTTCTTTGT
FY445657       <-- ..................................................
EY930379       <-- ..................................................
FY433307       <-- ..................................................
FY446658       <-- ..................................................
EY939961       <-- ..................................................
EY941630       <-- ..................................................
FD557855       <-- ..................................................
EY925267       <-- ..................................................
EW730551       --> AGTCTTGAATTTCATCAAAGACATGACTGGTCCAAAGATTTCTTCTTTGT
EY920976       --> AGTCTTGAATTTCATCAAAGACATGACTGGTCCAAAGATTTCTTCTTTGT
EY937164       --> AGTCTTGAATTTCATCAAAGACATGACTGGTCCAAAGATTTCTTCTTTGT
FD555561       --> AGTCTTGAATTTCATCAAAGACATGACTGGTCCAAAGATTTCTTCTTTGT
EY935803       --> AGTCTTGAATTTCATCAAAGACATGACTGGTCCAAAGATTTCTTCTTTGT
EX901320       --> ..................................................
FD553879       --> AGTCTTGAATTTCATCAAAGACATGACTGGTCCAAAGATTTCTTCTT-GT
EY920781       --> AGTCTTGAATTTCATCAAAAACATGACTGGTCCAAAGATTTCTTCTT-GT

               447    -    497
UN15994        --> ATATCTTCATATCTTCCGTAACATCTGCGAATATAGTTGGTTCGATGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897590       <-- ..................................................
FD559929       <-- ATATCTTCATATCTTCCGTAACATCTGCGAATATAGTTGGTTCGATGAAA
EY925515       <-- ATATCTTCATATCTTCCGTAACATCTGCGAATATAGTTGGTTCGATGAAA
FD542451       <-- ATATCTTCATATCTTCCGTAACATCTGCGAATATAGTTGGTTCGATGAAA
FY445657       <-- ...............................TATAGTTGGTTCGATGAAA
EY930379       <-- ..................................................
FY433307       <-- ..................................................
FY446658       <-- ..................................................
EY939961       <-- ..................................................
EY941630       <-- ..................................................
FD557855       <-- ..................................................
EY925267       <-- ..................................................
EW730551       --> ATATCTTCATATCTTCCGTAACATCTGCGAATATAGTTGGTTCGATGAAA
EY920976       --> ATATCTTCATATCTTCCGTAACATCTGCGAATATAGTTGGTTCGATGAAA
EY937164       --> ATATCTTCATATCTTCCGTAACATCTGCGAATATAGTTGGTTCGATGAAA
FD555561       --> ATATCTTCATATCTTCCGTAACATCTGCGAATATAGTTGGTTCGATGAAA
EY935803       --> ATATCTTCATATCTTCCGTAACATCTGCGAATATAGTTGGTTCGATGAAA
EX901320       --> ..................................................
FD553879       --> ATATCTTCATATCTTCCGTAACATCTGCGAATATAGTTGGTTCGATGAAA
EY920781       --> ATATCTTCATATCTTCCGTAACATCTGCGAATATAGTTGGTTCGATGAAA

               497    -    547
UN15994        --> TATCCTTTGTCTCCAATGGCGTTCCCTCCGGTTAATAACGTAGCTCCGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897590       <-- ..................................................
FD559929       <-- TATCCTTTGTCTCCAATGGCGTTCCCTCCAGTTAATAACGTAGCTCCGTC
EY925515       <-- TATCCTTTGTCTCCAATGGCGTTCCCTCCAGTTAATAACGTAGCTCCGTC
FD542451       <-- TATCCTTTGTCTCCAATGGCGTTCCCTCCGGTTAATAACGTAGCTCCGTC
FY445657       <-- TATCCTTTGTCTCCAATGGCGTTCCCTCCAGTTAATAACGTAGCTCCGTC
EY930379       <-- ..................................................
FY433307       <-- ..................................................
FY446658       <-- ..................................................
EY939961       <-- ..................................................
EY941630       <-- ..................................................
FD557855       <-- ..................................................
EY925267       <-- ..................................................
EW730551       --> TATCCTTTGTCTCCAATGGCGTTCCCTCCGGTTAATAACGTAGCTCCGTC
EY920976       --> TATCCTTTGTCTC.....................................
EY937164       --> TATCCTTTGTCTCCAATGGCGTTCCCTCCGGTTAATAACGTAGCTCCGTC
FD555561       --> TATCCTTTGTCTCCAATGGCGTTCCCTCCAGTTAATAACGTAGCTCCGTC
EY935803       --> TATCCTTTGTCTCCAATGGCGTTCCCTCCGGTTAATAACGTAGCTCCGTC
EX901320       --> ..................................................
FD553879       --> TATCCTTTGTCTCCAATGGCGTTCCCTCCGGTTAATAACGTAACTC....
EY920781       --> TATCCTTTGTCTCCAATGGCGTTCCCTCCGGTTAATAACGT.........

