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Alignment for radish unigene UN16020

               1      -     51
UN16020        --> CTCAAAATTTATCATTTAATTAATTGACAACAACATTTTTACTCCCATAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534591       <-- ..................................................
EV549195       <-- ..................................................
EY913574       <-- ..................................................
EY941038       <-- ..................................................
EX750403       <-- ..................................................
EY899823       <-- ..................................................
FD530478       --> CTCAAAATTTATCATTTAATTAATTGACAACAACATTTTTACTCCCATAC
EV544720       --> ..................................................
EY909783       --> ..................................................
EY936693       --> ..................................................

               51     -    101
UN16020        --> AAAACTTTGACAACAACAATATATAGTTAATTACATTTATTTGACTATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534591       <-- ..................................................
EV549195       <-- ..................................................
EY913574       <-- ..................................................
EY941038       <-- ..................................................
EX750403       <-- ..................................................
EY899823       <-- ..................................................
FD530478       --> AAAACTTTGACAACAACAATATATAGTTAATTACATTTATTTGACTATAT
EV544720       --> ..................................................
EY909783       --> ..................................................
EY936693       --> ..................................................

               101    -    151
UN16020        --> TTTTGACGTATATTTTTGACGTAAGAATATTTACTATGACCCTTAATTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534591       <-- ..................................................
EV549195       <-- ..................................................
EY913574       <-- ..................................................
EY941038       <-- ..................................................
EX750403       <-- ..................................................
EY899823       <-- ..................................................
FD530478       --> TTTTGACGTATATTTTTGACGTAAGAATATTTACTATGACCCTTAATTTT
EV544720       --> ..................................................
EY909783       --> ..................................................
EY936693       --> ..................................................

               151    -    201
UN16020        --> TGCATCAACAAACAATTTGAACAGCTTTCATTCCAGGCAATGGTGTTTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534591       <-- ..................................................
EV549195       <-- ..................................................
EY913574       <-- ..................................................
EY941038       <-- ..................................................
EX750403       <-- ..................................................
EY899823       <-- ..................................................
FD530478       --> TGCATCAACAAACAATTTGAACAGCTTTCATTCCAGGCAATGGTGTTTAG
EV544720       --> ..................................................
EY909783       --> ..................................................
EY936693       --> ..................................................

               201    -    251
UN16020        --> GCGGCTCCTTGCTGATGGTGATCATTTAGATGAACAACATTTGAATCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534591       <-- ..................................................
EV549195       <-- ..................................................
EY913574       <-- ..................................................
EY941038       <-- ..................................................
EX750403       <-- ..................................................
EY899823       <-- ..................................................
FD530478       --> GCGGCTCCTTGCTGATGGTGATCATTTAGATGAACAACATTTGAATCAAA
EV544720       --> ..................................................
EY909783       --> ..................................................
EY936693       --> ..................................................

               251    -    301
UN16020        --> CCACACCCGTCTTATCATTTCCTGGGTGGCGCGCTGTCGCTCGCCAATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534591       <-- ..................................................
EV549195       <-- ..................................................
EY913574       <-- ..................................................
EY941038       <-- ..................................................
EX750403       <-- ..................................................
EY899823       <-- ..................................................
FD530478       --> CCACACCCGTCTTATCATTTCCTGGGTGGCGCGCTGTCGCTCGCCAATTG
EV544720       --> ..................................................
EY909783       --> ..................................................
EY936693       --> ..................................................

               301    -    351
UN16020        --> TTGTCCGACCAGCGGTTCTACCCCTGCCTCTGCTGCAGACCCTGTCGACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534591       <-- ..................................................
EV549195       <-- ..................................................
EY913574       <-- ..................................................
EY941038       <-- ..................................................
EX750403       <-- ..................................................
EY899823       <-- ..................................................
FD530478       --> TTGTCCGACCAGCGGTTCTACCCCTGCCTCTGCTGCAGACCCTGTCGACG
EV544720       --> ..................................................
EY909783       --> ..................................................
EY936693       --> ..................................................

