Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN16027

               1      -     51
UN16027        --> AATTACGAAAAAAATAATATTAACCATCGGAGATGCTCTAATAGTATCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- ..................................................
EV549062       <-- ..................................................
FD549817       <-- ..................................................
FD946529       <-- ..................................................
EY930679       <-- ..................................................
FD954521       <-- ..................................................
EV544614       --> AATTACGAAAAAAATAATATTAACCATCGGAGATGCTCTAATAGTATCAA
FD937376       --> ....gtGAAAAAAATAATATTAACCATCGGAGATGCTCTAATAGTATCAA
EY927985       --> .....................AACCATCGGAAATGC-CTAATAGTATCAA
FD950764       --> ...................tcAACCATCAAAAATGCTCTAATAGTATCAA
FD545841       --> ..........................................cGTATCAA
FD942636       --> ..................................................
EY926822       --> ..................................................

               51     -    101
UN16027        --> ACAAAAGTGTTGTTTGCGTAATTCAACCTCATTGACGATCAATGAACTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- ..................................................
EV549062       <-- ..................................................
FD549817       <-- ..................................................
FD946529       <-- ..................................................
EY930679       <-- ..................................................
FD954521       <-- ..................................................
EV544614       --> AGAAAAGTGTTGTTTGCGTAATTCAACCTCATTGACGATCAATGAACTCA
FD937376       --> ACAAAAGTGTTGTTTGCGTAATTCAACCTCATTGACGATCAATGAACTCA
EY927985       --> ACAAAAGTGTTGTTTGCGTAATTCAACCTCATTGACGATCAATGAACTCA
FD950764       --> ACAAAAGTGTTGTTTGCGTAATTCAACCTCATTGACGATCAATGAACTCA
FD545841       --> AAAAAAGTGTTGTTTGCGTAATTCAACCTCATTGACGATCAATGAACTCA
FD942636       --> ..AAAAGTGTTGTTTGCGTAATTCAACCTCATTGACGATCAATGAACTCA
EY926822       --> ...............cCGTAATTCAACCTCATTGACGATCAATGAACTCA

               101    -    151
UN16027        --> ATTCTTTGATATTTCTACGATCATAAACCAACAAAAAACAAACATACAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- ..................................................
EV549062       <-- ..................................................
FD549817       <-- ..................................................
FD946529       <-- ..................................................
EY930679       <-- ..................................................
FD954521       <-- ..................................................
EV544614       --> ATTCTTTGATATTTCTACGATCATAAACCAACAAAAAACAAACATACAAT
FD937376       --> ATTCTTTGATATTTCTACGATCATAAACCAACAAAAAACAAACATACAAT
EY927985       --> ATTCTTTGATATTTCTACGATCATAAACCAACAAAAAACAAACATACAAT
FD950764       --> ATGCTTTGATATTTCTACGATCGCAAACCAACAAAAAACAAACATACAAT
FD545841       --> ATTCTTTGATATTTCTACGATCATAAACCAACAAAAAACAAACATACAAT
FD942636       --> ATTCTTTGATATTTCTACAATCATAAACCAACAAAAAACAAACATACAAT
EY926822       --> ATGCTTTGATATTTCTACGATCGCAAACCAACAAAAAACAAACATACAAT

               151    -    201
UN16027        --> AAAATACTTATTCTTGACTGTCCTCGCGGCAAA-TACTCTAATGAAAA-T
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- ..................................................
EV549062       <-- ..................................................
FD549817       <-- ..................................................
FD946529       <-- ..................................................
EY930679       <-- ..................................................
FD954521       <-- ..................................................
EV544614       --> AAAATACTTATTCTTGACTGTCCTCGCGGCAAA-TACTCTAATGAAAA-T
FD937376       --> AAAATACTTATTCTTGACTGTCCTCGCGGCAAAATACTCTAATGAAAA-T
EY927985       --> AAAATACTTATTCTTGACTGTCCTCGCGGCAAAATACTCTAATGAAAA-T
FD950764       --> AAAATACCTATTCTCGACTGTCCTCGCGGCAAA-TACTCTAATGAAAA-T
FD545841       --> AAAATACTTATTCTTGACTGTCCTCGCGGCAAA-TACTCTAATGAAAA-T
FD942636       --> AAAATACTTATTCTTCACTGTCCTCGCGGCAAA-TACTCTGATGAAAAAT
EY926822       --> AAAATACCTATTCTCGACTGTCCTCGCGGCAAA-TACTCTAATGAAAA-T