               547    -    597
UN15994        --> GTTTTTGCCATGCTCAATGTAAGAGAGAATCTTCTCATATTGTTTTTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897590       <-- ..................................................
FD559929       <-- GTTTTTGCCATGCTCAATGTAAGAGAGAATCTTCTCATATTGTTTTTTAT
EY925515       <-- GTTTTTGCCATGCTCAATGTAAGAGAGAATCTTCTCATATTGTTTTTTAT
FD542451       <-- GTTTTTGCCATGCTCAATGTAAGAGAGAATCTTCTCATATTGTTTTTTAT
FY445657       <-- GTTTTTGCCATGCTCAATGTAAGAGAGAATCTTCTCATATTGTTTTTTAT
EY930379       <-- ..................................................
FY433307       <-- ..................................................
FY446658       <-- ..................................................
EY939961       <-- ..................................................
EY941630       <-- ..................................................
FD557855       <-- ..................................................
EY925267       <-- ..................................................
EW730551       --> GTTTTTGCCATGCTCAATGTAAGAGAGAATCTTCTCATATTGTTTTTTAT
EY920976       --> ..................................................
EY937164       --> GTTTTTGCCATGCTCAATGTAAGAGAGAATCTTCTCATATTGTTTTTTAT
FD555561       --> GTTTTTGCCATGCTCAATGTAAGAGAGAATCTTCTCATATTGTTTTTTAT
EY935803       --> GTTTTTGCCATGCTCAATGTAAGAGAGAATCTTCTCATATTGTTTTTTAT
EX901320       --> ..................................................
FD553879       --> ..................................................
EY920781       --> ..................................................

               597    -    647
UN15994        --> CCACTTGAGGTCCTTGTCGAGAAGTGGAATCAAAAGGGTCACCAACGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897590       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD559929       <-- CCACTTGAGGTCCTTGTCGAGAAGTGGAATCAAAAGGGTCACCAACGGTC  Raphanus raphanistrum subsp. landra
EY925515       <-- CCACTTGAGGTCCTTGTCGAGAAGTGGAATCAAAAGGGTCACCAACGGTC  Raphanus raphanistrum subsp. landra
FD542451       <-- CCACTTGAGGTCCTTGTCGAGAAGTGGAATCAAAAGGGTCACCAACTGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY445657       <-- CCACTTGAGGTCCTTGTCGAGAAGTGGAATCAAAAGGGTCACCAACGGTC  Raphanus sativus cv GSK3-1
EY930379       <-- .....................AAGTGGAATCAAAAGGGTCACCAACGGTC  Raphanus sativus var. oleiformis
FY433307       <-- ..................................................  Raphanus sativus cv GSK3-1
FY446658       <-- ..................................................  Raphanus sativus cv GSK3-1
EY939961       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY941630       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD557855       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY925267       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW730551       --> CCACTTGAGGTCCTTGTCGAGAAGTGGAATCAAAAGGGTCACCAACTGTC  Raphanus sativus cv Early Scarlet Globe
EY920976       --> ..................................................  Raphanus raphanistrum subsp. landra
EY937164       --> CCACTTGAGGTCCTTGTCGAGAAGTGGAATCAAAAGGGTCACCAACTGTC  Raphanus sativus cv Early Scarlet Globe
FD555561       --> CCACTTGAGGTCCTTGTCGAGAAGTGGAATCAAAAGGGTCACCAACGGTC  Raphanus raphanistrum subsp. landra
EY935803       --> CCACTTGAGGTCCTTGTCGAGAAGTGGAATCAAAAGGGTCACCAACTGTC  Raphanus sativus cv Early Scarlet Globe
EX901320       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD553879       --> ..................................................  Raphanus raphanistrum subsp. landra
EY920781       --> ..................................................  Raphanus raphanistrum subsp. landra

               647    -    697
UN15994        --> CAGTCTTTAGCCTTCTCCACCATCTTCGCTACAACCTTATCGTATATACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897590       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD559929       <-- CAGTCTTTAGCCTTCTCCACCATCTTCGCTACAACCTTATCGTATATACC  Raphanus raphanistrum subsp. landra
EY925515       <-- CAGTCTTTAGCCTTCTACACCATCTTCGCTACAACCTTATCGTATATACC  Raphanus raphanistrum subsp. landra
FD542451       <-- CAGTCTTTAGCCTTCTCCACCATCTTAGCTATAACCTTATCGTATATACC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY445657       <-- CAGTCTTTAGCCTTCTCCACCATCTTCGCTACAACCTTATCGTATATACC  Raphanus sativus cv GSK3-1
EY930379       <-- CAGTCTTTAGCCTTCTCCACCATTTTCGCTACAACCTTATCGTATATACC  Raphanus sativus var. oleiformis
FY433307       <-- ..................................................  Raphanus sativus cv GSK3-1
FY446658       <-- ..................................................  Raphanus sativus cv GSK3-1
EY939961       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY941630       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD557855       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY925267       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW730551       --> CAGTCTTTAGCCTTCTCCACCATCTTAGCTACAACCTTATCGTATATACC  Raphanus sativus cv Early Scarlet Globe
EY920976       --> ..................................................  Raphanus raphanistrum subsp. landra
EY937164       --> CAGTCTTTAGCCTTCTCCACCATCTTAGCTACAACCTTATCGTATATACC  Raphanus sativus cv Early Scarlet Globe
FD555561       --> CAGTCTTTAGCCTTCTCCACCATCTTCGCTACAACCTTATCGTATATACC  Raphanus raphanistrum subsp. landra
EY935803       --> CAGTCTTCAGCCTTCTCCACCATCTTAGCTACAACCTTATCGTATATACC  Raphanus sativus cv Early Scarlet Globe
EX901320       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD553879       --> ..................................................  Raphanus raphanistrum subsp. landra
EY920781       --> ..................................................  Raphanus raphanistrum subsp. landra