               351    -    401
UN16020        --> TGGCTGGTTCCGTGTTGGACTGGGACTTAGCATTTTGACTCCTCTTACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534591       <-- ..................................................
EV549195       <-- ..................................................
EY913574       <-- ..................................................
EY941038       <-- ..................................................
EX750403       <-- ..................................................
EY899823       <-- ..................................................
FD530478       --> TGGCTGGTTCCGTGTTGGACTGGGACTTAGCATTTTGACTCCTCTTACAG
EV544720       --> ..................................................
EY909783       --> ..................................................
EY936693       --> ..................................................

               401    -    451
UN16020        --> AAAATAGCCGCAAACACTGATGAGACAGCCACAAAGGCAGAGGCCAACGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534591       <-- ..................................................
EV549195       <-- ..................................................
EY913574       <-- ..................................................
EY941038       <-- ..................................................
EX750403       <-- ..................................................
EY899823       <-- ..................................................
FD530478       --> AAAATAGCCGCAAACACTGATGAGACAGCCACAAAGGCAGAGGCCAACGA
EV544720       --> ..................................................
EY909783       --> ..................................................
EY936693       --> ..................................................

               451    -    501
UN16020        --> AGCGCCAAGAATGACTGGTAACTTGGCCTTGGGTTTCGCCTTCTGTGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534591       <-- ..................................................
EV549195       <-- ..................................................
EY913574       <-- ..................................................
EY941038       <-- ..................................................
EX750403       <-- ..................................................
EY899823       <-- ..................................................
FD530478       --> AGCGCCAAGAATGACTGGTAACTTGGCCTTGGGTTTCGCCTTCTGTGTTT
EV544720       --> ..................................................
EY909783       --> ..................................................
EY936693       --> ..................................................

               501    -    551
UN16020        --> GTATTGCAGCTTTCTTCGCTGCCTCGAATTTCAAACGAGCCTCTTCCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534591       <-- ..........................AATTTCAAACGAGCCTCTTCCATT
EV549195       <-- ..................................................
EY913574       <-- ..................................................
EY941038       <-- ..................................................
EX750403       <-- ..................................................
EY899823       <-- ..................................................
FD530478       --> GTATTGCAGCTTTCTTCGCTGCCTCGAATTTCAAACGAGCCTCTTCCATT
EV544720       --> ..................................................
EY909783       --> ..................................................
EY936693       --> ..................................................

               551    -    601
UN16020        --> GCTTTCTCGTTTGGTTTTGGTTTCTTTTTTTGGCGACCTTCGTTACGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534591       <-- GCTTTCTCGTTTGGTTTTGGTTTCTTTTTTTGGCGACCTTCGTTACGATC
EV549195       <-- ..................................................
EY913574       <-- ..................................................
EY941038       <-- ..................................................
EX750403       <-- ..................................................
EY899823       <-- ..................................................
FD530478       --> GCTTTCTCGTTTGGTTTTGGTTTCTTTTTTTGGCGACCTTCGTTACGATC
EV544720       --> ...............................GGCGACCTTCGTTACGATC
EY909783       --> ...............................GGCGACCTTCGTTACGATC
EY936693       --> ...............................GGCGACCTTCGTTACGATC

               601    -    651
UN16020        --> ATCAGTACTGTCGTCACCGCTTTGTCCACCTCCTCCTCCGTAATCACCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534591       <-- ATCAGTACTGTCGTCACCGCTTTGTCCACCTCCTCCTCCGTAATCACCAC
EV549195       <-- ..................................................
EY913574       <-- ..................................................
EY941038       <-- ..................................................
EX750403       <-- ..................................................
EY899823       <-- ..................................................
FD530478       --> ATCAGTACTGTCGTCACCGCTTTGTCCACCTCCTCCTCCGTAATCACCAC
EV544720       --> ATCAGTACTGTCGTCACCGCTTTGTCCACCTCCTCCTCCGTAATCACCAC
EY909783       --> ATCAGTACTGTCGTCACCGCTTTGTCCACCTCCTCCTCCGTAATCACCAC
EY936693       --> ATCAGTACTGTCGTCACCGCTTTGTCCACCTCCTCCTCCGTAATCACCAC

