RadishBase

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Alignment for radish unigene UN16040

               1      -     51
UN16040        --> CCCTCTTTTCTTGTTTCTTTTTGCTCCCAATCACTCTTCAGATTCCGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531898       <-- ..................................................
EW737213       <-- ..................................................
EY927067       <-- ..................................................
EY934543       <-- ..................................................
FD546862       <-- ..................................................
FD934318       <-- ..................................................
FD953580       <-- ..................................................
EY936852       <-- ..................................................
EW732784       --> CCCTCTTTTCTTGTTTCTTTTTGCTCCCAATCACTCTTCAGATTCCGGAA
FD957988       --> .................TTTTTGCTCCCAATCACTCTTCAGATTCCGGAA
EY938388       --> .....................................ggAGATTCCGGAA
FD557758       --> .....................................ggAGATTCCGGAA
EY941227       --> .........................................gtgCCGGAA
EY931012       --> ...........................................gagattc
FD550974       --> ..................................................
FD937768       --> ..................................................
EV527718       --> ..................................................

               51     -    101
UN16040        --> AAAAAAAA-GGAAAAGAAAAGAAAGATTCTTCTGTTCTGTCATAAAAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531898       <-- ..................................................
EW737213       <-- ..................................................
EY927067       <-- ..................................................
EY934543       <-- ..................................................
FD546862       <-- ..................................................
FD934318       <-- ..................................................
FD953580       <-- ..................................................
EY936852       <-- ..................................................
EW732784       --> AAAAAAA--GGAAAAGAAAAGAAAGATTCTTCTGTTCTGTCATAAAAGAT
FD957988       --> AAAAAAAA-GGAAAAGAAAAGAAAGATTCTTCTGTTCTGTCATAAAAGAT
EY938388       --> AAAAAAAAAGGAAAAGAAAAGAAAGATTCTTCTGTTCTGTCATAAAAGAT
FD557758       --> AAAAAAA---GAAAAGAAAAGAAAGATTCTTCTGT-----CATAAAAGAT
EY941227       --> AAAAAAAA-GGAAAAGAAAAGAAAGATTCTTCTGTTCTGTCATAAAAGAT
EY931012       --> cggAAAAA-AGAAAAGAAAAGAAAGATTCTTCTGTTCTGTCATAAAAAAT
FD550974       --> .......ggGGAAAAGAAAAGAAAGATTCTTCTGTTCTGTCATAAAAGAT
FD937768       --> ......................ggGATTCTTCTGTTCTGTCATAAAAAAT
EV527718       --> ..................................................

               101    -    151
UN16040        --> GAATTCGCCGAATTGGGAACTCCGGGGCTGCTGTAATCGGAACCAGAACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531898       <-- ..................................................
EW737213       <-- ..................................................
EY927067       <-- ..................................................
EY934543       <-- ..................................................
FD546862       <-- ..................................................
FD934318       <-- ..................................................
FD953580       <-- ..................................................
EY936852       <-- ..................................................
EW732784       --> GAATTCGCCGAATTGGGAGCTCCGGGGCTGCTGTAATCGGAACCAGAATG
FD957988       --> GAATTCGCCGAATTGGGAACTCCGGGGCTGCTGTAATCGGAACCAGAATG
EY938388       --> GAATTCGCCGAATTGGGAACTCCGGGGCTGCTGTAATCGGAACCAGAACG
FD557758       --> GAATTCGCCGAATTGGGAACTCCGAGGCTGCTGTAATCGGAACCAGAACG
EY941227       --> GAATTCGCCGAATTGGGAACTCCGGGGCTGCTGTAATCGGAACCAGAACG
EY931012       --> GAACTCGCCGAATTGGGAACTCCAGGGCTGCTGTAATCGGAACCAGAACG
FD550974       --> GAATTCGCCGAATTGGGAACTCCGGGGCTGCTGTAATCGGAACCAGAACG
FD937768       --> GAACTCGCCGAATTGGGAACTCCAGGGCTGCTGTAATCGGAACCAGAACG
EV527718       --> ............ggGGGAACTCCGAGGCTGCTGTAATCGGAACCAGGACG

               151    -    201
UN16040        --> CGTTCCTCATCACCATCGGAATCTTCACCGTCGTTATCCTTCTGCTATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531898       <-- ..........................................TGCTATGG
EW737213       <-- ..................................................
EY927067       <-- ..................................................
EY934543       <-- ..................................................
FD546862       <-- ..................................................
FD934318       <-- ..................................................
FD953580       <-- ..................................................
EY936852       <-- ..................................................
EW732784       --> CGTTCCTCATCACCATCGGAATCTTCACCGTCGTTATCTTTCTGCTATGG
FD957988       --> CGTTCCTCATCACCATCGGAATCTTCACCGTCGTTATCCTTCTGCTATGG
EY938388       --> CGTTCCTCATCACCATCGGAATCTTCACCGTCGTTATCCTTCTGCTATGG
FD557758       --> CGTTCCTCATCACCATCGGAATCTTCACCGTCGTTATCCTTCTGCTATGG
EY941227       --> CGTTCCTCATCACCATCGGAATCTTCACCGTCGTTATCCTTCTGCTATGG
EY931012       --> CGTTCCTCATCACCATCGGAATCTTCACCGTCGTTATCCTTCTGCTATGG
FD550974       --> CGTTCCTCATCACCATCGGAATCTTCACCTTCGTTATCCTTCTGCTATGG
FD937768       --> CGTTCCTCATCACCATCGGAATCTTCACCGTCGTTATCCTTCTGCTATGG
EV527718       --> CGTTCCTCATCACCATCGGAATCTTCACCGTCGTTATCCTTCTGCTATGG