               697    -    747
UN15994        --> TTCTTGGACAAACACACGAGAGCTCGCCACGCAGATCTCACCCTTGTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897590       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD559929       <-- TTCTTGGACAAACACACGAGAGCTCGCCACGCAGATCTCACCCTTGTTGT  Raphanus raphanistrum subsp. landra
EY925515       <-- TTCTTGGACAAACACACGAGAGCTCGCCACGCAGATCTCACCCTTGTTGT  Raphanus raphanistrum subsp. landra
FD542451       <-- TTCTTGGACAAACACACGAGAGCTTGCCACGCAGATCTCACCCTTGTTGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY445657       <-- TTCTTGGACAAACACACGAGAGCTCGCCACGCAGATCTCACCCTTGTTGT  Raphanus sativus cv GSK3-1
EY930379       <-- TTCTTGGACAAACACACGAGAGCTCGCCACGCAGATCTCACCCTTGTTGT  Raphanus sativus var. oleiformis
FY433307       <-- ..................................................  Raphanus sativus cv GSK3-1
FY446658       <-- ..................................................  Raphanus sativus cv GSK3-1
EY939961       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY941630       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD557855       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY925267       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW730551       --> TTCTTGGACAAACACACGAG..............................  Raphanus sativus cv Early Scarlet Globe
EY920976       --> ..................................................  Raphanus raphanistrum subsp. landra
EY937164       --> TTCTTGGACAAACACACGAGAGCTTGCCACGCAGATCTCACCCTTGTTGT  Raphanus sativus cv Early Scarlet Globe
FD555561       --> TTCTTGGACAAACACACGAGAGCTCGCCACGCA.................  Raphanus raphanistrum subsp. landra
EY935803       --> TTCTTGGACAAACACACGAGAGCTTGCCACGCAGATCTCACCCTTGTTGT  Raphanus sativus cv Early Scarlet Globe
EX901320       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD553879       --> ..................................................  Raphanus raphanistrum subsp. landra
EY920781       --> ..................................................  Raphanus raphanistrum subsp. landra

               747    -    797
UN15994        --> AGAAGCAACCTAGTAGCGCAAGTTCGGCGGCTTTGTTAACATCTGCGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897590       <-- ..................................................
FD559929       <-- AGAAGCAACCTAGTAGCGCAAGTTCGGCGGCTTTGTTAACATCTGCGTCA
EY925515       <-- AGAAGCAACCTAGTAGCGCAAGTTCGGCGGCTTTGTTAACATCTGCGTCA
FD542451       <-- AGAAGCAACCTAGTAGCGCAAGATCGGCGGCTTTGTTAACATCTGCGTCA
FY445657       <-- AGAAGCAACCTAGTAGCGCAAGTTCGGCGGCTTTGTTAACATCTGCGTCA
EY930379       <-- AGAAGCAACCTAGTAGCGCAAGTTCAGCGGCTTTGTTAACATCTGCGTCA
FY433307       <-- .GAAGCAACCTAGTAGCGCAAGTTCGGCGGCTTTGTTAACATCTGCGTCA
FY446658       <-- ..................................................
EY939961       <-- ..................................................
EY941630       <-- ..................................................
FD557855       <-- ..................................................
EY925267       <-- ..................................................
EW730551       --> ..................................................
EY920976       --> ..................................................
EY937164       --> AGAAGCAACCTAGTAGCGCAAGATCGGCGGCTTTGTTAACATCTGCGTCA
FD555561       --> ..................................................
EY935803       --> AGA...............................................
EX901320       --> ..................................................
FD553879       --> ..................................................
EY920781       --> ..................................................