               201    -    251
UN16027        --> TTGAGTC-GAGAGTGGAAAAAGTTGAAGTGGGAAC--CACCTTTACTCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- ............................................ACTCTA
EV549062       <-- ..................................................
FD549817       <-- ..................................................
FD946529       <-- ..................................................
EY930679       <-- ..................................................
FD954521       <-- ..................................................
EV544614       --> TTGAGTC-GAGAGTGGAAAAAGTTGAAGTGGGAAC--CACCTTTACTCTA
FD937376       --> TTGAGTC-GAGAGTGGAAAAAGTTGAAGTGGGAAC--CACCTTTACTCTA
EY927985       --> TTGAGTC-GAGAGTGGAAAAAGTTGAAGTGGGAAC--CACCTTTACTCTA
FD950764       --> TTGAGTCAAAAAGTGGAAAAAGTTGAAGTGGGAACACCACCTTTACTCTA
FD545841       --> TTGAGTC-GAGAGTGGAAAAAGTTGAAGTGGGAAC--CACCTTTACTCTA
FD942636       --> TTGAGTCACAGAGTGGAAAAAGTTGAAGTGGGAAC--CACCTTTACTCTA
EY926822       --> TTGAGTCAAAGAGTGGAAAAAGTTGAAGTGGGAACACCACCTTTACTCTA

               251    -    301
UN16027        --> CTTGACAGGGACGCAAAAGGAAGAACTGAGAAGTGGAGGCAAAACGCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- CTTGACAGGGACGCAAAAGGAAGAACTGAGAAGTGGAGGCAAAACGCACA
EV549062       <-- ..................................................
FD549817       <-- ..................................................
FD946529       <-- ..................................................
EY930679       <-- ..................................................
FD954521       <-- ..................................................
EV544614       --> CTTGACAGGGACGCAAAAGGAAGAACTGAGAAGTGGAGGCAAAACGCACA
FD937376       --> CTTGACAGGGACGCAAAAGGAAGAACTGAGAAGTGGAGGCAAAACGCACA
EY927985       --> CTTGACAGGGACGCAAAAGGAAAAACTGAAAAGTGGAGGCAAAACGCACA
FD950764       --> CTTGACAGGGACGCAAAAGGAAAAACTGAAAAGTGGAGGCAAAACGCACA
FD545841       --> CTTGACAGGGACGCAAAAGGAAAAACTGAAAAGTGGAGGCAAAACGCACA
FD942636       --> CTTGACAGGGACCCAAAAGGAAGAACTGAGAAGTGGAGGCAAAACGCACA
EY926822       --> CTTGACAGGGACGCAAAAGGAAGAACTGAAAAGTGGAGGCAAAACGCACA

               301    -    351
UN16027        --> CTAAGTGAGGACCCGGTGGATTGCTGCTTACATTTGCTTCTTCCACGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- CTAAGTGAGGACCCGGTGGATTGCTGCTTACATTTGCTTCTTCCACGTTT
EV549062       <-- ..................................................
FD549817       <-- ..................................................
FD946529       <-- ..................................................
EY930679       <-- ..................................................
FD954521       <-- ..................................................
EV544614       --> CTAAGTGAGGACCCGGTGGATTGCTGCTTACATTTGCTTCTTCCACGTTT
FD937376       --> CTAAGTGAGGACCCGGTGGATTGCTGCTTACATTTGCTTCTTCCACGTTT
EY927985       --> CTAAGTGAGGACCCGGTGGATTGCTGCTTACATTTGCTTCTTCCACGTTT
FD950764       --> CTAAGTGAGGACCCGGTGGATTGCTGCTTACATTTGCTTCTTCCACGTTT
FD545841       --> CTAAGTGAGGACCCGGTGGATTGCTGCTTACATTTGCTTCTTCCACGTTT
FD942636       --> CTAAGTGAGGACCCGGTGGATTGCTGCTTACATTTGCTTCTTCCACGTTT
EY926822       --> CTAAGTGAGGACCCGGTGGATTGCTGCTTACATTTGCTTCTTCCACGTTT

               351    -    401
UN16027        --> GGCAAACCCAGCTGAGGAGGACGGACATAACCCGCAACTAATGGAACACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- GGCAAACCCAGCTGAGGAGGACGGACATAACCCGCAACTAATGGAACACA
EV549062       <-- ..................................................
FD549817       <-- ..................................................
FD946529       <-- ..................................................
EY930679       <-- ..................................................
FD954521       <-- ..................................................
EV544614       --> GGCAAACCCAGCTGAGGAGGACGGACATAACCCGCAACTAATGGAACACA
FD937376       --> GGCAAACCCAGCTGAGGAGGACGGACATAACCCGCAACTAATGGAACACA
EY927985       --> GGCAAACCCAGCTGAGGAGGACGGACATAACCCGCAACTAATGGAACACA
FD950764       --> GGCAAACCTAGCTGAGGAGGACGGACATAACCCGCAACTAATGGAACACA
FD545841       --> GGCAAACCCAGCTGAGGAGGACGGACATAACCCGCAACTAATGGAACACA
FD942636       --> GGCAAACCTAGCTGAGGAGGACGGACATAACCCGCAACTAATGGAACACA
EY926822       --> GGCAAACCTAGCTGAGGAGGACGGACATAACCCGCAACTAATGGAACACA