               201    -    251
UN16040        --> AGGACATTCCTGTTGACTCCGTTTAAACTAATCACGGTGTTTCTTCACGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531898       <-- AGGACATTCCTGTTGACTCCGTTTAAACTAATAACGGTGTTTCTTCACGA
EW737213       <-- ...ACATTCCTGTTGACTCCGTTTAAACTAATCACGGTGTTTCTTCACGA
EY927067       <-- .........................................ttTTCACGA
EY934543       <-- ..................................................
FD546862       <-- ..................................................
FD934318       <-- ..................................................
FD953580       <-- ..................................................
EY936852       <-- ..................................................
EW732784       --> AGGACATTCCTGTTGACTCCGTTTAAACTAATCACGGTGTTTCTTCACGA
FD957988       --> AGGACATTCCTGTTGACTCCGTTTAAACTAATCACGGTGTTTCTTCACGA
EY938388       --> AGGACATTCCTGTTGACTCCGTTTAAACTAATCACGGTGTTTCTTCACGA
FD557758       --> AGGACATTCCTGTTGACTCCGTTTAAACTAATAACGGTGTTTCTTCACGA
EY941227       --> AGGACATTCCTGTTGACTCCGTTTAAACTAATCACGGTGTTTCTTCACGA
EY931012       --> AGGACATTCCTGTTGACTCCGTTTAAACTAATCACGGTGTTTCTTCACGA
FD550974       --> AGGACATTCCTGTTGACTCCGTTTAAACTAATCACGGTGTTTCTTCACGA
FD937768       --> AGGACATTCTTGTTTACTCCGTTTAAACTAATCACGGTGTTTCTTCGCGA
EV527718       --> AGGACATTCCTGTTGACTCCGTTTAAACTAATAACGGTGTTTCTTCACGA

               251    -    301
UN16040        --> AGCCAGTCATGCTGTTGCTTGCAAGCTTACTTGTGGTGATGTGGAAGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531898       <-- AGCCAGTCATGCTGTTGCTTTCAAGCTTACTTGTGATGATGTGGAGGGGA  Raphanus raphanistrum subsp. maritimus
EW737213       <-- AGCCAGTCATGCTGTTGCTTGCAAGCTTACTTGTGGTGATGTGGAAGGGA  Raphanus sativus cv Rat-Tail Radish #3870
EY927067       <-- AGCCAGTCATGCTGTTGCTTGCAAGCTTACTTGTGGTGATGTGGAAGGGA  Raphanus sativus var. oleiformis
EY934543       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD546862       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD934318       <-- ..................................................  Raphanus sativus var. oleiformis
FD953580       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY936852       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW732784       --> AGCCAGTCATGCTGTTGCTTGCAAGCTTACTTGTGGTGATGTGGAAGGGA  Raphanus sativus cv Rat-Tail Radish #3870
FD957988       --> AGCCAGTCATGCTGTTGCTTGCAAGCTTACTTGTGGTGATGTGGAAGGGA  Raphanus sativus cv Rat-Tail Radish #3870
EY938388       --> AGCCAGTCATGCTGTTGCTTGCAAGCTTACTTGTGGTGATGTGGAAGGGA  Raphanus sativus cv Early Scarlet Globe
FD557758       --> AGCCAGTCATGCTGTTGCTTGCAAGCTTACTTGTGGTGATGTGGAGGGGA  Raphanus raphanistrum subsp. landra
EY941227       --> AGCCAGTCATGCTGTTGCTTGCAAGCTTACTTGTGGTGATGTGGAAGGGA  Raphanus sativus cv Early Scarlet Globe
EY931012       --> AGCCAGTCATGCTGTTGCTTGCAAGCTTACTTGTGGTGATGTGGAAGGGA  Raphanus sativus var. oleiformis
FD550974       --> AGCCAGTCATGCTGTTGTTTGCAAGCTTACTTGTGGTGATGTGGAAGGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD937768       --> AGCCAGTCATGCTGTTGCTTGCAAGCTTACTTGTGGTGATGTGGAGGGGA  Raphanus sativus var. oleiformis
EV527718       --> AGCCAGTCATGCTGTTGCTTTCAAGCTTACTTGTGATGATGTGGAGGGGA  Raphanus raphanistrum subsp. maritimus