               797    -    847
UN15994        --> TCGAATATAAGAAGAGGCGATTTTCCTCCTAA-TTCAAGGGACACTTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897590       <-- ..................................................
FD559929       <-- TCGAATATAAGAAGAGGCGATTTTCCTCCTAA-TTCAAGTGGCACTTTCT
EY925515       <-- TCGAATATAAGAAGAGGCGATTTTCCTCCTAA-TTCAAGTGACACTTTCT
FD542451       <-- TCGAATATAAGAAGAGGCGATTTTCCTCCTAA-CTCAAGGGACACTTTCT
FY445657       <-- TCGAATATAAGAAGAGGCGATTTTCCTCCTAA-TTCAAGGGACACTTTCT
EY930379       <-- TCGAATATAAGAAGAGGCGATTTTCCTCCTAA-TTCAAGGGACACTTTCT
FY433307       <-- TCGAATATAAGAAGAGGCGATTT-CCTCCTAAATTCAAGGGACACTTTCT
FY446658       <-- ..................................................
EY939961       <-- ..................................................
EY941630       <-- ..................................................
FD557855       <-- ..................................................
EY925267       <-- ..................................................
EW730551       --> ..................................................
EY920976       --> ..................................................
EY937164       --> ..................................................
FD555561       --> ..................................................
EY935803       --> ..................................................
EX901320       --> ..................................................
FD553879       --> ..................................................
EY920781       --> ..................................................

               847    -    897
UN15994        --> TTAGATTGCTTGCTGCTGCGGCTTGCATTATCTTCCTCCCAACATCAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897590       <-- ..................................................
FD559929       <-- TTAGATT...........................................
EY925515       <-- TTAGATTGCT........................................
FD542451       <-- TTAGATTGCTTGCTGCTGCGGCTTGCATTATCTTCCTCCCAACATCAGTT
FY445657       <-- TTAGATTGCTTGCTGCTGCGGCTTGCATTATCTTCCTCCCAACATCAGTT
EY930379       <-- TTAGATTGCTTGCTGCTGCGGCTTGCATTATCTTCCTCCCAACATCAGTT
FY433307       <-- TTAGATTGCTTGCTGCTGCGGCTTGCATTATCTTCCTCCCAACATCAGTT
FY446658       <-- .......................................CAACATCAGTT
EY939961       <-- ..................................................
EY941630       <-- ..................................................
FD557855       <-- ..................................................
EY925267       <-- ..................................................
EW730551       --> ..................................................
EY920976       --> ..................................................
EY937164       --> ..................................................
FD555561       --> ..................................................
EY935803       --> ..................................................
EX901320       --> ..................................................
FD553879       --> ..................................................
EY920781       --> ..................................................

               897    -    947
UN15994        --> GATCCCGTGAAGCTGACTTTGTCAATGTCCATATGGGAGGAAATAGCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897590       <-- ..................................................
FD559929       <-- ..................................................
EY925515       <-- ..................................................
FD542451       <-- GATCCCGTGAAGCTGACTTTGTCAATGTCCATATGGGAGGAAATAGCAGC
FY445657       <-- GATCCCGTGAAGCTGACTTTGTCAATGTCCATATGGGAGGAAATAGCAGC
EY930379       <-- GATCCCGTGAAGCTGACTTTGTCAATGTCCATATGGGAGGAAATAGCAGC
FY433307       <-- GATCCCGTGAAGCTGACTTTGTCAATGTCCATATGGGAGGAAATAGCAGC
FY446658       <-- GATCCCGTGAAGCTGACTTTGTCAATGTCCATATGGGAGGAAATAGCAGC
EY939961       <-- ..............GACTTTGTCAATGTCCATATGGGAGGAAATAGCAGC
EY941630       <-- ............................CCATATGGGAGGAAATAGCAGC
FD557855       <-- ..................................................
EY925267       <-- ..................................................
EW730551       --> ..................................................
EY920976       --> ..................................................
EY937164       --> ..................................................
FD555561       --> ..................................................
EY935803       --> ..................................................
EX901320       --> ..................................................
FD553879       --> ..................................................
EY920781       --> ..................................................

               947    -    997
UN15994        --> TCCAGCAGTTGTTCCAAATCCAGTCACCACGTTGATCACGCCATCAGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897590       <-- ..................................................
FD559929       <-- ..................................................
EY925515       <-- ..................................................
FD542451       <-- TCCAGCAGTTGTTCCAAATCCAGTCACCACGTTGATCACGCCATCAGGAA
FY445657       <-- TCCAGCAGTTGTTCCAAATCCAGTCACCACGTTGATCACGCCATCAGGAA
EY930379       <-- TCCAGCAGTTGTTCCAAATCCAGTCACCACGTTGATCACGCCATCAGGAA
FY433307       <-- TCCAGCAGTTGTTCCAAATCCAGTCACCACGTTGATCACGCCATCAGGAA
FY446658       <-- TCCAGCAGTTGTTCCAAATCCAGTCACCACGTTGATCACGCCATCAGGAA
EY939961       <-- TCCTGCAGTTGTTCCAAATCCAGTCACCACGTTGATCACGCCATCAGGAA
EY941630       <-- TCT-GCAGT-GT-CCAAATCCAGTCACCACGTTGATCACGCCATCAGGAA
FD557855       <-- ..................TCCAGTCACCACGTTGATCACGCCATCAGGAA
EY925267       <-- .......................TCACCACGTTGATCACGCCATCAGGAA
EW730551       --> ..................................................
EY920976       --> ..................................................
EY937164       --> ..................................................
FD555561       --> ..................................................
EY935803       --> ..................................................
EX901320       --> ..................................................
FD553879       --> ..................................................
EY920781       --> ..................................................