               401    -    451
UN16027        --> TAGTATCGATATTACCACTCTTGAACCTTGCTCCTCTGAGAGAGAGACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- TAGTATCGATATTACCACTCTTGAACCTTGCTCCTCTGAGAGAGAGACAT
EV549062       <-- ...............................TCCTGTGAGAGAGAGACAT
FD549817       <-- ....................................TGAGAGAGAGACAT
FD946529       <-- ..................................................
EY930679       <-- ..................................................
FD954521       <-- ..................................................
EV544614       --> CAGTATCGATATTACCACTCTTGAACCTTGCTCCTCTGAGAGAGAGACAT
FD937376       --> TAGTATCGATATTACCACTCTTGAACCTTGCTCCTCTGAGAGAGAGACAT
EY927985       --> TAGTATCGATATTACCACTCTTGAACCTTGCTCCTCTGAAAAAGAGACAT
FD950764       --> CAGTATCGATATTACCACTCTTGAACCTTGCTCCTCTGAAAGAGAGACAT
FD545841       --> CAGTATCGATATTACCACTCTTGAACCTTGCTCCTCTGA...........
FD942636       --> TAGTATCGATATTACCACTCTTGAACCTTGCTCCTCTGAGAGGGAGACAT
EY926822       --> CAGTATCGATATTACCACTCTTGAACCTTGCTCCTCTGAAAGAGAGACAT

               451    -    501
UN16027        --> AACCTCTCTTCCTACCCGCGATCATCCAGTTCTCCGAATTTGCATTGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- AACCTCTCTTCCTACCCGCGATCATCCAGTTCTCCGAATTTGCATTGACT
EV549062       <-- AACCTCTCTTCCTACCCGCGATCATCCAGTTCTCCGAATTTGCATTGACT
FD549817       <-- AACCTCTCTTCCTACCCGCGATCATCCAGTTCTCCGAATTTGCATTGACT
FD946529       <-- ..................................................
EY930679       <-- ..................................................
FD954521       <-- ..................................................
EV544614       --> AACCTCTCTTCCTACCCGCGATCATCCAGTTCTCCGAATTTGCATTGACT
FD937376       --> AACCTCTCTTCCTACCCGCGATCATCCAGTTCTCCGAATTTGCATTGACT
EY927985       --> AACCTCTCTTCCTACCCGCGATCATCCAGTTCTCCGAATTTGCATTGACT
FD950764       --> AACCTCTCTTCCTACCCGCAATCATCCAGTTCTCCGAATTTGCATTGACT
FD545841       --> ..................................................
FD942636       --> AACCTCTCTTCCTACCCGCAATCATCCAGTTCTCCGAATTTGCATTGACT
EY926822       --> AACCTCTCTTCCTACCCGCAATCATCCAGTTCTCCGAATTTGCATTGACT

               501    -    551
UN16027        --> TCGTATAATACCTCATCTTGTTGCTGTTCTATGGCTTCACTTCCCTTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- TCGTATAATACCTCATCTTGTTGCTGTTCTATGGCTTCACTTCCCTTGAG
EV549062       <-- TCGTATAATACCTCATCTTGTTGCTGTTCTATGGCTTCACTTCCCTTGAG
FD549817       <-- TCGTATAATACCTCATCTTGTTGCTGTTCTATGGCTTCACTTCCCTTGAG
FD946529       <-- ..................................................
EY930679       <-- ..................................................
FD954521       <-- ..................................................
EV544614       --> TCGTATAATACCTCATCTTGTTGCTGTTCTATGGCTTCACTTCCCTTGAG
FD937376       --> TCGTATAATACCTCATCTTGTTGCTGTTCTATGGCTTCACTTCCCTTGAG
EY927985       --> TCGTATAGTACCTCATCTTGTTGCTGTTCTATGGCTTCACTTCCCTTGAG
FD950764       --> TCGTATAATACCTCATCTTGTTGCTGTTCTATGGCTTCACTTCCCTTGAG
FD545841       --> ..................................................
FD942636       --> TCGTATAATACCTCATCTTGTTGCTGTTCAATGGCTTCACTTCCCTTG..
EY926822       --> TCGTATAATACCTCATCTTGTTGCTGTTCTATGGCTTCACTTCCCTTGAG