               301    -    351
UN16040        --> TGGAGGTGAATGCAAATGAAGGAGGTTCTACAACAACACGTGGTGGCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531898       <-- TGGAGGTGAATGCAAATGAAGGAGGTTCTACAACAACACGTGGTGGCATT
EW737213       <-- TGGAGGTGAATGCAAATGAAGGAGGTTCTACAACAACACGTGGTGGCATT
EY927067       <-- TGGAGGTGAATGCAAATGAAGGAGGTTCTACAACAACACGTGGTGGCATT
EY934543       <-- ..........TGCAAATGAAGGAGGTTCTACAACAACACGTGGTGGCATT
FD546862       <-- .............................ACAACAACACGTGGTGGCATT
FD934318       <-- ..................................................
FD953580       <-- ..................................................
EY936852       <-- ..................................................
EW732784       --> TGGAGGTGAATGCAAATGAAGGAGGTTCTACAACAACACGTGGTGGCATT
FD957988       --> TGGAGGTGAATGCAAATGAAGGAGGTTCTACAACAACACGTGGTGGCATT
EY938388       --> TGGAGGTGAATGCAAATGAAGGAGGTTCTACAACAACACGTGGTGGCATT
FD557758       --> TGGAGGTGAATGCAAATGAAGGAGGTTCTACAACAACACGTGGTGGCATT
EY941227       --> TGGAGGTGAATGCAAATGAAGGAGGTTCTACAACAACACGTGGTGGCATT
EY931012       --> TGGAGGTGAATGCAAATGAAGGAGGTTCTACAACAACACGTGGTGGCATT
FD550974       --> TGGAGGTGAATGCAAATGAAGGAGGTTCTACAACAACACGTGGTGGCATT
FD937768       --> TGGAGGTGAATGCAAATGAAGGAGGTTCTACAACAACACGTGGTGGCATT
EV527718       --> TGGAGGTGAATGCAAATGAAGGAGGTTCTACAACAACACGTGGTGGCATT

               351    -    401
UN16040        --> TATTGGCTGATCTTGCCTGCTGGCTATCTTGGCTCATCATTTTGGGGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531898       <-- TATTGGCTGATCTTGCCTGCTGGCTATCTTGGCTCATCATTTTGGGGAAT
EW737213       <-- TATTGGCTGATCTTGCCTGCTGGCTATCTTGGCTCATCATTTTGGGGAAT
EY927067       <-- TATTGGCTGATCTTGCCTGCTGGCTATCTTGG-TCATCATTTTGGGGAAT
EY934543       <-- TATTGGCTGATCTTGCCTGCTGGCTATCTTGGCTCATCATTTTGGGGAAT
FD546862       <-- TATTGGCTGATCTTGCCTGCTGGCTATCTTGGCTCATCATTTTGGGGAAT
FD934318       <-- ..................................................
FD953580       <-- ..................................................
EY936852       <-- ..................................................
EW732784       --> TATTGGCTGATCTTGCCTGCTGGCTATCTTGGCTCATCATTTTGGGGAAT
FD957988       --> TATTGGCTGATCTTGCCTGCTGGCTATCTTGGCTCATCATTTTGGGGAAT
EY938388       --> TATTGGCTGATCTTGCCTGCTGGCTATCTTGGCTCATCATTTTGGGGAAT
FD557758       --> TATTGGCTGATCTTGCCTGCTGGCTATCTTGGCTCATCATTTTGGGGAAT
EY941227       --> TATTGGCTGATCTTGCCTGCTGGCTATCTTGGCTCATCATTTTGGGGAAT
EY931012       --> TATTGGCTGATCTTGCCTGCTGGCTATCTTGG-TCATCATTTTGGGGAAT
FD550974       --> TATTGGCTGATCTTGCCTGCTGGCTATCTTGGCTCATCATTTTGGGGAAT
FD937768       --> TATTGGCTGATCTTGCCTGCTGGCTATCTTGGCTCATCATTTTGGGGAAT
EV527718       --> TATTGGCTGATCTTGCCTGCTGGCTATCTTGGCTCATCATTTTGGGGAAT