               651    -    701
UN16020        --> CGACAACCTTACTTATCGAATATAGCTCGATAGCGTTGACGATTGGAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534591       <-- CGACAACCTTACTTATCGAATATAGCTCGATAGCGTTGACGATTGGAGGC
EV549195       <-- ..................................................
EY913574       <-- ..................................................
EY941038       <-- ..................................................
EX750403       <-- ..................................................
EY899823       <-- ..................................................
FD530478       --> CGACAACCTTACTTATCGAATATAGCTCGATAGCGTTGACGATTGGA...
EV544720       --> CGACAACCCTACTTATCGAATATAGCTCGATAGCGTTGACGATTGGAGGC
EY909783       --> CGACAACCCTACTTATCGAATATAGCTCGATAGCGTTGACGATTGGAGGC
EY936693       --> CGACAACCTTACTTATCGAATATAGCTCGATAGCGTTGACGATTGGAGGC

               701    -    751
UN16020        --> AAAGTCGAGTCCTTGGTAGATTTAAAGCTCACCTTGGACTCCGAAGTGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534591       <-- AAAGTCGAGTCCTTGGTAGATTTAAAGCTCACCTTGGACTCCGAAGTGGC
EV549195       <-- ..................................................
EY913574       <-- ..................................................
EY941038       <-- ..................................................
EX750403       <-- ..................................................
EY899823       <-- ..................................................
FD530478       --> ..................................................
EV544720       --> AAAGTCGAGTCCTTGGTAGATTTAAAGCTCACCTTGGACTCCGAAGTGGC
EY909783       --> AAAGTCGAGTCCTTGGTAGATTTAAAGCTCACCTTGGACTCCGAAGTGGC
EY936693       --> AAAGTCGAATCCTTGGTAGATTTAAAGCTCACCTTGGACTCCGAAGTGAC

               751    -    801
UN16020        --> TACGATGTCTCTTGTGACGAACTCTGTAGCTTTCCCGAGAACCGGTACGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534591       <-- TACGATGTCTCTTGTGACGAACTCTGTAGCTTTCCCGAGAACCGGTACGA
EV549195       <-- ..................................................
EY913574       <-- ..................................................
EY941038       <-- ..................................................
EX750403       <-- ..................................................
EY899823       <-- ..................................................
FD530478       --> ..................................................
EV544720       --> TACGATGTCTCTTGTGACGAACTCTGTAGCTTTCCCGAGAACCGGTACGA
EY909783       --> TACGATGTCTCTTGTGACGAACTCTGTAGCTTTCCCGAGAACCGGTACGA
EY936693       --> TACGATGTCTCTTGTGACGAACTCTGTAGCTTTCCCGAGAACCGGTACGA

               801    -    851
UN16020        --> TGGGAACTGAATTCAGTTGTTTGTTGTCCAGAAAAACGTTGAACGACCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534591       <-- TGGGAACTGAATTCAGTTGTTTGTTGTCCAGAAAAACGTTGAACGACCGT
EV549195       <-- ..................................................
EY913574       <-- ..................................................
EY941038       <-- ..................................................
EX750403       <-- ..................................................
EY899823       <-- ..................................................
FD530478       --> ..................................................
EV544720       --> TGGGAACTGAATTCAGTTGTTTGTTGTCCAGAAAAACGTTGAACGACCGT
EY909783       --> TGGGAACTGAATTCAGTTGTTTGTTGTCCAGAAAAACGTTGAACGACCGT
EY936693       --> TGGGAACTGAATTCAGTTGTTTGTTGTCCAGAAAAACGTTGAACGACCGT

               851    -    901
UN16020        --> GTCATGGTCCGACCTA---GACTTTCGGGCTCTGAGAAGTATAGAGCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534591       <-- GTCATGGTCCGACCTACTAGACTTTCGGGCTCTGAGAAGTATAGAGCCAA
EV549195       <-- ..............TA---GACTTTCGGGCTCTGAGAAGTATAGAGCCAA
EY913574       <-- .....................................AGTATAGAGCCAA
EY941038       <-- ..................................................
EX750403       <-- ..................................................
EY899823       <-- ..................................................
FD530478       --> ..................................................
EV544720       --> GTCATGGTCCGACCTA---GACTTTCGGGCTCTGAGAAGTATAGAGCCAA
EY909783       --> GTCATGGTCCGACCTA---GACTTTCGGGCTCTGAGAAGTATAGAGCCAA
EY936693       --> GTCATGGTCCGACCTA---GACTTTCGGGCTCTGAGAAGTATAGAGTCAA