               551    -    601
UN16027        --> CTCTTTCAGCCTTTCGACTCTCCACTGCATGGTAATAAGTTTCCCGACCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- CTCTTTCAGCCTTTCGACCCTCCACTGCATGGTAATAAGTTTCCCGACCC
EV549062       <-- CTCTTTCAGCCTTTCGACTCTCCACTGCATGGTAATAAGTTTCCCGACCC
FD549817       <-- CTCTTTCAGCCTTTCGACTCTCCACTGCATGGTAATAAGTTTCCCGACCC
FD946529       <-- ..............CGACTCTCCACTGCATGGTAATAAGTTTCCCGACCC
EY930679       <-- ..................................................
FD954521       <-- ..................................................
EV544614       --> CTCTTTCAGCCTTTCGACTCTCCACTGCATGGTAATAAGTTTCCCGACCC
FD937376       --> CTCTTTCAGCCTTTCGACCCTCCACTGCATGGTAATAAGTTTCCCGACCC
EY927985       --> CTCTTTCAGCCTTTCGACTCTCCACTGCATGGTAATAAGTTTCCCGACCC
FD950764       --> CTCTTTCAGCCTTTCGACTCTCCACTGCATGGTAATAAGTTTCCCGACCC
FD545841       --> ..................................................
FD942636       --> ..................................................
EY926822       --> CTCTTTCAGCCTTTCGACTCTCCACTGCATGGTAATAAGTTTCCCGACCC

               601    -    651
UN16027        --> TAAGACCATCGGAAGGAAGTGGGAGGAATCCAACTGTCAGACAAGGATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- TAAGACCATCGGAAGGAAGTGGGAGGAATTCAACTGTCAGACAAGGATCA
EV549062       <-- TAAGACCATCGGAAGGAAGTGGGAGGAATCCAACTGTCAGACAAGGATCA
FD549817       <-- TAAGACCATCGGAAGGAAGTGGGAGGAATCCAACTGTCAGACAAGGATCA
FD946529       <-- TAAGACCATCGGAAGGAAGTGGGAGGAATCCAACTGTCAGACAAGGATCA
EY930679       <-- ..................................................
FD954521       <-- ..................................................
EV544614       --> TAAGACCATCGGAAGGAAGTGGGAGGAATCCAACTGTCAGACAAGGATCA
FD937376       --> TAAGACCATCGGAAGGAAGTGGGAGGAATTCAACTGTCAGACAAGGATCA
EY927985       --> TAAGACCATCG.......................................
FD950764       --> TA................................................
FD545841       --> ..................................................
FD942636       --> ..................................................
EY926822       --> TAAGACCATCGGAAGGAAGTGGGAGGAATCCAACTGTCAGACAAGGATCA

               651    -    701
UN16027        --> AGCACTGGACGCTGCAAAACAATAGCACTCTTGAACACCAAATCTTTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- AGCACTGGACGCTGCAAAACAATAGCACTCTTGAACACCAAATCTTTCCT
EV549062       <-- AGCACTGGACGCTGCAAAACAATAGCACTCTTGAACACCAAATCTTTCCT
FD549817       <-- AGCACTGGACGCTGCAAAACAATAGCACTCTTGAACACCAAATCTTTCCT
FD946529       <-- AGCACTGGACGCTGCAAAACAATAGCACTCTTGAACACCAAATCTTTCCT
EY930679       <-- ..................................................
FD954521       <-- ..................................................
EV544614       --> AGCACTGGACGCTGCAAAACAATAGCACTCTTGAACACCAAATCTTTCCT
FD937376       --> AGCACTGGACGCTGCAAAACAATAGCACTCTTGAACACCAAATCTT....
EY927985       --> ..................................................
FD950764       --> ..................................................
FD545841       --> ..................................................
FD942636       --> ..................................................
EY926822       --> AGCACTGGACGCTGCAAAACAATAGCACTCTTGAACACCAAATCTCTCCT

               701    -    751
UN16027        --> TTCAGCATCATCTCCAGAGTGATCTGCATCCACCGGTTTGTGTGCTCCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- TTCAGCATCAGTTTCAGAATAATCTGCATCCACTGGTTTGTGTGCTCCAG  Raphanus sativus var. oleiformis
EV549062       <-- TTCAGCATCATCTCCAGAGTGATCTACATCCACCGGTTTGTGTGCTCCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD549817       <-- TTCAGCATCATCTCCAGAGTGATATACATCCACCGGTTTGTGTGATCCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD946529       <-- TTCAGCATCAGCTCCAGAGTGATCTGCATCCACCGGTTTGTGTGCTCCAG  Raphanus sativus cv Early Scarlet Globe
EY930679       <-- ..................................................  Raphanus sativus var. oleiformis
FD954521       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV544614       --> TTCAGCATCATCTCCAGAGTGATCTACATCCACCGGTTTGTGTGCTCCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD937376       --> ..................................................  Raphanus sativus var. oleiformis
EY927985       --> ..................................................  Raphanus sativus var. oleiformis
FD950764       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD545841       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD942636       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY926822       --> TTCAGCATCAGTTCCAGAGTGATCTGCATCCACCGGTTTGTGTGCT....  Raphanus sativus var. oleiformis