               401    -    451
UN16040        --> GGCTTTGATTCTTGCATCTACTAATCTGCTTACAGCAAGAATAGCTGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531898       <-- GGCTTTGATTCTTGCATCTACTAATCTTCTTACAGCAAGAATAGCTGCTG  Raphanus raphanistrum subsp. maritimus
EW737213       <-- GGCTTTGATTCTTGCATCTACTAATCTGCTTACAGCAAGAATAGCTGCTG  Raphanus sativus cv Rat-Tail Radish #3870
EY927067       <-- GGCTTTGATTCTTGCATCTACTAATCTGCTTACAGCAAGAATAGCTGCTG  Raphanus sativus var. oleiformis
EY934543       <-- GGCTTTGATTCTTGCATCTACTAATCTGCTTACAGCAAGAATAGCTGCTG  Raphanus sativus cv Early Scarlet Globe
FD546862       <-- GGCTTTGATTCTTGCATCTACTAATCTGCTTACAGCAAGAATAGCTGCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD934318       <-- .......................ATCTTCTTACAGCAAGAATAGCTGCTG  Raphanus sativus var. oleiformis
FD953580       <-- ..........................TGCTTACAGCAAGAATAGCTGCTG  Raphanus sativus cv Rat-Tail Radish #3870
EY936852       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW732784       --> GGCTTTGATTCTTGCATCTACTAATCTGCTTACAGCAAGAATAGCTGCTG  Raphanus sativus cv Rat-Tail Radish #3870
FD957988       --> GGCTTTGATTCTTGCATCTACTAATCTGCTTACAGCAAGAATAGCTGCTG  Raphanus sativus cv Rat-Tail Radish #3870
EY938388       --> GGCTTTGATTCTTGCATCTACTAATCTGCTTACAGCAAGAATAGCTGCTG  Raphanus sativus cv Early Scarlet Globe
FD557758       --> GGCTTTGATTCTTGCATCTACTAATCTTCTTACAGCAAGAATAGCTGCTG  Raphanus raphanistrum subsp. landra
EY941227       --> GGCTTTGATTCTTGCATCTACTAATCTGCTTACAGCAAGAATAGCTGCTG  Raphanus sativus cv Early Scarlet Globe
EY931012       --> GGCTTTGATTCTTGCATCTACTAATCTGCTTACAGCAAGAATAGCTGCTG  Raphanus sativus var. oleiformis
FD550974       --> GGCTTTGATTCTTGCATCTACTAATCTGCTTACAGCAAGAATAGCTGCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD937768       --> GGCTTTGATTCTTGCATCTACTAATCTTCTTACAGCAAGAATAGCTGCTG  Raphanus sativus var. oleiformis
EV527718       --> GGCTTTGATTCTTGCATCTACTAATCTTCTTACAGCAAGAATAGCTGCTG  Raphanus raphanistrum subsp. maritimus

               451    -    501
UN16040        --> CTGGTCTGGGTCTTGCTTTATTCATCGTCCTCTTCATTGCCAAAAACTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531898       <-- CTGGTCTGGGTCTTGCTTTATTCATCGTCCTCTTCATTGCCAAAAATTGG
EW737213       <-- CTGGTCTGGGTCTTGCTTTATTCATCGTCCTCTTCATTGCCAAAAACTGG
EY927067       <-- CTGGTCTGGGTCTTGCTTTATTCATCGTCCTCTTCATTGCCAAAAACTGG
EY934543       <-- CTGGTCTGGGTCTTGCTTTATTCATCGTCCTCTTCATTGCCAAAAACTGG
FD546862       <-- CTGGTCTGGGTCTTGCTTTATTCATCGTCCTCTTCATTGCCAAAAACTGG
FD934318       <-- CTGGTCTGGGTCTTGCTTTATTCATCGTCCTCTTCATTGCCAAAAACTGG
FD953580       <-- CTGGTCTGGGTCTTGCTTTATTCATCGTCCTCTTCATTGCCAAAAACTGG
EY936852       <-- ..................................................
EW732784       --> CTGGTCTGGGTCTTGCTTTATTCATCGTCCTCTTCATTGCCAAAAACTGG
FD957988       --> CTGGTCTGGGTCTTGCTTTATTCATCGTCCTCTTCATTGCCAAAAACTGG
EY938388       --> CTGGTCTGGGTCTTGCTTTATTCATCGTCCTCTTCATTGCCAAAAACTGG
FD557758       --> CTGGTCTGG.........................................
EY941227       --> CTGGTCTGGGTCTTGCTTTATTCATCGTCCTCTTCATTGCCAAAAACTGG
EY931012       --> CTGGTCTGGGTCTTGCTTTATTCATCGTCCTCTTCATTGCCAAAAACTGG
FD550974       --> CTGGTCTGGGTCTTGCTTTATTCATCGTCCTCTTCATTGCCAAAAACTGG
FD937768       --> CTGGTCTGGGTCTTGCTTTATTCATCGTCCTCTTCATTGCCAAAAACTGG
EV527718       --> CTGGTCTGGGTCTTGCTTTATTCATCGTCCTCTTCATTGCCAAAAATTGG

               501    -    551
UN16040        --> ACGCTTCGAGGTCTTTGTATAGGTTTCATAGTCTTCCTCGCTATCATTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531898       <-- ACGCTTCGAGGTCTTTGTATAGGTTTCATAGTCTTCCTCGCTATCATTTG
EW737213       <-- ACGCTTCGAGGTCTTTGTATAGGTTTCATAGTCTTCCTCGCTATCATTTG
EY927067       <-- ACGCTTCGAGGTCTTTGTATAGGTTTCATAGTCTTCCTCGCTATCATTTG
EY934543       <-- ACGCTTCGAGGTCTTTGTATAGGTTTCATAGTCTTCCTCGCTATCATTTG
FD546862       <-- ACGCTTCGAGGTCTTTGTATAGGTTTCATAGTCTTCCTCGCTATCATTTG
FD934318       <-- ACGCTTCGAGGTCTTTGTATAGGTTTCATAGTCTTCCTCGCTATCATTTG
FD953580       <-- ACGCTTCGAGGTCTTTGTATAGGTTTCATAGTCTTCCTCGCTATCATTTG
EY936852       <-- ..................................................
EW732784       --> ACGCTTCGAGGTCTTTGTATAGGTTTCATAGTCTTCCTCGCTATCATTTG
FD957988       --> ACGCTTCGAGGTCTTTGTATAGGTTTCATAGTCTTCCTCGCTATCATTTG
EY938388       --> ACGCTTCGAGGTCTTTGTATAGGTTTCATAGTCTTCCTCGCTATCATTTG
FD557758       --> ..................................................
EY941227       --> ACGCTTCGAGGTCTTTGTATAGGTTTCATAGTCTTCCTCGCTATCATTTG
EY931012       --> ACGCTTCGAGGTCTTTGTATAGGTTTCATAGTCTTCCTCGCTATCATTTG
FD550974       --> ACGCTTCGAGGTCTTTGTATAGGTTTCATAGTCTTCCTCGCTATCATTTG
FD937768       --> ACGCTTCGAGGTCTTTGTATAGGTTTCATAGTCTTCCTCGCTATCATTTG
EV527718       --> ACGCTTCGAGGTCTTTGTATAGGTTTCATAGTCTTCCTCGCTATCATTTG