               901    -    951
UN16020        --> GTAAATCGGTCTGCCAGCTGAGGGTAAGGTTTTGTAAGAGAGTCTTATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534591       <-- GTAAATCGGTCTGCCAGCTGAGGGTAAGGTTTTGTAAGAGAGTCTTATGA
EV549195       <-- GTAAATCGGTCTGCCAGCTGAGGGTAAGGTTTTGTAAGAGAGTCTTATGA
EY913574       <-- GTAA-TCGGTCTGCCAGCTGAGGGTAAGGTTT-GT-AGAGAGTCT-ATGA
EY941038       <-- ..................................TAAGAGAGTCT-ATGA
EX750403       <-- ..................................................
EY899823       <-- ..................................................
FD530478       --> ..................................................
EV544720       --> GTAAATCGGTCTGCCAGCTGAGGGTAAGGTTTTGTAAGAGAGTCTTATGA
EY909783       --> GTAAATCGGTCTGCCAGCTGAGGGTAAGGTTTTGTAAGAAAGTCTTATGA
EY936693       --> GTAAATCGGTCTGCCAGCTGAGGGTAAGGTTTTGTAAGAAAGTCTTATGA

               951    -   1001
UN16020        --> TGTCTTGCGACAAAGCCTTTTCCATAACATTAGCGGGAGGTTTATTGGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534591       <-- TGTCTTGCGACAAAGCCTTTTCCATAACATTAGCGGGAGGTTTATTGGGC
EV549195       <-- TGTCTTGCGACAAAGCCTTTTCCATAACATTAGCGGGAGGTTTATTGGGC
EY913574       <-- TGTCT-GCGACAAAGC-TTTTCCATAACAT-AGCGGGAGGTT-ATTGGGC
EY941038       <-- TGTCT-GCGACAAAGC-TTTTCCATAACAT-AGCGGGAGGTTTATTGGGC
EX750403       <-- ..................................................
EY899823       <-- ..................................................
FD530478       --> ..................................................
EV544720       --> TGTCTTGCGACAAAGCCTTTTCCATAACATTAGCGGGAGGTTTATTGGGC
EY909783       --> TGTCTTGCGACAAAGCCTTTTCCATAACATTAGCGGGAGGTTTATTGGGC
EY936693       --> TGTCTTGCGACAAAGCCTTTTCCATAACATTAGCGGGAGGTTTATTGGGC

               1001   -   1051
UN16020        --> ACGCCAGTGATGTCAATCGATCGCGCTGAGATTTTTAACTCGCTGG-ATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534591       <-- ACGCCGGTGATGTCAATCGATCGCGCTGAGATTTTTAACTCGCTGG-ATC  Raphanus raphanistrum subsp. maritimus
EV549195       <-- ACGCCAGTGATGTCAATCGATCGCGCTGAGATTTTTAACTCGCTGGGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY913574       <-- ACGCCAGTGATGTCAATCGATCGCGCTGAGATTTT-AACTCGCTGG-ATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY941038       <-- ACGCCGGTGATGTCAATCGATCGCGCTGAGATTTT-AACTCGCTGG-ATC  Raphanus sativus cv Early Scarlet Globe
EX750403       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY899823       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD530478       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV544720       --> ACGCCAGTGATGTCAATCGATCGCGCTGAGATTTTTAACTCGCTGG-ATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909783       --> ACGCCAGTGATGTCAATCGATCGCGCTGAGATTTTTAACTCGCTGG-ATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY936693       --> ACGCCGGTGATGTCAATCGATCGCGCTGAGATTTTTAACTCGCTGG-ATC  Raphanus sativus cv Early Scarlet Globe

               1051   -   1101
UN16020        --> CTGGGTCGTCGGGTTCTAACGGG-AA-CCATAACCTACCGAATGGGTCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534591       <-- CTGGGTCGTCGGGTTCTAACGc............................
EV549195       <-- CTGGGTCGTCGGGTTCTAACGGGGAACCCATAACCTACCGAATGGGTCGC
EY913574       <-- CTGGGTCGTCGGGTTCTAACGGG-AA-CCATAACCTACCGAATGGGTCGC
EY941038       <-- CTGGGTCGTCGGGTTCTAACGGG-AA-CCATAACCTACCGAATGGGTCGC
EX750403       <-- ........................tttCCATAACCTACCGAATGGGTCGC
EY899823       <-- ..................................................
FD530478       --> ..................................................
EV544720       --> CTGGGTCGTCGGGTTCTAACGGG-AA-CCATAACCTACCGAATGGGTCGC
EY909783       --> CTGGGTCGTCGGGTTCTAACGGG-AA-CCATAACCTACCGAATGGGTCGC
EY936693       --> CTGGGTCGTCGGGTTCTAACGGG-AA-CCATAACCTACCGAATGGGTCGC