               997    -   1047
UN15994        --> ATCCCGCTTCTTTCGAGAGATGCGCATAGAACAAAGCAGAGAGTGGAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897590       <-- ..................................................
FD559929       <-- ..................................................
EY925515       <-- ..................................................
FD542451       <-- ATCCCGCctgtgaatttcccc.............................
FY445657       <-- ATCCCGCTTCTTTCGAGAGATGCGCATAGAACAAAGCAGAGAGTGGAGTC
EY930379       <-- ATCCCGCctgtcc.....................................
FY433307       <-- ATCCCGCTTCTTTCGAGAGATGCGCATAGAACAAAGCAGAGAGTGGAGTC
FY446658       <-- ATCCCGCTTCTTTCGAGAGATGCGCATAGAACAAAGCAGAGAGTGGAGTC
EY939961       <-- ATCCCGCTTCTTTCGAGAGATGCGCATAGAACAAAGCAGAGAGTGGAGTC
EY941630       <-- ATCCCGCTTCTTTCGAGAGATGCGCATAGAACAAAGCAGAGAGTGGAGTC
FD557855       <-- -TCCCGCTTCTTTCGAGAGATGCGCATAGAACAAAGCAGAGAGTGGAGTT
EY925267       <-- ATCCCGCTTCTTTCGAGAGATGCGCATAGAACAAAGCAGAGAGTGGAGTT
EW730551       --> ..................................................
EY920976       --> ..................................................
EY937164       --> ..................................................
FD555561       --> ..................................................
EY935803       --> ..................................................
EX901320       --> ..................................................
FD553879       --> ..................................................
EY920781       --> ..................................................

               1047   -   1097
UN15994        --> TGCTCTGCTGGCTTGACCACCATGGTGCAACCAGCAGCTAAAGCCGGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897590       <-- ..................................................
FD559929       <-- ..................................................
EY925515       <-- ..................................................
FD542451       <-- ..................................................
FY445657       <-- TGCTCTGCTGGCTTGACCACCATGGTGCAACCAGCAGCTAAAGCCGGAGC
EY930379       <-- ..................................................
FY433307       <-- TGCTCTGCTGGCTTGACCACCATGGTGCAACCAGCAGCTAAAGCCGGAGC
FY446658       <-- TGCTCTGCTGGCTTGACCACCATGGTGCAACCAGCAGCTAAAGCCGGAGC
EY939961       <-- TGCTCTGCTGGCTTGACCACCATGGTGCAACCAGCAGCTAAAGCCGGAGC
EY941630       <-- TGCTCTGCTGGCTTGACCACCATGGTGCAACCAGCAGCTAAAGCCGGAGC
FD557855       <-- TGCTCTGCTGGCTTGACCACCATGGTGCAACCAGCAGCTAAAGCCGGAGC
EY925267       <-- TGCTCTGCTGGCTTGACCACCATGGTGCAACCAGCAGCTAAAGCCGGAGC
EW730551       --> ..................................................
EY920976       --> ..................................................
EY937164       --> ..................................................
FD555561       --> ..................................................
EY935803       --> ..................................................
EX901320       --> ..................................................
FD553879       --> ..................................................
EY920781       --> ..................................................

               1097   -   1147
UN15994        --> CACTTTCATGGCAAACATAATACTAGGAAAATTCCAAGGGATGATGTGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897590       <-- ..................................................
FD559929       <-- ..................................................
EY925515       <-- ..................................................
FD542451       <-- ..................................................
FY445657       <-- CACTTTCATGGCAAACATAATACTAGGAAAATTCCAAGGGATGATGTGAC
EY930379       <-- ..................................................
FY433307       <-- CACTTTCATGGCAAACATAATACTAGGAAAATTCCAAGGGATGATGTGAC
FY446658       <-- CACTTTCATGGCAAACATAATACTAGGAAAATTCCAAGGGATGATGTGAC
EY939961       <-- CACTTTCATGGCAAACATAATACTAGGAAAATTCCAAGGGATGATGTGAC
EY941630       <-- CACTTTCATGGCAAACATAATACTAGGAAAATTCCAAGGGATGATGTGAC
FD557855       <-- CACTTTCATGGCAAACATAGTGCTAGGAAAATTCCAAGGGATGATGTGAC
EY925267       <-- CACTTTCATGGCAAACATAGTGCTAGGAAAATTCCAAGGGATGATGTGAC
EW730551       --> ..................................................
EY920976       --> ..................................................
EY937164       --> ..................................................
FD555561       --> ..................................................
EY935803       --> ..................................................
EX901320       --> ..................................................
FD553879       --> ..................................................
EY920781       --> ..................................................