               551    -    601
UN16040        --> GGTTCTACAAGAGTTAACTACTGTCAAAATACTCCGTTATGTCATTCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531898       <-- GGTTCTACAAGAGTTAACTACTGTCAAAATACTCCGTTATGTCATTCTCT
EW737213       <-- GGTTCTACGAGAGTTAACTACTGTCAAAATACTCCGTTATGTCATTCTCT
EY927067       <-- GGTTCTGCAAGAGTTAACTACTGTCAAAATACTCCGTTATGTCATTCTCT
EY934543       <-- GGTTCTACAAGAGTTAACTACTGTCAAAATACTCCGTTATGTCATTCTCT
FD546862       <-- GGTTCTACAAGAGTTAACTACTGTCAAAATACTCCGTTATGTCATTCTCT
FD934318       <-- GGTTCTACAAGAGTTAACTACTGTCAAAATACTCCGTTATGTCATTCTCT
FD953580       <-- GGTTCTACAAGAGTTAACTACTGTCAAAATACTCCGTTATGTCATTCTCT
EY936852       <-- ..................................................
EW732784       --> GGTTCTACGAGAGTTAACTACTGTCAAAATACTCCGTTATGTCATTCTCT
FD957988       --> GGTTCTACAAGAGTTAACTACTGTCAAAATACTCCGTTATGTCATTCTCT
EY938388       --> GGTTCTACAAGAGTTAACTACTGTCAAAATACTCCGTTATGTCATTCTCT
FD557758       --> ..................................................
EY941227       --> GGTTCTACAAGAGTTAACTACTGTCAAAATACTCCGTTATGTCATTCTCT
EY931012       --> GGTTCTGCAAGAGTTAACTACTGTCAAAATACTCCGTTATGTCATTCTCT
FD550974       --> GGTTCTACAAGAGTTAACTACTGTCAAAATACTCCGTTATGTCATTCTCT
FD937768       --> GGTTCTACAAGAGTTAACTACTGTCAAAATACTCCGTTATGTCATTCTCT
EV527718       --> GGTTCTACAAGAGTTAACTACTGTCAAAATACTCCGTTATGTCATTCTCT

               601    -    651
UN16040        --> TCATTGGTGTAATGAACAGCTTATTCTCAGTTTACGATATCTATGATGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531898       <-- TCATTGGTGTGATGAATAGCTTATTCTCAGTTTACGATATCTATGATGAT  Raphanus raphanistrum subsp. maritimus
EW737213       <-- TCATTGGTGTAATGAACAGCTTATTCTCAGTTTACGATATCTATGATGAT  Raphanus sativus cv Rat-Tail Radish #3870
EY927067       <-- TCATTGGTGTAATGAACAGCTTATTCTCAGTTTACGATATCTATGATGAT  Raphanus sativus var. oleiformis
EY934543       <-- TCATTGGTGTAATGAACAGCTTATTCTCAGTTTACGATATCTATGATGAT  Raphanus sativus cv Early Scarlet Globe
FD546862       <-- TCATTGGTGTAATGAACAGCTTATTCTCAGTTTACGATATCTATGATGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD934318       <-- TCATTGGTGTGATGAATAGCTTATTCTCAGTTTACGATATCTATGATGAT  Raphanus sativus var. oleiformis
FD953580       <-- TCATTGGTGTAATGAACAGCTTATTCTCAGTTTACGATATCTATGATGAT  Raphanus sativus cv Rat-Tail Radish #3870
EY936852       <-- .....GGTGTAATGAACAGCTTATTCTCAGTTTACGATATCTATGATGAT  Raphanus sativus cv Early Scarlet Globe
EW732784       --> TCATTGGTGTAATGAACAGCTTATTCTCAGTTTACGATATCTATGATGAT  Raphanus sativus cv Rat-Tail Radish #3870
FD957988       --> TCATTGGTGTAATGAACAGCTTATTCTCAGTTTACGATATCTATGATGAT  Raphanus sativus cv Rat-Tail Radish #3870
EY938388       --> TCATTGGTGTAATGAACAGCTTATTCTCAGTTTACGATATCTATGATGAT  Raphanus sativus cv Early Scarlet Globe
FD557758       --> ..................................................  Raphanus raphanistrum subsp. landra
EY941227       --> TCATTGGTGTAATGAACAGCTTATTCTCAGTTTACGATATCTATGATGAT  Raphanus sativus cv Early Scarlet Globe
EY931012       --> TCATTGGTGTAATGAACAGCTTATTCTCAGTTTACGATATCTATGATGAT  Raphanus sativus var. oleiformis
FD550974       --> TCATTGGTGTAATGAACAGCTTATTCTCAGTTTACGATATCTATGATGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD937768       --> TCATTGGTGTGATGAATAGCTTATTCTCAGTTTACGATATCTATGATGAT  Raphanus sativus var. oleiformis
EV527718       --> TCATTGGTGTGATGAATAGCTTATTCTCAGTTTACGATATCTATGATGAT  Raphanus raphanistrum subsp. maritimus