               1101   -   1151
UN16020        --> GTTCAACGTTTTTGTAACCATACGGAACTAGATTTCGGCGGATGAGAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534591       <-- ..................................................
EV549195       <-- GTTCAACGTTTTTGTAACCATACGGAACTAGATTTCGGCGGATGAGAGCT
EY913574       <-- GTTCAACGTTTTTGTAACCATACGGAACTAGATTTCGGCGGATGAGAGCT
EY941038       <-- GTTCAACGTTTTTGTAACCATACGGAACCAGATTTCGGCGGATGAGAGCT
EX750403       <-- GTTCAACGTTTTTGTAACCATACGGAACTAGATTTCGGCGGATGAGAGCT
EY899823       <-- ..................................................
FD530478       --> ..................................................
EV544720       --> GTTCAACGTTTTTGTAACCATACGGAACTAGATTTCGGCGGATGAGAGCT
EY909783       --> GTTCAACGTTTTTGTAACCATACGGAACTAGATTTCGGCGGATGAGAGCT
EY936693       --> GTTCAACGTTTTTGTAACCATACGGAACCAGATTTCGGCGGATGAGAGCT

               1151   -   1201
UN16020        --> TCGTCGGGTCCAAGATCGTCGTACATGTCAGCATCCAAACCATAAACTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534591       <-- ..................................................
EV549195       <-- TCGTCGGGTCCAAGATCGTCGTACATGTCAGCATCCAAACCATAAACTTC
EY913574       <-- TCGTCGGGTCCAAGATAGTCGTACATGTCAGCATCCAAACCAT--ACTTC
EY941038       <-- TCGTCGGGTCCAAGATCGTCGTACATGTCAGCATCCAAACCATAAACTTC
EX750403       <-- TCGTCGGGTCCAAGATCGTCGTACATGTCAGCATCCAAACCATAAACTTC
EY899823       <-- ..................................................
FD530478       --> ..................................................
EV544720       --> TCGTCGGGTCCAAGATCGTCGTACATGTCAGCATCCAAACCATAAACTTC
EY909783       --> TCGTCGGGTCCAAGATAGTCGTACATGTCAGCATCCAAACCATA--CTTC
EY936693       --> TCGTCGGG..........................................

               1201   -   1251
UN16020        --> AATGGAGGATATAAAAGGAACATCTGACACATGCGTACGG-ATTAGG-CA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534591       <-- ..................................................
EV549195       <-- AATGGAGGATATAAAAGGAACATCTGACACATGCGTACGGGATTAGGGCA
EY913574       <-- AATGGAGGATATAAAAGGAACATCTGACACATGCGTACGG-ATTAGG-CA
EY941038       <-- AATGGAGGATATAAAAGGAACATCTGACACATGCGTACGG-ATTAGG-CA
EX750403       <-- AATGGAGGATATAAAAGGAACATCTGACACATGCGTACGG-ATTAGG-CA
EY899823       <-- ..................................................
FD530478       --> ..................................................
EV544720       --> AATGGAGGATATAAAAGGAACATCTGACACATGCGTACGG-ATTAGG-CA
EY909783       --> AATGGAGGATATAAAAGGAACATCTGACACATGCGTACGG-ATTAGG-CA
EY936693       --> ..................................................

               1251   -   1301
UN16020        --> AACGCTGATACTCTCACTCGCAGGGAGAATATATCACCTTCCGATATAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534591       <-- ..................................................
EV549195       <-- AACGCTGATACTCTCACTCGCAGGGAGAATATATCACCTTCCGATATAAA
EY913574       <-- AACGCTGATACTCTCACTCGCAGG-AGAATATATCACCT-CCGGTATAAA
EY941038       <-- AACGCTGATACTCTCACTCGCAGG-AGAATATATCACCT-CCGATATAAA
EX750403       <-- AACGCTGATACTCTCACTCGCAGG-AGAATATATCACCT-CCGATATAAA
EY899823       <-- ..................................................
FD530478       --> ..................................................
EV544720       --> AACGCTGATACTCTCACTCGCAGG-AGAATATATCACCT-CCGATATAAA
EY909783       --> AACGCTGATACTCTCACTC...............................
EY936693       --> ..................................................