               751    -    801
UN16027        --> CAGCTCTATCACCATGGATTTCATATTTGATATTCAGAATGCTCTCT---
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- CGGCTCTATCACCATGGATTTCATATTTGATATTCAGAATGCTCTCT---
EV549062       <-- CAGCTCTATCACCATGGATTTCATATTTGATATTCAGAATGCTCTCT---
FD549817       <-- CAGCTCTATCACCATGGATTTCATATTTGATATTCAGAATGCTCTCT---
FD946529       <-- CAGCTCTATCACCATGGATTTCATATTTGATATTCAGAATGCTCTCTTCT
EY930679       <-- ...............atgaTTCATATTTGATATTCAGAATGCTCTCT---
FD954521       <-- ..................................................
EV544614       --> CAGCTCTATCACCATGGATTTCATATTTGATATTCAGAATGCTCTCT---
FD937376       --> ..................................................
EY927985       --> ..................................................
FD950764       --> ..................................................
FD545841       --> ..................................................
FD942636       --> ..................................................
EY926822       --> ..................................................

               801    -    851
UN16027        --> GGTACCTGCAAATCTTTCCCTGATGGCATTGTCTTCTCTAGGGATATACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- GGTACCCGCAAATCTTTCCCTGATGACATTGTCTTCTCTAGGGATATACT
EV549062       <-- GGTACCTGCAAATCTTTCCCTGATGGCATTGTCTTCTCTAGGGATATACT
FD549817       <-- GGTACCTGCAAATCTTTCCCTGATGGCATTGTCTTCTCTAGGGATATACT
FD946529       <-- GGTACCTGCAAATCTTTCCCTGATGGAATCGTCTTCTCTAGGGATATACT
EY930679       <-- GGTACCTGCAAATCTTTTCCTGATGGAATTGTCTTCTCTATGGATATACT
FD954521       <-- ..................................................
EV544614       --> GGTACCTGCAAATCTTTCCCTGATGGCATTGTCTTCTCTAGGGATATACT
FD937376       --> ..................................................
EY927985       --> ..................................................
FD950764       --> ..................................................
FD545841       --> ..................................................
FD942636       --> ..................................................
EY926822       --> ..................................................

               851    -    901
UN16027        --> GAACACGACTGCTGCTCTAGATCCCGGTGACACAACAAGGGGAAAGAACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- GAACACGACTGCCGCTCTAGATCCCGGTGACACAACAAGGGGAAAGAAtg
EV549062       <-- GAACACGACTGCTGCCCTAGATCCCGGTGACACAACAAGGGGAAAGAACG
FD549817       <-- GAACACGACTGCTGCTCTAGATCCCGGTGACACAACAAGGGGAAAGAACG
FD946529       <-- GAACACGACTGCTGCTCTAGATCCCGGTGACACAACAAGGGGAAAGAACG
EY930679       <-- GAACACGACTGCTGCTCTAGATCCCGGTGACACAACAAGGGGAAAGAACG
FD954521       <-- ..................................................
EV544614       --> GAACACGACTGCTGCc..................................
FD937376       --> ..................................................
EY927985       --> ..................................................
FD950764       --> ..................................................
FD545841       --> ..................................................
FD942636       --> ..................................................
EY926822       --> ..................................................

               901    -    951
UN16027        --> TTGAAGTTGGTCTTCCATCACTTTTTCCATGTACAAATCCATCTTGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- tcc...............................................
EV549062       <-- TCGAAGTTGGTCTTCCATCACTTTTTCCATGTACAAATCCATCTTGAAGA
FD549817       <-- TCGAAGTTGGTCTTCCATCACTTTTTCCATGTACAAATCCATCTTGAAGA
FD946529       <-- TTGAAGTTGGTCTTCCATCACc............................
EY930679       <-- TTGCAGTTGGTCTTCCATCACTTTTTCCATGTACAAATCCATCTTGAAGA
FD954521       <-- ..................................................
EV544614       --> ..................................................
FD937376       --> ..................................................
EY927985       --> ..................................................
FD950764       --> ..................................................
FD545841       --> ..................................................
FD942636       --> ..................................................
EY926822       --> ..................................................

               951    -   1001
UN16027        --> TCAAGCCAAGCATCAAGAACTATCAAGTTGGCCTTGACAAGGGAGTGTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- ..................................................
EV549062       <-- TCAAGCCAAGCATCAAGAACTATCAAGTTGGCCTTGACAAGGGAGTGTAG
FD549817       <-- TCAAGCCAAGCATCAAGAACTATCAAGTTGGCCTTGACAAGGGAGTGTAG
FD946529       <-- ..................................................
EY930679       <-- TCAAGCCAAGCATTAAGAACTATCAAGTTGGCCTTGACAAGGGAGTGTAG
FD954521       <-- ..................................................
EV544614       --> ..................................................
FD937376       --> ..................................................
EY927985       --> ..................................................
FD950764       --> ..................................................
FD545841       --> ..................................................
FD942636       --> ..................................................
EY926822       --> ..................................................