               651    -    701
UN16040        --> CTGATATCACGGAGAGTCCACTCAAGCGATGCTGAGAAGTTTGCAGAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531898       <-- CTGATATCACGGAGAGTCCACTCAAGCGATGCTGAGAAGTTTGCAGAGAT
EW737213       <-- CTGATATCACGGAGAGTCCACTCAAGCGATGCTGAGAAGTTTGCAGAGAT
EY927067       <-- CTGATATCACGGAGAGTCCACTCAAGCGGCGCTGAGAAGTTTGCAGAGAT
EY934543       <-- CTGATATCACGGAGAGTCCACTCAAGCGATGCTGAGAAGTTTGCAGAGAT
FD546862       <-- CTGATATCACGGAGAGTCCACTCAAGCGATGCTGAGAAGTTTGCAGAGAT
FD934318       <-- CTGATATCACGGAGAGTCCACTCAAGCGATGCTGAGAAGTTTGCAGAGAT
FD953580       <-- CTGATATCACGGAGAGTCCACTCAAGCGATGCTGAGAAGTTTGCAGAGAT
EY936852       <-- CTGATATCACGGAGGGTCCACTCAAGCGATGCTGAGAAGTTTACAGAGAT
EW732784       --> CTGATATCACGGAGAGTCCACTCAAGCGATGCTGAGAAGTTTGCAGAGAT
FD957988       --> CTGATATCACGGAGAGTCCACTCAAGCGATGCTGAGAAGTTTGCAGAGAT
EY938388       --> CTGATATCACGGAGAGTCCACTCAAGCGATGCTGAGAAGTTTGCAGAGAT
FD557758       --> ..................................................
EY941227       --> CTGATATCACGGAGGGTCCACTCAAGCGATGCTGAGAAGTTTACAGAGAT
EY931012       --> CTGATATCACGGAGAGTCCACTCAAGCGGCGCTGAGAAGTTTGCAGAGAT
FD550974       --> CTGATATCACGGAGAGTCCACTCAAGCGATGCTGAGAAGTTTGCAGAGAT
FD937768       --> CTGATATCACGGAGAGTCCAC.............................
EV527718       --> CTGATATCACGGAGAGTCCACTCAAGCGATGCTGAGAAGTTTGCAGAGAT

               701    -    751
UN16040        --> CTGTCCTTGCTGCACTGGTTGTGG-CTGGGGTGTCATATGGGGAATGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531898       <-- CTGTCCTTGCTGCACTGGTTGTGG-CTGGGGTGTCATTTGGGGAATGATA
EW737213       <-- CTGTCCTTGCTGCACTGGTTGTGG-CTGGGGTGTCATATGGGGAATGATA
EY927067       <-- CTGTCCTTGCTGCACTGGTTGTGG-CTGGGGTGTCATATGGGGAATGATA
EY934543       <-- CTGTCCTTGCTGCACTGGTTGTGG-CTGGGGTGTCATATGGGGAATGATA
FD546862       <-- CTGTCCTTGCTGCACTGGTTGTGG-CTGGGGTGTCATATGGGGAATGATA
FD934318       <-- CTGTCCTTGCTGCACTGGTTGTGG-CTGGGGTGTCATTTGGGGAATGATA
FD953580       <-- CTGTCCTTGCTGCACTGGTTGTGG-CTGGGGTGTCATATGGGGAATGATA
EY936852       <-- CTGTCCTTGCTGCACTGGTTGTGG-CTGGGGTGTCATATGGGGAATGATA
EW732784       --> CTGTCCTTGCTGCACTGGTTGTGG-CTGGGGTGTCATATGGGGAATGATA
FD957988       --> CTGTCCTTGCTGCACTGGTTGTGG-CTGGGGTGTCATATGGGGAATGATA
EY938388       --> CTGTCCTTGCTGCACTGGTTGTGG-CTGGGGTGTCATATGGGGAATGAT.
FD557758       --> ..................................................
EY941227       --> CTGTCCTTGCTGCACTGGTTGTGG-CTGGGGTGTCATATGGGGAATGATA
EY931012       --> CTGTCCTTGCTGCACTGGTTGTGG-CTGGGGTGTCATATGGGGAATGATA
FD550974       --> CTGTCCTTGCTGCACTGGTTGTGGGCTGGG....................
FD937768       --> ..................................................
EV527718       --> CTGTCCTTGCTGCACTGGTTGTGG-CTGGGGTGTCATTTGGGGAATGATA