               1301   -   1351
UN16020        --> AATCGCCCTTGTTATTGAGCTTCGGTGAAACAGTAAAATTCAACTGTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534591       <-- ..................................................
EV549195       <-- AATCGCCCTTGTTATTGAGCTTCGGTGAAACAGTAAAATTCAACTGTGTC
EY913574       <-- AATCGCC-TTGTTATTGAGCTTCGGTGAAACAGTAAA-TTCAACTGTGTC
EY941038       <-- AATCGCC-TTGTTATTGAGCTTCGGTGAAACAGTAAA-TTCAACTGTGTC
EX750403       <-- AATCGCC-TTGTTATTGAGCTTCGGTGAAACAGTAAA-TTCAACTGTGTC
EY899823       <-- ..................................................
FD530478       --> ..................................................
EV544720       --> AATCGCC-TTGTTATTGAGCTTCGGTGAAACAGTAAA-TTCAACTGTGTC
EY909783       --> ..................................................
EY936693       --> ..................................................

               1351   -   1401
UN16020        --> ACGGTGTTTCTCGTCGTAAACAACGTCGAAAGAGGGCGCCAAGGGATTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534591       <-- ..................................................
EV549195       <-- ACGGTGTTTCTCGTCGTAAACAACGTCGAAAGAGGGCGCCAAGGGATTTT
EY913574       <-- ACGGTGTTTCTCGTCGTAAACAACGTCGAAAGAGGGCGCCAAGG-ATTTT
EY941038       <-- ACGGTGTTTCTCGTCGTAAACAATGTCGAAAGAGGGCGCCAAGG-ATTTT
EX750403       <-- ACGGTGTTTCTCGTCGTAAACAACGTCGAAAGAGGGCGCCAAGG-ATTTT
EY899823       <-- ..................................................
FD530478       --> ..................................................
EV544720       --> ACGGTGTTTCTCGTCGTAAACAACGTCGAAAGAGGGCGCCAAGG-ATTTT
EY909783       --> ..................................................
EY936693       --> ..................................................

               1401   -   1451
UN16020        --> TCGTCGTAGTTCCCGTAGAAAAACATTGTTCTAACAAGTGTTTTACGGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534591       <-- ..................................................
EV549195       <-- TCGTCGTAGTTCCCGTAGAAAAACATTGTTCTAACAAGTGTTTTACGGCC
EY913574       <-- TCGTCGTAGTTCCCGTAGAAAAACATTGTTCTAACAAGTGTTTTACGGCC
EY941038       <-- TCGTCGTAGTTCCCGTAGAAAAACATTGTTCTAACAAGTGTTTTACGGCC
EX750403       <-- TCGTCGTAGTTCCCGTAGAAAAACATTGTTCTAACAAGTGTTTTACGGCC
EY899823       <-- .......................CATTGTTCTAACAAGTGTTTTACGGCC
FD530478       --> ..................................................
EV544720       --> TCGTCGTAGTTCCCGTAG................................
EY909783       --> ..................................................
EY936693       --> ..................................................

               1451   -   1501
UN16020        --> TCTTGTCGCCGGAATGTTGCTATAGCAATTTTT---ATTTTTTGAGGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534591       <-- ..................................................
EV549195       <-- TCTTGTCGCCGGAATGTTGCTATAGCAATTTTT---ATTTTTTGAGGGAA
EY913574       <-- TCTTGTCGCCGGAATGTTGCTATAGCAATTTTT---ATTTTTTGAGGGAA
EY941038       <-- TCTTGTCGCCGGAATGTTGCTATAGCAATTTTTTTTATTTTTTGAGGGAA
EX750403       <-- TCTTGTCGCCGGAATGTTGCTATAGCAATTTTTTTTATTTTTTGAGGGAA
EY899823       <-- TCTTGTCGCCGGAATGTTGCTATAGCAATTTTTTTTATTTTTTGAGGGAA
FD530478       --> ..................................................
EV544720       --> ..................................................
EY909783       --> ..................................................
EY936693       --> ..................................................