               1001   -   1051
UN16027        --> CATAACCTGCAAGACCAATGTGCCATCATTGCATTTGTTTGCCACCCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- ..................................................
EV549062       <-- CATAACCTGCAAGACCAATGTGCCATCATTGCATTTGTTTGCCACCCTTG
FD549817       <-- CATAACCTGCAAGACCAATGTGCCATCATTGCATTTGTTTGCCACCCTTG
FD946529       <-- ..................................................
EY930679       <-- CATAACCTGCAAGACCAACGTGCCATCATTGCATTTGTTTGCCACCCTTG
FD954521       <-- ..................................................
EV544614       --> ..................................................
FD937376       --> ..................................................
EY927985       --> ..................................................
FD950764       --> ..................................................
FD545841       --> ..................................................
FD942636       --> ..................................................
EY926822       --> ..................................................

               1051   -   1101
UN16027        --> TAGTCACGTCAAAAGGGTCGGTAAAATGTGCAGCTATCGTTCTCTCAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- ..................................................
EV549062       <-- TAGTCACGTCAAAAGGGTCGGTAAAATGTGCAGCTATCGTTCTCTCAAAT
FD549817       <-- TAGTCACGTCAAAAGGGTCGGTAAAATGTGCAGCTATCGTTCTCTCAAAT
FD946529       <-- ..................................................
EY930679       <-- TAGTCACGTCAAAAGGGTCGGTAAAATGTGCAGCTATCGTTCTCTCAAAT
FD954521       <-- ..................................................
EV544614       --> ..................................................
FD937376       --> ..................................................
EY927985       --> ..................................................
FD950764       --> ..................................................
FD545841       --> ..................................................
FD942636       --> ..................................................
EY926822       --> ..................................................

               1101   -   1151
UN16027        --> ATCTGGTTATGATGCACCCCAAATTCAAGTTTCAGAGCCACAGTTCTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- ..................................................
EV549062       <-- ATCTGGTTATGATGCACCCCAAATTCAAGTTTCAGAGCCACAGTTCTCAT
FD549817       <-- c.................................................
FD946529       <-- ..................................................
EY930679       <-- ATCTAGTTATGATGCACCCCAAATTCAAGTTTCAGAGCCACAGTTCTCAT
FD954521       <-- ..................................................
EV544614       --> ..................................................
FD937376       --> ..................................................
EY927985       --> ..................................................
FD950764       --> ..................................................
FD545841       --> ..................................................
FD942636       --> ..................................................
EY926822       --> ..................................................

               1151   -   1201
UN16027        --> TCCCTCTAAAATATCTTGTTTCAGCGGAGTGACTGAAGATGAACCTCTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- ..................................................
EV549062       <-- TCCC..............................................
FD549817       <-- ..................................................
FD946529       <-- ..................................................
EY930679       <-- TCCCTCTAAAATATCTTGTTTCAGCGGAGTGACTGAAGATGAACCTCTAG
FD954521       <-- ..................................................
EV544614       --> ..................................................
FD937376       --> ..................................................
EY927985       --> ..................................................
FD950764       --> ..................................................
FD545841       --> ..................................................
FD942636       --> ..................................................
EY926822       --> ..................................................

               1201   -   1251
UN16027        --> CAAGCTTCTCACTCAATGCACGAACAGGGACCCAGAGAATAGAACTCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- ..................................................
EV549062       <-- ..................................................
FD549817       <-- ..................................................
FD946529       <-- ..................................................
EY930679       <-- CAAGCTTCTCACTCAATGCACGAACAGGGACCCAGAGAATAGAACTCACA
FD954521       <-- ..................................................
EV544614       --> ..................................................
FD937376       --> ..................................................
EY927985       --> ..................................................
FD950764       --> ..................................................
FD545841       --> ..................................................
FD942636       --> ..................................................
EY926822       --> ..................................................

               1251   -   1301
UN16027        --> TTGCTTGCCCATTCTGAGAAAACTATTTTCCCGTCGCAGAGATTAAGGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- ..................................................
EV549062       <-- ..................................................
FD549817       <-- ..................................................
FD946529       <-- ..................................................
EY930679       <-- TTGCTTGCCCATTCTGAGAAAACTATTTTCCCGTCGCAGAGATTAAGGAC
FD954521       <-- ..................................................
EV544614       --> ..................................................
FD937376       --> ..................................................
EY927985       --> ..................................................
FD950764       --> ..................................................
FD545841       --> ..................................................
FD942636       --> ..................................................
EY926822       --> ..................................................