               1147   -   1197
UN15994        --> CGACCACTCCAATAGGTTCTTTAAGTGTGTATCCGAACATAGACGGACGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897590       <-- ..................................................
FD559929       <-- ..................................................
EY925515       <-- ..................................................
FD542451       <-- ..................................................
FY445657       <-- CGACCACTCCAATAGGTTCTTTAAGTGTGTATCCGAACATAGACGGACGT
EY930379       <-- ..................................................
FY433307       <-- CGACCACTCCAATAGGTTCTTTAAGTGTGTATCCGAACATAGACGGACGT
FY446658       <-- CGACCACTCCAATAGGTTCTTTAAGTGTGTATCCGAACATAGACGGACGT
EY939961       <-- CGACCACTCCAATAGGTTCTTTAAGTGTGTATCCGAACATAGACGGACGT
EY941630       <-- CGACCACTCCAATAGGTTCTTTAAGTGTGTATCCGAACATAGACGGACGT
FD557855       <-- CGACCACTCCAATAGGTTCTTTAAGTGTGTATCCGAACAAAGACGGACGT
EY925267       <-- CGACCACTCCAATAGGTTCTTTAAGTGTGTATCCGAACAAAGACGGACGT
EW730551       --> ..................................................
EY920976       --> ..................................................
EY937164       --> ..................................................
FD555561       --> ..................................................
EY935803       --> ..................................................
EX901320       --> ..................................................
FD553879       --> ..................................................
EY920781       --> ..................................................

               1197   -   1247
UN15994        --> GTCATTCTAAGTGTCTCGCCGTGGATTTTATCCGCCGCACCCGCATAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897590       <-- ..................................................
FD559929       <-- ..................................................
EY925515       <-- ..................................................
FD542451       <-- ..................................................
FY445657       <-- GTCATTCTAAGTGTCTCGCCGTGGATTTTATCCGCCGCACCCGCATAGTA
EY930379       <-- ..................................................
FY433307       <-- GTCATTCTAAGTGTCTCGCCGTGGATTTTATCCGCCGCACCCGCATAGTA
FY446658       <-- GTCATTCTAAGTGTCTCGCCGTGGATTTTATCCGCCGCACCCGCATAGTA
EY939961       <-- GTCATTCTAAGTGTCTCGCCGTGGATTTTATCCGCCGCACCCGCATAGTA
EY941630       <-- GTCATTCTAAGTGTCTCGCCGTGGATTTTATCCGCCGCACCCGCATAGTA
FD557855       <-- GTCATTCTAAGTGTCTCGCCGTGTATTTTATCCGCCGCACCCGCATAGTA
EY925267       <-- GTCATTCTAAGTGTCTCGCCGTGTATTTTATCCGCCGCACCCGCATAGTA
EW730551       --> ..................................................
EY920976       --> ..................................................
EY937164       --> ..................................................
FD555561       --> ..................................................
EY935803       --> ..................................................
EX901320       --> ..................................................
FD553879       --> ..................................................
EY920781       --> ..................................................

               1247   -   1297
UN15994        --> CCGGAAATGTCCGGCTGCGGCCGGGATGTCATTCATTTTTCCCGCATGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897590       <-- ..................................................
FD559929       <-- ..................................................
EY925515       <-- ..................................................
FD542451       <-- ..................................................
FY445657       <-- CCGGAAATGTCCGGCTGCGGCCGGGATGTCATTCATTTTTCCCGCATGGA
EY930379       <-- ..................................................
FY433307       <-- CCGGAAATGTCCGGCTGCGGCCGGGATGTCATTCATTTTTCCCGCATGGA
FY446658       <-- CCGGAAATGTCCGGCTGCGGCCGGGATGTCATTCATTTTTCCCGCATGGA
EY939961       <-- CCGGAAATGTCCGGCTGCGGCCGGGATGTCATTCATTTTTCCCGCATAGA
EY941630       <-- CCGGAAATGTCCGGCTGCGGCCGGGATGTCATTCATTTTTCCCGCATAGA
FD557855       <-- CCGGAAATGTCCGGCTGCGGCAGGAATATCATTCATTTCCCCCGCATGGA
EY925267       <-- CCGGAAATGTCCGGCTGCGGCAGGAATATCATTCATTTCCCCCGCATGGA
EW730551       --> ..................................................
EY920976       --> ..................................................
EY937164       --> ..................................................
FD555561       --> ..................................................
EY935803       --> ..................................................
EX901320       --> ..................................................
FD553879       --> ..................................................
EY920781       --> ..................................................

               1297   -   1347
UN15994        --> ACAATTTTCCGCCGTCAATCGAATCAAGAGCAGCCAATTCTTCAATGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897590       <-- ..................................................
FD559929       <-- ..................................................
EY925515       <-- ..................................................
FD542451       <-- ..................................................
FY445657       <-- ACAATTTTCCGCCGTCAATCGAATCAAGAGCAGCCAATTCTTCAAT....
EY930379       <-- ..................................................
FY433307       <-- ACAATTTTCCGCCGTCAATCGAATCAAGAGCAGCCAATTCTTCAATGTTT
FY446658       <-- ACAATTTTCCGCCGTCAATCGAATCAAGAGCAGCCAATTCTTCAATGTTT
EY939961       <-- ACAATTTTCCGCCGTCAATCGAATCAAGAGCAGCCAATTCTTCAATGTTT
EY941630       <-- ACAATTTTCCGCCGTCAATCGAATCAAGAGCAGCCAATTCTTCAATGTTT
FD557855       <-- ACAACTTTCCGCCGTCGACCGAATCAAGAGCAGCCAATTCTTCAATGTTT
EY925267       <-- ACAACTTTCCGCCGTCGACCGAATCAAGAGCAGCCAATTCTTCAATGTTT
EW730551       --> ..................................................
EY920976       --> ..................................................
EY937164       --> ..................................................
FD555561       --> ..................................................
EY935803       --> ..................................................
EX901320       --> ..................................................
FD553879       --> ..................................................
EY920781       --> ..................................................