               751    -    801
UN16040        --> TCATTTATGTTTCTTTGCGCGTCTCTGTATCTTGGGCTTGTGATCCTATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531898       <-- TCATTTATGTTTCTTTGCGCGTCGCTGTATCTTGGGCTTGTGATCCTATC
EW737213       <-- TCATTTATGTTTCTTTGCGCGTCTCTGTATCTTGGGCTTGTGATCCTATC
EY927067       <-- TCATTTATGTTTCTTTGCGCGTCTCTGTATCTTGGGCTTGTGATCCTATC
EY934543       <-- TCATTTATGTTTCTTTGCGCGTCTCTGTATCTTGGGCTTGTGATCCTATC
FD546862       <-- TCATTTATGTTTCTTTGCGCGTCTCTGTATCTTGGGCTTGTGATCCTATC
FD934318       <-- TCATTTATGTTTCTTTGCGCGTCTCTGTATCTTGGGCTTGTGATCCTATC
FD953580       <-- TCATTTATGTTTCTTTGCGCGTCTCTGTATCTTGGGCTTGTGATCCTATC
EY936852       <-- TCATTTATGTTTCTTTGCGCGTCTCTGTATCTTGGGCTTGTGATCCTATC
EW732784       --> TCATTTATGTTTCTTTGCGCGTCTCTGTATCTTGGGCTTGTGATCCTAT.
FD957988       --> TCATTTATGTTTCTTTGCGCGTCTCTGTATCTTGGGCTTGTGATC-TATC
EY938388       --> ..................................................
FD557758       --> ..................................................
EY941227       --> TCATTTATGTTTCTTTGCGCGTCTCTGTATCTTGGGCTTGTGATCCTATC
EY931012       --> TCATTTATGTTTCTTTGCGCGTCTCTGTATCTTGGGCTTGTGATCCTATC
FD550974       --> ..................................................
FD937768       --> ..................................................
EV527718       --> TCATTTATGTTTCTTTGCGCGTCGCTGTATCTTGGGCTTGTGATCCTATC

               801    -    851
UN16040        --> ATAGAGAAAGGTTCAGATTCTTCCCAGTGAAATTCAGAGATTCTTATCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531898       <-- ATAGAGAAAGGTTCAGATTCTTCCCAGTGAAATGCAGAGATTCTTATCTA
EW737213       <-- ATAGAGAAAGGTTCAGATTCTTCCCAGTGAAATTCAGAGATTCTTATCTA
EY927067       <-- ATAGAGAAAGGTTCAGATTCTTCCCAGTGAAATTCAGAGATTCTTATCTA
EY934543       <-- ATAGAGAAAGGTTCAGATTCTTCCCAGTGAAATTCAGAGATTCTTATCTA
FD546862       <-- ATAGAGAAAGGTTCAGATTCTTCCCAGTGAATTTCAGAGATTCTTATCTA
FD934318       <-- ATAGAGAAAGGTTCAGATTCTTCCCAGTGAAATGCAGAGATTCTTATCTA
FD953580       <-- ATAGAGAAAGGTTCAGATTCTTCCCAGTGAAATTCAGAGATTCTTATCTA
EY936852       <-- ATAGAGAAAGGTTCAGATTCTTCCCAGTGAAATTCAGAGATTCTTATCTA
EW732784       --> ..................................................
FD957988       --> ATAGAAAAA.........................................
EY938388       --> ..................................................
FD557758       --> ..................................................
EY941227       --> ATAGA.............................................
EY931012       --> ATAGAAAAA.........................................
FD550974       --> ..................................................
FD937768       --> ..................................................
EV527718       --> ATAGAG............................................

               851    -    901
UN16040        --> TCATCAATGCGCAGTTAACAATAGTTTGATTCTTTAAGATCCCTTTGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531898       <-- TCATCAATGCGCAGTTAACAATAGTTTGATTCTTTAAGATCCCTTTGTGT
EW737213       <-- TCATCAATGCGCAGTTAACAATAGTTTGATTCTTTAAGATCCCTTTGTGT
EY927067       <-- TCATCAATGCGCAGTTAACAATAGTTTGATTCTTTAAGATCCCTTTGTGT
EY934543       <-- TCATCAATGCGCAGTTAACAATAGTTTGATTCTTTAAGATCCCTTTGTGT
FD546862       <-- TCATCAATGCGCAGTTAACAATAGTTTGATTCTTTAAGATCCCTTTGTGT
FD934318       <-- TCATCAATGCGCAGTTAACAATAGTTTGATTCTTTAAGATCCCTTTGTGT
FD953580       <-- TCATCAATGCGCAGTTAACAATAGTTTGATTCTTTAAGATCCCTTTGTGT
EY936852       <-- TCATCAATGCGCAGTTAACAATAGTTTGATTCTTTAAGATCCCTTTGTGT
EW732784       --> ..................................................
FD957988       --> ..................................................
EY938388       --> ..................................................
FD557758       --> ..................................................
EY941227       --> ..................................................
EY931012       --> ..................................................
FD550974       --> ..................................................
FD937768       --> ..................................................
EV527718       --> ..................................................