               1301   -   1351
UN16027        --> CTCTGAATCACGTTTTGGAGAGACAGGGCTATCTTCTTCAGAAGCTTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- ..................................................
EV549062       <-- ..................................................
FD549817       <-- ..................................................
FD946529       <-- ..................................................
EY930679       <-- CTCTGAATCACGTTTTGGAGAGACAGGGCTATCTTCTTCAGAAGCTTCAG
FD954521       <-- ....GAATCACGTTT-GGAGAGACAGGGCTATCTTCTTCAGAAGCTTCAG
EV544614       --> ..................................................
FD937376       --> ..................................................
EY927985       --> ..................................................
FD950764       --> ..................................................
FD545841       --> ..................................................
FD942636       --> ..................................................
EY926822       --> ..................................................

               1351   -   1401
UN16027        --> CTTTTGTTGCACCAGCATCGCAATCTGTTTCCACGTATCTCTCCATCTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- ..................................................
EV549062       <-- ..................................................
FD549817       <-- ..................................................
FD946529       <-- ..................................................
EY930679       <-- CTTTTGTTGCACCAGCATCGCAATCTGTTTCCACGTATCTCTCCATCTCG
FD954521       <-- CTTTTGTTGCACCAGCATCGCAATCTGTTTCCACGTATCTCTCCATCTCG
EV544614       --> ..................................................
FD937376       --> ..................................................
EY927985       --> ..................................................
FD950764       --> ..................................................
FD545841       --> ..................................................
FD942636       --> ..................................................
EY926822       --> ..................................................

               1401   -   1451
UN16027        --> ATGCCGTATGAGTCTTCAATCTTTAGCCCCGGACCAGTATCAATGTGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- ..................................................
EV549062       <-- ..................................................
FD549817       <-- ..................................................
FD946529       <-- ..................................................
EY930679       <-- ATGCCGTATGAGTCTTCAATCTTTAGCC......................
FD954521       <-- ATGCCGTATGAGTCTTCAATCTTTAGCCCCGGACCAGTATCAATGTGCAA
EV544614       --> ..................................................
FD937376       --> ..................................................
EY927985       --> ..................................................
FD950764       --> ..................................................
FD545841       --> ..................................................
FD942636       --> ..................................................
EY926822       --> ..................................................

               1451   -   1501
UN16027        --> GATGGCGCCTTTCAGTGAGTAATTAATAGGACGCACAATGACACCAATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- ..................................................
EV549062       <-- ..................................................
FD549817       <-- ..................................................
FD946529       <-- ..................................................
EY930679       <-- ..................................................
FD954521       <-- GATGGCGCCTTTCAGTGAGTAATTAATAGGACGCACAATGACACCAATCC
EV544614       --> ..................................................
FD937376       --> ..................................................
EY927985       --> ..................................................
FD950764       --> ..................................................
FD545841       --> ..................................................
FD942636       --> ..................................................
EY926822       --> ..................................................

               1501   -   1551
UN16027        --> ACTGGGCTTCATTTATAAGCAGCGCAGAAGATACAGCTGAAGAAAGATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- ..................................................
EV549062       <-- ..................................................
FD549817       <-- ..................................................
FD946529       <-- ..................................................
EY930679       <-- ..................................................
FD954521       <-- ACTGGGCTTCATTTATAAGCAGCGCAGAAGATACAGCTGAAGAAAGATCA
EV544614       --> ..................................................
FD937376       --> ..................................................
EY927985       --> ..................................................
FD950764       --> ..................................................
FD545841       --> ..................................................
FD942636       --> ..................................................
EY926822       --> ..................................................

               1551   -   1601
UN16027        --> ACCAGAGCTCTTGGTTTGGACACCTTCAAGATAGGTCTGGTTGGCTTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- ..................................................
EV549062       <-- ..................................................
FD549817       <-- ..................................................
FD946529       <-- ..................................................
EY930679       <-- ..................................................
FD954521       <-- ACCAGAGCTCTTGGTTTGGACACCTTCAAGATAGGTCTGGTTGGCTTTTC
EV544614       --> ..................................................
FD937376       --> ..................................................
EY927985       --> ..................................................
FD950764       --> ..................................................
FD545841       --> ..................................................
FD942636       --> ..................................................
EY926822       --> ..................................................

               1601   -   1651
UN16027        --> ATAACTCATAAAATCATCACTTTCTCCAGGACCACCCTTTGAAAAGCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- ..................................................
EV549062       <-- ..................................................
FD549817       <-- ..................................................
FD946529       <-- ..................................................
EY930679       <-- ..................................................
FD954521       <-- ATAACTCATAAAATCATCACTTTCTCCAGGACCACCCTTTGAAAAGCTGT
EV544614       --> ..................................................
FD937376       --> ..................................................
EY927985       --> ..................................................
FD950764       --> ..................................................
FD545841       --> ..................................................
FD942636       --> ..................................................
EY926822       --> ..................................................