               1347   -   1397
UN15994        --> TGCTCTATTAAGTCGGTATATTTGTTGATAATCCTTGCCCTCTCGAAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897590       <-- ..................................................
FD559929       <-- ..................................................
EY925515       <-- ..................................................
FD542451       <-- ..................................................
FY445657       <-- ..................................................
EY930379       <-- ..................................................
FY433307       <-- TGCTCTATTAAGTCGGTATATTTGTTGATAATCCTTGCCCTCTCGAAGCC
FY446658       <-- TGCTCTATTAAGTCGGTATATTTGTTGATAATCCTTGCCCTCTCGAAGCC
EY939961       <-- TGCTCTATTAAGTCGGTATATTTGTTGATAATCCTTGCCCTCTCGAAGCC
EY941630       <-- TGCTCTATTAAGTCGGTATATTTGTTGATAATCCTTGCCCTCTCGAAGCC
FD557855       <-- TGCTCTATTAAGTCGGTATATTTGTTGATAATCCTTGCCCTCTCGAAGCC
EY925267       <-- TGCTCTATTAAGTCGGTATATTTGTTGATAATCCTTGCCCTCTCGAAGCC
EW730551       --> ..................................................
EY920976       --> ..................................................
EY937164       --> ..................................................
FD555561       --> ..................................................
EY935803       --> ..................................................
EX901320       --> ..................................................
FD553879       --> ..................................................
EY920781       --> ..................................................

               1397   -   1447
UN15994        --> AGTCATGCGAGGCCAAGGACCATGATCGAAGGCGTGACGTGCAGCGTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897590       <-- ..................................................
FD559929       <-- ..................................................
EY925515       <-- ..................................................
FD542451       <-- ..................................................
FY445657       <-- ..................................................
EY930379       <-- ..................................................
FY433307       <-- AGTCATGCGAGGCCAAGGACCATGATCGAAGGCGTGACGTGCAGCGTTAA
FY446658       <-- AGTCATGCGAGGCCAAGGACCATGATCGAAGGCGTGACGTGCAGCGTTAA
EY939961       <-- AGTCATGCGAGGCCAAGGACCATGATCGAAGGCGTGACGTGCAGCGTTAA
EY941630       <-- AGTCATGCGAGGCCAAGGACCATGATCGAAGGCGTGACGTGCAGCGTTAA
FD557855       <-- AGTCATGCGAGGCCAAGGACCATGATCGAAGGCGTGACGTGCAGCGTTAA
EY925267       <-- AGTCATGCGAGGCCAAGGACCATGATCGAAGGCGTGACGTGCAGCGTTAA
EW730551       --> ..................................................
EY920976       --> ..................................................
EY937164       --> ..................................................
FD555561       --> ..................................................
EY935803       --> ..................................................
EX901320       --> ..................................................
FD553879       --> ..................................................
EY920781       --> ..................................................

               1447   -   1497
UN15994        --> CGGCCAAGTCAACGTCTTCTTTGTCTCCTGCTGCTATTTTCGCGATCACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897590       <-- ..................................................
FD559929       <-- ..................................................
EY925515       <-- ..................................................
FD542451       <-- ..................................................
FY445657       <-- ..................................................
EY930379       <-- ..................................................
FY433307       <-- CGGCCAAGTCAACGTCTTCTTTGTCTCCTGCTGCTATTTTCGCGATCACT
FY446658       <-- CGGCCAAGTCAACGTCTTCTTTGTCTCCTGCTGCTATTTTCGCGATCACT
EY939961       <-- CGGCCAAGTCAACGTCTTCTTTGTCTCCCGCTGCTATTTTCGCGATCACT
EY941630       <-- CGGCCAAGTCAACGTATTCTTTGTCTCCCGCTGCTATTTTCGCGATCACT
FD557855       <-- CGGCCAAGTCAAC-TCTTCTTTGTCTCCTGCTGCTATTTTCGCGATCACT
EY925267       <-- CGGCCAAGTCAAC-TCTTCTTTGTCTCCTGCTGCTATTTTCGCGATCACT
EW730551       --> ..................................................
EY920976       --> ..................................................
EY937164       --> ..................................................
FD555561       --> ..................................................
EY935803       --> ..................................................
EX901320       --> ..................................................
FD553879       --> ..................................................
EY920781       --> ..................................................