               1501   -   1551
UN16020        --> AGAACCGGAGGGTGTTGAGCGGCTTCGTCCGTTTAGTCTCGAGTGACTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534591       <-- ..................................................
EV549195       <-- AGAACCGGAGGGTGTTGAGAGGCTTCGTCCGTTTAGTCTCGAGTGACTTA
EY913574       <-- AGAACCGGAGGGTGTTGAGCGGCTTCGTCCGTTTAGTCTCGAGTGACTTA
EY941038       <-- AGAACCGGAGGGTGTTGAGCGGCTTCGTCCGTTTAGTCTCGAGTGACTTA
EX750403       <-- ATAACCGGAGGGTGTTGAGCGGCTTCGTCCGTTTAGTCTCGAGTGACTTA
EY899823       <-- ATAACCGGAGGGTGTTGAGCGGCTTCGTCCGTTTAGTCTCGAGTGACTTA
FD530478       --> ..................................................
EV544720       --> ..................................................
EY909783       --> ..................................................
EY936693       --> ..................................................

               1551   -   1601
UN16020        --> CCGCTGGTGGTGAAGTCTTTGTCTCCGATCCATTTTACATTGTAGGAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534591       <-- ..................................................
EV549195       <-- CCACTGGTGGTGAAGTCTTTGTCTCC........................
EY913574       <-- CCACTGGTGGTGAAGTCTTTGTCTCCGATCCATTTTACATTGTAGGAGTC
EY941038       <-- CCGCTGGTGGTGAAGTCTTTGTCTCCGATCCATTTTACATTGTAGGAGTC
EX750403       <-- CCGCTGGTGGTGAAGTCTTTGTCTCCGATCCATTTTACATTGTAGGAGTC
EY899823       <-- CCGCTGGTGGTGAAGTCTTTGTCTCCGATCCATTTTACATTGTAGGAGTC
FD530478       --> ..................................................
EV544720       --> ..................................................
EY909783       --> ..................................................
EY936693       --> ..................................................

               1601   -   1651
UN16020        --> CAAGTAGGATTCCGATGCTCCACAGTCGATGTTTATATATTCTGAGAGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534591       <-- ..................................................
EV549195       <-- ..................................................
EY913574       <-- CAAGTAGGATTCCGATGCTCCACAGTCGATGTTTATATATTCTGAGAGGG
EY941038       <-- CAAGTAGGATTCCGATGCTCCACAGTCGATGTTTATATATTCTGAGAGGG
EX750403       <-- CAAGTAGGATTCCGATGCTCCACAGTCGATGTTTATATATTCTGAGAGGG
EY899823       <-- CAAGTAGGATTCCGATGCTCCACAGTCGATGTTTATATATTCTGAGAGGG
FD530478       --> ..................................................
EV544720       --> ..................................................
EY909783       --> ..................................................
EY936693       --> ..................................................

               1651   -   1701
UN16020        --> AAAGGATTGGGGAGGAGAGAGACAGGAGAGTGAGAAGAAGAAGCACTGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD534591       <-- ..................................................
EV549195       <-- ..................................................
EY913574       <-- AAAGGATTGGGGAGGAGAGAGACAGGAGAGTGAGAAGAAGAAGCACTGCC
EY941038       <-- AAAGGATTGGGGAGGAGAGAGACAGGAGAGTGAGAAGAAGAAGCACTGCC
EX750403       <-- AAAGGATTGGGGAGGAGAGAGACAGGAGAGTGAGAAGAAGAAGCACTGCC
EY899823       <-- AAAGGATTGGGGAGGAGAGAGACAGGAGAGTGAGAAGAGGAAGCACTGCC
FD530478       --> ..................................................
EV544720       --> ..................................................
EY909783       --> ..................................................
EY936693       --> ..................................................

               1701   -   1751
UN16020        --> ATGATCAACATTCAACCC
                   ~~~~~~~~~~~~~~~~~~
FD534591       <-- ..................
EV549195       <-- ..................
EY913574       <-- ATGATCAACATTCAACCC
EY941038       <-- ATGGTCAACATTCAACCC
EX750403       <-- ATGATCAACATTCAACCC
EY899823       <-- ATGATCAACATTCAACCC
FD530478       --> ..................
EV544720       --> ..................
EY909783       --> ..................
EY936693       --> ..................