               1651   -   1701
UN16027        --> GAGACCTGAATCTCAAGCGACCAATCTGGCCAGTGACGACTCCCAAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- ..................................................
EV549062       <-- ..................................................
FD549817       <-- ..................................................
FD946529       <-- ..................................................
EY930679       <-- ..................................................
FD954521       <-- GAGACCTGAATCTCAAGCGACCAATCTGGCCAGTGACGACTCCCAAAACA
EV544614       --> ..................................................
FD937376       --> ..................................................
EY927985       --> ..................................................
FD950764       --> ..................................................
FD545841       --> ..................................................
FD942636       --> ..................................................
EY926822       --> ..................................................

               1701   -   1751
UN16027        --> TAGGAACCGGGTTTTTGTGGCGGCAAATCAAATGTGATAGTATTCTTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- ..................................................
EV549062       <-- ..................................................
FD549817       <-- ..................................................
FD946529       <-- ..................................................
EY930679       <-- ..................................................
FD954521       <-- TAGGAACCGGGTTTTTGTGGCGGCAAATCAAATGTGATAGTATTCTTTCC
EV544614       --> ..................................................
FD937376       --> ..................................................
EY927985       --> ..................................................
FD950764       --> ..................................................
FD545841       --> ..................................................
FD942636       --> ..................................................
EY926822       --> ..................................................

               1751   -   1801
UN16027        --> GGGCTTTAGTACAGTTGCAGCTGAACTCTTCAAAGCCTGGCCGCCTTCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- ..................................................
EV549062       <-- ..................................................
FD549817       <-- ..................................................
FD946529       <-- ..................................................
EY930679       <-- ..................................................
FD954521       <-- GGGCTTTAGTACAGTTGCAGCTGAACTCTTCAAAGCCTGGCCGCCTTCGT
EV544614       --> ..................................................
FD937376       --> ..................................................
EY927985       --> ..................................................
FD950764       --> ..................................................
FD545841       --> ..................................................
FD942636       --> ..................................................
EY926822       --> ..................................................

               1801   -   1851
UN16027        --> CAGTGTTGTTAGTGGCTACCAAGGTAAGACTAAGTGAATCAAGGGTGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- ..................................................
EV549062       <-- ..................................................
FD549817       <-- ..................................................
FD946529       <-- ..................................................
EY930679       <-- ..................................................
FD954521       <-- CAGTGTTGTTAGTGGCTACCAAGGTAAGACTAAGTGAATCAAGGGTGATA
EV544614       --> ..................................................
FD937376       --> ..................................................
EY927985       --> ..................................................
FD950764       --> ..................................................
FD545841       --> ..................................................
FD942636       --> ..................................................
EY926822       --> ..................................................

               1851   -   1901
UN16027        --> TCATCAGGAAAGCCACTCCACACAGTAACAGATAGATTCCCAGGGTCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- ..................................................
EV549062       <-- ..................................................
FD549817       <-- ..................................................
FD946529       <-- ..................................................
EY930679       <-- ..................................................
FD954521       <-- TCATCAGGAAAGCCACTCCACACAGTAACAGATAGATTCCCAGGGTCTCC
EV544614       --> ..................................................
FD937376       --> ..................................................
EY927985       --> ..................................................
FD950764       --> ..................................................
FD545841       --> ..................................................
FD942636       --> ..................................................
EY926822       --> ..................................................

               1901   -   1951
UN16027        --> ATCACTCAACTGAAGAGGAGGACCAGTATTTCCAGAAAATGTTATCAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- ..................................................
EV549062       <-- ..................................................
FD549817       <-- ..................................................
FD946529       <-- ..................................................
EY930679       <-- ..................................................
FD954521       <-- ATCACTCAACTGAAGAGGAGGACCAGTATTTCCAGAAAATGTTATCAATG
EV544614       --> ..................................................
FD937376       --> ..................................................
EY927985       --> ..................................................
FD950764       --> ..................................................
FD545841       --> ..................................................
FD942636       --> ..................................................
EY926822       --> ..................................................

               1951   -   2001
UN16027        --> ATGACACATCTAAGGGAACTGGGTTCTTCATTTCACTGTGTGCAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941827       <-- ...............................................
EV549062       <-- ...............................................
FD549817       <-- ...............................................
FD946529       <-- ...............................................
EY930679       <-- ...............................................
FD954521       <-- ATGACACATCTAAGGGAACTGGGTTCTTCATTTCACTGTGTGCAATC
EV544614       --> ...............................................
FD937376       --> ...............................................
EY927985       --> ...............................................
FD950764       --> ...............................................
FD545841       --> ...............................................
FD942636       --> ...............................................
EY926822       --> ...............................................