               1497   -   1547
UN15994        --> TCACCGTTCCTTGGGTCTATGGTTTCAAATGTTTTACCTGAAGCAGCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897590       <-- ..................................................
FD559929       <-- ..................................................
EY925515       <-- ..................................................
FD542451       <-- ..................................................
FY445657       <-- ..................................................
EY930379       <-- ..................................................
FY433307       <-- TCACCGTTCCTTGGGTCTATGGTTTCAAATGTTTTACCTGAAGCAGCATC
FY446658       <-- TCACCGTTCCTTGGGTCTATGGTTTCAAATGTTTTACCTGAAGCAGCATC
EY939961       <-- TCACCGTTCCTTGGGTCTATGGTTTCAAATGTTTTACCTGAAGCAGCATC
EY941630       <-- TCACCGTTCCTTGGGTCTATGGTTTCAAATGTTTTACCTGAAGCAGCATC
FD557855       <-- TCACCGTTCCTTGGGTCTATGGTTTCAAATGTTTTACCTGAAGCAGCATC
EY925267       <-- TCACCGTTCCTTGGGTCTATGGTTTCAAATGTTTTACCTGAAGCAGCATC
EW730551       --> ..................................................
EY920976       --> ..................................................
EY937164       --> ..................................................
FD555561       --> ..................................................
EY935803       --> ..................................................
EX901320       --> ..................................................
FD553879       --> ..................................................
EY920781       --> ..................................................

               1547   -   1597
UN15994        --> GAGGAACTGGCCGTTGATGAAAAGCTTGGTGAATTTGATCTCCGGTAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897590       <-- ..................................................
FD559929       <-- ..................................................
EY925515       <-- ..................................................
FD542451       <-- ..................................................
FY445657       <-- ..................................................
EY930379       <-- ..................................................
FY433307       <-- GAGGAACTGGCCGTTGATGAAAAGCTTGGTGAATTTGATCTCCGGTAACA
FY446658       <-- GAGGAACTGGCCGTTGATGAAAAGCTTGGTGAATTTGATCTCCGGTAACA
EY939961       <-- GAGGAACTGGCCGTTGATGAAAAGCTTGGTGAATTTGATCTCCGGTAACA
EY941630       <-- GAGGAACTGGCCGTTGATGAAAAGCTTGGTGAATTTGATCTCCGGTAACA
FD557855       <-- GAGGAACTGGCCGTTGATGAAAAGCTTGGTGAATTTGATCTCCGGTAACA
EY925267       <-- GAGGAACTGGCCGTTGATGAAAAGCTTGGTGAATTTGATCTCCGGTAACA
EW730551       --> ..................................................
EY920976       --> ..................................................
EY937164       --> ..................................................
FD555561       --> ..................................................
EY935803       --> ..................................................
EX901320       --> ..................................................
FD553879       --> ..................................................
EY920781       --> ..................................................

               1597   -   1647
UN15994        --> CCGCCGTCGCGCCTCCGTTGCATTTACCGTCTTCCATCTCTCTCCTTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX897590       <-- ..................................................
FD559929       <-- ..................................................
EY925515       <-- ..................................................
FD542451       <-- ..................................................
FY445657       <-- ..................................................
EY930379       <-- ..................................................
FY433307       <-- CCGCCGTCGCG.......................................
FY446658       <-- CCGCCGTCGCGCCTCCGTTGCATTTACCGTCTTCCATCTCTCTC......
EY939961       <-- CCGCCGTCGCGCCc....................................
EY941630       <-- CCGCCGTCGCGCCTCCGTTGCATTTACCGTCTTCCATCTCTCTCCTTTTT
FD557855       <-- CCGCCGTCGCGCCTCCGTTGCATTTACCGTCTTCCATCTCTCTCCTTTTT
EY925267       <-- CCGCCGTCGCGCCTCCGTTGCATTTACCGTCTTCCATCTCTCTCCTTTTT
EW730551       --> ..................................................
EY920976       --> ..................................................
EY937164       --> ..................................................
FD555561       --> ..................................................
EY935803       --> ..................................................
EX901320       --> ..................................................
FD553879       --> ..................................................
EY920781       --> ..................................................

               1647   -   1697
UN15994        --> CTCTCTCTCTCTCTCTGTGTTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~
EX897590       <-- ........................
FD559929       <-- ........................
EY925515       <-- ........................
FD542451       <-- ........................
FY445657       <-- ........................
EY930379       <-- ........................
FY433307       <-- ........................
FY446658       <-- ........................
EY939961       <-- ........................
EY941630       <-- CTCTCTCTCTCTCTCTGTGTTTCC
FD557855       <-- CTCTCTCTCTCTgtgtttc.....
EY925267       <-- CTCTCTCTCTCTgtgtttc.....
EW730551       --> ........................
EY920976       --> ........................
EY937164       --> ........................
FD555561       --> ........................
EY935803       --> ........................
EX901320       --> ........................
FD553879       --> ........................
EY920781       --> ........................