               901    -    951
UN16040        --> GTGTGTTGGGATTTACATTTGATTGAAAGTTTAGGATTTATTTGAAAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531898       <-- GTG--TTGGGATTTACATTTGATTGAAAGTTTAGGATTTATTTGAAAAGT
EW737213       <-- GTGTGTTGGGATTTACATTTGATTGAAAGTTTAGGATTTATTTGAAAAGT
EY927067       <-- GTGTGTTGGGATTTACATTTGATTGAAAGTTTAGGATTTATTTGAAAAGT
EY934543       <-- GTGTGTTGGGATTTACATTTGATTGAAAGTTTAGGATTTATTTGAAAAGT
FD546862       <-- GTGTGTTGGGATTTACATTTGATTGAAAGTTTAGGATTTATTTGAAAAGT
FD934318       <-- GTG--TTCGGATTTACATTTGATTGAAAGTTTAGGATTTATTTGAAAAGT
FD953580       <-- GTGTGTTGGGATTTACATTTGATTGAAAGTTTAGGATTTATTTGAAAAGT
EY936852       <-- GTGTGTTGGGATTTACATTTGATTGAAAGTTTAGGATTTATTTGAAAAGT
EW732784       --> ..................................................
FD957988       --> ..................................................
EY938388       --> ..................................................
FD557758       --> ..................................................
EY941227       --> ..................................................
EY931012       --> ..................................................
FD550974       --> ..................................................
FD937768       --> ..................................................
EV527718       --> ..................................................

               951    -   1001
UN16040        --> TTGTATTCTTATTCTTGTTTGACGTGTATTGACTACAACTCATTGATTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531898       <-- TTGTATGCTTATTCTTGTTTGACGTGTATTGACTACAACTCATTGATTGG
EW737213       <-- TTGTATTCTTATTCTTGTTTGACGTGTATTGACAACAACTCATTGATTGG
EY927067       <-- TTGTATTCTTATTCTTGTTTGACGTGTATTGACTACAACTCATTGATTGG
EY934543       <-- TTGTATTCTTATTCTTGTTTGACGTGTATTGACTACAACTCATTGATTGG
FD546862       <-- TTGTATTCTTATTCTTGTTTGACGTGTATTGACTACAACTCATTGATTGG
FD934318       <-- TTGTATGCTTATTCTTGTTTGACGTGTATTGACTACAACTCATTGATTGG
FD953580       <-- TTGTATTCTTATTCTTGTTTGACGTGTATTGACTACAACTCATTGATTGG
EY936852       <-- TTGTATTCTTATTCTTGTTTGACGTGTATTGACTACAACTCATTGATTGG
EW732784       --> ..................................................
FD957988       --> ..................................................
EY938388       --> ..................................................
FD557758       --> ..................................................
EY941227       --> ..................................................
EY931012       --> ..................................................
FD550974       --> ..................................................
FD937768       --> ..................................................
EV527718       --> ..................................................

               1001   -   1051
UN16040        --> TCTGTTTAATACATCGTTTAAGAAAAGTACGGTGACTTCTGGCAAAGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531898       <-- TCTGTTTAATACATCGTTTAAAAAAgaaaaaattgc..............
EW737213       <-- TCTGTTTAATACATCGTTTAAGAAAAGTACGGTGACTTCTGGC.......
EY927067       <-- TCTGTTTAATACATCGTTTAAGAAAAGTACGGTGACTTCTGGTAAAGCTT
EY934543       <-- TCTGTTTAATACATCGTTT...............................
FD546862       <-- TCTGTTTAATACATCGTTTAAGAAAAGTACGGTGACTTC...........
FD934318       <-- TCTGTTTAATAgtacatcgttt............................
FD953580       <-- TCTGTTTAATACATCGTTTAAGt...........................
EY936852       <-- TCTGTTTAATACATCGTTTAAGAAAAGTACGGTGACTTCTGGC.......
EW732784       --> ..................................................
FD957988       --> ..................................................
EY938388       --> ..................................................
FD557758       --> ..................................................
EY941227       --> ..................................................
EY931012       --> ..................................................
FD550974       --> ..................................................
FD937768       --> ..................................................
EV527718       --> ..................................................

               1051   -   1101
UN16040        --> CTCCTTCTCG
                   ~~~~~~~~~~
EV531898       <-- ..........
EW737213       <-- ..........
EY927067       <-- CTCCTTCTCG
EY934543       <-- ..........
FD546862       <-- ..........
FD934318       <-- ..........
FD953580       <-- ..........
EY936852       <-- ..........
EW732784       --> ..........
FD957988       --> ..........
EY938388       --> ..........
FD557758       --> ..........
EY941227       --> ..........
EY931012       --> ..........
FD550974       --> ..........
FD937768       --> ..........
EV527718       --> ..........